Carg24933 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24933
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Membrane-associated kinase regulator
Location	Cucurbita_argyrosperma_scaffold_227 : 427666 .. 428487 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAATGGCGATCGAAGTTTTCTCTGAGATTTCTACTGTAGGAATCAGTCCTCGAATCTCGTTTTCGCATGATCTCAACCAGGCCGATTTGTTGCCTTCTTCTTCTGATTGCAATCGCGAGCGTTTGGACTTGACTCTTCTCGAATCCGACTTCGATTTCTGCATCGGCAATCTTCTTAGGCAAGATCTCTCCTCCGCCGACGAACTTTTCTCCAATGGCAAAATTCTCCCCGTCGAAATCAAGAAATCGATCGAGCCAAACAGAGAAGTTCTTAAACCTATCCAATCTCCTCCTCCTCCTCCAGTTCCTCCCGATCCTGCCAGAAATTCTGTCTCCTCCGAGAAGAAGAGCCTCAAAGAGCTTCTCTCCGCCAGTTTCGATGCCGATGAGAAACCGCAATCCAAATCCTTCTGGCAGTTCAAGCGAAGCAGTAGTCTAAATTGCGAAAGCTCCAAGAGTAGGAGTTTGATTCGATCCTTGCATTTCCTCTCGAGAAGCAACTCCACTGGTTCGGCTTTGAATCCGAAATCGCAATCGACTTCGAAGGATCCTCAGAAACCGAATTTGCAGAAACAGCCTTCGATTTCGAGTAGTAGAAGATCATCCACATCCATATCCACATCCGCAAACTCGTATTTCGCAAATTTGTCCTCTCAAAAGCCTTCAATGAGGAAGAATTCGGGACCGAACAATGGCAACGGAGTTCGAATCAGTCCTTTTCTCAATCTTCCTCCGCCATACATTTCCAAAGTAACTGTAAGTTTTTTCGGATTCGGTTCTCTGTTTTGCAATGGTAAGATTAAAAAGAAGAAGAAATGA

mRNA sequence

ATGCTAATGGCGATCGAAGTTTTCTCTGAGATTTCTACTGTAGGAATCAGTCCTCGAATCTCGTTTTCGCATGATCTCAACCAGGCCGATTTGTTGCCTTCTTCTTCTGATTGCAATCGCGAGCGTTTGGACTTGACTCTTCTCGAATCCGACTTCGATTTCTGCATCGGCAATCTTCTTAGGCAAGATCTCTCCTCCGCCGACGAACTTTTCTCCAATGGCAAAATTCTCCCCGTCGAAATCAAGAAATCGATCGAGCCAAACAGAGAAGTTCTTAAACCTATCCAATCTCCTCCTCCTCCTCCAGTTCCTCCCGATCCTGCCAGAAATTCTGTCTCCTCCGAGAAGAAGAGCCTCAAAGAGCTTCTCTCCGCCAGTTTCGATGCCGATGAGAAACCGCAATCCAAATCCTTCTGGCAGTTCAAGCGAAGCAGTAGTCTAAATTGCGAAAGCTCCAAGAGTAGGAGTTTGATTCGATCCTTGCATTTCCTCTCGAGAAGCAACTCCACTGGTTCGGCTTTGAATCCGAAATCGCAATCGACTTCGAAGGATCCTCAGAAACCGAATTTGCAGAAACAGCCTTCGATTTCGAGTAGTAGAAGATCATCCACATCCATATCCACATCCGCAAACTCGTATTTCGCAAATTTGTCCTCTCAAAAGCCTTCAATGAGGAAGAATTCGGGACCGAACAATGGCAACGGAGTTCGAATCAGTCCTTTTCTCAATCTTCCTCCGCCATACATTTCCAAAGTAACTGTAAGTTTTTTCGGATTCGGTTCTCTGTTTTGCAATGGTAAGATTAAAAAGAAGAAGAAATGA

Coding sequence (CDS)

ATGCTAATGGCGATCGAAGTTTTCTCTGAGATTTCTACTGTAGGAATCAGTCCTCGAATCTCGTTTTCGCATGATCTCAACCAGGCCGATTTGTTGCCTTCTTCTTCTGATTGCAATCGCGAGCGTTTGGACTTGACTCTTCTCGAATCCGACTTCGATTTCTGCATCGGCAATCTTCTTAGGCAAGATCTCTCCTCCGCCGACGAACTTTTCTCCAATGGCAAAATTCTCCCCGTCGAAATCAAGAAATCGATCGAGCCAAACAGAGAAGTTCTTAAACCTATCCAATCTCCTCCTCCTCCTCCAGTTCCTCCCGATCCTGCCAGAAATTCTGTCTCCTCCGAGAAGAAGAGCCTCAAAGAGCTTCTCTCCGCCAGTTTCGATGCCGATGAGAAACCGCAATCCAAATCCTTCTGGCAGTTCAAGCGAAGCAGTAGTCTAAATTGCGAAAGCTCCAAGAGTAGGAGTTTGATTCGATCCTTGCATTTCCTCTCGAGAAGCAACTCCACTGGTTCGGCTTTGAATCCGAAATCGCAATCGACTTCGAAGGATCCTCAGAAACCGAATTTGCAGAAACAGCCTTCGATTTCGAGTAGTAGAAGATCATCCACATCCATATCCACATCCGCAAACTCGTATTTCGCAAATTTGTCCTCTCAAAAGCCTTCAATGAGGAAGAATTCGGGACCGAACAATGGCAACGGAGTTCGAATCAGTCCTTTTCTCAATCTTCCTCCGCCATACATTTCCAAAGTAACTGTAAGTTTTTTCGGATTCGGTTCTCTGTTTTGCAATGGTAAGATTAAAAAGAAGAAGAAATGA

Protein sequence

MLMAIEVFSEISTVGISPRISFSHDLNQADLLPSSSDCNRERLDLTLLESDFDFCIGNLLRQDLSSADELFSNGKILPVEIKKSIEPNREVLKPIQSPPPPPVPPDPARNSVSSEKKSLKELLSASFDADEKPQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSALNPKSQSTSKDPQKPNLQKQPSISSSRRSSTSISTSANSYFANLSSQKPSMRKNSGPNNGNGVRISPFLNLPPPYISKVTVSFFGFGSLFCNGKIKKKKK

Homology

[Close]

BLAST of Carg24933 vs. NCBI nr
Match: XP_022939173.1 (uncharacterized protein LOC111445167 [Cucurbita moschata])

HSP 1 Score: 469.9 bits (1208), Expect = 5.8e-129
Identity = 269/271 (99.26%), Postives = 270/271 (99.63%), Query Frame = 0


Query: 3   MAIEVFSEISTVGISPRISFSHDLNQADLLPSSSDCNRERLDLTLLESDFDFCIGNLLRQ 62
           MAIEV SEISTVGISPRISFSHDLNQADLLPSSSDCNRERLDLTLLESDFDFCIGNLLRQ
Sbjct: 1   MAIEVCSEISTVGISPRISFSHDLNQADLLPSSSDCNRERLDLTLLESDFDFCIGNLLRQ 60

Query: 63  DLSSADELFSNGKILPVEIKKSIEPNREVLKPIQSPXXXXXXXXXXXXXXXSEKKSLKEL 122
           DLSSADELFSNGKILPVEIKKSIEPNREVLKPIQSPXXXXXXXXXXXXXXXSEKKSLKEL
Sbjct: 61  DLSSADELFSNGKILPVEIKKSIEPNREVLKPIQSPXXXXXXXXXXXXXXXSEKKSLKEL 120

Query: 123 LSASFDADEKPQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSALNPKSQSTS 182
           LSASFDADEKPQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSALNPKSQSTS
Sbjct: 121 LSASFDADEKPQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSALNPKSQSTS 180

Query: 183 KDPQKPNLQKQPSISSSRRSSTSISTSANSYFANLSSQKPSMRKNSGPNNGNGVRISPFL 242
           KDPQ+PNLQKQPSISSSRRSSTSISTSANSYFANLSSQKPSMRKNSGPNNGNGVRISPFL
Sbjct: 181 KDPQRPNLQKQPSISSSRRSSTSISTSANSYFANLSSQKPSMRKNSGPNNGNGVRISPFL 240

Query: 243 NLPPPYISKVTVSFFGFGSLFCNGKIKKKKK 274
           NLPPPYISKVTVSFFGFGSLFCNGKIKKKKK
Sbjct: 241 NLPPPYISKVTVSFFGFGSLFCNGKIKKKKK 271

[Close]

BLAST of Carg24933 vs. NCBI nr
Match: XP_023550641.1 (uncharacterized protein LOC111808723 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 429.5 bits (1103), Expect = 8.6e-117
Identity = 235/265 (88.68%), Postives = 238/265 (89.81%), Query Frame = 0


Query: 3   MAIEVFSEISTVGISPRISFSHDLNQADLLPSSSDCNRERLDLTLLESDFDFCIGNLLRQ 62
           MAIEV SEISTVGISPRISFSHDLNQADLLPSSSDCNRERLDL+LLESDFDFCIGNLLRQ
Sbjct: 1   MAIEVCSEISTVGISPRISFSHDLNQADLLPSSSDCNRERLDLSLLESDFDFCIGNLLRQ 60

Query: 63  DLSSADELFSNGKILPVEIKKSIEPNREVLKPIQSPXXXXXXXXXXXXXXXSEKKSLKEL 122
           DLSSADELFSNGKILPVEIKKSIEPNREVLKPIQSP               SEKKSLKEL
Sbjct: 61  DLSSADELFSNGKILPVEIKKSIEPNREVLKPIQSPPPSPVPPDPARNSVSSEKKSLKEL 120

Query: 123 LSASFDADEKPQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSALNPKSQSTS 182
           LSASFDADEKPQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSALNPKSQSTS
Sbjct: 121 LSASFDADEKPQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSALNPKSQSTS 180

Query: 183 KDPQKPNLQKQPSISSSRR--SSTSISTSANSYFANLSSQKPSMRKNSGPNNGNGVRISP 242
           KDPQ+PNLQKQPSISSSRR           NSYFANLSSQKPS+RKNSGPNNGNGVRISP
Sbjct: 181 KDPQRPNLQKQPSISSSRRXXXXXXXXXXXNSYFANLSSQKPSVRKNSGPNNGNGVRISP 240

Query: 243 FLNLPPPYISKVTVSFFGFGSLFCN 266
           FLNLPPPYISKVTVSFFGFGSLFCN
Sbjct: 241 FLNLPPPYISKVTVSFFGFGSLFCN 265

[Close]

BLAST of Carg24933 vs. NCBI nr
Match: XP_022993317.1 (uncharacterized protein LOC111489360 [Cucurbita maxima])

HSP 1 Score: 423.7 bits (1088), Expect = 4.7e-115
Identity = 229/251 (91.24%), Postives = 234/251 (93.23%), Query Frame = 0


Query: 3   MAIEVFSEISTVGISPRISFSHDLNQADLLPSSSDCNRERLDLTLLESDFDFCIGNLLRQ 62
           MAIEV SEISTVGISPRISFSHDLNQADLLPSSSDCNRERLDLTLLESDFDFCIGNLLRQ
Sbjct: 1   MAIEVCSEISTVGISPRISFSHDLNQADLLPSSSDCNRERLDLTLLESDFDFCIGNLLRQ 60

Query: 63  DLSSADELFSNGKILPVEIKKSIEPNREVLKPIQSPXXXXXXXXXXXXXXXSEKKSLKEL 122
           DLSSADELFSNGKILP+EIKKSIEPNRE LKPIQSP               SEKKSLKEL
Sbjct: 61  DLSSADELFSNGKILPIEIKKSIEPNREFLKPIQSPPPPLVPPDPARNSVSSEKKSLKEL 120

Query: 123 LSASFDADEKPQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSALNPKSQSTS 182
           LSASFDADEKPQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSALNPKSQSTS
Sbjct: 121 LSASFDADEKPQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSALNPKSQSTS 180

Query: 183 KDPQKPNLQKQPSISSSRRSSTSISTSANSYFANLSSQKPSMRKNSGPNNGNGVRISPFL 242
           KDPQ+PN+QKQPSISSSRRSSTSISTSANSYFANLS+QKPS+RKNSGPNNGNGVRISPFL
Sbjct: 181 KDPQRPNMQKQPSISSSRRSSTSISTSANSYFANLSTQKPSVRKNSGPNNGNGVRISPFL 240

Query: 243 NLPPPYISKVT 254
           NLPPPYISKVT
Sbjct: 241 NLPPPYISKVT 251

[Close]

BLAST of Carg24933 vs. NCBI nr
Match: XP_022971829.1 (uncharacterized protein LOC111470497 isoform X2 [Cucurbita maxima])

HSP 1 Score: 364.8 bits (935), Expect = 2.6e-97
Identity = 219/272 (80.51%), Postives = 228/272 (83.82%), Query Frame = 0


Query: 3   MAIEVFSEISTVGISPRISFSHDLNQADLLPSSSDCNRERLDLTLLESDFDFCIGNLLRQ 62
           MAIEV SEIS+VGISPRISFSHDLNQAD LPSSSDCNR RLDL+LLESDFDFCIGNLL Q
Sbjct: 1   MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFCIGNLLLQ 60

Query: 63  DLSSADELFSNGKILPVEIKKSIEPNREVLKPIQSPXXXXXXXXXXXXXXXSEKKSLKEL 122
           DLSSADELF NGKILPVEIKKSIEPNREV KP QS      XXXXXXXX  SEKKSLKEL
Sbjct: 61  DLSSADELFCNGKILPVEIKKSIEPNREVSKPNQS--TPPIXXXXXXXXVSSEKKSLKEL 120

Query: 123 LSASFDADEKPQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSALNPKSQSTS 182
           LSASFDA+EKPQSKSFWQFKRSSSLNCESSKSR LIRSLHFLSRSNSTGSAL        
Sbjct: 121 LSASFDAEEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSAL-------- 180

Query: 183 KDPQKPNLQKQPSISSSRRSSTSISTSANSYFANLSSQKPSMRKNSGPNNGNGVRI-SPF 242
                 NLQKQPSISS +   +S+S+ +NSYFAN  SQKPS R+N G NNGNGVRI SP 
Sbjct: 181 ------NLQKQPSISSRK---SSVSSCSNSYFANSCSQKPSTRRNFGANNGNGVRIMSPL 240

Query: 243 LNLPPPYISKVTVSFFGFGSLFCNGKIKKKKK 274
           LNLPPPYISKVTVSFFGFGSLFCNGK KKK K
Sbjct: 241 LNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 253

[Close]

BLAST of Carg24933 vs. NCBI nr
Match: XP_022971826.1 (uncharacterized protein LOC111470497 isoform X1 [Cucurbita maxima])

HSP 1 Score: 359.4 bits (921), Expect = 1.1e-95
Identity = 219/280 (78.21%), Postives = 229/280 (81.79%), Query Frame = 0


Query: 3   MAIEVFSEISTVGISPRISFSHDLNQADLLPSSSDCNRERLDLTLLESDFDFCIGNLLRQ 62
           MAIEV SEIS+VGISPRISFSHDLNQAD LPSSSDCNR RLDL+LLESDFDFCIGNLL Q
Sbjct: 1   MAIEVCSEISSVGISPRISFSHDLNQADSLPSSSDCNRGRLDLSLLESDFDFCIGNLLLQ 60

Query: 63  DLSSADELFSNGKILPVEIKKSIEPNREVLKPIQSPXXXXXXXXXXXXXXXSEKKSLKEL 122
           DLSSADELF NGKILPVEIKKSIEPNREV KP QS      XXXXXXXX  SEKKSLKEL
Sbjct: 61  DLSSADELFCNGKILPVEIKKSIEPNREVSKPNQS--TPPIXXXXXXXXVSSEKKSLKEL 120

Query: 123 LSASFDADEKPQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSAL-------- 182
           LSASFDA+EKPQSKSFWQFKRSSSLNCESSKSR LIRSLHFLSRSNSTGSAL        
Sbjct: 121 LSASFDAEEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSALXXXXXXXX 180

Query: 183 NPKSQSTSKDPQKPNLQKQPSISSSRRSSTSISTSANSYFANLSSQKPSMRKNSGPNNGN 242
                        P+LQKQPSISS +   +S+S+ +NSYFAN  SQKPS R+N G NNGN
Sbjct: 181 XXXXXXXXXXXXXPSLQKQPSISSRK---SSVSSCSNSYFANSCSQKPSTRRNFGANNGN 240

Query: 243 GVRI-SPFLNLPPPYISKVTVSFFGFGSLFCNGKIKKKKK 274
           GVRI SP LNLPPPYISKVTVSFFGFGSLFCNGK KKK K
Sbjct: 241 GVRIMSPLLNLPPPYISKVTVSFFGFGSLFCNGKNKKKNK 275

[Close]

BLAST of Carg24933 vs. TAIR10
Match: AT1G68330.1 (unknown protein)

HSP 1 Score: 132.5 bits (332), Expect = 4.0e-31
Identity = 139/284 (48.94%), Postives = 170/284 (59.86%), Query Frame = 0


Query: 3   MAIEV-FSEISTVGISPRISFSHDLNQADLLPSSSDCNRERLDLTLLE--SDFDFCIGNL 62
           MAI+V  SE S  GISPRISFS+DL+       S+D    RLD TLL+  S+FDFC G+ 
Sbjct: 1   MAIDVCCSEASGSGISPRISFSYDLD-------STDDGEVRLDSTLLDSGSEFDFCFGSS 60

Query: 63  LR-QDLSSADELFSNGKILPVEIKKSIE-PNREVLKPIQS----PXXXXXXXXXXXXXXX 122
              Q++S ADELFS GKILPV+IKK    P     +  +S     XXXXXXXXXXXXXXX
Sbjct: 61  CSVQEVSPADELFSEGKILPVQIKKEESLPQTVTFRVPRSAXXXXXXXXXXXXXXXXXXX 120

Query: 123 SEKKSLKE-LLSASFDADEKPQSKSFWQFKRSSSLNCESSK-SRSLIRSLHFLSRSNSTG 182
                LKE LL+   D ++KP+   F QFKRS SLN + S+ S+ LIRS HFLSRSNST 
Sbjct: 121 XXXMRLKELLLNPESDFEDKPRG-LFLQFKRSISLNYDKSRNSKGLIRSFHFLSRSNSTP 180

Query: 183 SALNPKSQSTSKDPQKPN-LQKQPSISSSRRSSTSISTSANSYFANLSSQKPSMRKNSGP 242
              NP      K+   P+     P      R S+S+S+S+  ++    S+KP  R + G 
Sbjct: 181 ---NPNLDLLPKETHHPHKTHNLPKHKPPLRRSSSLSSSSVPFY----SKKPLGRNSFGN 240

Query: 243 NNGNGVRISPFLNLPPP-YISKVTVSFFGFGSLFCNGKIKKKKK 274
            NG GVR+SP LN PPP +IS V   FF  GSL CNGK   K K
Sbjct: 241 GNG-GVRVSPVLNFPPPAFISNVADGFFSIGSL-CNGKTNTKTK 267

[Close]

BLAST of Carg24933 vs. TAIR10
Match: AT1G48780.1 (unknown protein)

HSP 1 Score: 80.5 bits (197), Expect = 1.8e-15
Identity = 100/254 (39.37%), Postives = 127/254 (50.00%), Query Frame = 0


Query: 19  RISFSHDLNQADLLPSS--SDCNRERLDLTLLE---SDFDFCIGNLLRQ-DLSSADELFS 78
           RISFS DL Q+D  P          R D TLL+   SDF+F I N     D S ADE+F+
Sbjct: 9   RISFSSDLGQSDKAPPPVIEPSGLIRRDETLLDSSNSDFEFHISNSFDPGDSSPADEIFA 68

Query: 79  NGKILPVEI-KKSIEPNR---EVLKPIQSPXXXXXXXXXXXXXXXSEKKSLKELLSASFD 138
           +G ILP  +   S  P R     L PI S      XXXXXXX   SEK++      A+ D
Sbjct: 69  DGMILPFHVTAASTVPKRLYKYELPPITSSLSPSPXXXXXXXTKHSEKETNGRASGANSD 128

Query: 139 ADEKPQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSALNPKSQSTSKDPQKP 198
           ++ +  SKSFW FKRSSSLNC+  K  SLI S   L+RSNSTGS  N K ++  +D    
Sbjct: 129 SEAEKSSKSFWSFKRSSSLNCDIKK--SLICSFPRLTRSNSTGSVTNSK-RAMLRD---- 188

Query: 199 NLQKQPSISSSRRSSTSISTSANSYFANLSSQKPSMRKNSGPNNGNGVRISPFLNLPPPY 258
                  +++ R SS   S+  N+Y      QK + +K  G   G    + P LN P   
Sbjct: 189 -------VNNHRPSSR--SSCCNAY--QFRPQKHTGKKGEG---GGSFSVIPVLNGP--- 232

Query: 259 ISKVTVSFFGFGSL 263
                 S FG GS+
Sbjct: 249 ------STFGLGSI 232

[Close]

BLAST of Carg24933 vs. TAIR10
Match: AT1G67050.1 (unknown protein)

HSP 1 Score: 67.0 bits (162), Expect = 2.0e-11
Identity = 103/284 (36.27%), Postives = 128/284 (45.07%), Query Frame = 0


Query: 3   MAIEVFSEISTVGISPRISFSHDLNQADLLP------SSSDCNRERLDLTLLESDFDFCI 62
           MA+++ SE S   +SPRISFS D  Q+D +P       SS+     L+ ++   DFDFCI
Sbjct: 1   MAVDLLSENS--NMSPRISFSRDFCQSDAIPIEKRPLRSSNSKPSSLNSSI---DFDFCI 60

Query: 63  ------GNLLRQDLSSADELFSNGKILPVEIKKSIEPNREVLKPIQSPXXXXXXXXXXXX 122
                 G    Q   SADELFSNGKILP EIKK  E            XXXXXXXXXXXX
Sbjct: 61  PGGVNSGESFDQGSWSADELFSNGKILPTEIKKKPE------XXXXXXXXXXXXXXXXXX 120

Query: 123 XXXSEKKSLKELLSASFDADEKPQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNST 182
           XXX                     +KSFW FKRSSSLNC S+  RSL   L  L+RSN  
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXTNTKSFWGFKRSSSLNCGSTYGRSLC-PLPLLNRSNXX 180

Query: 183 GSALNPKSQSTSKDPQKPNLQKQPSISSSRRSSTSISTSANSYFANLSSQKPSMRKNSGP 242
                                                         L  +K     + G 
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPL--KKSYGGYSYGS 240

Query: 243 NNGNGVRISPFLNLPPPYISKVTVSFFGFGSLFC-NGKIKKKKK 274
           + G G+R+SP +N+ P      + + FGFGS+F  NG+ K KK+
Sbjct: 241 HGGGGIRVSPVINVVP------SGNLFGFGSMFSGNGRDKNKKR 264

[Close]

BLAST of Carg24933 vs. TAIR10
Match: AT3G18300.1 (unknown protein)

HSP 1 Score: 59.3 bits (142), Expect = 4.3e-09
Identity = 96/289 (33.22%), Postives = 120/289 (41.52%), Query Frame = 0


Query: 11  ISTVGISPRISFSHDLNQAD--LLPSSSDCNRERLDLTLLE---SDFDFCI-GNLLRQDL 70
           I T     R SF+ DL Q+D             R D TLL+   SDF+F I  N    D 
Sbjct: 2   ICTESNHQRFSFAGDLGQSDKGTPMEQQPSGPVRRDTTLLDSSNSDFEFHISSNFDPGDS 61

Query: 71  SSADELFSNGKILPV----EIKKSIEPNR---EVLKPIQS--PXXXXXXXXXXXXXXXSE 130
           S ADE+F++G ILPV        S  P R     L PI S                  S 
Sbjct: 62  SPADEIFADGMILPVLPFQVTATSTMPKRLYKYELPPIVSAPTLSSYLPPLPLPLPEHSR 121

Query: 131 KKSLKELLSA--------SFDADEKPQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRS 190
           K S+KE   +                 SKSFW FKRSSSLNC+  K  SLI S   L+RS
Sbjct: 122 KYSVKETRGSLNGRXXXXXXXXXXXKSSKSFWSFKRSSSLNCDIKK--SLICSFPRLTRS 181

Query: 191 NSTGSALNPKSQSTSKDPQKPNLQK----QPSISSSRRSSTSISTSANSYFANLSSQKPS 250
           NSTGS    K +   +D  K + Q+    +P ++ S       S   +SY      QK +
Sbjct: 182 NSTGSVAISKREML-RDINKHSSQRHGVPRPGVNPSSHMRPPSSFCCSSY--QFRPQKHA 241

Query: 251 MRKNSGPNNGNGVRISPFLNLPPPYISKVTVSFFGFGSLFCNGKIKKKK 273
            +   G   G    I+P +  P P         FG GS+    K KKKK
Sbjct: 242 GKNGGG--RGGSFWIAPVIGGPSP---------FGLGSILRLTKEKKKK 274

[Close]

BLAST of Carg24933 vs. TAIR10
Match: AT5G38320.1 (unknown protein)

HSP 1 Score: 44.3 bits (103), Expect = 1.4e-04
Identity = 28/75 (37.33%), Postives = 43/75 (57.33%), Query Frame = 0


Query: 17 SPRISFSHDLNQADLLPSSSDCNRERLDLTLLESDF--DFCI--GNLLRQDLSSADELFS 76
          SPRISFS+D    + +P     ++   D++     F  +F I  G +  +   SA+E F+
Sbjct: 8  SPRISFSNDFCHHESIPIEQRTSQSPYDISNFYWGFPLEFSIPRGAISGESSWSAEEFFN 67

Query: 77 NGKILPVEIKKSIEP 88
          +GKILP+E+KK  EP
Sbjct: 68 DGKILPIEMKKIPEP 82

[Close]

BLAST of Carg24933 vs. TrEMBL
Match: tr|A0A0A0KAS8|A0A0A0KAS8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G027440 PE=4 SV=1)

HSP 1 Score: 335.9 bits (860), Expect = 8.6e-89
Identity = 204/279 (73.12%), Postives = 214/279 (76.70%), Query Frame = 0


Query: 1   MLMAIEVFSEISTVGISPRISFSHDLNQADLLPSSS-DCNRERLDLTLLESDFDFCIGNL 60
           MLMAI+V SEISTVGISPRISFSHDLNQ DLLPSS+ D +R+RLDL+LLESDFDFCIGNL
Sbjct: 1   MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL 60

Query: 61  LRQDLSSADELFSNGKILPVEIKKSIEPNREVL-KPIQS-PXXXXXXXXXXXXXXXSEKK 120
           L QDLSSADELFSNGKILP    KSI+PNR++L KP +S                 SEKK
Sbjct: 61  LLQDLSSADELFSNGKILP----KSIQPNRQLLSKPNKSHRLIPPIPPDPSRNSVSSEKK 120

Query: 121 SLKELLSASFDADEKPQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSALNPK 180
           SLKELLSASFD DEKPQSKSFWQFKRSSSLNCESSKSR LIRSLHFLSRSNSTGS LNPK
Sbjct: 121 SLKELLSASFDGDEKPQSKSFWQFKRSSSLNCESSKSRGLIRSLHFLSRSNSTGSVLNPK 180

Query: 181 SQSTSKDPQKPNLQKQ--PSISSSRRSSTSISTSANSYFANLSSQKPSMRKNSGPNNGNG 240
            QS SKD Q+PNLQKQ                      FAN  SQKPSMRKN G NNGNG
Sbjct: 181 QQSNSKDCQRPNLQKQXXXXXXXXXXXXXXXXXXXXXXFANTCSQKPSMRKNFGWNNGNG 240

Query: 241 V-RISPFLNLPPPYISKVTVSFFGFGSLFCNGKIKKKKK 274
           V   SP LNLPPPYISKVTVSFFGFGSLFCNGK KKKKK
Sbjct: 241 VGSSSPLLNLPPPYISKVTVSFFGFGSLFCNGKTKKKKK 275

[Close]

BLAST of Carg24933 vs. TrEMBL
Match: tr|A0A1S3BE16|A0A1S3BE16_CUCME (uncharacterized protein LOC103488594 OS=Cucumis melo OX=3656 GN=LOC103488594 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 1.1e-88
Identity = 207/281 (73.67%), Postives = 215/281 (76.51%), Query Frame = 0


Query: 1   MLMAIEVFSEISTVGISPRISFSHDLNQADLLPSSS-DCNRERLDLTLLESDFDFCIGNL 60
           MLMAI+V SEISTVGISPRISFSHDLNQ DLLPSS+ D +R+RLDL+LLESDFDFCIGNL
Sbjct: 1   MLMAIDVCSEISTVGISPRISFSHDLNQTDLLPSSNCDRDRDRLDLSLLESDFDFCIGNL 60

Query: 61  LRQDLSSADELFSNGKILPVEIKKSIEPNREVL-KPIQS-PXXXXXXXXXXXXXXXSEKK 120
           L QDLSSADELFSNGKILP    KSIEPNR+VL KP QS                 SEKK
Sbjct: 61  LLQDLSSADELFSNGKILP----KSIEPNRQVLSKPNQSHRLIPPIPPDPSRNSVSSEKK 120

Query: 121 SLKELLSASFDADEKPQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSALNPK 180
           SLKELLSASFD +EK QSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGS LNPK
Sbjct: 121 SLKELLSASFDGEEKQQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSVLNPK 180

Query: 181 SQSTSKDPQKPNLQKQPSI---SSSRRSSTSISTSANSYFANLSSQKPSMRKNSGPNNGN 240
            QS SKD Q+PNLQKQ SI                     AN  SQK SMRKN G NNGN
Sbjct: 181 QQSNSKDCQRPNLQKQASIXXXXXXXXXXXXXXXXXXXXXANTCSQKHSMRKNFGWNNGN 240

Query: 241 GVRI--SPFLNLPPPYISKVTVSFFGFGSLFCNGKIKKKKK 274
           GV I  SP LNLPPPYISKVTVSFFGFGSLFCNGK KKKKK
Sbjct: 241 GVGISSSPLLNLPPPYISKVTVSFFGFGSLFCNGKTKKKKK 277

[Close]

BLAST of Carg24933 vs. TrEMBL
Match: tr|A0A061E523|A0A061E523_THECC (Copper-binding periplasmic protein OS=Theobroma cacao OX=3641 GN=TCM_009634 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 1.9e-72
Identity = 166/273 (60.81%), Postives = 197/273 (72.16%), Query Frame = 0


Query: 3   MAIEVFSEISTVGISPRISFSHDLNQADLLPSSSDCNRERLDLTLLE--SDFDFCIGNLL 62
           MAIEV SEIS+ GISPRISFSHDLNQ D   S  + +++RLD +LL+  SDFDFC GN  
Sbjct: 1   MAIEVCSEISSAGISPRISFSHDLNQKDDAESIEEHHQQRLDTSLLDSGSDFDFCFGNSF 60

Query: 63  RQDLSSADELFSNGKILPVEIKKSIEPNREVLKPIQSPXXXXXXXXXXXXXXXSEKKSLK 122
            Q+L SADELFSNGKILP+EIKK       V K +                  S KK LK
Sbjct: 61  VQELPSADELFSNGKILPIEIKKK---PLLVAKHVHRQSQPVPSPPRQTTTDNSGKKRLK 120

Query: 123 ELLSASFDADEKPQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSALNPKSQS 182
           E LS S DAD+KP SKSFWQFKRSSSLNCES++S+SLIRSL FLSRSNSTGSA NPKS  
Sbjct: 121 EFLSMSIDADDKPASKSFWQFKRSSSLNCESTRSKSLIRSLQFLSRSNSTGSAPNPKSTM 180

Query: 183 TSKDPQKPNLQKQPSISSSRRSSTSISTSANSYFANLSSQKPSMRKNSGPNNGNGVRISP 242
            SK+ QK +LQKQPS+S      +S+S+S+ +++   S+QKP ++KN G   GNGVR+SP
Sbjct: 181 LSKETQKQHLQKQPSLS----RKSSVSSSSGAFYTYSSTQKPPLKKNCGA-YGNGVRVSP 240

Query: 243 FLNLPPPYISKVTVSFFGFGSLFCNGKIKKKKK 274
            LNLP P+IS  TVSFFGFGSLFCNGK+KKKK+
Sbjct: 241 VLNLPQPFISNATVSFFGFGSLFCNGKVKKKKR 265

[Close]

BLAST of Carg24933 vs. TrEMBL
Match: tr|B9HJ45|B9HJ45_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G122300v3 PE=4 SV=2)

HSP 1 Score: 271.2 bits (692), Expect = 2.6e-69
Identity = 166/274 (60.58%), Postives = 195/274 (71.17%), Query Frame = 0


Query: 3   MAIEVFSEISTVGISPRISFSHDLNQADLLPSSSDCNRERLDLTLLESDFDFCIGNLLRQ 62
           MAI+V SEIS+ GISPRISFSHDLNQ     S  D    RLD +LL+SDFDFC GN   Q
Sbjct: 1   MAIDVCSEISSAGISPRISFSHDLNQTTDAVSIEDHYHRRLDSSLLDSDFDFCFGNSFVQ 60

Query: 63  DLSSADELFSNGKILPVEIKKSIEPNREV--LKPIQSPXXXXXXXXXXXXXXXSEKKSLK 122
           +LSSADELFSNGKILPVEIKK I  +++   LK + S                +EKK LK
Sbjct: 61  ELSSADELFSNGKILPVEIKKHIISSKDTDQLKSLIS-------QPQRNSSETTEKKQLK 120

Query: 123 ELLSASFDADEKPQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSALNPKSQS 182
           E LS S DADEKP SKSFWQFKRS+SLNC+S++S+ LIRSLHFLSRSNSTGSA NP  Q 
Sbjct: 121 EFLSMSLDADEKPASKSFWQFKRSNSLNCDSTRSKGLIRSLHFLSRSNSTGSAPNPPKQG 180

Query: 183 -TSKDPQKPNLQKQPSISSSRRSSTSISTSANSYFANLSSQKPSMRKNSGPNNGNGVRIS 242
             SK+ QKP LQKQ S+ S +   +S+ +SA  Y  N S QKP + +  G + GNGVRIS
Sbjct: 181 MLSKETQKPQLQKQASVPSRK---SSVPSSAAFYSYN-SQQKPPLLRKCG-SYGNGVRIS 240

Query: 243 PFLNLPPPYISKVTVSFFGFGSLFCNGKIKKKKK 274
           P LN+PPPYIS+ TV+ FG GSLFCNGK+KKKK+
Sbjct: 241 PVLNIPPPYISRGTVNLFGLGSLFCNGKVKKKKR 262

[Close]

BLAST of Carg24933 vs. TrEMBL
Match: tr|A0A2I4DWA2|A0A2I4DWA2_9ROSI (uncharacterized protein LOC108984051 OS=Juglans regia OX=51240 GN=LOC108984051 PE=4 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 6.4e-68
Identity = 166/275 (60.36%), Postives = 195/275 (70.91%), Query Frame = 0


Query: 3   MAIEVFSEISTVGISPRISFSHDLNQADLLPSSSDCNRERLDLTLLE--SDFDFCIGNLL 62
           MAI+V SEIS+ GISPRISFSHDLNQ D+L +    + +R DL+LL+  SDF FCIGN  
Sbjct: 1   MAIDVCSEISSPGISPRISFSHDLNQPDVLSNEDHRHHQRSDLSLLDSGSDFVFCIGNSF 60

Query: 63  RQDLSSADELFSNGKILPVEIKK-SIEPNR-EVLKPIQSPXXXXXXXXXXXXXXXSEKKS 122
            Q+LS ADELFSNGKI   EIK+ SI P++    +P+ S                +EKK 
Sbjct: 61  AQELSPADELFSNGKIRAKEIKQNSICPDKIRQSEPVSS-------RSRPSCTGNTEKKQ 120

Query: 123 LKELLSASFDADEKPQSKSFWQFKRSSSLNCESSKSRSLIRSLHFLSRSNSTGSALNPKS 182
           LKE LS SFD +EKP SKSFWQFKRS+SLNC+SS+SRSLIR L FLSRSNSTGSA N K 
Sbjct: 121 LKEFLSHSFDVEEKPPSKSFWQFKRSNSLNCDSSRSRSLIRPLQFLSRSNSTGSAPNAKP 180

Query: 183 QSTSKDPQKPNLQKQPSISSSRRSSTSISTSANSYFANLSSQKPSMRKNSGPNNGNGVRI 242
            + SK+ QKP+LQKQPS+SS +   +              SQKP   KNSG + G+GVRI
Sbjct: 181 ATLSKETQKPHLQKQPSVSSRK---SXXXXXXXXXXXXXXSQKPWPNKNSG-SYGSGVRI 240

Query: 243 SPFLNLPPPYISKVTVSFFGFGSLFCNGKIKKKKK 274
           SP LNLPPPYISKVTVSFFGFGSLFCNGK+K+KKK
Sbjct: 241 SPVLNLPPPYISKVTVSFFGFGSLFCNGKVKRKKK 264

The following BLAST results are available for this feature:

BLAST of Carg24933 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022939173.1	5.8e-129	99.26	uncharacterized protein LOC111445167 [Cucurbita moschata]	[more]
XP_023550641.1	8.6e-117	88.68	uncharacterized protein LOC111808723 [Cucurbita pepo subsp. pepo]	[more]
XP_022993317.1	4.7e-115	91.24	uncharacterized protein LOC111489360 [Cucurbita maxima]	[more]
XP_022971829.1	2.6e-97	80.51	uncharacterized protein LOC111470497 isoform X2 [Cucurbita maxima]	[more]
XP_022971826.1	1.1e-95	78.21	uncharacterized protein LOC111470497 isoform X1 [Cucurbita maxima]	[more]

BLAST of Carg24933 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68330.1	4.0e-31	48.94	unknown protein	[more]
AT1G48780.1	1.8e-15	39.37	unknown protein	[more]
AT1G67050.1	2.0e-11	36.27	unknown protein	[more]
AT3G18300.1	4.3e-09	33.22	unknown protein	[more]
AT5G38320.1	1.4e-04	37.33	unknown protein	[more]

BLAST of Carg24933 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg24933 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KAS8\|A0A0A0KAS8_CUCSA	8.6e-89	73.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G027440 PE=4 SV=1	[more]
tr\|A0A1S3BE16\|A0A1S3BE16_CUCME	1.1e-88	73.67	uncharacterized protein LOC103488594 OS=Cucumis melo OX=3656 GN=LOC103488594 PE=...	[more]
tr\|A0A061E523\|A0A061E523_THECC	1.9e-72	60.81	Copper-binding periplasmic protein OS=Theobroma cacao OX=3641 GN=TCM_009634 PE=4...	[more]
tr\|B9HJ45\|B9HJ45_POPTR	2.6e-69	60.58	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G122300v3 PE=...	[more]
tr\|A0A2I4DWA2\|A0A2I4DWA2_9ROSI	6.4e-68	60.36	uncharacterized protein LOC108984051 OS=Juglans regia OX=51240 GN=LOC108984051 P...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24933-RA	Carg24933-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 167..208
None	No IPR available	PANTHER	PTHR31722:SF9	SUBFAMILY NOT NAMED	coord: 3..273
None	No IPR available	PANTHER	PTHR31722	FAMILY NOT NAMED	coord: 3..273

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24933	CmaCh04G020670	Cucurbita maxima (Rimu)	carcmaB1103
Carg24933	CmoCh15G009570	Cucurbita moschata (Rifu)	carcmoB1071
Carg24933	Cp4.1LG13g06760	Cucurbita pepo (Zucchini)	carcpeB1111
Carg24933	Cp4.1LG01g18050	Cucurbita pepo (Zucchini)	carcpeB1112

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg24933	Cucurbita maxima (Rimu)	carcmaB1101
Carg24933	Cucurbita moschata (Rifu)	carcmoB1072