Carg24932 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24932
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	DUF1639 family protein
Location	Cucurbita_argyrosperma_scaffold_227 : 407654 .. 409132 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGCCGTGTTTGAAGTGGGGGAATCAGAAGCACTTGAGGTGCATGAAGGTGAATTCTAATGGTGTACAGGTCTCCGGCGTGAATCGACAATCTCACTCCTCGAGATCGGAGGAGTCTACGGAGAGTAAGAGTCGGGAATCGGGCTCAGAGATGCGGATGTTCTTCAAGGATTTGGAGATGAGACCGAAGGTTTCGAAATCGATAATCAAGAAAACCGACGACGTTGGGATCGAGGCGGTCAGAGAGAAGCTTATGTTTGATCTGAAGACGGCGGCCGATAAAATGAAAGAGGCGATTTTAAGTAAGGAGGCAGTGGTGGCCGAAGAAGAGGCGGAAGAGAAGAACGATTCTGCCGGAATGGAAGAGACGCCGGCGGCGGTTGCGTTATCGATGGTGGAGACCAGACCTTGGAATCTAAGGACGAGGAGAGCCGCTTGTAAGGCTCCGAATGTTGACGGTGGTGCGAGTAAGAATTTGAAGCTTGATGAGAAGAAATCGAATTCCAATTCCCCGTTGCGTAGTGATGGTGGCGCCAAGTCACCTAGGTTGAAAATTGGGACGGAGAAGAAGAAGAAGAAGGTGAAATTGGTAGTGCCGCTCTCGAAGAGAGAGATCGATGAAGATTTCATGGAAATGGTGGGACTCAGACCACCGAGGCGGCCCAAGAAGAGGACCAGAATCGTACAAAAGCAATTAGATGTAAGTTCGTTCAAATTGCCCTTATTCTTCGTCAAGTTTCGAGTAGTTTTCCAATTCAAGTTCTCTAATCTGCCTCTAGATACCATTTTTGCTTAGAAATAGAGAATCCACGTTTAATCTGTACCATTTTGCAGACGCTTTTTCCTGGGTTATGGCTGTCGGAGATCACAGCTGATTTGTATAAGGTCCCTGAATTACCTGAAAACGGCAAGGTAAATGCTCCTTTCGTTCTGTCGATAAGATCATTTTCTAAATGTTTATCTCTGAAGAAAGTGAGTGGTTCTGTTTAACTAGTCTTCATCCATCCTACATGATTGAGCTTCAAAATTCTTCCTGGATTCTGATACTGTAGATTTTTCTTCAATCTCTGTTGTTGCACAGGTGATGAAGGTTTAAAGTGCTACTTCTTTGCAGAGATTCAAAAACTTCCCCATTCATGTGCTGACTCCAGAGTAATTCATGGGTTTGATTGGTGATCATGCTGTATGCCCTGGGAGTTTGGTATCAACCACCGTTGAATCCCACCCAATAACTTGCGGTGTATGGTCTTCCTCTACTTTCAAATGCTAATTTTTGTTCATAAGTTAATCTGGTTTTGCCTTTGCTAGTCGTGGAATAATTCACAAAGAATAGGATTGGTGGAATTTGGAACTGGATAAAAGGACATTTTCTTGTATGATCTTGAGTGATACAATGTCTTGTGGAAAGCCCTGGTCAAGAAATGAATGTGTAGCATACTGTCATCATTTGGGAATATCAGTGCTTGAATATTGATGC

mRNA sequence

ATGTTGCCGTGTTTGAAGTGGGGGAATCAGAAGCACTTGAGGTGCATGAAGGTGAATTCTAATGGTGTACAGGTCTCCGGCGTGAATCGACAATCTCACTCCTCGAGATCGGAGGAGTCTACGGAGAGTAAGAGTCGGGAATCGGGCTCAGAGATGCGGATGTTCTTCAAGGATTTGGAGATGAGACCGAAGGTTTCGAAATCGATAATCAAGAAAACCGACGACGTTGGGATCGAGGCGGTCAGAGAGAAGCTTATGTTTGATCTGAAGACGGCGGCCGATAAAATGAAAGAGGCGATTTTAAGTAAGGAGGCAGTGGTGGCCGAAGAAGAGGCGGAAGAGAAGAACGATTCTGCCGGAATGGAAGAGACGCCGGCGGCGGTTGCGTTATCGATGGTGGAGACCAGACCTTGGAATCTAAGGACGAGGAGAGCCGCTTGTAAGGCTCCGAATGTTGACGGTGGTGCGAGTAAGAATTTGAAGCTTGATGAGAAGAAATCGAATTCCAATTCCCCGTTGCGTAGTGATGGTGGCGCCAAGTCACCTAGGTTGAAAATTGGGACGGAGAAGAAGAAGAAGAAGGTGAAATTGGTAGTGCCGCTCTCGAAGAGAGAGATCGATGAAGATTTCATGGAAATGGTGGGACTCAGACCACCGAGGCGGCCCAAGAAGAGGACCAGAATCGTACAAAAGCAATTAGATACGCTTTTTCCTGGGTTATGGCTGTCGGAGATCACAGCTGATTTGTATAAGGTCCCTGAATTACCTGAAAACGGCAAGGTGATGAAGGTTTAAAGTGCTACTTCTTTGCAGAGATTCAAAAACTTCCCCATTCATGTGCTGACTCCAGAGTAATTCATGGGTTTGATTGGTGATCATGCTGTATGCCCTGGGAGTTTGGTATCAACCACCGTTGAATCCCACCCAATAACTTGCGGTGTATGGTCTTCCTCTACTTTCAAATGCTAATTTTTGTTCATAAGTTAATCTGGTTTTGCCTTTGCTAGTCGTGGAATAATTCACAAAGAATAGGATTGGTGGAATTTGGAACTGGATAAAAGGACATTTTCTTGTATGATCTTGAGTGATACAATGTCTTGTGGAAAGCCCTGGTCAAGAAATGAATGTGTAGCATACTGTCATCATTTGGGAATATCAGTGCTTGAATATTGATGC

Coding sequence (CDS)

ATGTTGCCGTGTTTGAAGTGGGGGAATCAGAAGCACTTGAGGTGCATGAAGGTGAATTCTAATGGTGTACAGGTCTCCGGCGTGAATCGACAATCTCACTCCTCGAGATCGGAGGAGTCTACGGAGAGTAAGAGTCGGGAATCGGGCTCAGAGATGCGGATGTTCTTCAAGGATTTGGAGATGAGACCGAAGGTTTCGAAATCGATAATCAAGAAAACCGACGACGTTGGGATCGAGGCGGTCAGAGAGAAGCTTATGTTTGATCTGAAGACGGCGGCCGATAAAATGAAAGAGGCGATTTTAAGTAAGGAGGCAGTGGTGGCCGAAGAAGAGGCGGAAGAGAAGAACGATTCTGCCGGAATGGAAGAGACGCCGGCGGCGGTTGCGTTATCGATGGTGGAGACCAGACCTTGGAATCTAAGGACGAGGAGAGCCGCTTGTAAGGCTCCGAATGTTGACGGTGGTGCGAGTAAGAATTTGAAGCTTGATGAGAAGAAATCGAATTCCAATTCCCCGTTGCGTAGTGATGGTGGCGCCAAGTCACCTAGGTTGAAAATTGGGACGGAGAAGAAGAAGAAGAAGGTGAAATTGGTAGTGCCGCTCTCGAAGAGAGAGATCGATGAAGATTTCATGGAAATGGTGGGACTCAGACCACCGAGGCGGCCCAAGAAGAGGACCAGAATCGTACAAAAGCAATTAGATACGCTTTTTCCTGGGTTATGGCTGTCGGAGATCACAGCTGATTTGTATAAGGTCCCTGAATTACCTGAAAACGGCAAGGTGATGAAGGTTTAA

Protein sequence

MLPCLKWGNQKHLRCMKVNSNGVQVSGVNRQSHSSRSEESTESKSRESGSEMRMFFKDLEMRPKVSKSIIKKTDDVGIEAVREKLMFDLKTAADKMKEAILSKEAVVAEEEAEEKNDSAGMEETPAAVALSMVETRPWNLRTRRAACKAPNVDGGASKNLKLDEKKSNSNSPLRSDGGAKSPRLKIGTEKKKKKVKLVVPLSKREIDEDFMEMVGLRPPRRPKKRTRIVQKQLDTLFPGLWLSEITADLYKVPELPENGKVMKV

Homology

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BLAST of Carg24932 vs. NCBI nr
Match: XP_023549495.1 (uncharacterized protein LOC111807980 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 492.3 bits (1266), Expect = 1.0e-135
Identity = 260/264 (98.48%), Postives = 261/264 (98.86%), Query Frame = 0


Query: 1   MLPCLKWGNQKHLRCMKVNSNGVQVSGVNRQSHSSRSEESTESKSRESGSEMRMFFKDLE 60
           MLPCLKWGNQKHLRCMKVNSNGVQVSGVNRQSHSSRSEESTES+S ESGSEMRMFFKDLE
Sbjct: 15  MLPCLKWGNQKHLRCMKVNSNGVQVSGVNRQSHSSRSEESTESRSLESGSEMRMFFKDLE 74

Query: 61  MRPKVSKSIIKKTDDVGIEAVREKLMFDLKTAADKMKEAILSKEAVVAEEEAEEKNDSAG 120
           MRPKVSKSIIKKTDDVGIEAVREKLMFDLKTAADKMKEAILSKEAVVAEEEAEEKNDSAG
Sbjct: 75  MRPKVSKSIIKKTDDVGIEAVREKLMFDLKTAADKMKEAILSKEAVVAEEEAEEKNDSAG 134

Query: 121 MEETPAAVALSMVETRPWNLRTRRAACKAPNVDGGASKNLKLDEKKSNSNSPLRSDGGAK 180
           MEETPAAVALSM ETRPWNLRTRRAACKAPNVDGG SKNLKLDEKKSNSNSPLRSDGGAK
Sbjct: 135 MEETPAAVALSMAETRPWNLRTRRAACKAPNVDGGGSKNLKLDEKKSNSNSPLRSDGGAK 194

Query: 181 SPRLKIGTEKKKKKVKLVVPLSKREIDEDFMEMVGLRPPRRPKKRTRIVQKQLDTLFPGL 240
           SPRLKIGTEKKKKKVKLVVPLSKREIDEDFMEMVGLRPPRRPKKRTRIVQKQLDTLFPGL
Sbjct: 195 SPRLKIGTEKKKKKVKLVVPLSKREIDEDFMEMVGLRPPRRPKKRTRIVQKQLDTLFPGL 254

Query: 241 WLSEITADLYKVPELPENGKVMKV 265
           WLSEITADLYKVPELPENGKVMKV
Sbjct: 255 WLSEITADLYKVPELPENGKVMKV 278

[Close]

BLAST of Carg24932 vs. NCBI nr
Match: XP_022939951.1 (uncharacterized protein LOC111445662 [Cucurbita moschata])

HSP 1 Score: 488.8 bits (1257), Expect = 1.2e-134
Identity = 259/264 (98.11%), Postives = 259/264 (98.11%), Query Frame = 0


Query: 1   MLPCLKWGNQKHLRCMKVNSNGVQVSGVNRQSHSSRSEESTESKSRESGSEMRMFFKDLE 60
           MLPCLKWGNQKHLRCMKVNSNGVQVSGVNRQSHSSRSEEST   SRESGSEMRMFFKDLE
Sbjct: 15  MLPCLKWGNQKHLRCMKVNSNGVQVSGVNRQSHSSRSEESTXXXSRESGSEMRMFFKDLE 74

Query: 61  MRPKVSKSIIKKTDDVGIEAVREKLMFDLKTAADKMKEAILSKEAVVAEEEAEEKNDSAG 120
           MRPKVSKSIIKKTDDVGIEAVREKLMFDLKTAADKMKEAILSKEAVVAEEEAEEKNDSAG
Sbjct: 75  MRPKVSKSIIKKTDDVGIEAVREKLMFDLKTAADKMKEAILSKEAVVAEEEAEEKNDSAG 134

Query: 121 MEETPAAVALSMVETRPWNLRTRRAACKAPNVDGGASKNLKLDEKKSNSNSPLRSDGGAK 180
           MEETPAAVALSMVETRPWNLRTRRAACKAPNVDGG SKNLKLDEKKSNSNSPLRSDGGAK
Sbjct: 135 MEETPAAVALSMVETRPWNLRTRRAACKAPNVDGGGSKNLKLDEKKSNSNSPLRSDGGAK 194

Query: 181 SPRLKIGTEKKKKKVKLVVPLSKREIDEDFMEMVGLRPPRRPKKRTRIVQKQLDTLFPGL 240
           SPRLKIGTEK KKKVKLVVPLSKREIDEDFMEMVGLRPPRRPKKRTRIVQKQLDTLFPGL
Sbjct: 195 SPRLKIGTEKTKKKVKLVVPLSKREIDEDFMEMVGLRPPRRPKKRTRIVQKQLDTLFPGL 254

Query: 241 WLSEITADLYKVPELPENGKVMKV 265
           WLSEITADLYKVPELPENGKVMKV
Sbjct: 255 WLSEITADLYKVPELPENGKVMKV 278

[Close]

BLAST of Carg24932 vs. NCBI nr
Match: XP_022994039.1 (uncharacterized protein LOC111489849 [Cucurbita maxima])

HSP 1 Score: 473.8 bits (1218), Expect = 3.9e-130
Identity = 251/264 (95.08%), Postives = 252/264 (95.45%), Query Frame = 0


Query: 1   MLPCLKWGNQKHLRCMKVNSNGVQVSGVNRQSHSSRSEESTESKSRESGSEMRMFFKDLE 60
           MLPCLKWGNQKHLRCMKVNSNGVQVSG+NRQSHSSRSEE      RESGSEMRMFFKDLE
Sbjct: 15  MLPCLKWGNQKHLRCMKVNSNGVQVSGMNRQSHSSRSEEXXXXXXRESGSEMRMFFKDLE 74

Query: 61  MRPKVSKSIIKKTDDVGIEAVREKLMFDLKTAADKMKEAILSKEAVVAEEEAEEKNDSAG 120
           MRPKVSKSIIKKTDDVGIEAVREKLMFDLKTAADKMKEAILSKEAVV  EEAEEKNDSAG
Sbjct: 75  MRPKVSKSIIKKTDDVGIEAVREKLMFDLKTAADKMKEAILSKEAVVTGEEAEEKNDSAG 134

Query: 121 MEETPAAVALSMVETRPWNLRTRRAACKAPNVDGGASKNLKLDEKKSNSNSPLRSDGGAK 180
           MEETPAAVALSM ETRPWNLRTRRAACKAPNVDGG SKNLKLDEKKSNSNSPLRSDG  K
Sbjct: 135 MEETPAAVALSMAETRPWNLRTRRAACKAPNVDGGGSKNLKLDEKKSNSNSPLRSDGDVK 194

Query: 181 SPRLKIGTEKKKKKVKLVVPLSKREIDEDFMEMVGLRPPRRPKKRTRIVQKQLDTLFPGL 240
           SPRLKIGTEKKKKKVKLVVPLSKREIDEDFMEMVGLRPPRRPKKRTRIVQKQLDTLFPGL
Sbjct: 195 SPRLKIGTEKKKKKVKLVVPLSKREIDEDFMEMVGLRPPRRPKKRTRIVQKQLDTLFPGL 254

Query: 241 WLSEITADLYKVPELPENGKVMKV 265
           WLSEITADLYKVPELPENGKVMKV
Sbjct: 255 WLSEITADLYKVPELPENGKVMKV 278

[Close]

BLAST of Carg24932 vs. NCBI nr
Match: XP_008445636.1 (PREDICTED: uncharacterized protein LOC103488593 [Cucumis melo])

HSP 1 Score: 440.7 bits (1132), Expect = 3.6e-120
Identity = 241/265 (90.94%), Postives = 248/265 (93.58%), Query Frame = 0


Query: 1   MLPCLKWGNQKHLRCMKVNSNGVQVSGVNRQSHSSRSEESTESKSRESGSEMRMFFKDLE 60
           MLPCLKWG+QKHLRCMKVNSNGVQVSGVNRQSHSSRSEESTE++SRESG EMRMF KDLE
Sbjct: 15  MLPCLKWGSQKHLRCMKVNSNGVQVSGVNRQSHSSRSEESTETRSRESGLEMRMFLKDLE 74

Query: 61  MRPKVSKSIIKKTDDVGIEAVREKLMFDLKTAADKMKEAILSKEAVVAEEEAE-EKNDSA 120
           MRPKVSKS IKKTDD GIEAVREKLMFDLKTAADKMKEAILSKEA VA EEA+ +KNDSA
Sbjct: 75  MRPKVSKSRIKKTDDDGIEAVREKLMFDLKTAADKMKEAILSKEAAVAGEEADGKKNDSA 134

Query: 121 GMEETPAAVALSMVETRPWNLRTRRAACKA-PNVDGGASKNLKLDEKKSNSNSPLRSDGG 180
           GMEET AAVALS+ E RPWNLRTRRAACKA PNVDGG SKNLK+DEKKSNS SPLRSDGG
Sbjct: 135 GMEETVAAVALSLAEARPWNLRTRRAACKAPPNVDGGGSKNLKIDEKKSNSESPLRSDGG 194

Query: 181 AKSPRLKIGTEKKKKKVKLVVPLSKREIDEDFMEMVGLRPPRRPKKRTRIVQKQLDTLFP 240
           AKSPRLKIG E KKKKVKLVVPLSKREIDEDFMEMVGLRPPRRPKKRTRIVQKQLDTLFP
Sbjct: 195 AKSPRLKIGPE-KKKKVKLVVPLSKREIDEDFMEMVGLRPPRRPKKRTRIVQKQLDTLFP 254

Query: 241 GLWLSEITADLYKVPELPENGKVMK 264
           GLWLSEITADLYKV ELPENGKV K
Sbjct: 255 GLWLSEITADLYKVSELPENGKVTK 278

[Close]

BLAST of Carg24932 vs. NCBI nr
Match: XP_004138348.1 (PREDICTED: uncharacterized protein LOC101205564 [Cucumis sativus] >KGN45937.1 hypothetical protein Csa_6G024940 [Cucumis sativus])

HSP 1 Score: 434.9 bits (1117), Expect = 2.0e-118
Identity = 240/265 (90.57%), Postives = 245/265 (92.45%), Query Frame = 0


Query: 1   MLPCLKWGNQKHLRCMKVNSNGVQVSGVNRQSHSSRSEESTESKSRESGSEMRMFFKDLE 60
           MLPCLKWG+QKHLRCMKVNSNGVQVSGV RQSHSSRSEESTES+SRESG EMRMF KDLE
Sbjct: 15  MLPCLKWGSQKHLRCMKVNSNGVQVSGVYRQSHSSRSEESTESRSRESGLEMRMFLKDLE 74

Query: 61  MRPKVSKSIIKKTDDVGIEAVREKLMFDLKTAADKMKEAILSKEAVVAEEEAE-EKNDSA 120
           MRPKVSKS IKKTDD GIEAVREKLMFDLKTAADKMKEAILSKEA VA EEA+ +KNDSA
Sbjct: 75  MRPKVSKSRIKKTDDDGIEAVREKLMFDLKTAADKMKEAILSKEAAVAGEEADGKKNDSA 134

Query: 121 GMEETPAAVALSMVETRPWNLRTRRAACKA-PNVDGGASKNLKLDEKKSNSNSPLRSDGG 180
           GMEET AAVALSM E RPWNLRTRRAACKA PNVDGG SKNLK+DEKKSN  S LRSDGG
Sbjct: 135 GMEETAAAVALSMAEARPWNLRTRRAACKAPPNVDGGGSKNLKIDEKKSNYESTLRSDGG 194

Query: 181 AKSPRLKIGTEKKKKKVKLVVPLSKREIDEDFMEMVGLRPPRRPKKRTRIVQKQLDTLFP 240
           AKSPRLKIG E KKKKVKLVVPLSKREIDEDFMEMVGLRPPRRPKKRTRIVQKQLDTLFP
Sbjct: 195 AKSPRLKIGPE-KKKKVKLVVPLSKREIDEDFMEMVGLRPPRRPKKRTRIVQKQLDTLFP 254

Query: 241 GLWLSEITADLYKVPELPENGKVMK 264
           GLWLSEITADLYKV ELPENGKV K
Sbjct: 255 GLWLSEITADLYKVSELPENGKVTK 278

[Close]

BLAST of Carg24932 vs. TAIR10
Match: AT1G68340.1 (Protein of unknown function (DUF1639))

HSP 1 Score: 132.9 bits (333), Expect = 2.9e-31
Identity = 97/254 (38.19%), Postives = 134/254 (52.76%), Query Frame = 0


Query: 7   WGNQKHLRCMKVNSNGVQVSGVNRQSHSSRSEESTESKSRESGSEMRMFFKDLEMRPKVS 66
           WG Q+ LRC K + +              R      S + ES  + R        R KV 
Sbjct: 22  WGTQRLLRCGKGDDSDXXXXXXXXXXXDQRIRR--RSSNFESDHQNR--------RLKVE 81

Query: 67  KSIIKKTDDVGIEAVREKLMFDLKTAADKMKEAILSKEAVVAEEEAEEKNDSAGMEETPA 126
            S     +  GIE  REK+M DL+  ADKMKE+I  ++ ++ EEE +++ +    +  P 
Sbjct: 82  SS-----EKEGIEEFREKIMLDLRNVADKMKESIFRQQVLLGEEEEDKEIEIERDDSPPE 141

Query: 127 AVALSMVETRPWNLRTRRAACKAPNVDGGASKNLKLDEKKSNSNSPLRSDGGAKSPRLKI 186
           A   + VE RPWNLR RRAACK       AS +L +D K     S +            +
Sbjct: 142 ATGAATVEVRPWNLRKRRAACK-------ASISLGIDSKNQCKESVMNPS--------ML 201

Query: 187 GTEKKKKKVKLVVPLSKREIDEDFMEMVGLRPPRRPKKRTRIVQKQLDTLFPGLWLSEIT 246
           G E  K + +L+  LSK+EI+ED+M M+GL+PPRRPKKR+R VQKQ+D L    +++EIT
Sbjct: 202 GNELGKDRSRLLYTLSKKEIEEDYMMMIGLKPPRRPKKRSRTVQKQIDLLNFASYITEIT 245

Query: 247 ADLYKVPELPENGK 261
            DLY VP+  E  K
Sbjct: 262 EDLYNVPDQAEKRK 245

[Close]

BLAST of Carg24932 vs. TAIR10
Match: AT1G25370.1 (Protein of unknown function (DUF1639))

HSP 1 Score: 117.5 bits (293), Expect = 1.3e-26
Identity = 75/179 (41.90%), Postives = 103/179 (57.54%), Query Frame = 0


Query: 77  GIEAVREKLMFDLKTAADKMKEAILSKEAVVAEEEAEEKNDSAGMEETPAAVALSMVETR 136
           GIE  R KLM DLKT  DK+ +++ +K      E                     +   +
Sbjct: 96  GIEEFRVKLMSDLKTETDKITQSMFNKGVT---EXXXXXXXXXXXXXXXXXXXXMIPPVK 155

Query: 137 PWNLRTRR-AACKAPNVDGGASKNLKLDEKKSNSNSPLRSDGGAKSPRLKIGTEKKKKKV 196
           PWNLR RR AACK P  +   +K + ++EK   + SP+R  GG          E +KK+ 
Sbjct: 156 PWNLRKRRAAACKEPESNSLINKGIVIEEKVVKNPSPVRGGGGV--------VEAEKKRP 215

Query: 197 KLVVPLSKREIDEDFMEMVGLRPPRRPKKRTRIVQKQLDTLFPGLWLSEITADLYKVPE 255
              + LSK+E++EDF+ MVG R PRRPKKR++ VQK+LD+LFPGL+L+E+T D YKVPE
Sbjct: 216 MFSMKLSKKEMEEDFIGMVGHRAPRRPKKRSKTVQKKLDSLFPGLYLTEVTHDAYKVPE 263

[Close]

BLAST of Carg24932 vs. TAIR10
Match: AT1G48770.1 (Protein of unknown function (DUF1639))

HSP 1 Score: 86.3 bits (212), Expect = 3.1e-17
Identity = 50/117 (42.74%), Postives = 74/117 (63.25%), Query Frame = 0


Query: 136 RPWNLRTRRAACKAPNVDGGASKNLKLDEKKSNSNSPLRSDGGAKSPRLKIGTEKKKKKV 195
           +PWNLR RRAAC  P    G    + +++++S  ++    DGG          +KK +K 
Sbjct: 76  KPWNLRMRRAACSEP----GEEIEIGVNKRRSIIDN---EDGGG---------DKKNEKS 135

Query: 196 KLVVPLSKREIDEDFMEMVGLRPPRRPKKRTRIVQKQLDTLFPGLWLS--EITADLY 251
           K  + LS+ EI++DF  + G +PP+RPKKR R+VQK+L+T+FPGLWL+  E+T D Y
Sbjct: 136 KFSIALSRDEIEQDFSFVFGKKPPKRPKKRPRLVQKKLNTIFPGLWLNEEEVTIDSY 176

[Close]

BLAST of Carg24932 vs. TAIR10
Match: AT3G18295.1 (Protein of unknown function (DUF1639))

HSP 1 Score: 86.3 bits (212), Expect = 3.1e-17
Identity = 42/70 (60.00%), Postives = 54/70 (77.14%), Query Frame = 0


Query: 189 EKKKKKVKLVVPLSKREIDEDFMEMVGLRPPRRPKKRTRIVQKQLDTLFPGLWLS-EITA 248
           + K +KVK  V L + EI++DF  ++G RPPRRPKKR R+VQKQ++TLFPGLWL+ E+TA
Sbjct: 146 QNKNEKVKFSVSLLREEIEQDFSALIGKRPPRRPKKRPRLVQKQMNTLFPGLWLAEEVTA 205

Query: 249 DLYKVPELPE 258
           D Y VPE  E
Sbjct: 206 DSYDVPEAVE 215

[Close]

BLAST of Carg24932 vs. TAIR10
Match: AT3G60410.1 (Protein of unknown function (DUF1639))

HSP 1 Score: 79.7 bits (195), Expect = 2.9e-15
Identity = 60/154 (38.96%), Postives = 79/154 (51.30%), Query Frame = 0


Query: 109 EEEAEEKNDSAGMEETPAAVALSMVETRPWNLRTRR-AACKAPNVDGGA----SKNLKLD 168
           + E E  +D  G E             + WNLR RR    K  ++  G     S N  L 
Sbjct: 178 DAEGERISDGGGQEADEFG-------PKTWNLRPRRPPPTKKRSIGHGGGVLKSCNGALP 237

Query: 169 EKKSNS---NSPLRSDGGAKSPRLKIGTEKKKKKVKLVVPLSKREIDEDFMEMVGLRPPR 228
           E KS        +RS  G  +      TE+K+KK +L + LSK EIDED   + G +P R
Sbjct: 238 ENKSLGTVRTESIRSRNGVDAKMAT--TERKEKKPRLSISLSKLEIDEDIYALTGSKPSR 297

Query: 229 RPKKRTRIVQKQLDTLFPGLWLSEITADLYKVPE 255
           RPKKR + VQKQLD LFPGLW+  ++++ YKV E
Sbjct: 298 RPKKRAKNVQKQLDVLFPGLWMGNVSSEAYKVSE 322

[Close]

BLAST of Carg24932 vs. TrEMBL
Match: tr|A0A1S3BDW1|A0A1S3BDW1_CUCME (uncharacterized protein LOC103488593 OS=Cucumis melo OX=3656 GN=LOC103488593 PE=4 SV=1)

HSP 1 Score: 440.7 bits (1132), Expect = 2.4e-120
Identity = 241/265 (90.94%), Postives = 248/265 (93.58%), Query Frame = 0


Query: 1   MLPCLKWGNQKHLRCMKVNSNGVQVSGVNRQSHSSRSEESTESKSRESGSEMRMFFKDLE 60
           MLPCLKWG+QKHLRCMKVNSNGVQVSGVNRQSHSSRSEESTE++SRESG EMRMF KDLE
Sbjct: 15  MLPCLKWGSQKHLRCMKVNSNGVQVSGVNRQSHSSRSEESTETRSRESGLEMRMFLKDLE 74

Query: 61  MRPKVSKSIIKKTDDVGIEAVREKLMFDLKTAADKMKEAILSKEAVVAEEEAE-EKNDSA 120
           MRPKVSKS IKKTDD GIEAVREKLMFDLKTAADKMKEAILSKEA VA EEA+ +KNDSA
Sbjct: 75  MRPKVSKSRIKKTDDDGIEAVREKLMFDLKTAADKMKEAILSKEAAVAGEEADGKKNDSA 134

Query: 121 GMEETPAAVALSMVETRPWNLRTRRAACKA-PNVDGGASKNLKLDEKKSNSNSPLRSDGG 180
           GMEET AAVALS+ E RPWNLRTRRAACKA PNVDGG SKNLK+DEKKSNS SPLRSDGG
Sbjct: 135 GMEETVAAVALSLAEARPWNLRTRRAACKAPPNVDGGGSKNLKIDEKKSNSESPLRSDGG 194

Query: 181 AKSPRLKIGTEKKKKKVKLVVPLSKREIDEDFMEMVGLRPPRRPKKRTRIVQKQLDTLFP 240
           AKSPRLKIG E KKKKVKLVVPLSKREIDEDFMEMVGLRPPRRPKKRTRIVQKQLDTLFP
Sbjct: 195 AKSPRLKIGPE-KKKKVKLVVPLSKREIDEDFMEMVGLRPPRRPKKRTRIVQKQLDTLFP 254

Query: 241 GLWLSEITADLYKVPELPENGKVMK 264
           GLWLSEITADLYKV ELPENGKV K
Sbjct: 255 GLWLSEITADLYKVSELPENGKVTK 278

[Close]

BLAST of Carg24932 vs. TrEMBL
Match: tr|A0A0A0KC40|A0A0A0KC40_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G024940 PE=4 SV=1)

HSP 1 Score: 434.9 bits (1117), Expect = 1.3e-118
Identity = 240/265 (90.57%), Postives = 245/265 (92.45%), Query Frame = 0


Query: 1   MLPCLKWGNQKHLRCMKVNSNGVQVSGVNRQSHSSRSEESTESKSRESGSEMRMFFKDLE 60
           MLPCLKWG+QKHLRCMKVNSNGVQVSGV RQSHSSRSEESTES+SRESG EMRMF KDLE
Sbjct: 15  MLPCLKWGSQKHLRCMKVNSNGVQVSGVYRQSHSSRSEESTESRSRESGLEMRMFLKDLE 74

Query: 61  MRPKVSKSIIKKTDDVGIEAVREKLMFDLKTAADKMKEAILSKEAVVAEEEAE-EKNDSA 120
           MRPKVSKS IKKTDD GIEAVREKLMFDLKTAADKMKEAILSKEA VA EEA+ +KNDSA
Sbjct: 75  MRPKVSKSRIKKTDDDGIEAVREKLMFDLKTAADKMKEAILSKEAAVAGEEADGKKNDSA 134

Query: 121 GMEETPAAVALSMVETRPWNLRTRRAACKA-PNVDGGASKNLKLDEKKSNSNSPLRSDGG 180
           GMEET AAVALSM E RPWNLRTRRAACKA PNVDGG SKNLK+DEKKSN  S LRSDGG
Sbjct: 135 GMEETAAAVALSMAEARPWNLRTRRAACKAPPNVDGGGSKNLKIDEKKSNYESTLRSDGG 194

Query: 181 AKSPRLKIGTEKKKKKVKLVVPLSKREIDEDFMEMVGLRPPRRPKKRTRIVQKQLDTLFP 240
           AKSPRLKIG E KKKKVKLVVPLSKREIDEDFMEMVGLRPPRRPKKRTRIVQKQLDTLFP
Sbjct: 195 AKSPRLKIGPE-KKKKVKLVVPLSKREIDEDFMEMVGLRPPRRPKKRTRIVQKQLDTLFP 254

Query: 241 GLWLSEITADLYKVPELPENGKVMK 264
           GLWLSEITADLYKV ELPENGKV K
Sbjct: 255 GLWLSEITADLYKVSELPENGKVTK 278

[Close]

BLAST of Carg24932 vs. TrEMBL
Match: tr|A0A251R618|A0A251R618_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G313700 PE=4 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 4.2e-48
Identity = 144/286 (50.35%), Postives = 177/286 (61.89%), Query Frame = 0


Query: 5   LKWGNQKHLRCMKVNSNG----VQVSGVNRQSHSSRSEEST-ESKSRESGSEMRMFFKDL 64
           LKWGNQKHLRCMKV+S+      + S V+R+S + R E S   ++ RES  E R F    
Sbjct: 37  LKWGNQKHLRCMKVSSDAGGSTGEASAVDRRSSAQRLESSVMMTRRRESEFEKRRF---R 96

Query: 65  EMRPKVSKSIIKKTDDV--GIEAVREKLMFDLKTAADKMKEAILSKEAV-VAEEEAE--- 124
             RP++      + DD   GIEAVREKLMFDLKTAADKMK+AIL +E V VA  + +   
Sbjct: 97  APRPRI------ENDDAEEGIEAVREKLMFDLKTAADKMKDAILREEEVAVAAADTDMXX 156

Query: 125 ---EKNDSAGMEETPAAVALSMVETRPWNLRTRRAACKAPNVDGGASKNLKLDEKKSNSN 184
                        +PAA A    E RPWNLRTRRAACKAP + GG +K L+++EKK+N  
Sbjct: 157 XXXXXXXXXXXXXSPAAAA----EVRPWNLRTRRAACKAP-LCGGGAKGLRIEEKKAN-Y 216

Query: 185 SPLRSDG--GAKSPRLKIGT------------EKKKKKVKLVVPLSKREIDEDFMEMVGL 244
           SPLRS+G  G KSPR   G                         L+K+EI+EDFM M+G 
Sbjct: 217 SPLRSEGNNGVKSPRPVRGAXXXXXXXXXXXXXXXXXXXXXXXSLTKKEIEEDFMVMLGH 276

Query: 245 RPPRRPKKRTRIVQKQLDTLFPGLWLSEITADLYKVPELPENGKVM 263
           RPPRRPKKR R VQKQLDTLFPG+WL+E++A+ YKVPE PE  KV+
Sbjct: 277 RPPRRPKKRPRNVQKQLDTLFPGMWLTEVSAETYKVPEFPETAKVI 307

[Close]

BLAST of Carg24932 vs. TrEMBL
Match: tr|A0A251R8L2|A0A251R8L2_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G313700 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.6e-47
Identity = 143/284 (50.35%), Postives = 175/284 (61.62%), Query Frame = 0


Query: 5   LKWGNQKHLRCMKVNSNG----VQVSGVNRQSHSSRSEEST-ESKSRESGSEMRMFFKDL 64
           LKWGNQKHLRCMKV+S+      + S V+R+S + R E S   ++ RES  E R F    
Sbjct: 37  LKWGNQKHLRCMKVSSDAGGSTGEASAVDRRSSAQRLESSVMMTRRRESEFEKRRF---R 96

Query: 65  EMRPKVSKSIIKKTDDV--GIEAVREKLMFDLKTAADKMKEAILSKEAV-VAEEEAE--- 124
             RP++      + DD   GIEAVREKLMFDLKTAADKMK+AIL +E V VA  + +   
Sbjct: 97  APRPRI------ENDDAEEGIEAVREKLMFDLKTAADKMKDAILREEEVAVAAADTDMXX 156

Query: 125 ---EKNDSAGMEETPAAVALSMVETRPWNLRTRRAACKAPNVDGGASKNLKLDEKKSNSN 184
                        +PAA A    E RPWNLRTRRAACKAP + GG +K L+++EKK+N  
Sbjct: 157 XXXXXXXXXXXXXSPAAAA----EVRPWNLRTRRAACKAP-LCGGGAKGLRIEEKKAN-Y 216

Query: 185 SPLRSDG--GAKSPRLKIGT------------EKKKKKVKLVVPLSKREIDEDFMEMVGL 244
           SPLRS+G  G KSPR   G                         L+K+EI+EDFM M+G 
Sbjct: 217 SPLRSEGNNGVKSPRPVRGAXXXXXXXXXXXXXXXXXXXXXXXSLTKKEIEEDFMVMLGH 276

Query: 245 RPPRRPKKRTRIVQKQLDTLFPGLWLSEITADLYKVPELPENGK 261
           RPPRRPKKR R VQKQLDTLFPG+WL+E++A+ YKVPE PE  K
Sbjct: 277 RPPRRPKKRPRNVQKQLDTLFPGMWLTEVSAETYKVPEFPETAK 305

[Close]

BLAST of Carg24932 vs. TrEMBL
Match: tr|A0A1J6KMI6|A0A1J6KMI6_NICAT (Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_37368 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 1.0e-46
Identity = 133/272 (48.90%), Postives = 176/272 (64.71%), Query Frame = 0


Query: 2   LPC-LKWGNQKHLRCMKVNSNGVQVSGVNRQSHSSRSEESTESKSRESGSEMRMFFKDLE 61
           LPC LKWGNQK LRC KV+S+G ++S VNR+S+    E+ +  + RES +  R    D  
Sbjct: 16  LPCGLKWGNQKFLRCAKVDSDG-EISTVNRRSY----EKESIGRRRESEAAERHRLNDRF 75

Query: 62  MRPKVSKSIIKKTDDVGIEAVREKLMFDLKTAADKMKEAILSKEAVVAEEEAEEKNDSAG 121
            R    +S+       GI A+REKLMFDL+T ADKMK+AI  KE +   +E  EK  S  
Sbjct: 76  TRK--FRSVNAGDSGEGIGAMREKLMFDLQTEADKMKDAIF-KEGL---DEQPEKEVSPA 135

Query: 122 MEETPAAVALSMVE-TRPWNLRTRRAACKAPN--------VDGGASKNLKLDEKKSNSNS 181
             +T  A A  +V+ +RPWNLRTRRAA K PN          GG+   LK++  ++N++S
Sbjct: 136 PAKTVTAGAADVVDLSRPWNLRTRRAASKEPNGFITGAVAGSGGSKGGLKIEVNRTNASS 195

Query: 182 PLRSDGGAKSPR------LKIGTE---KKKKKVKLVVPLSKREIDEDFMEMVGLRPPRRP 241
           PLR++  +  PR        +G     +K+++VK  VPLS++EI+EDFM+MVG RPPRRP
Sbjct: 196 PLRTENKSPIPRSGFAGGATVGASTSGEKRERVKFSVPLSRKEIEEDFMDMVGHRPPRRP 255

Query: 242 KKRTRIVQKQLDTLFPGLWLSEITADLYKVPE 255
           KKR + VQK LDTLFPGLWL+EITADLYKVP+
Sbjct: 256 KKRAKFVQKNLDTLFPGLWLTEITADLYKVPD 276

The following BLAST results are available for this feature:

BLAST of Carg24932 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023549495.1	1.0e-135	98.48	uncharacterized protein LOC111807980 [Cucurbita pepo subsp. pepo]	[more]
XP_022939951.1	1.2e-134	98.11	uncharacterized protein LOC111445662 [Cucurbita moschata]	[more]
XP_022994039.1	3.9e-130	95.08	uncharacterized protein LOC111489849 [Cucurbita maxima]	[more]
XP_008445636.1	3.6e-120	90.94	PREDICTED: uncharacterized protein LOC103488593 [Cucumis melo]	[more]
XP_004138348.1	2.0e-118	90.57	PREDICTED: uncharacterized protein LOC101205564 [Cucumis sativus] >KGN45937.1 hy...	[more]

BLAST of Carg24932 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68340.1	2.9e-31	38.19	Protein of unknown function (DUF1639)	[more]
AT1G25370.1	1.3e-26	41.90	Protein of unknown function (DUF1639)	[more]
AT1G48770.1	3.1e-17	42.74	Protein of unknown function (DUF1639)	[more]
AT3G18295.1	3.1e-17	60.00	Protein of unknown function (DUF1639)	[more]
AT3G60410.1	2.9e-15	38.96	Protein of unknown function (DUF1639)	[more]

BLAST of Carg24932 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg24932 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BDW1\|A0A1S3BDW1_CUCME	2.4e-120	90.94	uncharacterized protein LOC103488593 OS=Cucumis melo OX=3656 GN=LOC103488593 PE=...	[more]
tr\|A0A0A0KC40\|A0A0A0KC40_CUCSA	1.3e-118	90.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G024940 PE=4 SV=1	[more]
tr\|A0A251R618\|A0A251R618_PRUPE	4.2e-48	50.35	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G313700 PE=4 SV=1	[more]
tr\|A0A251R8L2\|A0A251R8L2_PRUPE	1.6e-47	50.35	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G313700 PE=4 SV=1	[more]
tr\|A0A1J6KMI6\|A0A1J6KMI6_NICAT	1.0e-46	48.90	Uncharacterized protein OS=Nicotiana attenuata OX=49451 GN=A4A49_37368 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR012438	DUF1639

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24932-RA	Carg24932-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 93..113
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..187
None	No IPR available	PANTHER	PTHR33130	FAMILY NOT NAMED	coord: 1..259
None	No IPR available	PANTHER	PTHR33130:SF27	SUBFAMILY NOT NAMED	coord: 1..259
IPR012438	Protein of unknown function DUF1639	PFAM	PF07797	DUF1639	coord: 201..250 e-value: 2.6E-26 score: 91.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24932	Cla003661	Watermelon (97103) v1	carwmB0793
Carg24932	Cla020409	Watermelon (97103) v1	carwmB0792
Carg24932	Csa5G609800	Cucumber (Chinese Long) v2	carcuB0811
Carg24932	MELO3C012261	Melon (DHL92) v3.5.1	carmeB0792
Carg24932	ClCG05G022580	Watermelon (Charleston Gray)	carwcgB0768
Carg24932	CSPI05G25400	Wild cucumber (PI 183967)	carcpiB0830
Carg24932	CmaCh15G009200	Cucurbita maxima (Rimu)	carcmaB1101
Carg24932	CmaCh04G015000	Cucurbita maxima (Rimu)	carcmaB1102
Carg24932	CmaCh04G020680	Cucurbita maxima (Rimu)	carcmaB1103
Carg24932	CmoCh15G009590	Cucurbita moschata (Rifu)	carcmoB1071
Carg24932	CmoCh04G021640	Cucurbita moschata (Rifu)	carcmoB1072
Carg24932	Cp4.1LG01g18060	Cucurbita pepo (Zucchini)	carcpeB1112
Carg24932	Cp4.1LG13g06740	Cucurbita pepo (Zucchini)	carcpeB1111
Carg24932	MELO3C012261.2	Melon (DHL92) v3.6.1	carmedB0804
Carg24932	CsaV3_5G034440	Cucumber (Chinese Long) v3	carcucB0834
Carg24932	Cla97C05G104410	Watermelon (97103) v2	carwmbB0831
Carg24932	Bhi07G001085	Wax gourd	carwgoB0929

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg24932	Carg01847	Silver-seed gourd	carcarB617
Carg24932	Carg19056	Silver-seed gourd	carcarB618

The following block(s) are covering this gene:

None