Carg24873 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGATGTTGATTGTGTTCTGAATCCTTTGATTGGAGCGAAACTGGAGCCATGGAGAATTCGAGCCTCTCCGATTCTCAGGTATTGCTTTCTTCTACTTGCGAATTGGCTGTTGTTACTGATTTCCATTTTGTGTTTGGTTCCTGCGAAAATATGAGGAATTACAAGCATCTTTTGCGGGAGAATTTCGTGTTTACTGATATGATAATTCTAGTGATTTGTTTAATTCGAGTTAGCGAATTTGCAGCAGCTTAATAGTGCAATCTTAGATTCAAATTTCTACTTCTAACCCTTTCGTTTGCATTTTTTTTATTTCTTTATGGCTATAGGTTCTGGATTCTTCGTTCTCGCATTCGCCATCTTCAGGTTCGTACGCTTCTCCCTGATTTATCGATTTAATGTGTGTTTGGATGTTGAGAAAATGCAGGAAAGAAAATTATGGCACATGACGATAGTGAACTTAAGTAGGATTTTGAACAAGTTTATGAGTTTTTGATTTAGGATATAGTTGGACTCACTTTCATTCGTTTGTTAATTTCCATCAGAACCGCCTGATATCAGGAACTGGTTCTCGAGCTATGTATACGAATCCCCCGAACTTGATTCAAATGACAATTTTGGAGATTCCATTTCGAGGGAGAGAGAATTTGGGGTTGAGGAGGATGAGCAAACAGCATGCGAGGAAAATGGAGTAATTGGAGAAAACATTGGTGAATCTAGGGATGTTACTAAGATTGATGAAGAAGAAGCGGCTGAGAAGCTTCCCGGAGCATGGATTTCTCTGAAATGCACTTCACTGAAAGATCATCGCGAAAGCCAGCCTTTAGGCATGGTATACAAACTTCTCTTCGTTTCGACTACTCTGTTCTTCAATTAATTTCAAAATAAGTATTTGCTTACAATTTGGTGGCTAGATCTCCCACCTAATGCTTGAACTTTTGTCACTTTTTTTTTTTTTTTGGATCATTCAATCAACACAAGACATGATGCGACGAAAAGAAAACTTCAATTGTTAATTAGCCAAATTTTAGAGGTATTAATCGGCTATAGAAATAGTTTAAGGGATCAAGTAAGTAGAAACTTAGACTTAGTTAGATGATGATTTTCTGTTTGGTTTTTCGTTTGTTCTAAAAAATTAAGGTTATTTACAAATATTTTGTGTTCTTCCATTTTAAAAGTTCTTTAAAGAAGACATCGTTAGAATAGGTTATTGACATTATAATTATTAGTAAACAATTTTACTTCTCAAACTAGAAAACTAAAATAAAAAGTATTGTTGAATAAACCATAAAATACTTCTGGGTCTTCTGAATTTGATCTTTTTATGTTATATGAACTGTTTGCAAGCAGCTGTAATGAGAGCTCAAAATTGTTAAAGTCTAACAGTTAATTTCTCTGTTTGTATTTTTATGTTAGAATCAAGATTCATGGTGCTCCCAATCGCTTCTGTCAGGTTTGTACCATTCTCTCTGGAATTCAATTTGCCAATAAAAATCAATATTCTATCCTTAAACTAACAGTTAATTTCTCTGTTTTTATTGCTCAATCAATTGATAGGAGATTCAATGAGAGGATCCGTTCTATTACGCCTTTGTATAATTCTAAAAGAACACCCGACGAACAGATGATCTCAGAGTCAACCGTGTCAAAATATAATATATAAGTCGTAGGACTAGAAATATTTAAAACTGGGATTTCCCAACCCTTTAAAATTGTTAACGTCTAACAGTTAATTTCTCTGTTTTTATTTTTATGTTAGAATCAAGATATAAAATTTGAACTTGTGACAACACAAGGACAATGACTGATTTTTGCTTTGATTTTTCATCAGAGCCTCCTGATGTTGGGAAGTGGTTTTCAAGTTATGTATATGAATCCCCTACACTGAATCTAAGCCAGGAATTTGGATATTGTGAAAGCGAGAAAACTGGGTTGGACGATGAAATGGAAGAGACTCAGGAAAATGTTAGAAAAACCAAAAATGGAGGTGAAATAGTAGAGTTGAACCTGTTCGAACAATGCAATGGCAATTCCAGGGGAAACAGGCTAAACAATAGGCCTCTGAGCGAGGTACAATTTTCCATCTTTTTTCTACAGGCTGTTCTTAGCATTTCCTTAGACTGAAAACACAACTTCTCGTTGCTCATATAAATGCAAGTCTATATTTTTTTTTAGACTTTTACTTTTGAGCTTCCTCTCAAAGTTTCGCGTCTAGTAGTGAAACGTTTCCACACTCTTATAAGCAATGCATCATTCTCCTCTATACCTACACTATCACTTTAAAGATGTGTGAACAATCCTCTTCTAATTTGGGGAGGAGAATGAAGCATTTTTATAATAAGGGTGTAGAAACTTCTCCTATAAAACGTGTTTTAAAAACCTCGAGGAGAAGCGGAAAGGAAAACAAATCTCATTTCTGTTGGGGAGGAGAATGAAACATTCTTATAATAAGGGTGTAGATGCGTTTTAAAAACCTTGAGGAGAAGTCCGAAAGGAAAAGCTCAAAAAAGATAATATCTGCTAGCGGTGGGCTTGAGCCGTTACTAATGATATTAGAGCCAGACACTAGGCGATGTGCCAGCAAAGACGCTGGGCTCCGAAGGAGAGTGGATTATGAGATCCTACATCGATTGGGGAGGAGAACGAAACATTTTTTTTATAAAGGTGTGGAAACCTCCCTAGTACGTCCATTTTAAAACCTTGTGTAGAAGTAGAAAGCGTTTGTATTCTATGTTAACATTGACTTGGTAATGTACTGATAGTTTCTCTCATTCATGCTAAAGATCATCCCCATGTCAAAATTTTAATCACCGTTACAAGTTTGAAGCTGGATGACGCTTCTCTGATTGTTTCTTTCAAGTCAAATTTCCATTTCTTTTTATTAGTTTGATAAGATCTCAACTGTTCATAGGAAGTAAAACTCTTTTAAACTGTTCTCAGCAGAATTTGTTCCCTGAAAAAACTTGGGAGAAAGACCCAAAAGAGAGAAGTCAGGGAACCAACGAAATCAGTTCAACCAAAGACTCTCAATGTAAGTTGCAAGAGAGAGTTTCACAAGAGAATGGTTCTGTGCCACTGCACATAAATAGAAGCTCAAATGATGAAAACAAGAAGCCTACAACTCATACAAATTCGATCCATAAGATTGATCTCATCCTGGAAAGTTCTGAAAATGATGAACAGTCAATAAGAGAACCAATTGTTCTAAGCAACAACAAAGAAAACAAAGAGAAAGGAGTATCAGAAGATGGTTTTATTACAGCAAGAAAGCGTGAATTTTCTGAAGAAACTTGCAAGAAATCAGTGGAAATGCAAGAAAACTATAAGAACAGAGAGGTAGGAAGTGGTTTTGGTTGTTTAAGAAGAAAGGCATTGAGAGACAAAACCAACTATGAACACTCTGATATGGTAGAGATAATTGGGAAATGGAGTTGTCCTCAGAAGAGTAAGCCGAGTCGTGGGCCGCCATTGAAGCAGCTTCGACTAGAGCGATGGGTTCACAAGAAATAA AGATGTTGATTGTGTTCTGAATCCTTTGATTGGAGCGAAACTGGAGCCATGGAGAATTCGAGCCTCTCCGATTCTCAGGTTCTGGATTCTTCGTTCTCGCATTCGCCATCTTCAGAACCGCCTGATATCAGGAACTGGTTCTCGAGCTATGTATACGAATCCCCCGAACTTGATTCAAATGACAATTTTGGAGATTCCATTTCGAGGGAGAGAGAATTTGGGGTTGAGGAGGATGAGCAAACAGCATGCGAGGAAAATGGAGTAATTGGAGAAAACATTGGTGAATCTAGGGATGTTACTAAGATTGATGAAGAAGAAGCGGCTGAGAAGCTTCCCGGAGCATGGATTTCTCTGAAATGCACTTCACTGAAAGATCATCGCGAAAGCCAGCCTTTAGGCATGAATCAAGATTCATGGTGCTCCCAATCGCTTCTGTCAGAGCCTCCTGATGTTGGGAAGTGGTTTTCAAGTTATGTATATGAATCCCCTACACTGAATCTAAGCCAGGAATTTGGATATTGTGAAAGCGAGAAAACTGGGTTGGACGATGAAATGGAAGAGACTCAGGAAAATGTTAGAAAAACCAAAAATGGAGGTGAAATAGTAGAGTTGAACCTGTTCGAACAATGCAATGGCAATTCCAGGGGAAACAGGCTAAACAATAGGCCTCTGAGCGAGCAGAATTTGTTCCCTGAAAAAACTTGGGAGAAAGACCCAAAAGAGAGAAGTCAGGGAACCAACGAAATCAGTTCAACCAAAGACTCTCAATGTAAGTTGCAAGAGAGAGTTTCACAAGAGAATGGTTCTGTGCCACTGCACATAAATAGAAGCTCAAATGATGAAAACAAGAAGCCTACAACTCATACAAATTCGATCCATAAGATTGATCTCATCCTGGAAAGTTCTGAAAATGATGAACAGTCAATAAGAGAACCAATTGTTCTAAGCAACAACAAAGAAAACAAAGAGAAAGGAGTATCAGAAGATGGTTTTATTACAGCAAGAAAGCGTGAATTTTCTGAAGAAACTTGCAAGAAATCAGTGGAAATGCAAGAAAACTATAAGAACAGAGAGGTAGGAAGTGGTTTTGGTTGTTTAAGAAGAAAGGCATTGAGAGACAAAACCAACTATGAACACTCTGATATGGTAGAGATAATTGGGAAATGGAGTTGTCCTCAGAAGAGTAAGCCGAGTCGTGGGCCGCCATTGAAGCAGCTTCGACTAGAGCGATGGGTTCACAAGAAATAA ATGGAGAATTCGAGCCTCTCCGATTCTCAGGTTCTGGATTCTTCGTTCTCGCATTCGCCATCTTCAGAACCGCCTGATATCAGGAACTGGTTCTCGAGCTATGTATACGAATCCCCCGAACTTGATTCAAATGACAATTTTGGAGATTCCATTTCGAGGGAGAGAGAATTTGGGGTTGAGGAGGATGAGCAAACAGCATGCGAGGAAAATGGAGTAATTGGAGAAAACATTGGTGAATCTAGGGATGTTACTAAGATTGATGAAGAAGAAGCGGCTGAGAAGCTTCCCGGAGCATGGATTTCTCTGAAATGCACTTCACTGAAAGATCATCGCGAAAGCCAGCCTTTAGGCATGAATCAAGATTCATGGTGCTCCCAATCGCTTCTGTCAGAGCCTCCTGATGTTGGGAAGTGGTTTTCAAGTTATGTATATGAATCCCCTACACTGAATCTAAGCCAGGAATTTGGATATTGTGAAAGCGAGAAAACTGGGTTGGACGATGAAATGGAAGAGACTCAGGAAAATGTTAGAAAAACCAAAAATGGAGGTGAAATAGTAGAGTTGAACCTGTTCGAACAATGCAATGGCAATTCCAGGGGAAACAGGCTAAACAATAGGCCTCTGAGCGAGCAGAATTTGTTCCCTGAAAAAACTTGGGAGAAAGACCCAAAAGAGAGAAGTCAGGGAACCAACGAAATCAGTTCAACCAAAGACTCTCAATGTAAGTTGCAAGAGAGAGTTTCACAAGAGAATGGTTCTGTGCCACTGCACATAAATAGAAGCTCAAATGATGAAAACAAGAAGCCTACAACTCATACAAATTCGATCCATAAGATTGATCTCATCCTGGAAAGTTCTGAAAATGATGAACAGTCAATAAGAGAACCAATTGTTCTAAGCAACAACAAAGAAAACAAAGAGAAAGGAGTATCAGAAGATGGTTTTATTACAGCAAGAAAGCGTGAATTTTCTGAAGAAACTTGCAAGAAATCAGTGGAAATGCAAGAAAACTATAAGAACAGAGAGGTAGGAAGTGGTTTTGGTTGTTTAAGAAGAAAGGCATTGAGAGACAAAACCAACTATGAACACTCTGATATGGTAGAGATAATTGGGAAATGGAGTTGTCCTCAGAAGAGTAAGCCGAGTCGTGGGCCGCCATTGAAGCAGCTTCGACTAGAGCGATGGGTTCACAAGAAATAA MENSSLSDSQVLDSSFSHSPSSEPPDIRNWFSSYVYESPELDSNDNFGDSISREREFGVEEDEQTACEENGVIGENIGESRDVTKIDEEEAAEKLPGAWISLKCTSLKDHRESQPLGMNQDSWCSQSLLSEPPDVGKWFSSYVYESPTLNLSQEFGYCESEKTGLDDEMEETQENVRKTKNGGEIVELNLFEQCNGNSRGNRLNNRPLSEQNLFPEKTWEKDPKERSQGTNEISSTKDSQCKLQERVSQENGSVPLHINRSSNDENKKPTTHTNSIHKIDLILESSENDEQSIREPIVLSNNKENKEKGVSEDGFITARKREFSEETCKKSVEMQENYKNREVGSGFGCLRRKALRDKTNYEHSDMVEIIGKWSCPQKSKPSRGPPLKQLRLERWVHKK
BLAST of Carg24873 vs. NCBI nr
Match: XP_022923363.1 (uncharacterized protein LOC111431085 isoform X1 [Cucurbita moschata]) HSP 1 Score: 776.9 bits (2005), Expect = 3.2e-221 Identity = 392/399 (98.25%), Postives = 396/399 (99.25%), Query Frame = 0
BLAST of Carg24873 vs. NCBI nr
Match: XP_022923364.1 (uncharacterized protein LOC111431085 isoform X2 [Cucurbita moschata]) HSP 1 Score: 770.8 bits (1989), Expect = 2.3e-219 Identity = 391/399 (97.99%), Postives = 395/399 (99.00%), Query Frame = 0
BLAST of Carg24873 vs. NCBI nr
Match: XP_023551721.1 (uncharacterized protein LOC111809611 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 746.5 bits (1926), Expect = 4.7e-212 Identity = 379/399 (94.99%), Postives = 388/399 (97.24%), Query Frame = 0
BLAST of Carg24873 vs. NCBI nr
Match: XP_023551722.1 (uncharacterized protein LOC111809611 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 740.3 bits (1910), Expect = 3.3e-210 Identity = 378/399 (94.74%), Postives = 387/399 (96.99%), Query Frame = 0
BLAST of Carg24873 vs. NCBI nr
Match: XP_008448796.1 (PREDICTED: uncharacterized protein LOC103490858 isoform X1 [Cucumis melo] >XP_008448797.1 PREDICTED: uncharacterized protein LOC103490858 isoform X1 [Cucumis melo] >XP_008448798.1 PREDICTED: uncharacterized protein LOC103490858 isoform X1 [Cucumis melo]) HSP 1 Score: 530.0 bits (1364), Expect = 6.9e-147 Identity = 291/426 (68.31%), Postives = 322/426 (75.59%), Query Frame = 0
BLAST of Carg24873 vs. TAIR10
Match: AT4G16807.1 (unknown protein) HSP 1 Score: 121.7 bits (304), Expect = 1.0e-27 Identity = 135/447 (30.20%), Postives = 189/447 (42.28%), Query Frame = 0
BLAST of Carg24873 vs. TrEMBL
Match: tr|A0A1S3BKJ7|A0A1S3BKJ7_CUCME (uncharacterized protein LOC103490858 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490858 PE=4 SV=1) HSP 1 Score: 530.0 bits (1364), Expect = 4.5e-147 Identity = 291/426 (68.31%), Postives = 322/426 (75.59%), Query Frame = 0
BLAST of Carg24873 vs. TrEMBL
Match: tr|A0A0A0L1G5|A0A0A0L1G5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017290 PE=4 SV=1) HSP 1 Score: 528.9 bits (1361), Expect = 1.0e-146 Identity = 289/426 (67.84%), Postives = 323/426 (75.82%), Query Frame = 0
BLAST of Carg24873 vs. TrEMBL
Match: tr|A0A1S3BKJ3|A0A1S3BKJ3_CUCME (uncharacterized protein LOC103490858 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490858 PE=4 SV=1) HSP 1 Score: 523.9 bits (1348), Expect = 3.2e-145 Identity = 290/426 (68.08%), Postives = 321/426 (75.35%), Query Frame = 0
BLAST of Carg24873 vs. TrEMBL
Match: tr|A0A2N9G4H6|A0A2N9G4H6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21896 PE=4 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 3.0e-50 Identity = 172/448 (38.39%), Postives = 236/448 (52.68%), Query Frame = 0
BLAST of Carg24873 vs. TrEMBL
Match: tr|A0A2I4F0E9|A0A2I4F0E9_9ROSI (uncharacterized protein LOC108994384 isoform X3 OS=Juglans regia OX=51240 GN=LOC108994384 PE=4 SV=1) HSP 1 Score: 193.4 bits (490), Expect = 1.0e-45 Identity = 161/469 (34.33%), Postives = 224/469 (47.76%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |