Carg24854 (gene) Silver-seed gourd

Overview
NameCarg24854
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionZinc finger protein
LocationCucurbita_argyrosperma_scaffold_245 : 60159 .. 60842 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGAGAGCCATAAATGCAAGCTCTGCTCTCGAAGCTTCGTCAATGGCAGAGCATTAGGCGGCCATATGAAAGCCCATTTAGCCACTTTCTCCATTGAACATGAAAATCCCATCAAAACCCTCAGATCACCAGATCCAGAAATGCTCTGGATCTCCACCGCCCAAGACAGAGAGAGCGAAACCGAGTCAAAGAATCCAACTCGGCGGCGCTCTAAACGAACTCGGAGATTCAAGTCCGAGTCACCGCCGTCGTCGGAGCCTGCGAGTTCCATCTCCGACACCTCGCCGGAGGAAGACGTCGCCATCTGTCTCGTAATGCTCTCGATGGAACAGGGGAAGGAACAGAGTCGGACGCCGGTGACGGTGGGGAAAAGTTTCCGATGTGGGAAATGCCGGAAATCTTTCCGATCGAACAGGGCACTGTTTGGGCACAGAAAAGTTTGCAGAAATGAAGGGGAAGAAGATGGGATTAATGGAGGTGAGTGGAAGATCTTTAAATGTTGTTATTGTTGTAAAGTGTTTGGGTCTGGACAAGCTTTAGGTGGACATAAAAGATCCCATTTACAGGGTTCGATCAGAGCCGCCATTGATGGGAGTTCTAGGAAGCTTGAGATCGGTTTGGATCTCAATTTGCCAGCTCCACTGGAAGAAGATGATTACAGTGTAGTTTCTTTTGTATGA

mRNA sequence

ATGGCGGAGAGCCATAAATGCAAGCTCTGCTCTCGAAGCTTCGTCAATGGCAGAGCATTAGGCGGCCATATGAAAGCCCATTTAGCCACTTTCTCCATTGAACATGAAAATCCCATCAAAACCCTCAGATCACCAGATCCAGAAATGCTCTGGATCTCCACCGCCCAAGACAGAGAGAGCGAAACCGAGTCAAAGAATCCAACTCGGCGGCGCTCTAAACGAACTCGGAGATTCAAGTCCGAGTCACCGCCGTCGTCGGAGCCTGCGAGTTCCATCTCCGACACCTCGCCGGAGGAAGACGTCGCCATCTGTCTCGTAATGCTCTCGATGGAACAGGGGAAGGAACAGAGTCGGACGCCGGTGACGGTGGGGAAAAGTTTCCGATGTGGGAAATGCCGGAAATCTTTCCGATCGAACAGGGCACTGTTTGGGCACAGAAAAGTTTGCAGAAATGAAGGGGAAGAAGATGGGATTAATGGAGGTGAGTGGAAGATCTTTAAATGTTGTTATTGTTGTAAAGTGTTTGGGTCTGGACAAGCTTTAGGTGGACATAAAAGATCCCATTTACAGGGTTCGATCAGAGCCGCCATTGATGGGAGTTCTAGGAAGCTTGAGATCGGTTTGGATCTCAATTTGCCAGCTCCACTGGAAGAAGATGATTACAGTGTAGTTTCTTTTGTATGA

Coding sequence (CDS)

ATGGCGGAGAGCCATAAATGCAAGCTCTGCTCTCGAAGCTTCGTCAATGGCAGAGCATTAGGCGGCCATATGAAAGCCCATTTAGCCACTTTCTCCATTGAACATGAAAATCCCATCAAAACCCTCAGATCACCAGATCCAGAAATGCTCTGGATCTCCACCGCCCAAGACAGAGAGAGCGAAACCGAGTCAAAGAATCCAACTCGGCGGCGCTCTAAACGAACTCGGAGATTCAAGTCCGAGTCACCGCCGTCGTCGGAGCCTGCGAGTTCCATCTCCGACACCTCGCCGGAGGAAGACGTCGCCATCTGTCTCGTAATGCTCTCGATGGAACAGGGGAAGGAACAGAGTCGGACGCCGGTGACGGTGGGGAAAAGTTTCCGATGTGGGAAATGCCGGAAATCTTTCCGATCGAACAGGGCACTGTTTGGGCACAGAAAAGTTTGCAGAAATGAAGGGGAAGAAGATGGGATTAATGGAGGTGAGTGGAAGATCTTTAAATGTTGTTATTGTTGTAAAGTGTTTGGGTCTGGACAAGCTTTAGGTGGACATAAAAGATCCCATTTACAGGGTTCGATCAGAGCCGCCATTGATGGGAGTTCTAGGAAGCTTGAGATCGGTTTGGATCTCAATTTGCCAGCTCCACTGGAAGAAGATGATTACAGTGTAGTTTCTTTTGTATGA

Protein sequence

MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLWISTAQDRESETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTPVTVGKSFRCGKCRKSFRSNRALFGHRKVCRNEGEEDGINGGEWKIFKCCYCCKVFGSGQALGGHKRSHLQGSIRAAIDGSSRKLEIGLDLNLPAPLEEDDYSVVSFV
Homology
[Close]
BLAST of Carg24854 vs. NCBI nr
Match: XP_022923480.1 (zinc finger protein ZAT9-like [Cucurbita moschata])

HSP 1 Score: 390.2 bits (1001), Expect = 4.8e-105
Identity = 226/227 (99.56%), Postives = 226/227 (99.56%), Query Frame = 0 

Query: 1   MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLWISTAQDRES 60
           MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPD EMLWISTAQDRES
Sbjct: 70  MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDQEMLWISTAQDRES 129

Query: 61  ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP 120
           ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP
Sbjct: 130 ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP 189

Query: 121 VTVGKSFRCGKCRKSFRSNRALFGHRKVCRNEGEEDGINGGEWXXXXXXXXXXXXXXXXX 180
           VTVGKSFRCGKCRKSFRSNRALFGHRKVCRNEGEEDGINGGEWXXXXXXXXXXXXXXXXX
Sbjct: 190 VTVGKSFRCGKCRKSFRSNRALFGHRKVCRNEGEEDGINGGEWXXXXXXXXXXXXXXXXX 249

Query: 181 XXXXXXXHLQGSIRAAIDGSSRKLEIGLDLNLPAPLEEDDYSVVSFV 228
           XXXXXXXHLQGSIRAAIDGSSRKLEIGLDLNLPAPLEEDDYSVVSFV
Sbjct: 250 XXXXXXXHLQGSIRAAIDGSSRKLEIGLDLNLPAPLEEDDYSVVSFV 296

[Close]
BLAST of Carg24854 vs. NCBI nr
Match: XP_023552986.1 (zinc finger protein ZAT9-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 379.0 bits (972), Expect = 1.1e-101
Identity = 222/227 (97.80%), Postives = 222/227 (97.80%), Query Frame = 0 

Query: 1   MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLWISTAQDRES 60
           MAE HKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLWIST QDRES
Sbjct: 57  MAEGHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLWISTVQDRES 116

Query: 61  ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP 120
           ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP
Sbjct: 117 ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP 176

Query: 121 VTVGKSFRCGKCRKSFRSNRALFGHRKVCRNEGEEDGINGGEWXXXXXXXXXXXXXXXXX 180
             VGKSFRCGKCRKSFRSNRAL GHRKVCRNEGEEDGINGGEWXXXXXXXXXXXXXXXXX
Sbjct: 177 --VGKSFRCGKCRKSFRSNRALVGHRKVCRNEGEEDGINGGEWXXXXXXXXXXXXXXXXX 236

Query: 181 XXXXXXXHLQGSIRAAIDGSSRKLEIGLDLNLPAPLEEDDYSVVSFV 228
           XXXXXXXHLQGSIRAAIDGSSRKLEIGLDLNLPAPLEEDDYSVVSFV
Sbjct: 237 XXXXXXXHLQGSIRAAIDGSSRKLEIGLDLNLPAPLEEDDYSVVSFV 281

[Close]
BLAST of Carg24854 vs. NCBI nr
Match: XP_022965161.1 (zinc finger protein ZAT9-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 349.4 bits (895), Expect = 9.4e-93
Identity = 208/227 (91.63%), Postives = 209/227 (92.07%), Query Frame = 0 

Query: 1   MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLWISTAQDRES 60
           MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEML IST QDRES
Sbjct: 1   MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLCISTIQDRES 60

Query: 61  ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP 120
           ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP
Sbjct: 61  ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP 120

Query: 121 VTVGKSFRCGKCRKSFRSNRALFGHRKVCRNEGEEDGINGGEWXXXXXXXXXXXXXXXXX 180
           VT+GKSFRCGKC KSFRSNRALFGHRKVCRNEGEEDGINGGEWXXXXXXXXXXXXXXXXX
Sbjct: 121 VTMGKSFRCGKCEKSFRSNRALFGHRKVCRNEGEEDGINGGEWXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXHLQGSIRAAIDGSSRKLEIGLDLNLPAPLEEDDYSVVSFV 228
           XXXXXXX               KLEIGLDLNLPAPLEEDDYSVVSFV
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXKLEIGLDLNLPAPLEEDDYSVVSFV 227

[Close]
BLAST of Carg24854 vs. NCBI nr
Match: XP_022965160.1 (zinc finger protein ZAT9-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 341.3 bits (874), Expect = 2.6e-90
Identity = 208/237 (87.76%), Postives = 209/237 (88.19%), Query Frame = 0 

Query: 1   MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLWISTAQDRES 60
           MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEML IST QDRES
Sbjct: 1   MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLCISTIQDRES 60

Query: 61  ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRT- 120
           ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRT 
Sbjct: 61  ETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQGKEQSRTP 120

Query: 121 ---------PVTVGKSFRCGKCRKSFRSNRALFGHRKVCRNEGEEDGINGGEWXXXXXXX 180
                    PVT+GKSFRCGKC KSFRSNRALFGHRKVCRNEGEEDGINGGEWXXXXXXX
Sbjct: 121 ESKKSTAAMPVTMGKSFRCGKCEKSFRSNRALFGHRKVCRNEGEEDGINGGEWXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXHLQGSIRAAIDGSSRKLEIGLDLNLPAPLEEDDYSVVSFV 228
           XXXXXXXXXXXXXXXXX               KLEIGLDLNLPAPLEEDDYSVVSFV
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKLEIGLDLNLPAPLEEDDYSVVSFV 237

[Close]
BLAST of Carg24854 vs. NCBI nr
Match: XP_004147254.1 (PREDICTED: zinc finger protein ZAT4-like [Cucumis sativus] >KGN55858.1 hypothetical protein Csa_3G019980 [Cucumis sativus])

HSP 1 Score: 186.0 bits (471), Expect = 1.4e-43
Identity = 153/252 (60.71%), Postives = 161/252 (63.89%), Query Frame = 0 

Query: 3   ESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEML----WISTAQD- 62
           E HKC+LCSRSF NGRALGGHMKAHLATFSIEH+   KT +SPD EML     IS  QD 
Sbjct: 4   ERHKCRLCSRSFTNGRALGGHMKAHLATFSIEHQ---KTFKSPDLEMLSANGSISIVQDX 63

Query: 63  -RESETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQ---G 122
                                                     EDVAICLVMLSME+    
Sbjct: 64  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDVAICLVMLSMEKPSSW 123

Query: 123 KEQSRTPVT----------VGKSFRCGKCRKSFRSNRALFGHRKVCRNEG-EEDG----- 182
           K+QSRTP +          V KSFRCGKCRK+FRSNRALFGHRKVCR EG EEDG     
Sbjct: 124 KDQSRTPESEKSTAAMVGRVRKSFRCGKCRKTFRSNRALFGHRKVCRKEGEEEDGEXXXK 183

Query: 183 --INGGEWXXXXXXXXXXXXXXXXXXXXXXXXHLQGSIRAAIDGSSRKLEIGLDLNLPAP 228
             IN    XXXXXXXXXXXXXXXXXXXXXXX H+QGSIR AID SS KLEIGLDLNLPAP
Sbjct: 184 GMINXXXXXXXXXXXXXXXXXXXXXXXXXXXSHIQGSIRTAIDRSSSKLEIGLDLNLPAP 243

[Close]
BLAST of Carg24854 vs. TAIR10
Match: AT3G60580.1 (C2H2-like zinc finger protein)

HSP 1 Score: 94.4 bits (233), Expect = 9.9e-20
Identity = 87/285 (30.53%), Postives = 127/285 (44.56%), Query Frame = 0 

Query: 3   ESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIK-------TLRSPDPEMLWISTA 62
           ES+KC++C +SFVNG+ALGGHM++H++    E + P +        + S DP+  + S+ 
Sbjct: 2   ESYKCRVCFKSFVNGKALGGHMRSHMSNSHEEEQRPSQLSYETESDVSSSDPKFAFTSSV 61

Query: 63  --QDRESETESK----NPTRRRSKRTRRFKS------------ESPPSSE--PASSISDT 122
             +D ESE+ES     N TR+RSKRTR+  S              P S +  P SS SDT
Sbjct: 62  LLEDGESESESSRNVINLTRKRSKRTRKLDSFVTKKVKTSQLGYKPESDQEPPHSSASDT 121

Query: 123 SPEEDVAICLVMLSMEQGKEQSRTP--------------------VTVGKSFRCGKCRKS 182
           + EED+A CL+MLS ++ K+                          T    ++C  C K 
Sbjct: 122 TTEEDLAFCLMMLSRDKWKKNKSNKEVVEEIETEEESEGYNKINRATTKGRYKCETCGKV 181

Query: 183 FRSNRALFGHR------------KVCRNEGEEDGINGGEWXXXXXXXXXXXXXXXXXXXX 225
           F+S +AL GHR               R+E E D +                         
Sbjct: 182 FKSYQALGGHRASHKKNRVSNNKTEQRSETEYDNVVVVAKRIHECPICLRVFASGQALGG 241

[Close]
BLAST of Carg24854 vs. TAIR10
Match: AT1G02030.1 (C2H2-like zinc finger protein)

HSP 1 Score: 84.0 bits (206), Expect = 1.3e-16
Identity = 67/183 (36.61%), Postives = 87/183 (47.54%), Query Frame = 0 

Query: 1   MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLWISTAQDRES 60
           M E HKCKLC +SF NGRALGGHM++H+    +  +    +    DP  +     QDRES
Sbjct: 1   MEERHKCKLCWKSFANGRALGGHMRSHMLIHPLPSQPESYSSSMADPGFV----LQDRES 60

Query: 61  ETE-SKNPTRRRSKRTRRF-----------------------------KSESPPSSEPAS 120
           ETE SK P+R+RS+  RR                               SES    EP S
Sbjct: 61  ETESSKKPSRKRSRLNRRSISSLRHQQSNEEGKSETARAADIKIGVQELSESCTEQEPMS 120

Query: 121 SISD-TSPEEDVAICLVMLSMEQ------GKEQSRTPVTVGKSFRCGKCRKSFRSNRALF 147
           S+SD  + EEDVA+ L++LS ++                  K F C  C K F+S +AL 
Sbjct: 121 SVSDAATTEEDVALSLMLLSRDKWXXXXXXXXXXXXXXXXNKWFECETCEKVFKSYQALG 179

[Close]
BLAST of Carg24854 vs. TAIR10
Match: AT4G16610.1 (C2H2-like zinc finger protein)

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-14
Identity = 58/159 (36.48%), Postives = 79/159 (49.69%), Query Frame = 0 

Query: 1   MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIE-------------------------- 60
           M   HKCKLCS+SF NGRALGGHMK+HL +                              
Sbjct: 1   MQNKHKCKLCSKSFCNGRALGGHMKSHLVSSQSSARKKLGDSVYSSSSSSSDGKALAYGL 60

Query: 61  HENPIKTLR--SPDPEMLWISTAQDRESETESKNPTRRR--------------------S 112
            ENP K+ R  +PDPE   I  + + E+E ES +P ++R                    +
Sbjct: 61  RENPRKSFRVFNPDPESSTIYNS-ETETEPESGDPVKKRVRGXXXXXXXXXXXXXXVFEN 120

[Close]
BLAST of Carg24854 vs. TAIR10
Match: AT2G45120.1 (C2H2-like zinc finger protein)

HSP 1 Score: 50.8 bits (120), Expect = 1.3e-06
Identity = 19/32 (59.38%), Postives = 26/32 (81.25%), Query Frame = 0 

Query: 3  ESHKCKLCSRSFVNGRALGGHMKAHLATFSIE 35
          E +KC+ C +SF+NGRALGGHM++H+ T S E
Sbjct: 2  ERYKCRFCFKSFINGRALGGHMRSHMLTLSAE 33

[Close]
BLAST of Carg24854 vs. Swiss-Prot
Match: sp|Q9M202|ZAT9_ARATH (Zinc finger protein ZAT9 OS=Arabidopsis thaliana OX=3702 GN=ZAT9 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.8e-18
Identity = 87/285 (30.53%), Postives = 127/285 (44.56%), Query Frame = 0 

Query: 3   ESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIK-------TLRSPDPEMLWISTA 62
           ES+KC++C +SFVNG+ALGGHM++H++    E + P +        + S DP+  + S+ 
Sbjct: 2   ESYKCRVCFKSFVNGKALGGHMRSHMSNSHEEEQRPSQLSYETESDVSSSDPKFAFTSSV 61

Query: 63  --QDRESETESK----NPTRRRSKRTRRFKS------------ESPPSSE--PASSISDT 122
             +D ESE+ES     N TR+RSKRTR+  S              P S +  P SS SDT
Sbjct: 62  LLEDGESESESSRNVINLTRKRSKRTRKLDSFVTKKVKTSQLGYKPESDQEPPHSSASDT 121

Query: 123 SPEEDVAICLVMLSMEQGKEQSRTP--------------------VTVGKSFRCGKCRKS 182
           + EED+A CL+MLS ++ K+                          T    ++C  C K 
Sbjct: 122 TTEEDLAFCLMMLSRDKWKKNKSNKEVVEEIETEEESEGYNKINRATTKGRYKCETCGKV 181

Query: 183 FRSNRALFGHR------------KVCRNEGEEDGINGGEWXXXXXXXXXXXXXXXXXXXX 225
           F+S +AL GHR               R+E E D +                         
Sbjct: 182 FKSYQALGGHRASHKKNRVSNNKTEQRSETEYDNVVVVAKRIHECPICLRVFASGQALGG 241

[Close]
BLAST of Carg24854 vs. Swiss-Prot
Match: sp|Q39092|ZAT1_ARATH (Zinc finger protein ZAT1 OS=Arabidopsis thaliana OX=3702 GN=ZAT1 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.4e-15
Identity = 67/183 (36.61%), Postives = 87/183 (47.54%), Query Frame = 0 

Query: 1   MAESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLWISTAQDRES 60
           M E HKCKLC +SF NGRALGGHM++H+    +  +    +    DP  +     QDRES
Sbjct: 1   MEERHKCKLCWKSFANGRALGGHMRSHMLIHPLPSQPESYSSSMADPGFV----LQDRES 60

Query: 61  ETE-SKNPTRRRSKRTRRF-----------------------------KSESPPSSEPAS 120
           ETE SK P+R+RS+  RR                               SES    EP S
Sbjct: 61  ETESSKKPSRKRSRLNRRSISSLRHQQSNEEGKSETARAADIKIGVQELSESCTEQEPMS 120

Query: 121 SISD-TSPEEDVAICLVMLSMEQ------GKEQSRTPVTVGKSFRCGKCRKSFRSNRALF 147
           S+SD  + EEDVA+ L++LS ++                  K F C  C K F+S +AL 
Sbjct: 121 SVSDAATTEEDVALSLMLLSRDKWXXXXXXXXXXXXXXXXNKWFECETCEKVFKSYQALG 179

[Close]
BLAST of Carg24854 vs. Swiss-Prot
Match: sp|Q9SHD0|ZAT4_ARATH (Zinc finger protein ZAT4 OS=Arabidopsis thaliana OX=3702 GN=ZAT4 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 2.3e-05
Identity = 19/32 (59.38%), Postives = 26/32 (81.25%), Query Frame = 0 

Query: 3  ESHKCKLCSRSFVNGRALGGHMKAHLATFSIE 35
          E +KC+ C +SF+NGRALGGHM++H+ T S E
Sbjct: 2  ERYKCRFCFKSFINGRALGGHMRSHMLTLSAE 33

[Close]
BLAST of Carg24854 vs. TrEMBL
Match: tr|A0A0A0L275|A0A0A0L275_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G019980 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 9.1e-44
Identity = 153/252 (60.71%), Postives = 161/252 (63.89%), Query Frame = 0 

Query: 3   ESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEML----WISTAQD- 62
           E HKC+LCSRSF NGRALGGHMKAHLATFSIEH+   KT +SPD EML     IS  QD 
Sbjct: 4   ERHKCRLCSRSFTNGRALGGHMKAHLATFSIEHQ---KTFKSPDLEMLSANGSISIVQDX 63

Query: 63  -RESETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQ---G 122
                                                     EDVAICLVMLSME+    
Sbjct: 64  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDVAICLVMLSMEKPSSW 123

Query: 123 KEQSRTPVT----------VGKSFRCGKCRKSFRSNRALFGHRKVCRNEG-EEDG----- 182
           K+QSRTP +          V KSFRCGKCRK+FRSNRALFGHRKVCR EG EEDG     
Sbjct: 124 KDQSRTPESEKSTAAMVGRVRKSFRCGKCRKTFRSNRALFGHRKVCRKEGEEEDGEXXXK 183

Query: 183 --INGGEWXXXXXXXXXXXXXXXXXXXXXXXXHLQGSIRAAIDGSSRKLEIGLDLNLPAP 228
             IN    XXXXXXXXXXXXXXXXXXXXXXX H+QGSIR AID SS KLEIGLDLNLPAP
Sbjct: 184 GMINXXXXXXXXXXXXXXXXXXXXXXXXXXXSHIQGSIRTAIDRSSSKLEIGLDLNLPAP 243

[Close]
BLAST of Carg24854 vs. TrEMBL
Match: tr|A0A1S3BKU0|A0A1S3BKU0_CUCME (zinc finger protein ZAT4-like OS=Cucumis melo OX=3656 GN=LOC103491118 PE=4 SV=1)

HSP 1 Score: 172.2 bits (435), Expect = 1.4e-39
Identity = 143/255 (56.08%), Postives = 154/255 (60.39%), Query Frame = 0 

Query: 3   ESHKCKLCSRSFVNGRALGGHMKAHLATFSIEHENPIKTLRSPDPEMLWISTA------- 62
           E HKC+LCSRSF NGRALGGHMKAHLATFSIEH+   KT +SPD EM+ ++ +       
Sbjct: 4   ERHKCRLCSRSFTNGRALGGHMKAHLATFSIEHQ---KTFKSPDLEMVSVNGSISIVQXX 63

Query: 63  -QDRESETESKNPTRRRSKRTRRFKSESPPSSEPASSISDTSPEEDVAICLVMLSMEQ-- 122
                                                         VAICLVMLSME+  
Sbjct: 64  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAICLVMLSMEKPS 123

Query: 123 -GKEQSRTPVT----------VGKSFRCGKCRKSFRSNRALFGHRKVCRNEGE------- 182
             K+QSRTP +          V KSFRCGKCRK+FRSNRALFGHRKVCR EGE       
Sbjct: 124 SWKDQSRTPESEKSTAAMVGRVRKSFRCGKCRKTFRSNRALFGHRKVCRKEGEXXXXXXX 183

Query: 183 --EDGINGGEWXXXXXXXXXXXXXXXXXXXXXXXXHLQGSIRAAIDGSSRKLEIGLDLNL 228
                      XXXXXXXXXXXXXXXXXXXXXXX HLQGSIR AIDGSS KLEIGLDLNL
Sbjct: 184 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSHLQGSIRTAIDGSSSKLEIGLDLNL 243

[Close]
BLAST of Carg24854 vs. TrEMBL
Match: tr|V7CK74|V7CK74_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G058900g PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 2.9e-34
Identity = 134/296 (45.27%), Postives = 156/296 (52.70%), Query Frame = 0 

Query: 3   ESHKCKLCSRSFVNGRALGGHMKAHLATFSIE---------------------------- 62
           E HKCKLCSR+F NGRALGGHMKAHLAT  +                             
Sbjct: 2   ERHKCKLCSRTFANGRALGGHMKAHLATLPLPPKPQRLHHSLNTFSXXXXXXXXXXXXXX 61

Query: 63  -----------------HENPIKTLRSPDPEMLWISTAQDRESETESKNPTRRRSKRTRR 122
                             ENP K  R  DPE    S  QDRESETESKNPTRRRSKR RR
Sbjct: 62  XXXXXXXXXXXLINYALRENPKKCFRLADPEFNSGSVVQDRESETESKNPTRRRSKRPRR 121

Query: 123 FKSESP---------PSSEPASSISDTSPEEDVAICLVMLS----------------MEQ 182
             +  P          S EP SS+SDTSPEEDVA+CL+MLS                +E+
Sbjct: 122 PANSQPKARPKLSFMESPEPVSSVSDTSPEEDVAMCLMMLSRDRWSKNTNAAVGSDALEE 181

Query: 183 GKEQSRTPV---TVGKSFRCGKCRKSFRSNRALFGHRKVCRNEGEEDGINGGEWXXXXXX 226
            +E+S   +    V +  +C  C K+FRS+RAL  HR +C   G +  I       XXXX
Sbjct: 182 EEERSVEEIKLRRVRRKHQCESCEKTFRSSRALGSHRSICGGSGNDSKI-------XXXX 241

[Close]
BLAST of Carg24854 vs. TrEMBL
Match: tr|A0A2C9WDA0|A0A2C9WDA0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G039900 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.1e-33
Identity = 140/321 (43.61%), Postives = 164/321 (51.09%), Query Frame = 0 

Query: 3   ESHKCKLCSRSFVNGRALGGHMKAHLATFSIE---------------------------- 62
           E HKCKLC+R+F NGRALGGHMKAHLAT  +                             
Sbjct: 2   ERHKCKLCTRTFANGRALGGHMKAHLATLPLPPKTTIXXXXXXXXXXXXXXXXXXXXXXX 61

Query: 63  --------------------HENPIKTLRSPDPEMLWI----STAQDRESETESKNPTRR 122
                                ENP K+ R  DPE  +     S  QDRESETES+NPTRR
Sbjct: 62  XXEQEIKNREVEEKALVYGLRENPKKSFRFADPEFSFAVDAGSVVQDRESETESRNPTRR 121

Query: 123 RSKRTRR---------------------FKSESPPSSEPASSISDTSPEEDVAICLVMLS 182
           RSKRTR+                        ESP   EP SS+SDTSPEEDVA+CL+MLS
Sbjct: 122 RSKRTRKSGFAENQKQNFDVKKLKLKNLSSVESPTEPEPVSSVSDTSPEEDVAMCLMMLS 181

Query: 183 ------------MEQGKEQSRT---------PVTVGK---SFRCGKCRKSFRSNRALFGH 226
                        EQGK+  R+          + V K     RC KC K FRS++AL  H
Sbjct: 182 RDVWMRNNEEEDQEQGKDGERSIGMMLEEAEEIKVSKIRGKLRCEKCMKLFRSSQALGAH 241

[Close]
BLAST of Carg24854 vs. TrEMBL
Match: tr|A0A0A0KMX8|A0A0A0KMX8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G162030 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 5.6e-33
Identity = 112/268 (41.79%), Postives = 137/268 (51.12%), Query Frame = 0 

Query: 4   SHKCKLCSRSFVNGRALGGHMKAHLAT-----------------------------FSIE 63
           SHKCKLCSR+F NGRALGGHMKAHL                               + + 
Sbjct: 3   SHKCKLCSRAFTNGRALGGHMKAHLTAPXXXXXXXXXXXXXXXXXXXXXXXXXSTLYELR 62

Query: 64  HENPIKTLRSPDPEMLWISTAQDRESETESKNPTRRRSKRTRRFKSESPPSSEPASSISD 123
             +  +  R  DP  ++    QDRESETESKNPTR+RSKR R  K E  P  EPASS+SD
Sbjct: 63  GNSKGRNFRFSDP--VFNIVLQDRESETESKNPTRKRSKRWR--KPEVEP--EPASSVSD 122

Query: 124 TSPEEDVAICLVMLSMEQ------------GKEQSRTPVTVGKSFR----CGKCRKSFRS 183
            SPEED+A+CL+MLS ++              E+  + + V K  R    C KC++ FRS
Sbjct: 123 ASPEEDLAVCLMMLSRDRWIKNQNHNERRSSFEELGSKIRVKKGIRRKKKCEKCKEQFRS 182

Query: 184 NRALFGHRKVCRNEGEEDGINGGEWXXXXXXXXXXXXXXXXXXXXXXXXHLQGSIRAAID 226
            RALF H K+C++E EE+   G                           HL  S   +  
Sbjct: 183 YRALFSHEKICQSEQEEEQ-EGSRRRIFKCPFCYKLFGSGQALGGHKRSHLLSSTNNS-- 242

The following BLAST results are available for this feature:
BLAST of Carg24854 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022923480.14.8e-10599.56zinc finger protein ZAT9-like [Cucurbita moschata][more]
XP_023552986.11.1e-10197.80zinc finger protein ZAT9-like [Cucurbita pepo subsp. pepo][more]
XP_022965161.19.4e-9391.63zinc finger protein ZAT9-like isoform X2 [Cucurbita maxima][more]
XP_022965160.12.6e-9087.76zinc finger protein ZAT9-like isoform X1 [Cucurbita maxima][more]
XP_004147254.11.4e-4360.71PREDICTED: zinc finger protein ZAT4-like [Cucumis sativus] >KGN55858.1 hypotheti... [more]
BLAST of Carg24854 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G60580.19.9e-2030.53C2H2-like zinc finger protein[more]
AT1G02030.11.3e-1636.61C2H2-like zinc finger protein[more]
AT4G16610.11.3e-1436.48C2H2-like zinc finger protein[more]
AT2G45120.11.3e-0659.38C2H2-like zinc finger protein[more]
BLAST of Carg24854 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9M202|ZAT9_ARATH1.8e-1830.53Zinc finger protein ZAT9 OS=Arabidopsis thaliana OX=3702 GN=ZAT9 PE=2 SV=1[more]
sp|Q39092|ZAT1_ARATH2.4e-1536.61Zinc finger protein ZAT1 OS=Arabidopsis thaliana OX=3702 GN=ZAT1 PE=2 SV=1[more]
sp|Q9SHD0|ZAT4_ARATH2.3e-0559.38Zinc finger protein ZAT4 OS=Arabidopsis thaliana OX=3702 GN=ZAT4 PE=2 SV=1[more]
BLAST of Carg24854 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L275|A0A0A0L275_CUCSA9.1e-4460.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G019980 PE=4 SV=1[more]
tr|A0A1S3BKU0|A0A1S3BKU0_CUCME1.4e-3956.08zinc finger protein ZAT4-like OS=Cucumis melo OX=3656 GN=LOC103491118 PE=4 SV=1[more]
tr|V7CK74|V7CK74_PHAVU2.9e-3445.27Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G058900g PE=4 ... [more]
tr|A0A2C9WDA0|A0A2C9WDA0_MANES1.1e-3343.61Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G039900 PE=4 SV=... [more]
tr|A0A0A0KMX8|A0A0A0KMX8_CUCSA5.6e-3341.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G162030 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036236Znf_C2H2_sf
IPR013087Znf_C2H2_type
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24854-RACarg24854-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 5..27
e-value: 0.062
score: 22.4
coord: 166..188
e-value: 2.4
score: 17.2
coord: 127..147
e-value: 34.0
score: 8.5
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 168..188
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 7..27
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 127..156
score: 10.138
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 5..27
score: 9.577
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 166..188
score: 9.224
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 5..28
e-value: 2.4E-7
score: 30.5
coord: 166..190
e-value: 1.0E-8
score: 34.8
coord: 127..147
e-value: 0.0056
score: 16.5
NoneNo IPR availableGENE3DG3DSA:3.30.160.60coord: 107..190
e-value: 5.8E-8
score: 34.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..97
NoneNo IPR availablePANTHERPTHR26374:SF185C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEINcoord: 3..115
NoneNo IPR availablePANTHERPTHR26374FAMILY NOT NAMEDcoord: 124..226
coord: 3..115
NoneNo IPR availablePANTHERPTHR26374:SF185C2H2 AND C2HC ZINC FINGER-CONTAINING PROTEINcoord: 124..226
IPR036236Zinc finger C2H2 superfamilySUPERFAMILYSSF57667beta-beta-alpha zinc fingerscoord: 164..190
IPR036236Zinc finger C2H2 superfamilySUPERFAMILYSSF57667beta-beta-alpha zinc fingerscoord: 4..27
coord: 122..147