Carg24847 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATCCTCCAAAGAAAAGCTCTTCAAATCTGGATTCAATTGTGATCACATTCTTAACTCGAGTCCGAATGTATATTACGAAAAAGAAGTCTAAAGATATAGACGTGTCGAAAGGCAGCAGTGGCGGAGACGGAGAGGAAGAACTCCCGTCGAGTTCGAAGACGAAGAATGTGTACCCTCCCATTGAGACTTTCTGGTTCCCACCCTCGACAGTTGAGGTGACGATGGATGCACCAAAGGGCAGAGGCCTAGGCTCGAAGCTGCTTCACCCGCTAAGGTCACGGAGATCGTCGAGAGGAAGCTTGAAGAGGGCAATGGAAGAGAAACATGATCCAAAGGATGAAGAAGCCGTTGATAAGTTAAGGGAAATGCTTTTTCTCGAGGGCCAATTGCCAACCAAATTCAACGATTATCATACGCTTCTTAGGTGAGCTCTCGTCTCGTTGTTATGAAAATTTTATCGGTTGGGTTGGTTAATGAGCTCCGTAAATTCATTAATATATATATAATTTTTTCAATTATTTATTCTCGGGCAACTCTTAAAAATATATTTTTTTAAAAATTTTAATTAAATGCTTAAAAATAAATACATAGATTTTATTTTAAGGAACTAACATTTTACTTTTTTTTTTATTATTAAAAATAAATTGAATAAATAAATAATCCAACTAACCGGAACAAACCCAACTCAAAAAAATTATGGTTGAGTTGAGTTGGTCTAAAAAAGGTGTCGGTCCATCTCACGAACACTCCTAATTTAGTAAATACTCGAGTTAACATGTTAATATATATTGGCACGAAACCTAGCTATGTCGTGTTATATAATTGTAAGTAAAGTTATAAAGATTATGACCAAAATGAGTATGGTTTTGAAAATTAAACGACCAAAAATAGAAAAATGTTAGAAAGTTCGAGAATGAAAATATGAACGAGACTCGAATTTTAATTATTTGGTATTTTGTAAGATTATTGTTTTTATAAGAATTTAGGAAATATTTTAATATGGTTTTATTTTTATATGTTATTTAGATTCCTAAGGATGAGAGATTTTGATACGACAGCAGCAAAAGACACGTTTTTGAAATTCATCAAATGGCGTGAGGATTTTAGAACCGATGCACTTTCAAAGGTAATTCATAATTTTATGTGTTTTATTTTTTATATTTTTAATATTTTTCAAAAATACATTTTCTTTAAATTATTTTTACACGTAATTTTGTTTGATTTACTCGGTGTTCAAAATACTAATACTAAGTTTAAAATTGTATTTAAAACACTATGATTGGTTGCTGGTCGGGTGTGATTGATGGTCTTTAGTGAGTGGTGGTCGTCATCGACGGTGGACGATAGCCAAAAGTCAGTGATAATCGTGGTGATTGATGTGAGTTGTGGTTGCTGGTTGTTGCCATGGTGGAAAGGAAGGTAGAGAGATTAGGGGCGGGATAATATAAGGGTATTTTGGTCATTTTTATTTATTAGGAATTCACTCAAAAATATATTTTTTTTAAACAATCCTTTTGAGTTGTAGATAAATATAGCTAAAATGATTTTTTTTTTTCTAGTGAAAAGTCAACCCAAACACATCCTCAAGTTTCGAAAATTAAGGTTGTTGTTCCACTATGTTTCAAATGTTTCCTTAAAAAAATGAAATTATTGTGCGATGAAATAATGTTATAACTCCGCCATAAAAATTAAATTTTGGGTTTTGTTTAGTTTTTAAAAATTGACTATTGTCGGATGAAAGTTCGACATCTGCTAATTTAGGGAATAATCATGGGTTTATAATGAAGGAATACTCTCTTTATTGTAATGAAGCCTTTTCGGGAAACCCAAAGCAAAGTCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGAGTCGTGTTCATCTAACAATATCATATTAGAGTGGACAATACATTAATTCCGTCCTTGGATCAGATATCTATATGATTTCGAACGATTAATGTAGGGTTTTAAGTTTGAAGAGAAAGAAGAGGTGAAGAAATGGTACCCTCATGGGTTCCATGGAGTAGACAAATATGGAAGGCCAATATACATTGAAAGGCTTGGGATGGTTGATCTCAACAAATTGTTGCAAGTAACAACACTTGAGAGATTTGTGAAGTACCATGTTTATGAACAAGAGAAGACTTTGAGCATTAGATATCCTTCATGTTCTATTGAAGCCAAGAAGCACATTGCTTCTACTACAACAATTTTAGACGTCGGTGGTGCGGTAAGCATTGTTCTTTATCCCTTTCGTTCGATCGGTATATTCTCGGTAAACGTTTCATTTATAGCTTGCTTTGTGTGGGTTGAGATGTGTTGCACGATAGACAACATTGATGTCTACGTGTGGGTGTGTTTATATAGAAGTTTATGGTAAAAATTAGTAAGGGTCTTGTAACAGCTCAAGTCTACAGCTAATAGATATTGTCCTCGGTGTGTCAGTGAGGACGTTGAGCCACCAAAAGGGGTGGATTGTGAGATCCCACATCGGTTGGAGAGAGTAACGAAACATCTCTCCCTATCAAATGCGTTTTAAACCCTTGAGAGAAAGTTCAAAGAGGACAATATATGCTAGCGGTGGGCTTGAACTGTTACAAGTCTTGTTGAAATCATTTCTGTAAGATCCTACGTCGGTTGGAGAGGAGAACGAAAACACCCTTTATAAGAGTATGAAAATCTCTCACTAGCACGAGTTTTAAAAACCTTCAGAGAAAGTCCAAAGAGGATCATATCTATTAGCAGTGGGCCTGAGCTGTTACAATTTTTGACAAGGAGTATGTTTTACAAATTTTTTTTTTCTTCAGGGGGTGTCTAACTTCTCTAAACCTGCAAGATATCTCTTTACAGAAATTCAGAAGATTGATAGTAATTACTATCCCGAGGTACGTTGAAGAACATGTATTATTAATTGGTTAGTCCTCGTGCTTTATTAATCTTAGTTTTATTCCCGTTCTCATACCTTAATTTGTTTATTTTATTATGCATTATCACAAATAGCCAAATTCATGATTTTCTTAACAAAATGTATCCTAATAATTTAATTGAATTAATGGATCAATTTAAACATGGTTCAACTATAACTATCTAACAGTAAAACCAAATTAATATTGTTTTGCAGACATTAAATCGACTATTTATAGTGAATGCTGGGTCGGGGTTTAAGATGTTATGGAAAGCATTGAGGGCATTTCTCGATGCTCGCACGTTAGCTAAGATTCATGTTTGAAATTTTTTTTTTTTTTTTTAATTACATAAATTTTATTTCTTGCTTTTATTATCTCATCTCAAATCTATAATATCAGGTTTTGGGGAATAATTTTGTTCCCGAGCTACGTGAGATCATCGATCCAAGGTATCGTGTAACGTTTTGTGTTCTCTGTACTCTACTTTCATCGTTGTACTTTTAAATTTGTTCATTTTGGTCACTGTACTTTTAAAACGGCCATTTTAGTCATACTCGTACTTTTAAATAAGGCTGAATTAATAAAAATACTCATAAAATGTCAAAAGTTTCAATAATATCCTAAAAACGATTAATACTTTATTCAAATTTTATTCATAGTCTTCACTCTTTTTAAAAAACTTCAAAATTAGACTGTAAAAATATTTTTGAATTTTCTTTTAATAATAGTTTAAAATTTCATAAATATTTTTTAAATATAATATCAACGGTAAATACATCTTTTTAATATTTTAAAAAGGTTGAAGAGTCTTTTTTGAAAGAAAGTTAAGAATATTTGATATTTAAATTTTATGACATTTTAGTTATTAATGTAACCTGTATCGTGAATAAGTATGATATTTAAATTAATTATAATATATATAAAAAACAACCCGACAACCCTACCCAACCGGACTCAAAAATAGAGGGTGGTTAGATGGTTCGAGGTATCAATTCAACTAATCTGAAATTTCAAATTAGTTCGAAAGATTTTCCTAACCAAACTCAACCCAATTCAACCCGTGTACATCCCGATCCCGATAACCGATTGATCGACATATAAATTGATGGAAGTAAGTAAAAATTTGCAGTAATTTACCAAATTTCCTTGGTGGAAATTGTTGTTGTTCTGAATATGGAGGCTGCCTTTCAAGTGATAGAGGTCCATGGAACAACCCCTCGATTCTATCCATGCTTCAGGTCATTTTAACCCAAACAATTTTTATAATTTTTTTTTTTTTTAAAAAGCTATTTAATAAAATATTTATTTGATTTATTTTCAGCAGGTTCTCTCTTCAGCTGATGAAACTTATGATAACGAAGAAGAAAGTGGTTTGGCTTTAGAAGATGCTCGCCTAGACAAT ATCCTCCAAAGAAAAGCTCTTCAAATCTGGATTCAATTGTGATCACATTCTTAACTCGAGTCCGAATGTATATTACGAAAAAGAAGTCTAAAGATATAGACGTGTCGAAAGGCAGCAGTGGCGGAGACGGAGAGGAAGAACTCCCGTCGAGTTCGAAGACGAAGAATGTGTACCCTCCCATTGAGACTTTCTGGTTCCCACCCTCGACAGTTGAGGTGACGATGGATGCACCAAAGGGCAGAGGCCTAGGCTCGAAGCTGCTTCACCCGCTAAGGTCACGGAGATCGTCGAGAGGAAGCTTGAAGAGGGCAATGGAAGAGAAACATGATCCAAAGGATGAAGAAGCCGTTGATAAGTTAAGGGAAATGCTTTTTCTCGAGGGCCAATTGCCAACCAAATTCAACGATTATCATACGCTTCTTAGATTCCTAAGGATGAGAGATTTTGATACGACAGCAGCAAAAGACACGTTTTTGAAATTCATCAAATGGCGTGAGGATTTTAGAACCGATGCACTTTCAAAGTACCATGTTTATGAACAAGAGAAGACTTTGAGCATTAGATATCCTTCATGTTCTATTGAAGCCAAGAAGCACATTGCTTCTACTACAACAATTTTAGACGTCGGTGGTGCGACATTAAATCGACTATTTATAGTGAATGCTGGGTCGGGGTTTAAGATGTTATGGAAAGCATTGAGGGCATTTCTCGATGCTCGCACGTTAGCTAAGATTCATGTTCTCTCTTCAGCTGATGAAACTTATGATAACGAAGAAGAAAGTGGTTTGGCTTTAGAAGATGCTCGCCTAGACAAT ATGTATATTACGAAAAAGAAGTCTAAAGATATAGACGTGTCGAAAGGCAGCAGTGGCGGAGACGGAGAGGAAGAACTCCCGTCGAGTTCGAAGACGAAGAATGTGTACCCTCCCATTGAGACTTTCTGGTTCCCACCCTCGACAGTTGAGGTGACGATGGATGCACCAAAGGGCAGAGGCCTAGGCTCGAAGCTGCTTCACCCGCTAAGGTCACGGAGATCGTCGAGAGGAAGCTTGAAGAGGGCAATGGAAGAGAAACATGATCCAAAGGATGAAGAAGCCGTTGATAAGTTAAGGGAAATGCTTTTTCTCGAGGGCCAATTGCCAACCAAATTCAACGATTATCATACGCTTCTTAGATTCCTAAGGATGAGAGATTTTGATACGACAGCAGCAAAAGACACGTTTTTGAAATTCATCAAATGGCGTGAGGATTTTAGAACCGATGCACTTTCAAAGTACCATGTTTATGAACAAGAGAAGACTTTGAGCATTAGATATCCTTCATGTTCTATTGAAGCCAAGAAGCACATTGCTTCTACTACAACAATTTTAGACGTCGGTGGTGCGACATTAAATCGACTATTTATAGTGAATGCTGGGTCGGGGTTTAAGATGTTATGGAAAGCATTGAGGGCATTTCTCGATGCTCGCACGTTAGCTAAGATTCATGTTCTCTCTTCAGCTGATGAAACTTATGATAACGAAGAAGAAAGTGGTTTGGCTTTAGAAGATGCTCGCCTAGACAAT MYITKKKSKDIDVSKGSSGGDGEEELPSSSKTKNVYPPIETFWFPPSTVEVTMDAPKGRGLGSKLLHPLRSRRSSRGSLKRAMEEKHDPKDEEAVDKLREMLFLEGQLPTKFNDYHTLLRFLRMRDFDTTAAKDTFLKFIKWREDFRTDALSKYHVYEQEKTLSIRYPSCSIEAKKHIASTTTILDVGGATLNRLFIVNAGSGFKMLWKALRAFLDARTLAKIHVLSSADETYDNEEESGLALEDARLDN
BLAST of Carg24847 vs. NCBI nr
Match: XP_022923475.1 (phosphatidylinositol/phosphatidylcholine transfer protein SFH11 isoform X1 [Cucurbita moschata]) HSP 1 Score: 419.5 bits (1077), Expect = 8.2e-114 Identity = 245/381 (64.30%), Postives = 247/381 (64.83%), Query Frame = 0
BLAST of Carg24847 vs. NCBI nr
Match: XP_022923476.1 (phosphatidylinositol/phosphatidylcholine transfer protein SFH11 isoform X2 [Cucurbita moschata]) HSP 1 Score: 373.6 bits (958), Expect = 5.1e-100 Identity = 221/348 (63.51%), Postives = 227/348 (65.23%), Query Frame = 0
BLAST of Carg24847 vs. NCBI nr
Match: XP_022923478.1 (phosphatidylinositol/phosphatidylcholine transfer protein SFH11 isoform X3 [Cucurbita moschata]) HSP 1 Score: 372.9 bits (956), Expect = 8.8e-100 Identity = 215/313 (68.69%), Postives = 218/313 (69.65%), Query Frame = 0
BLAST of Carg24847 vs. NCBI nr
Match: XP_022965056.1 (phosphatidylinositol/phosphatidylcholine transfer protein SFH11 isoform X1 [Cucurbita maxima]) HSP 1 Score: 368.6 bits (945), Expect = 1.7e-98 Identity = 223/380 (58.68%), Postives = 231/380 (60.79%), Query Frame = 0
BLAST of Carg24847 vs. NCBI nr
Match: XP_023553029.1 (phosphatidylinositol/phosphatidylcholine transfer protein SFH11 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 365.2 bits (936), Expect = 1.8e-97 Identity = 224/383 (58.49%), Postives = 228/383 (59.53%), Query Frame = 0
BLAST of Carg24847 vs. TAIR10
Match: AT5G47510.1 (Sec14p-like phosphatidylinositol transfer family protein) HSP 1 Score: 143.7 bits (361), Expect = 1.6e-34 Identity = 84/221 (38.01%), Postives = 112/221 (50.68%), Query Frame = 0
BLAST of Carg24847 vs. TAIR10
Match: AT4G36490.1 (SEC14-like 12) HSP 1 Score: 125.9 bits (315), Expect = 3.4e-29 Identity = 78/237 (32.91%), Postives = 113/237 (47.68%), Query Frame = 0
BLAST of Carg24847 vs. TAIR10
Match: AT4G34580.1 (Sec14p-like phosphatidylinositol transfer family protein) HSP 1 Score: 124.4 bits (311), Expect = 9.9e-29 Identity = 80/237 (33.76%), Postives = 110/237 (46.41%), Query Frame = 0
BLAST of Carg24847 vs. TAIR10
Match: AT2G18180.1 (Sec14p-like phosphatidylinositol transfer family protein) HSP 1 Score: 123.2 bits (308), Expect = 2.2e-28 Identity = 76/237 (32.07%), Postives = 111/237 (46.84%), Query Frame = 0
BLAST of Carg24847 vs. TAIR10
Match: AT2G21540.1 (SEC14-like 3) HSP 1 Score: 119.8 bits (299), Expect = 2.4e-27 Identity = 81/237 (34.18%), Postives = 113/237 (47.68%), Query Frame = 0
BLAST of Carg24847 vs. Swiss-Prot
Match: sp|F4JYJ3|SFH11_ARATH (Phosphatidylinositol/phosphatidylcholine transfer protein SFH11 OS=Arabidopsis thaliana OX=3702 GN=SFH11 PE=3 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 2.8e-33 Identity = 84/221 (38.01%), Postives = 112/221 (50.68%), Query Frame = 0
BLAST of Carg24847 vs. Swiss-Prot
Match: sp|Q94A34|SFH12_ARATH (Phosphatidylinositol/phosphatidylcholine transfer protein SFH12 OS=Arabidopsis thaliana OX=3702 GN=SFH12 PE=2 SV=1) HSP 1 Score: 125.9 bits (315), Expect = 6.1e-28 Identity = 78/237 (32.91%), Postives = 113/237 (47.68%), Query Frame = 0
BLAST of Carg24847 vs. Swiss-Prot
Match: sp|F4JLE5|SFH1_ARATH (Phosphatidylinositol/phosphatidylcholine transfer protein SFH1 OS=Arabidopsis thaliana OX=3702 GN=SFH1 PE=2 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 1.8e-27 Identity = 80/237 (33.76%), Postives = 110/237 (46.41%), Query Frame = 0
BLAST of Carg24847 vs. Swiss-Prot
Match: sp|Q9SI13|SFH10_ARATH (Phosphatidylinositol/phosphatidylcholine transfer protein SFH10 OS=Arabidopsis thaliana OX=3702 GN=SFH10 PE=3 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 4.0e-27 Identity = 76/237 (32.07%), Postives = 111/237 (46.84%), Query Frame = 0
BLAST of Carg24847 vs. Swiss-Prot
Match: sp|Q93ZE9|SFH3_ARATH (Phosphatidylinositol/phosphatidylcholine transfer protein SFH3 OS=Arabidopsis thaliana OX=3702 GN=SFH3 PE=2 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 4.4e-26 Identity = 81/237 (34.18%), Postives = 113/237 (47.68%), Query Frame = 0
BLAST of Carg24847 vs. TrEMBL
Match: tr|A0A1S3BLA9|A0A1S3BLA9_CUCME (phosphatidylinositol/phosphatidylcholine transfer protein SFH11 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490891 PE=4 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 4.6e-81 Identity = 177/304 (58.22%), Postives = 197/304 (64.80%), Query Frame = 0
BLAST of Carg24847 vs. TrEMBL
Match: tr|A0A1S4DX79|A0A1S4DX79_CUCME (phosphatidylinositol/phosphatidylcholine transfer protein SFH11 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490891 PE=4 SV=1) HSP 1 Score: 310.1 bits (793), Expect = 4.6e-81 Identity = 177/304 (58.22%), Postives = 197/304 (64.80%), Query Frame = 0
BLAST of Carg24847 vs. TrEMBL
Match: tr|A0A1S4DX84|A0A1S4DX84_CUCME (phosphatidylinositol/phosphatidylcholine transfer protein SFH11 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103490891 PE=4 SV=1) HSP 1 Score: 265.0 bits (676), Expect = 1.7e-67 Identity = 168/337 (49.85%), Postives = 190/337 (56.38%), Query Frame = 0
BLAST of Carg24847 vs. TrEMBL
Match: tr|A0A0A0L289|A0A0A0L289_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G020070 PE=4 SV=1) HSP 1 Score: 256.9 bits (655), Expect = 4.6e-65 Identity = 176/382 (46.07%), Postives = 199/382 (52.09%), Query Frame = 0
BLAST of Carg24847 vs. TrEMBL
Match: tr|U5GTZ0|U5GTZ0_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G158700v3 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 2.2e-51 Identity = 134/313 (42.81%), Postives = 171/313 (54.63%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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