Carg24833 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTTGATCGAGCTGAGGAGAATTGAAGCATCAAGGGAGATTGCATCCACCCTCGCCAAGTCGCCGAATGTGGCCTACTTGCCCGGTGGTCAGAACATGCTTTTGGCTCTCAATTCGAATCGTTGAATGAATTGGTAAGCTAATAAACTCGTATCACGTTATTGATATATGTTTCTTGCTTTAGTCTGGTATGTGTTTGATTCATTAAAACTATGGGTGAACATGTCATTTCTAATCTTTTTAGTGTTACAATCCAATGTGATATCATTATCAACGAGTCTGATCTAATTGAGAAGTCATGTATGGAATGAGACGTTAAAAGTTTTTCCAAGAAAAATAATGCAGTATTAGCTGTTCAATTCGTCCACGAGATGACATTTTAGTTTTTTGTACGTTGAATCAGTGAAAGCCAAGCCCCTTGTGTTATCTCTAAGACTATTTTTTTATTGTTCTTATGTTTTTTTTTATTAAGCAACAGATTGCCATGTTCATCAACTAGCGATATCAGTTGAAGAGTCTAGAAAAGAACTACAGTATATTATATTTATATTGTAAATAAGTAAAATGGCAAACATCATAAGATATGAACCCCAGGCACAAGGTACACAATCTATACTTCAGATTCTTGTTTCTAAATACCAAGTGTAGGGGAACTGAAAAGAAATCATGGCTTAAGATTCTCCTTGATAGAGTTAGTATGGAGGGCTTGTGAAAAGTAATCATGGCTGAAGATTGTTTTGAATCATGTTGTTTTTAGTAGACGATGAAAGTCAGAATCAACTAATCTTGGGATGTGAATTCAGTCCCTTAAGGGTAGCAGGCTTTGGCTTGCTTATCTTTGTGCTATTTTTTTTTTTTTTTTTTGGGGGGGGGGGGGGGGGGGGATGAAAAATATGTAGGGGAGCTTTGGTTCCTGATTGGACTTCATTTTTCTCTTTGCGTTTCCGCATGTTAAGACTTTTGTAATTTTCTTTAAGGCCTTGTTTTGCATGATTGTGCCCCTCTCCTTTGGGTGTTCCTTTTGTATTCCCCCTGTATTCTTTGAATGGATAGGAATACTAAGAAATATGGTTTGGATATGAGAGAGAGATTATAGAAAAGATAAGAAATGAATGGGAAGAGTTAACAACCTGACGCAGTAGTAGAGGTAAGAAAGAGACTTGGGTGCGATTGGATTATTGTGCCTCCAGTTTGAGTCGGGAGGGAGATAGGACTTAGATGTATAAGTAAGAGATCTGAAGTGAGAACAAGGTTAGAGGGGATATGTGAAGAAGTGAGAAGGATCTCATCTTGCTTGTCACTTGTGCCTCATTTAGCATGCTCTAAAGGTGTGTGCCTTTGCGTAGTTGCTTGCCAGAGAGCTTTTGCCCATAGAATGCTTTTGCAATTTGGAATGACTTAGTAATCTTTGTCTTAGATATTAACATCATGCAAATTTACCAATTCCTGGAGTTGCACTTTCAGGTAGGAAGTCTTGTGAAATTAGTGCAAATGCTCAATTGGTCGATGTATACACATTTCTTTAAGAAATAATAATCAGTGATGGTTATGGTCAAAGTTTTCAGCTTGGGCATGTTGTGGGGCTTATCTGTGCATGTACAAAATCACTGGATGGAACAAGTAGAAAGAGGGCATACTGACTTTTGGTATGGTTGCTTCATTGTGATTGGAACTTTAGGATATATGAATTTATATGTTCTGTTCAGCTTTGGTCCGATAGTTAAGGCTTATTGCAAATAATTCTTCATAACTGCAAGGCAAACACCAGATACTTTAGGTGTTGATTCATTCATTTAGTTTTTCTTATAGCCTTATTGTGATGTCCCACGTCAGTTGGGGAGGAGAACAAAACACCCTTTATAAGGGGGTGGAAACCTTTCCTTAGCAGACGCGTTTTAAAGCCTTGAGGGGAAGCTTGAAAGGGAAAGCCCAAAGAGGACAACATTTGCTAGCGGTGGATCTGGGCCATTACACTTATTTATTTATTTATTTATTCTCCCAGGACCTCAACAGGAAAAATTTGGTGGAAAAACAAGGTTTCTGTACTGGCATGAATGGGGGTTGTGGGGGGATGAAATGTATGGTGGGCGTAATCCTCTAAATCATTAAGCTTTCAATCATCTGATCATTTTCAATCTTTGGCTACAGACTCTTGGTTTATATTTCCAATTGGTCGGGTTGAAATTATTTTCCTCTAACACTATCTCAAGACTTCTATGATAGAGTTAATCTAACGAGTAATTGTCCCCGTTAAACTCTAGGTTTACAGAAAACTCGTATTTACTTGCAGGGTATCTTTGTAGGTGTGCACAGAACGGAAGGATGATCTGCTGATTGACTCGTCTCAAACTTAGAGCTCTACCCCACGGTATGCGTAATGGTAAATGAACATCATAGAATAAGAGTTTTTAGACATTTTCTGTCTCATAAAAATTAGTCCGATGATCGAACATATTCTTGATTCAGCAATTGTTTTCATTTAAGTTTTTGCCTTTTTGAGGGACTCCCTCTTCTCTTGTGAGCACGTCTTATTTGAACATAAGGCCCGTTTCTTTCAGTATAAAGAATGGAGTTTGGTGGTCTTTGTAATTTTGTTTTATTCCTTATTGCATCATAATATAAAGTAAAAATAACGTTAGATATGTTAAAAAAAAAAGTTTATAGATAATGGTTAAGATTTAAATCTAGAATCATATTCTTTGAATTGTGCTTCATCAATCATCAGTCAATTTAGAATTGTGTTTGGGCTGTTGAACCTTCTGTTTTACTCAATGTTTCTATACATCAAATATGCAAATTAATAAAAGATCGTCTAAAGAATAAGTTTGACCGAGAGTTTCATTAAGTAAAAGGAAATAAAAGATCATCCCCCAAGGAAACTCGATATTAAAAAGAACTAGAAAGTAATTAAGTTCTTAATTTGGGCTTAAAACAAAAATCGATGCAAGTTGGAACTGGAACTTGAGGCACAATGGAGTAGCACAGGAGGGCAGACACAGATAGATA ATGGGTTTGATCGAGCTGAGGAGAATTGAAGCATCAAGGGAGATTGCATCCACCCTCGCCAAGTCGCCGAATGTGGCCTACTTGCCCGGTGATTGCCATGTTCATCAACTAGCGATATCAGTTGAAGAGTCTAGAAAAGAACTACAGGGAACTGAAAAGAAATCATGGCTTAAGATTCTCCTTGATAGAGTGTGCACAGAACGGAAGGATGATCTGCTGATTGACTCGTCTCAAACTTAGAGCTCTACCCCACGGTATGCGTAATGGTAAATGAACATCATAGAATAAGAGTTTTTAGACATTTTCTGTCTCATAAAAATTAGTCCGATGATCGAACATATTCTTGATTCAGCAATTGTTTTCATTTAAGTTTTTGCCTTTTTGAGGGACTCCCTCTTCTCTTGTGAGCACGTCTTATTTGAACATAAGGCCCGTTTCTTTCAGTATAAAGAATGGAGTTTGGTGGTCTTTGTAATTTTGTTTTATTCCTTATTGCATCATAATATAAAGTAAAAATAACGTTAGATATGTTAAAAAAAAAAGTTTATAGATAATGGTTAAGATTTAAATCTAGAATCATATTCTTTGAATTGTGCTTCATCAATCATCAGTCAATTTAGAATTGTGTTTGGGCTGTTGAACCTTCTGTTTTACTCAATGTTTCTATACATCAAATATGCAAATTAATAAAAGATCGTCTAAAGAATAAGTTTGACCGAGAGTTTCATTAAGTAAAAGGAAATAAAAGATCATCCCCCAAGGAAACTCGATATTAAAAAGAACTAGAAAGTAATTAAGTTCTTAATTTGGGCTTAAAACAAAAATCGATGCAAGTTGGAACTGGAACTTGAGGCACAATGGAGTAGCACAGGAGGGCAGACACAGATAGATA ATGGGTTTGATCGAGCTGAGGAGAATTGAAGCATCAAGGGAGATTGCATCCACCCTCGCCAAGTCGCCGAATGTGGCCTACTTGCCCGGTGATTGCCATGTTCATCAACTAGCGATATCAGTTGAAGAGTCTAGAAAAGAACTACAGGGAACTGAAAAGAAATCATGGCTTAAGATTCTCCTTGATAGAGTGTGCACAGAACGGAAGGATGATCTGCTGATTGACTCGTCTCAAACTTAG MGLIELRRIEASREIASTLAKSPNVAYLPGDCHVHQLAISVEESRKELQGTEKKSWLKILLDRVCTERKDDLLIDSSQT
BLAST of Carg24833 vs. NCBI nr
Match: XP_002300084.2 (prohibitin-3, mitochondrial [Populus trichocarpa] >XP_024449423.1 prohibitin-3, mitochondrial [Populus trichocarpa] >PNT58048.1 hypothetical protein POPTR_001G335700v3 [Populus trichocarpa] >PNT58049.1 hypothetical protein POPTR_001G335700v3 [Populus trichocarpa] >PNT58050.1 hypothetical protein POPTR_001G335700v3 [Populus trichocarpa] >PNT58051.1 hypothetical protein POPTR_001G335700v3 [Populus trichocarpa]) HSP 1 Score: 60.5 bits (145), Expect = 3.0e-06 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0
BLAST of Carg24833 vs. NCBI nr
Match: XP_010265468.1 (PREDICTED: prohibitin-3, mitochondrial-like [Nelumbo nucifera]) HSP 1 Score: 60.5 bits (145), Expect = 3.0e-06 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0
BLAST of Carg24833 vs. NCBI nr
Match: XP_011045196.1 (PREDICTED: prohibitin-3, mitochondrial [Populus euphratica] >XP_011045197.1 PREDICTED: prohibitin-3, mitochondrial [Populus euphratica]) HSP 1 Score: 60.5 bits (145), Expect = 3.0e-06 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0
BLAST of Carg24833 vs. NCBI nr
Match: XP_014499851.1 (prohibitin-3, mitochondrial [Vigna radiata var. radiata]) HSP 1 Score: 60.5 bits (145), Expect = 3.0e-06 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0
BLAST of Carg24833 vs. NCBI nr
Match: XP_022955467.1 (prohibitin-3, mitochondrial-like [Cucurbita moschata]) HSP 1 Score: 60.5 bits (145), Expect = 3.0e-06 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0
BLAST of Carg24833 vs. TAIR10
Match: AT5G40770.1 (prohibitin 3) HSP 1 Score: 59.3 bits (142), Expect = 1.2e-09 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0
BLAST of Carg24833 vs. TAIR10
Match: AT3G27280.2 (prohibitin 4) HSP 1 Score: 57.8 bits (138), Expect = 3.6e-09 Identity = 27/30 (90.00%), Postives = 30/30 (100.00%), Query Frame = 0
BLAST of Carg24833 vs. TAIR10
Match: AT5G14300.1 (prohibitin 5) HSP 1 Score: 47.4 bits (111), Expect = 4.8e-06 Identity = 21/29 (72.41%), Postives = 26/29 (89.66%), Query Frame = 0
BLAST of Carg24833 vs. Swiss-Prot
Match: sp|O04331|PHB3_ARATH (Prohibitin-3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PHB3 PE=1 SV=1) HSP 1 Score: 59.3 bits (142), Expect = 2.2e-08 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0
BLAST of Carg24833 vs. Swiss-Prot
Match: sp|Q9LK25|PHB4_ARATH (Prohibitin-4, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PHB4 PE=1 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 6.5e-08 Identity = 27/30 (90.00%), Postives = 30/30 (100.00%), Query Frame = 0
BLAST of Carg24833 vs. Swiss-Prot
Match: sp|Q9LY99|PHB5_ARATH (Prohibitin-5, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PHB5 PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 8.7e-05 Identity = 21/29 (72.41%), Postives = 26/29 (89.66%), Query Frame = 0
BLAST of Carg24833 vs. Swiss-Prot
Match: sp|Q9BKU4|PHB1_CAEEL (Mitochondrial prohibitin complex protein 1 OS=Caenorhabditis elegans OX=6239 GN=phb-1 PE=1 SV=1) HSP 1 Score: 43.9 bits (102), Expect = 9.6e-04 Identity = 19/30 (63.33%), Postives = 25/30 (83.33%), Query Frame = 0
BLAST of Carg24833 vs. TrEMBL
Match: tr|B9GJB2|B9GJB2_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G335700v3 PE=4 SV=2) HSP 1 Score: 60.5 bits (145), Expect = 2.0e-06 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0
BLAST of Carg24833 vs. TrEMBL
Match: tr|A0A2P2K8E3|A0A2P2K8E3_RHIMU (Uncharacterized protein MANES_17G107000 OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.0e-06 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0
BLAST of Carg24833 vs. TrEMBL
Match: tr|A0A1S3U1G2|A0A1S3U1G2_VIGRR (prohibitin-3, mitochondrial OS=Vigna radiata var. radiata OX=3916 GN=LOC106760920 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.0e-06 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0
BLAST of Carg24833 vs. TrEMBL
Match: tr|A0A1U8AEQ1|A0A1U8AEQ1_NELNU (prohibitin-3, mitochondrial-like OS=Nelumbo nucifera OX=4432 GN=LOC104603193 PE=4 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 2.0e-06 Identity = 30/30 (100.00%), Postives = 30/30 (100.00%), Query Frame = 0
BLAST of Carg24833 vs. TrEMBL
Match: tr|B9RBN7|B9RBN7_RICCO (Prohibitin, putative OS=Ricinus communis OX=3988 GN=RCOM_1679310 PE=4 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 2.6e-06 Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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