Carg24816 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAACTCGTTTTTTCTCAGAGTCGGTCCGTGAAGAAACACCGTCGTTAGGCTACGTTTATTTCACTGGTGCACCATACCTAAACCACCTCTTCTCTCCCTCGCGGTCTTGTCTCGTCTTCCTTCTCTCCACCTAGGTTAGTATTTATACTCCGCTTCCTTGTCTTCATCATTGTTCTAATAATTCTTTGGTTTGAATCGATGTTCGATTTCTGGTGAAGCTTTATCGATTGGACTCATGTTTTTAATTCTTAGGTTTTGGTTGTAATTTCAAAATTCTAGAGGTTCCATGGCCTCTTCTGTAGCTGAGAACCGTCAGGAGAAGTTGGCATCCATGCTTGACCAGCTCTATTTAGAATGTGGCATTCTACATAAAATGATTTATAAGAACAAGAATCAGCATCGCCGGAGTTCCTATTTTCGATATCTTTTGCAGGTTTTCATCTCCCTCCCTCTAAGAAAATTGTGGTTGATTGATTAGTTACTGAGAAAAGAAAACTAAATTGCGAGAAAAGAAGTGCATGGAATTTTTCTTGTAGGAGGAGAATATTGCTTTTATACGTATATGTTAGCCTGTGTAAATATATGTTCATACAAGCAATAGGTGGGAAACATTTTCATATTGATGACACCAGTTGAAAGGAAAGGGGACATTGTGACACAAGACCAAGAGTCATAGGAAGTATGTAGTTAAGTTGGTGAAATCATTCACTCAGTGTTAGATGAAGAATTTGCGATTTTTGGCATACATTGTAACTTTTCTTGCGTCTATAAAAAATGTTAGGTAAGGAGAGATTTAAGACTTCTACAAGCTGCCAAGTTAGAGGAGTTGGTAAATTCCTGCTTTCAAGTTATCGATGGAAAGAAACCTAAGCAAAAGATTCATTTTTTAGAAAGGTATGTGATTTTGAGTTCCTTCTCCTCATGAATTTTTTTTTTCTATTTAGCATATAGTAAAGAGATGACTAGATTATAAATGTATGTATTCGTTTTCCTTTGATCTTCTGTTTTGACTTTCTATTTTGTTACAGTTTGAAACGGAGGAAATGTGAAGTTGGGAAATATAATTTCATGGAACAGCTTCTGGGGGCTGCACGCCTACTATCAGAGGTGATTTTTCTATTGACTTTGTCTCTTTGCATGATTAATTGGGAGTCTTTATATAGAATGTTCATTCTCTTTCTATATGTTTATGCTTATGATTGAAAAAGATCATGGTGTATTCCTATACCAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAAAAAAGAAAGAAGGAGATTATGATATAGTATATTATCTAAATCTATTTTGCTTGATGTAAGCTGTTCCATTTTCACTAAAAAATATTTTCAAGTAGTTGGGCTTTGTTTTGAATGAGAGGTCAATCAAGGGTTATTCTTTGCTATTGAACTCAAGGGGCAATGATTCTACTGTTATGGAAATTATAAAATGATGTTCACTTTACGTCGTAGATTACCCCTTTGGACATTGTATTGAAGGGATCTTTTTCCAAACCTTTTGCAGATGGTGGAGCCAATTTTTAAGGCAGCAACGTATCCTTTTTATCTATTGGTCTAATGCATTAGAGATAAGTTGGTGTCGCTTGCTGCTTTCTGTTTGCTCAAATTCATTTTAGTATCCATGAGAATCTTTATAGTGGTGTAAGTTGGATTTCTTCAATGGCTATTCAATTAGTCTTCCTGTATGTCCAACAGTGGAAATGGAAAACATGCCCTGTATTGCACAGCGTTTCGTATGAAAGCTGGCTGGCTTATTTACTTGGTTAACTTGATCATTTGACTACTTGACAGGCATATATGATATGTAACTTCATGTTTTCCTTAATATAAAACGTGAAGCTGTTAGATCGTATTACATTACATCAATTATGTACAGCAACTCACATCAGCATCTTTCAGTGTTAGATATTTGTATGTAAAAAGGTTTTTGACAATATTGACATTTTTGGACCTATTGGATTCTTGCTCCTGCCTTCTTGTATTTTCTATATCTTGGTTGTGTTTTGGGCATTCTTGAGATTCAGCAGTCATTCTTTTTTGTTTTTGCCCACTTCATAAGTTTGCTAGTTAATGCACCTTCACATAAGTGAGAAGTTCAATAGTGAGAACGTTTCCCACTTAGATGGTTATGTAAAATAAGTGCTTTGTTTTCTATCTCTGCCTCGGAAACATTTACATCATTGCCTTGAATTTGGTGCTGTTAAAATCTTGTCTGGCACATTATATGGTTGTATATAACACCAATGTTTTTTTTATTCACAGTTGTTGAATGCTTACTTTTCGGCATTTGTGACAATTACCTTGAAATGATGTCTTCTTACCTGGAGCTAATTTGTTTGTTAGACGATGGAAACTAATTTGAAGAAATTCATTGTGCAAATATCATCCTTGACTATTATCAGTGAGATATCTATCTTGCTTGCTCGAACATTTTTCACAGGGTTTTGCTTTATAATTTTGGCATTACTGGCACGTATTCGGGTGTTGGTTCAACAAGTAAGTTCCATTTTTATTAATAAATATTTAAGAAAAGCAGGAATCATTTGACATTTCAAGGTTAGGATTTTCAGAAACTTTCAAAGGATTGCATGACAATTGAGAGTACATTGTCATTTTTCTGAAATGGAAATTGTGGCAACATAATTACCATCTCTAACTTTGATTATTTTATGTTTATGATGAATTTGCATTCCCGTTAACCATCTGTTTCTTTATTGTTTTATACAGATATTACTCGATGTTGTTTCAATATTCAACATGGTTGCGTCTATCTCCAAAAAAAAGCATGTAGTTACAATAAACCAGGAAGGAATTCAGGTATATGGGCTCCACTCTTCCATTCTTTTCCAAATTGCAAAGCCAGCTTCTGTATAACCAAGGGATTCTTAATCTGTTCCACTAGGGTTCTCATATCTGCTTTTCTAATTATCTTCACAAAATAGAAGTTTTTAAATTCTTTTCCAATATATTTACAGGTCTTTAGAGAGTTTTACCCTACAAATGATGAATTTGTCCTCTTAGAGTGTGTTTGGAAAGAAGATAAATTTATATTGCAAGAAAACAAACAAGAAGTTGCGACTAACAATCAGGAAGAACATATTGGGCCAAATGTTTCTTCGACAGCATCAGCTGTGCGGTATCAGAGCCTTGAATCTTTTCTTGGAGGTAAGGTTTTTAATGGTATTATACTCGTGACTCCCTTCACATACCTTTCTTAATATATATATGTGCGTGCGCGTTCTTCATCACCTTTTAATAAAGTATCCAATATTCCTCTTTGTCAATTGCATTTCAGCAGTAATACACTATGCTTCTTTGTAGAGCTAACTAACCGAACACAATTGCAATGTCTAGGAACCGCCATTTTTCTGTCTTCTAATTCTTTGTATGCAGACTTGATTTTTGTTTTCATCTTATTATGAAAAGAAAAATAAACTGTAGTGTACTTGTATTTCTTCTTTTTGGGTGTAGATGATGAACTTGCTACCAAGCAGGCAGAGGCAAATCAAAGTAATGACGAAGCTCTTGATCTAATGAAAATGAATAAGAATGATTTGCTAGCAAGCCCTTCCAAAAGAGTTAACGATATTTCTGTCAAGGATATTACAGAAACAAAAGACAGTTCAATCAGTCCTGCAGCGACCTCGAGCCAGACATTCGTGCCTCGAGAAGGTAGTTCTCTTGTAAATTCAAGCCCCTCGTTGGTTGGTGCAAAAAAACTGCATTCGAAGAGGCCAGCATTTGTTTCAATTAAGCTTCCCAACCCGATTACAACTAGTGCAGTGGGAATTCAATTCAATGAAACCAAAGCTGATAGTGTGGAGAAGGAGGATCCATTTTTCGCTTTGCTCACCGGTGGGAAACGCAAAAGCAGTCTATTTTAGCAGTAGAGAGAATTCTAGTAAGTAGTCTTATTTTTTTTATTAGAAAGTGCATAAATGCATTTTGTTTATGAAATATCATCCAATAGTATTTATTCATAAAATTTGAGAGCAGTGCTGTAGAATCATGTATGATTATAGATAGATAGATAGATAGATAGGTAAAATCAAGTTTAATCCTTGGAGTTTAGGCTTAATTGATAATGTTCTTGTTTTCTGAACTTGTCTATGATGTTTATCAACATTCTCAGAGAAAATGAAAGCCAAAGATCATTACTAGTCATTCAAAAGACTCCAAAAAC AAACTCGTTTTTTCTCAGAGTCGGTCCGTGAAGAAACACCGTCGTTAGGCTACGTTTATTTCACTGGTGCACCATACCTAAACCACCTCTTCTCTCCCTCGCGGTCTTGTCTCGTCTTCCTTCTCTCCACCTAGGTTTTGGTTGTAATTTCAAAATTCTAGAGGTTCCATGGCCTCTTCTGTAGCTGAGAACCGTCAGGAGAAGTTGGCATCCATGCTTGACCAGCTCTATTTAGAATGTGGCATTCTACATAAAATGATTTATAAGAACAAGAATCAGCATCGCCGGAGTTCCTATTTTCGATATCTTTTGCAGGTAAGGAGAGATTTAAGACTTCTACAAGCTGCCAAGTTAGAGGAGTTGGTAAATTCCTGCTTTCAAGTTATCGATGGAAAGAAACCTAAGCAAAAGATTCATTTTTTAGAAAGTTTGAAACGGAGGAAATGTGAAGTTGGGAAATATAATTTCATGGAACAGCTTCTGGGGGCTGCACGCCTACTATCAGAGATGGTGGAGCCAATTTTTAAGGCAGCAACTGAGATATCTATCTTGCTTGCTCGAACATTTTTCACAGGGTTTTGCTTTATAATTTTGGCATTACTGGCACGTATTCGGGTGTTGGTTCAACAAATATTACTCGATGTTGTTTCAATATTCAACATGGTTGCGTCTATCTCCAAAAAAAAGCATGTAGTTACAATAAACCAGGAAGGAATTCAGGTCTTTAGAGAGTTTTACCCTACAAATGATGAATTTGTCCTCTTAGAGTGTGTTTGGAAAGAAGATAAATTTATATTGCAAGAAAACAAACAAGAAGTTGCGACTAACAATCAGGAAGAACATATTGGGCCAAATGTTTCTTCGACAGCATCAGCTGTGCGGTATCAGAGCCTTGAATCTTTTCTTGGAGATGATGAACTTGCTACCAAGCAGGCAGAGGCAAATCAAAGTAATGACGAAGCTCTTGATCTAATGAAAATGAATAAGAATGATTTGCTAGCAAGCCCTTCCAAAAGAGTTAACGATATTTCTGTCAAGGATATTACAGAAACAAAAGACAGTTCAATCAGTCCTGCAGCGACCTCGAGCCAGACATTCGTGCCTCGAGAAGGTAGTTCTCTTGTAAATTCAAGCCCCTCGTTGGTTGGTGCAAAAAAACTGCATTCGAAGAGGCCAGCATTTGTTTCAATTAAGCTTCCCAACCCGATTACAACTAGTGCAGTGGGAATTCAATTCAATGAAACCAAAGCTGATAGTGTGGAGAAGGAGGATCCATTTTTCGCTTTGCTCACCGGTGGGAAACGCAAAAGCAGTCTATTTTAGCAGTAGAGAGAATTCTAGTAAGTAGTCTTATTTTTTTTATTAGAAAGTGCATAAATGCATTTTGTTTATGAAATATCATCCAATAGTATTTATTCATAAAATTTGAGAGCAGTGCTGTAGAATCATGTATGATTATAGATAGATAGATAGATAGATAGGTAAAATCAAGTTTAATCCTTGGAGTTTAGGCTTAATTGATAATGTTCTTGTTTTCTGAACTTGTCTATGATGTTTATCAACATTCTCAGAGAAAATGAAAGCCAAAGATCATTACTAGTCATTCAAAAGACTCCAAAAAC ATGGCCTCTTCTGTAGCTGAGAACCGTCAGGAGAAGTTGGCATCCATGCTTGACCAGCTCTATTTAGAATGTGGCATTCTACATAAAATGATTTATAAGAACAAGAATCAGCATCGCCGGAGTTCCTATTTTCGATATCTTTTGCAGGTAAGGAGAGATTTAAGACTTCTACAAGCTGCCAAGTTAGAGGAGTTGGTAAATTCCTGCTTTCAAGTTATCGATGGAAAGAAACCTAAGCAAAAGATTCATTTTTTAGAAAGTTTGAAACGGAGGAAATGTGAAGTTGGGAAATATAATTTCATGGAACAGCTTCTGGGGGCTGCACGCCTACTATCAGAGATGGTGGAGCCAATTTTTAAGGCAGCAACTGAGATATCTATCTTGCTTGCTCGAACATTTTTCACAGGGTTTTGCTTTATAATTTTGGCATTACTGGCACGTATTCGGGTGTTGGTTCAACAAATATTACTCGATGTTGTTTCAATATTCAACATGGTTGCGTCTATCTCCAAAAAAAAGCATGTAGTTACAATAAACCAGGAAGGAATTCAGGTCTTTAGAGAGTTTTACCCTACAAATGATGAATTTGTCCTCTTAGAGTGTGTTTGGAAAGAAGATAAATTTATATTGCAAGAAAACAAACAAGAAGTTGCGACTAACAATCAGGAAGAACATATTGGGCCAAATGTTTCTTCGACAGCATCAGCTGTGCGGTATCAGAGCCTTGAATCTTTTCTTGGAGATGATGAACTTGCTACCAAGCAGGCAGAGGCAAATCAAAGTAATGACGAAGCTCTTGATCTAATGAAAATGAATAAGAATGATTTGCTAGCAAGCCCTTCCAAAAGAGTTAACGATATTTCTGTCAAGGATATTACAGAAACAAAAGACAGTTCAATCAGTCCTGCAGCGACCTCGAGCCAGACATTCGTGCCTCGAGAAGGTAGTTCTCTTGTAAATTCAAGCCCCTCGTTGGTTGGTGCAAAAAAACTGCATTCGAAGAGGCCAGCATTTGTTTCAATTAAGCTTCCCAACCCGATTACAACTAGTGCAGTGGGAATTCAATTCAATGAAACCAAAGCTGATAGTGTGGAGAAGGAGGATCCATTTTTCGCTTTGCTCACCGGTGGGAAACGCAAAAGCAGTCTATTTTAG MASSVAENRQEKLASMLDQLYLECGILHKMIYKNKNQHRRSSYFRYLLQVRRDLRLLQAAKLEELVNSCFQVIDGKKPKQKIHFLESLKRRKCEVGKYNFMEQLLGAARLLSEMVEPIFKAATEISILLARTFFTGFCFIILALLARIRVLVQQILLDVVSIFNMVASISKKKHVVTINQEGIQVFREFYPTNDEFVLLECVWKEDKFILQENKQEVATNNQEEHIGPNVSSTASAVRYQSLESFLGDDELATKQAEANQSNDEALDLMKMNKNDLLASPSKRVNDISVKDITETKDSSISPAATSSQTFVPREGSSLVNSSPSLVGAKKLHSKRPAFVSIKLPNPITTSAVGIQFNETKADSVEKEDPFFALLTGGKRKSSLF
BLAST of Carg24816 vs. NCBI nr
Match: XP_023520444.1 (uncharacterized protein LOC111783829 [Cucurbita pepo subsp. pepo] >XP_023520445.1 uncharacterized protein LOC111783829 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 708.0 bits (1826), Expect = 1.8e-200 Identity = 378/384 (98.44%), Postives = 380/384 (98.96%), Query Frame = 0
BLAST of Carg24816 vs. NCBI nr
Match: XP_022932178.1 (uncharacterized protein LOC111438493 [Cucurbita moschata] >XP_022932179.1 uncharacterized protein LOC111438493 [Cucurbita moschata]) HSP 1 Score: 700.7 bits (1807), Expect = 2.8e-198 Identity = 374/384 (97.40%), Postives = 379/384 (98.70%), Query Frame = 0
BLAST of Carg24816 vs. NCBI nr
Match: XP_022985227.1 (uncharacterized protein LOC111483286 [Cucurbita maxima] >XP_022985228.1 uncharacterized protein LOC111483286 [Cucurbita maxima] >XP_022985229.1 uncharacterized protein LOC111483286 [Cucurbita maxima]) HSP 1 Score: 663.3 bits (1710), Expect = 5.0e-187 Identity = 358/384 (93.23%), Postives = 369/384 (96.09%), Query Frame = 0
BLAST of Carg24816 vs. NCBI nr
Match: XP_022151030.1 (uncharacterized protein LOC111019049 [Momordica charantia] >XP_022151031.1 uncharacterized protein LOC111019049 [Momordica charantia]) HSP 1 Score: 553.9 bits (1426), Expect = 4.3e-154 Identity = 302/384 (78.65%), Postives = 334/384 (86.98%), Query Frame = 0
BLAST of Carg24816 vs. NCBI nr
Match: XP_004140752.1 (PREDICTED: uncharacterized protein LOC101210672 [Cucumis sativus] >XP_011651188.1 PREDICTED: uncharacterized protein LOC101210672 [Cucumis sativus]) HSP 1 Score: 542.3 bits (1396), Expect = 1.3e-150 Identity = 294/390 (75.38%), Postives = 323/390 (82.82%), Query Frame = 0
BLAST of Carg24816 vs. TAIR10
Match: AT1G50910.1 (unknown protein) HSP 1 Score: 242.3 bits (617), Expect = 5.0e-64 Identity = 151/333 (45.35%), Postives = 209/333 (62.76%), Query Frame = 0
BLAST of Carg24816 vs. TrEMBL
Match: tr|A0A1S3CQT2|A0A1S3CQT2_CUCME (uncharacterized protein LOC103503723 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503723 PE=4 SV=1) HSP 1 Score: 507.3 bits (1305), Expect = 3.0e-140 Identity = 277/357 (77.59%), Postives = 310/357 (86.83%), Query Frame = 0
BLAST of Carg24816 vs. TrEMBL
Match: tr|A0A0A0LBJ0|A0A0A0LBJ0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G183980 PE=4 SV=1) HSP 1 Score: 402.1 bits (1032), Expect = 1.4e-108 Identity = 219/305 (71.80%), Postives = 246/305 (80.66%), Query Frame = 0
BLAST of Carg24816 vs. TrEMBL
Match: tr|A0A1S3CQU1|A0A1S3CQU1_CUCME (uncharacterized protein LOC103503723 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503723 PE=4 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 4.7e-101 Identity = 211/286 (73.78%), Postives = 242/286 (84.62%), Query Frame = 0
BLAST of Carg24816 vs. TrEMBL
Match: tr|A0A2H5PIP8|A0A2H5PIP8_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_140320 PE=4 SV=1) HSP 1 Score: 367.9 bits (943), Expect = 2.9e-98 Identity = 213/381 (55.91%), Postives = 272/381 (71.39%), Query Frame = 0
BLAST of Carg24816 vs. TrEMBL
Match: tr|V4UH74|V4UH74_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10008629mg PE=4 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 4.1e-97 Identity = 212/382 (55.50%), Postives = 274/382 (71.73%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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