Carg24780 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGAGACCGTTTATTCTCTTTCTACACTTAAAAAACTCTCTATAAACTTATCACACAGGTAGAAACTTATACAGATATCCATCTACTTTTGTGTCTTTATAACTTAAACGCAATTTTTTTTTTGTGTATTATAATTTTTTATGTAATGTTTTTATTTCTATATTACCTTGCATCATTATCTAATGTAGTTTTCAATGCTTTAATAGTGTTTGAGCCGTCCTCATGGAGTTGTATACATGGCTGGAAAGAAACATTACTTTGGAGTAGGAGGAGGAACCCGACGCTTTCTCTCTGTGTTAGAAAAAGAAGGTAAGCTGGTCGTACACAATTTCGATAAAATTATGCTTAAACATTATACTTCTTCCTGATTGGACAAATGAGAACTAATTTAAAATGAATTTGATATTCTTGTGGGGTCTTCCATTGGAGACTCTTCTATGAATTCGTTATACACATTGCTAGCCTAAAATATCATGAGTGATGAATTTCTTCTGGGTCATTGGCTGATTTAAGACGAATGATTCCTTTTTTTTAATTCTTTTTTCTTTCTAATTTTAACTTTTTTATGAAGCAGTGAATCATTTCATTGATATGATAAAATTTACAAAAAAAAAAAAAGAAAAAGAAAAAAAGAAAAAGAAAAAAGGAAACTTGTGAGACCCAACATAGGTTGGAGTCTTTATAAGGGTGTGGAAACCTCTCTCTAATAGACGCGTTTTAAAATCCGTGAGGTTGACGGTGATACGTAATGTGCCAAAGCAGGCAATATTGGCTAGCGGTGGGTTTTAACTGTTACAAGATCGTACCCAATGAATTACAAGAAGAGGATTTGAATCGCACCCAATTAGAGTTAAGAAAGGTTTGAATGTGTTTCCACGTTTGTGAAGATAAGAGGAATCACTATCTGACTTATTCTGTGATTATATGGTTTGAGAACTAAAATTATATGTTTGTTTCCCTACAAAGTTTCCATTAATTTCAGATGGGTTTATGATTCAATCACTTTTTGAAGGGAATTATTTGTTTAATTGACTGTTTATCTTATGTGCCCTTACAGGTGAAATGGTTTCCAAACTGATTGCAGAAGTTGCTGATGGTTCGTCTAACGTTAGAGAAGTGTGGAAGATCTCATTGAAATAGGTTATAAATCCTAATCTTTCACTGAAAAGTTTTCTTTCGTTACTGGTACATGCCTGCATCAAAGTAATTCTTGTTCATGTTTTGGGATTTTTTATCTGGCACCTTTCTTCTACAAAACTTCTCAAATGATCAAAATATCTTCAATTTTGTTTTCTCTCTTTTTTAGGCAAAGATAAATTAAATTAATATAACCCAATTATAATCCTTGCACAAGGAAGCATTAGGGATGGTTTATGCAAATGATCACTGGAACGATAGCGTTCTGTATTTCTCTCCTTTGTCGAGTTCGTATCTGAAAATTATGGATCAAATCTTTTTTGTGAAGTTGAACACTGTGTTGTGTGCTCCCTTTGTTGGAAAGTATGTCATAGTTTCTTCAAGAATATTACATGCTCTAACTGTGATGAGTGGATGGATATGTCTTAGCAAAATCCTGGAAAAGAACTAAATGGATCCTTAGGTACTTACAATACTTCATGAGCATTCCTTGTATCTGATGAAAATATTTATGTATGAATTTTGCAGTTGACATGGTCAAAGAAGATCATCAATAGGTATGCGTTGAAGCTATGAACTATTATTGGCGCCCCAAATTCAGCTTATTATAGCCCATCAACACGAAAAGCAGCTGAGCACATAGAATTGGAACCTAGGGACTGCCTACTTAAGCTATGCTCAATTGGTATTTAAGGGATCATCCATGATTCGAGTTTGATTCGACGTTTTGTTAGAACATGATTAGAGGTTTGAATTTCTATCCCTGCACGTTTGAACTTGAAAAGAAAAAAAAAAAAGTTGAAGAGAGTAAAATGACACAAACTCGTGAGATCGGACATTGAACGGACTTTGAACTTCTAACTTTTGATTGATGATACAATATATTTTGAGTTGGTGATAGCCATATTAATTATGGGATGAAAAGTTCCAGAGAATCAATAGAGATCGAAGGACACTATATCGAAAAGTTTTTAGCGTAGTGTGGATGTAAGTTGAAAATATCGAACTATATAACAGGCGTTCTTTCATATCTTTTCTCATTTTCAGTAGGGGTGTGCATTCAACCCGACAACTC ATGGCGGAGACCGTTTATTCTCTTTCTACACTTAAAAAACTCTCTATAAACTTATCACACAGCCGTCCTCATGGAGTTGTATACATGGCTGGAAAGAAACATTACTTTGGAGTAGGAGGAGGAACCCGACGCTTTCTCTCTGTGTTAGAAAAAGAAGGTGAAATGGTTTCCAAACTGATTGCAGAAGTTGCTGATGGTTCGTCTAACTTGACATGGTCAAAGAAGATCATCAATAGGTATGCGTTGAAGCTATGAACTATTATTGGCGCCCCAAATTCAGCTTATTATAGCCCATCAACACGAAAAGCAGCTGAGCACATAGAATTGGAACCTAGGGACTGCCTACTTAAGCTATGCTCAATTGGTATTTAAGGGATCATCCATGATTCGAGTTTGATTCGACGTTTTGTTAGAACATGATTAGAGGTTTGAATTTCTATCCCTGCACGTTTGAACTTGAAAAGAAAAAAAAAAAAGTTGAAGAGAGTAAAATGACACAAACTCGTGAGATCGGACATTGAACGGACTTTGAACTTCTAACTTTTGATTGATGATACAATATATTTTGAGTTGGTGATAGCCATATTAATTATGGGATGAAAAGTTCCAGAGAATCAATAGAGATCGAAGGACACTATATCGAAAAGTTTTTAGCGTAGTGTGGATGTAAGTTGAAAATATCGAACTATATAACAGGCGTTCTTTCATATCTTTTCTCATTTTCAGTAGGGGTGTGCATTCAACCCGACAACTC ATGGCGGAGACCGTTTATTCTCTTTCTACACTTAAAAAACTCTCTATAAACTTATCACACAGCCGTCCTCATGGAGTTGTATACATGGCTGGAAAGAAACATTACTTTGGAGTAGGAGGAGGAACCCGACGCTTTCTCTCTGTGTTAGAAAAAGAAGGTGAAATGGTTTCCAAACTGATTGCAGAAGTTGCTGATGGTTCGTCTAACTTGACATGGTCAAAGAAGATCATCAATAGGTATGCGTTGAAGCTATGA MAETVYSLSTLKKLSINLSHSRPHGVVYMAGKKHYFGVGGGTRRFLSVLEKEGEMVSKLIAEVADGSSNLTWSKKIINRYALKL
BLAST of Carg24780 vs. NCBI nr
Match: XP_022956194.1 (histidine protein methyltransferase 1 homolog [Cucurbita moschata] >XP_022956195.1 histidine protein methyltransferase 1 homolog [Cucurbita moschata]) HSP 1 Score: 117.9 bits (294), Expect = 1.7e-23 Identity = 63/72 (87.50%), Postives = 64/72 (88.89%), Query Frame = 0
BLAST of Carg24780 vs. NCBI nr
Match: XP_022979862.1 (histidine protein methyltransferase 1 homolog [Cucurbita maxima] >XP_022979863.1 histidine protein methyltransferase 1 homolog [Cucurbita maxima] >XP_022979864.1 histidine protein methyltransferase 1 homolog [Cucurbita maxima]) HSP 1 Score: 117.9 bits (294), Expect = 1.7e-23 Identity = 63/72 (87.50%), Postives = 64/72 (88.89%), Query Frame = 0
BLAST of Carg24780 vs. NCBI nr
Match: XP_023528866.1 (histidine protein methyltransferase 1 homolog [Cucurbita pepo subsp. pepo] >XP_023528867.1 histidine protein methyltransferase 1 homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 117.9 bits (294), Expect = 1.7e-23 Identity = 63/72 (87.50%), Postives = 64/72 (88.89%), Query Frame = 0
BLAST of Carg24780 vs. NCBI nr
Match: XP_022138235.1 (histidine protein methyltransferase 1 homolog [Momordica charantia] >XP_022138236.1 histidine protein methyltransferase 1 homolog [Momordica charantia]) HSP 1 Score: 116.7 bits (291), Expect = 3.8e-23 Identity = 62/72 (86.11%), Postives = 64/72 (88.89%), Query Frame = 0
BLAST of Carg24780 vs. NCBI nr
Match: XP_008439038.1 (PREDICTED: histidine protein methyltransferase 1 homolog [Cucumis melo]) HSP 1 Score: 115.2 bits (287), Expect = 1.1e-22 Identity = 61/72 (84.72%), Postives = 63/72 (87.50%), Query Frame = 0
BLAST of Carg24780 vs. TAIR10
Match: AT4G14000.1 (Putative methyltransferase family protein) HSP 1 Score: 80.9 bits (198), Expect = 4.2e-16 Identity = 40/72 (55.56%), Postives = 53/72 (73.61%), Query Frame = 0
BLAST of Carg24780 vs. TAIR10
Match: AT2G43320.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 43.9 bits (102), Expect = 5.7e-05 Identity = 23/67 (34.33%), Postives = 38/67 (56.72%), Query Frame = 0
BLAST of Carg24780 vs. Swiss-Prot
Match: sp|Q55DL2|MET18_DICDI (Histidine protein methyltransferase 1 homolog OS=Dictyostelium discoideum OX=44689 GN=DDB_G0270580 PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 4.5e-07 Identity = 27/79 (34.18%), Postives = 49/79 (62.03%), Query Frame = 0
BLAST of Carg24780 vs. TrEMBL
Match: tr|A0A1S3AYF7|A0A1S3AYF7_CUCME (histidine protein methyltransferase 1 homolog OS=Cucumis melo OX=3656 GN=LOC103483944 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 7.3e-23 Identity = 61/72 (84.72%), Postives = 63/72 (87.50%), Query Frame = 0
BLAST of Carg24780 vs. TrEMBL
Match: tr|A0A0A0LAX3|A0A0A0LAX3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G171830 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 1.6e-22 Identity = 60/72 (83.33%), Postives = 63/72 (87.50%), Query Frame = 0
BLAST of Carg24780 vs. TrEMBL
Match: tr|A0A2P4N285|A0A2P4N285_QUESU (Histidine protein methyltransferase 1 like OS=Quercus suber OX=58331 GN=CFP56_23707 PE=4 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 2.9e-19 Identity = 52/72 (72.22%), Postives = 60/72 (83.33%), Query Frame = 0
BLAST of Carg24780 vs. TrEMBL
Match: tr|A0A2P6SBI1|A0A2P6SBI1_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0331221 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 8.4e-19 Identity = 51/72 (70.83%), Postives = 61/72 (84.72%), Query Frame = 0
BLAST of Carg24780 vs. TrEMBL
Match: tr|A0A2P6QW11|A0A2P6QW11_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0413351 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 8.4e-19 Identity = 51/72 (70.83%), Postives = 61/72 (84.72%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |