Carg24760 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24760
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	transcription factor FAMA
Location	Cucurbita_argyrosperma_scaffold_305 : 54133 .. 56035 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGCCAAGCTTCTCCAGCCACCACCACCACCACCAACACGATCTCTACAACAACCAAGACCAATTCATGAGGTCACGACCCTTCGAAACCTCCGCCGACAACGCCACCGGAATCCTCACCTACTTTCCGGCCAACCCTCTACCTCCTCCGCCGCTGCAATCCGTAACTTCACCGGACAAGCTCAGCTTTGCTGAGGTTATGCAGTTCGCCGACTTTGGTCCGAAGCTCAGCCTCAACCGGTTCGACGAGGATGACGAACCAGCCGGGATTGACCCAGTCTACTTCTTGAAGTTCCCGGTTCTGAATAACGAGAGGGCGGAGGAGGCGGCGGCCGGAGAGGAGGAAGCGGCGGAGATGGGAGGCAGAATTGTAGGGGAGTTAGAAGAAGAGGAGAATTTTAGGAACAATAAAAATGGTAATAATAATAATAATAATAATAATGGTAATAGTAATAAAAGGAAAAGAGGAAGGACGGTGAAGACAAGCGAAGAGGTGGAGAGCCAAAGAATGACGCATATTGCGGTGGAGAGAAATCGAAGGAAGCAGATGAATGAACATCTCCGCGTTTTGCGCTCTCTCATGCCTGGTTCGTACGTTCAAAGGGTACGTTTTTTCTCTCTTTTTTCTAATTTCACGGCGGAGAGATTATAATAGAGATGGCGGAGAGATTGTAATAGAGATGGGCGGAGAGATTGTAATAGAGATGGGCGGAGAGATTGTAATAGAGATGGGCGGAGAGATTGTAATAGAGATGGCGGAGAGATTTTCTGGACATGGGAGAGTTTTATTTTTATTTTTATTTTTTGATAAAATATTATTAGATTTATTAGAATATTTTATAGTTTAAATATAAATTAAATATACACGCTGCAGGGAGATCAAGCCTCCATAATCGGCGGAGCGATCGAGTTCGTGAGGGAGCTGGAGCAGCTTCTCCAGTGTCTAGAATCGCAAAAACGACGTCGTCTTCTAGGAGAGCCACCACTGCAGGCAGGCGACACACCTCCGCCGCAGCAACCGCCATTTCTGCCGCCGGGAGCAGGGAATTTCGGTGGTCATCAAAACGAGGGGCAAATATTGGAAACCACGGCGGAGAGCAAATCGTGCTTAGCTGACGTGGAAGTGAAGGTTTTAGGGTTCGACGCAATGATAAAGATCCTGTCGAGAAGACGACCGGGACAGCTGATTAAAGCCATCGCCGCCCTCGAAGATCTTCAGCTCAATATTCTTCATACAAATATTACCACCATTGAACAGACTGTTCTTTATTCCTTCAACGTCAAGGTTAGTCAATTTTTATTTTTATTTTTATTTTTATTTTTTAAAATTCATTTCAGAACTTTTAATTTGGGATTTTTTTATTAAGAATAATATATTCCAGTTGATTCATTATTAATAATAATTAAGCTCGGTTCAATAATTATTTAATTTTTAAAAATTAAAAATAATACTTTAACCTATAAAAATTATTTGTGTTATTATCCACTTTCTATTAAAAAAAAAAAAGTTTTTCTTCATGTGGAATTAATTTCTTTACTAGTATTTTCGCATTTCTTAGATAAAATTTTAAATTTTTAATCAATTTCCAAAAACAAATGGTAAAAATAAAATAATTTATTGCAATTAGAATAATAGGGTGAATTTTATAATTATTATTGGATTTATTTTGAGTATGATTGGCAGATAGCAAGCGAGTCAAGATTCACAGCAGAGGATATAGCGAGCTCGGTTCAGCAGATATTCGGTTTTATTCATGCGAACACCGGCATGTGATGCAATAAATTAAACCCATAAATATCTCATCAAAATATTTGTATCATTAATTATTTATTTTTCTGCTCTTTCTCCTCTTGTTTTATTGTTTTAAACAAAATAAAAAATATATAATTTATATTTCTCC

mRNA sequence

ATGCCGCCAAGCTTCTCCAGCCACCACCACCACCACCAACACGATCTCTACAACAACCAAGACCAATTCATGAGGTCACGACCCTTCGAAACCTCCGCCGACAACGCCACCGGAATCCTCACCTACTTTCCGGCCAACCCTCTACCTCCTCCGCCGCTGCAATCCGTAACTTCACCGGACAAGCTCAGCTTTGCTGAGGTTATGCAGTTCGCCGACTTTGGTCCGAAGCTCAGCCTCAACCGGTTCGACGAGGATGACGAACCAGCCGGGATTGACCCAGTCTACTTCTTGAAGTTCCCGGTTCTGAATAACGAGAGGGCGGAGGAGGCGGCGGCCGGAGAGGAGGAAGCGGCGGAGATGGGAGGCAGAATTGTAGGGGAGTTAGAAGAAGAGGAGAATTTTAGGAACAATAAAAATGGTAATAATAATAATAATAATAATAATGGTAATAGTAATAAAAGGAAAAGAGGAAGGACGGTGAAGACAAGCGAAGAGGTGGAGAGCCAAAGAATGACGCATATTGCGGTGGAGAGAAATCGAAGGAAGCAGATGAATGAACATCTCCGCGTTTTGCGCTCTCTCATGCCTGGTTCGTACGTTCAAAGGGGAGATCAAGCCTCCATAATCGGCGGAGCGATCGAGTTCGTGAGGGAGCTGGAGCAGCTTCTCCAGTGTCTAGAATCGCAAAAACGACGTCGTCTTCTAGGAGAGCCACCACTGCAGGCAGGCGACACACCTCCGCCGCAGCAACCGCCATTTCTGCCGCCGGGAGCAGGGAATTTCGGTGGTCATCAAAACGAGGGGCAAATATTGGAAACCACGGCGGAGAGCAAATCGTGCTTAGCTGACGTGGAAGTGAAGGTTTTAGGGTTCGACGCAATGATAAAGATCCTGTCGAGAAGACGACCGGGACAGCTGATTAAAGCCATCGCCGCCCTCGAAGATCTTCAGCTCAATATTCTTCATACAAATATTACCACCATTGAACAGACTGTTCTTTATTCCTTCAACGTCAAGATAGCAAGCGAGTCAAGATTCACAGCAGAGGATATAGCGAGCTCGGTTCAGCAGATATTCGGTTTTATTCATGCGAACACCGGCATGTGATGCAATAAATTAAACCCATAAATATCTCATCAAAATATTTGTATCATTAATTATTTATTTTTCTGCTCTTTCTCCTCTTGTTTTATTGTTTTAAACAAAATAAAAAATATATAATTTATATTTCTCC

Coding sequence (CDS)

ATGCCGCCAAGCTTCTCCAGCCACCACCACCACCACCAACACGATCTCTACAACAACCAAGACCAATTCATGAGGTCACGACCCTTCGAAACCTCCGCCGACAACGCCACCGGAATCCTCACCTACTTTCCGGCCAACCCTCTACCTCCTCCGCCGCTGCAATCCGTAACTTCACCGGACAAGCTCAGCTTTGCTGAGGTTATGCAGTTCGCCGACTTTGGTCCGAAGCTCAGCCTCAACCGGTTCGACGAGGATGACGAACCAGCCGGGATTGACCCAGTCTACTTCTTGAAGTTCCCGGTTCTGAATAACGAGAGGGCGGAGGAGGCGGCGGCCGGAGAGGAGGAAGCGGCGGAGATGGGAGGCAGAATTGTAGGGGAGTTAGAAGAAGAGGAGAATTTTAGGAACAATAAAAATGGTAATAATAATAATAATAATAATAATGGTAATAGTAATAAAAGGAAAAGAGGAAGGACGGTGAAGACAAGCGAAGAGGTGGAGAGCCAAAGAATGACGCATATTGCGGTGGAGAGAAATCGAAGGAAGCAGATGAATGAACATCTCCGCGTTTTGCGCTCTCTCATGCCTGGTTCGTACGTTCAAAGGGGAGATCAAGCCTCCATAATCGGCGGAGCGATCGAGTTCGTGAGGGAGCTGGAGCAGCTTCTCCAGTGTCTAGAATCGCAAAAACGACGTCGTCTTCTAGGAGAGCCACCACTGCAGGCAGGCGACACACCTCCGCCGCAGCAACCGCCATTTCTGCCGCCGGGAGCAGGGAATTTCGGTGGTCATCAAAACGAGGGGCAAATATTGGAAACCACGGCGGAGAGCAAATCGTGCTTAGCTGACGTGGAAGTGAAGGTTTTAGGGTTCGACGCAATGATAAAGATCCTGTCGAGAAGACGACCGGGACAGCTGATTAAAGCCATCGCCGCCCTCGAAGATCTTCAGCTCAATATTCTTCATACAAATATTACCACCATTGAACAGACTGTTCTTTATTCCTTCAACGTCAAGATAGCAAGCGAGTCAAGATTCACAGCAGAGGATATAGCGAGCTCGGTTCAGCAGATATTCGGTTTTATTCATGCGAACACCGGCATGTGA

Protein sequence

MPPSFSSHHHHHQHDLYNNQDQFMRSRPFETSADNATGILTYFPANPLPPPPLQSVTSPDKLSFAEVMQFADFGPKLSLNRFDEDDEPAGIDPVYFLKFPVLNNERAEEAAAGEEEAAEMGGRIVGELEEEENFRNNKNGNNNNNNNNGNSNKRKRGRTVKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGEPPLQAGDTPPPQQPPFLPPGAGNFGGHQNEGQILETTAESKSCLADVEVKVLGFDAMIKILSRRRPGQLIKAIAALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIASSVQQIFGFIHANTGM

Homology

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BLAST of Carg24760 vs. NCBI nr
Match: XP_022924298.1 (transcription factor FAMA [Cucurbita moschata] >XP_022924299.1 transcription factor FAMA [Cucurbita moschata])

HSP 1 Score: 580.9 bits (1496), Expect = 3.1e-162
Identity = 363/370 (98.11%), Postives = 363/370 (98.11%), Query Frame = 0


Query: 1   MPPSFXXXXXXXXXXLYNNQDQFMRSRPFETSADNATGILTYFPANPLPPPPLQSVTSPD 60
           MPPSF  XXXXXX  LYNNQDQFMRSRPFETSADNATGILTYFPANPLPPPPLQSVTSPD
Sbjct: 13  MPPSF-SXXXXXXHDLYNNQDQFMRSRPFETSADNATGILTYFPANPLPPPPLQSVTSPD 72

Query: 61  KLSFAEVMQFADFGPKLSLNRFDEDDEPAGIDPVYFLKFPVLNNERAEEXXXXXXXXXEM 120
           KLSFAEVMQFADFGPKLSLNRFDEDDEPAGIDPVYFLKFPVLNNERAEE XXXXXXXXEM
Sbjct: 73  KLSFAEVMQFADFGPKLSLNRFDEDDEPAGIDPVYFLKFPVLNNERAEEAXXXXXXXXEM 132

Query: 121 GGRIVGEL--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTSEEVESQRMTHIAVER 180
           GGRIVGEL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTSEEVESQRMTHIAVER
Sbjct: 133 GGRIVGELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTSEEVESQRMTHIAVER 192

Query: 181 NRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGEP 240
           NRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGEP
Sbjct: 193 NRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGEP 252

Query: 241 PLQAGDTXXXXXXXFLPPGAGNFGGHQNEGQILETTAESKSCLADVEVKVLGFDAMIKIL 300
           PLQAGDTXXXXXXXFLPPGAGNFGGHQNEGQILETTAESKSCLADVEVKVLGFDAMIKIL
Sbjct: 253 PLQAGDTXXXXXXXFLPPGAGNFGGHQNEGQILETTAESKSCLADVEVKVLGFDAMIKIL 312

Query: 301 SRRRPGQLIKAIAALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIASSVQQI 360
           SRRRPGQLIKAIAALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIASSVQQI
Sbjct: 313 SRRRPGQLIKAIAALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIASSVQQI 372

Query: 361 FGFIHANTGM 369
           FGFIHANTGM
Sbjct: 373 FGFIHANTGM 381

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BLAST of Carg24760 vs. NCBI nr
Match: XP_023526629.1 (transcription factor FAMA [Cucurbita pepo subsp. pepo] >XP_023526630.1 transcription factor FAMA [Cucurbita pepo subsp. pepo])

HSP 1 Score: 576.2 bits (1484), Expect = 7.7e-161
Identity = 356/374 (95.19%), Postives = 356/374 (95.19%), Query Frame = 0


Query: 1   MPPSFXXXXXXXXXXLYNNQDQFMRSRPFETSADNATGILTYFPANPLPPPPLQSVTSPD 60
           MPPSF  XXXXXX  LYNNQDQFMRSRPFETSADNATGILTYFPANPLPPPPLQSVTSPD
Sbjct: 13  MPPSF-SXXXXXXHDLYNNQDQFMRSRPFETSADNATGILTYFPANPLPPPPLQSVTSPD 72

Query: 61  KLSFAEVMQFADFGPKLSLNRFDEDDEPAGIDPVYFLKFPVLNNERAEEXXXXXXXXXEM 120
           KLSFAEVMQFADFGPKLSLNRFDEDDEPAGIDPVYFLKFPVLNNERAEEXXXXXXXXXEM
Sbjct: 73  KLSFAEVMQFADFGPKLSLNRFDEDDEPAGIDPVYFLKFPVLNNERAEEXXXXXXXXXEM 132

Query: 121 GGRIVGEL------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTSEEVESQRMTHI 180
           GGRIVGEL      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTSEEVESQRMTHI
Sbjct: 133 GGRIVGELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTSEEVESQRMTHI 192

Query: 181 AVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRL 240
           AVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRL
Sbjct: 193 AVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRL 252

Query: 241 LGEPPLQAGDTXXXXXXXFLPPGAGNFGGHQNEGQILETTAESKSCLADVEVKVLGFDAM 300
           LGE PLQAGDT       FLPPGAGNFGGHQNEGQILETTAESKSCLADVEVKVLGFDAM
Sbjct: 253 LGESPLQAGDTPPPQQPPFLPPGAGNFGGHQNEGQILETTAESKSCLADVEVKVLGFDAM 312

Query: 301 IKILSRRRPGQLIKAIAALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIASS 360
           IKILSRRRPGQLIKAIAALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIASS
Sbjct: 313 IKILSRRRPGQLIKAIAALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIASS 372

Query: 361 VQQIFGFIHANTGM 369
           VQQIFGFIHANTGM
Sbjct: 373 VQQIFGFIHANTGM 385

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BLAST of Carg24760 vs. NCBI nr
Match: XP_022980321.1 (transcription factor FAMA [Cucurbita maxima] >XP_022980322.1 transcription factor FAMA [Cucurbita maxima])

HSP 1 Score: 566.2 bits (1458), Expect = 8.0e-158
Identity = 339/354 (95.76%), Postives = 339/354 (95.76%), Query Frame = 0


Query: 19  NQDQFMRSRPFETSADNATGILTYFPANPLPPPPLQSVTSPDKLSFAEVMQFADFGPKLS 78
           NQDQFMRSRPFETSADNATGILTYFPANPLPPPPLQSVTSPDKLSFAEVMQFADFGPKLS
Sbjct: 30  NQDQFMRSRPFETSADNATGILTYFPANPLPPPPLQSVTSPDKLSFAEVMQFADFGPKLS 89

Query: 79  LNRFDEDDEPAGIDPVYFLKFPVLNNERAEEXXXXXXXXXEMGGRIVGEL----XXXXXX 138
           LNRFDEDDEPAGIDPVYFLKFPVLNNERAEE         EMGGRIVGEL    XXXXXX
Sbjct: 90  LNRFDEDDEPAGIDPVYFLKFPVLNNERAEEAAAGEEEAAEMGGRIVGELEEXXXXXXXX 149

Query: 139 XXXXXXXXXXXXXXXXXXXXXXXXXVKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSL 198
           XXXXXXXXXXXXXXXXXXXXXXXXX KTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSL
Sbjct: 150 XXXXXXXXXXXXXXXXXXXXXXXXXXKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSL 209

Query: 199 MPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGEPPLQAGDTXXXXXXXFL 258
           MPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGEPPLQAGDTXXXXXXXFL
Sbjct: 210 MPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGEPPLQAGDTXXXXXXXFL 269

Query: 259 PPGAGNFGGHQNEGQILETTAESKSCLADVEVKVLGFDAMIKILSRRRPGQLIKAIAALE 318
           PPGAGNFGGHQNEGQILETTAESKSCLADVEVKVLGFDAMIKILSRRRPGQLIKAIAALE
Sbjct: 270 PPGAGNFGGHQNEGQILETTAESKSCLADVEVKVLGFDAMIKILSRRRPGQLIKAIAALE 329

Query: 319 DLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIASSVQQIFGFIHANTGM 369
           DL LNILHTNITTIEQTVLYSFNVKIASESRFTAEDIASSVQQIFGFIHANTGM
Sbjct: 330 DLHLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIASSVQQIFGFIHANTGM 383

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BLAST of Carg24760 vs. NCBI nr
Match: XP_016898993.1 (PREDICTED: transcription factor FAMA [Cucumis melo])

HSP 1 Score: 504.6 bits (1298), Expect = 2.8e-139
Identity = 308/358 (86.03%), Postives = 317/358 (88.55%), Query Frame = 0


Query: 16  LYNNQDQFMRSRP-FETSADNATGILTYFPANPLPPPPLQSVTSPDKLSFAEVMQFADFG 75
           LYNNQDQFMRSRP FETSADN+TGILTYFPANP        +TSPDKLSF EVMQFADFG
Sbjct: 29  LYNNQDQFMRSRPNFETSADNSTGILTYFPANP--------ITSPDKLSFGEVMQFADFG 88

Query: 76  PKLSLNRFDEDDEPAGIDPVYFLKFPVLNNERAEE---XXXXXXXXXEMGGRIVGELXXX 135
           PKLSLNRFD+D EP GIDPVYFLKFPVLNNER EE            E+GGR +  +   
Sbjct: 89  PKLSLNRFDDDSEPPGIDPVYFLKFPVLNNERVEETATTGGETEEAAEIGGRSLNIVGEV 148

Query: 136 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTSEEVESQRMTHIAVERNRRKQMNEHLRVL 195
            XXXXXXXXXXXXXXXXXXXXXXXXXXX KTSEEVESQRMTHIAVERNRRKQMNEHLRVL
Sbjct: 149 EXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSEEVESQRMTHIAVERNRRKQMNEHLRVL 208

Query: 196 RSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGEPPL-QAGDTXXXXX 255
           RSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGE P+ QA DT XXXX
Sbjct: 209 RSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGESPIVQAADTPXXXX 268

Query: 256 XXFLPPGAGNFGGHQNEGQILETTAESKSCLADVEVKVLGFDAMIKILSRRRPGQLIKAI 315
           XXFLPPGA NF GHQN+GQI ETTAESKSCLADVEVKV+GFDAMIKILSRRRPGQLIKAI
Sbjct: 269 XXFLPPGASNFAGHQNDGQIFETTAESKSCLADVEVKVIGFDAMIKILSRRRPGQLIKAI 328

Query: 316 AALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIASSVQQIFGFIHANTGM 369
           AALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIASSVQQIF FIHANTGM
Sbjct: 329 AALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIASSVQQIFNFIHANTGM 378

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BLAST of Carg24760 vs. NCBI nr
Match: XP_004133999.2 (PREDICTED: transcription factor FAMA [Cucumis sativus] >XP_011650878.1 PREDICTED: transcription factor FAMA [Cucumis sativus] >KGN56741.1 hypothetical protein Csa_3G131940 [Cucumis sativus])

HSP 1 Score: 467.2 bits (1201), Expect = 5.0e-128
Identity = 304/361 (84.21%), Postives = 312/361 (86.43%), Query Frame = 0


Query: 16  LYNNQDQFMRSRP-FETSADNATGILTYFPANPLPPPPLQSVTSPDKLSFAEVMQFADFG 75
           LYNNQDQFMRSRP FETSADN+TGILTYFP NP        +TSPDKLSF EVMQFADFG
Sbjct: 29  LYNNQDQFMRSRPNFETSADNSTGILTYFPPNP--------ITSPDKLSFGEVMQFADFG 88

Query: 76  PKLSLNRFDEDD-EPAGIDPVYFLKFPVLNNERAEE--XXXXXXXXXEMGGR--IVGEL- 135
           PKLSLNRFD+DD EP GIDPVYFLKFPVLNNER E+           E+GGR  +VGEL 
Sbjct: 89  PKLSLNRFDDDDSEPPGIDPVYFLKFPVLNNERVEDTAGGGETEEAAEIGGRSLVVGELX 148

Query: 136 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTSEEVESQRMTHIAVERNRRKQMNEHL 195
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTSEEVESQRMTHIAVERNRRKQMNEHL
Sbjct: 149 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTSEEVESQRMTHIAVERNRRKQMNEHL 208

Query: 196 RVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQK-RRRLLGEPPLQAGDTXX 255
           RVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQK                XX
Sbjct: 209 RVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKXXXXXXXXXXXXXXXXXX 268

Query: 256 XXXXXFLPPGAGNFGGHQNEGQILETTAESKSCLADVEVKVLGFDAMIKILSRRRPGQLI 315
           XXXXXFLPPGA NF GHQN+ QI ETTAESKSCLADVEVKV+GFDAMIKILSRRRPGQLI
Sbjct: 269 XXXXXFLPPGAVNFPGHQNDAQIFETTAESKSCLADVEVKVVGFDAMIKILSRRRPGQLI 328

Query: 316 KAIAALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIASSVQQIFGFIHANTG 369
           KAIAALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIASSVQQIF FIHANTG
Sbjct: 329 KAIAALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIASSVQQIFNFIHANTG 381

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BLAST of Carg24760 vs. TAIR10
Match: AT3G24140.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 322.0 bits (824), Expect = 4.7e-88
Identity = 230/342 (67.25%), Postives = 254/342 (74.27%), Query Frame = 0


Query: 60  DKLSFAEVMQFADFGPKLSLNRF-DEDDEPAGIDPVYFLKFPVLNNE----RAEEXXXXX 119
           DK++F++VMQFADFG KL+LN+  ++DD+  GIDPVYFLKFPVLN++       +     
Sbjct: 61  DKMNFSDVMQFADFGSKLALNQTRNQDDQETGIDPVYFLKFPVLNDKIEDHNQTQHLMPS 120

Query: 120 XXXXEMGGRIVGEL--------------------XXXXXXXXXXXXXXXXXXXXXXXXXX 179
               + GG   G +                    XXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 HQTSQEGGECGGNIGNVFLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 180 XXXXXVKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIE 239
           XXXXX      VESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIE
Sbjct: 181 XXXXXXXXXXXVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIE 240

Query: 240 FVRELEQLLQCLESQKRRRLLGEPPLQAGDTXXXXXXXFLPPG--------AGNFGGHQN 299
           FVRELEQLLQCLESQKRRR+LGE        XXXXXXX              GN    + 
Sbjct: 241 FVRELEQLLQCLESQKRRRILGETGRDMTXXXXXXXXXXXXXANQAQPLIITGNVTELEG 300

Query: 300 EGQILETTAESKSCLADVEVKVLGFDAMIKILSRRRPGQLIKAIAALEDLQLNILHTNIT 359
            G + E TAE+KSCLADVEVK+LGFDAMIKILSRRRPGQLIK IAALEDL L+ILHTNIT
Sbjct: 301 GGGLREETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNIT 360

Query: 360 TIEQTVLYSFNVKIASESRFTAEDIASSVQQIFGFIHANTGM 369
           T+EQTVLYSFNVKI SE+RFTAEDIASS+QQIF FIHANT +
Sbjct: 361 TMEQTVLYSFNVKITSETRFTAEDIASSIQQIFSFIHANTNI 402

[Close]

BLAST of Carg24760 vs. TAIR10
Match: AT1G22490.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 159.1 bits (401), Expect = 5.3e-39
Identity = 93/207 (44.93%), Postives = 130/207 (62.80%), Query Frame = 0


Query: 161 KTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELE 220
           K  EE+E+QRMTHIAVERNRRKQMNE+L VLRSLMP SY QRGDQASI+GGAI +V+ELE
Sbjct: 105 KNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELE 164

Query: 221 QLLQCLESQKRRRLLGEPPLQAGDTXXXXXXXFLPPGAGNFGGHQNEGQILETTAESKSC 280
            +LQ +E ++ R    +P      T        + P    F   Q   +      ES S 
Sbjct: 165 HILQSMEPKRTR--THDPKGDKTST-----SSLVGPFTDFFSFPQYSTKSSSDVPESSSS 224

Query: 281 LADVEVKVLGFDAMIKILSRRRPGQLIKAIAALEDLQLNILHTNITTIEQTVLYSFNVKI 340
            A++EV V    A IKI+++++P QL+K I +L+ L+L +LH N+TT+  ++LYS +V++
Sbjct: 225 PAEIEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRV 284

Query: 341 ASESRF-TAEDIASSVQQIFGFIHANT 367
              S+  T +DIA+++ Q    I   T
Sbjct: 285 EEGSQLNTVDDIATALNQTIRRIQEET 304

[Close]

BLAST of Carg24760 vs. TAIR10
Match: AT3G06120.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 149.8 bits (377), Expect = 3.2e-36
Identity = 87/192 (45.31%), Postives = 118/192 (61.46%), Query Frame = 0


Query: 171 MTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQK 230
           M+HIAVERNRR+QMNEHL+ LRSL P  Y++RGDQASIIGG IEF++EL+QL+Q LES+K
Sbjct: 1   MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK 60

Query: 231 RRRLLGEPPLQAGDTXXXXXXXFLPPGAGNFGGHQN---EGQILETTAESKSCLADVEVK 290
           RR+ L  P                      F   +N        E  A   S  A+VE K
Sbjct: 61  RRKTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHANVEAK 120

Query: 291 VLGFDAMIKILSRRRPGQLIKAIAALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFT 350
           + G + +++++SRR  GQL+K I+ LE L   +LH NI+++E+TVLY F VKI  E   +
Sbjct: 121 ISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVKIGLECHLS 180

Query: 351 AEDIASSVQQIF 360
            E++   VQ+ F
Sbjct: 181 LEELTLEVQKSF 192

[Close]

BLAST of Carg24760 vs. TAIR10
Match: AT3G61950.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 148.3 bits (373), Expect = 9.4e-36
Identity = 86/201 (42.79%), Postives = 125/201 (62.19%), Query Frame = 0


Query: 161 KTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELE 220
           K +EE+E+QR+ HIAVERNRR+QMNEH+  LR+L+P SY+QRGDQASI+GGAI +V+ LE
Sbjct: 168 KNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLE 227

Query: 221 QLLQCLESQKRRRLLGEPPLQAGDTXXXXXXXFLPPGAGNFGGHQNEGQILETTAESKSC 280
           Q++Q LESQKR             T        +     +  G  +    L TT E ++C
Sbjct: 228 QIIQSLESQKR-------------TQQQSNSEVVENALNHLSGISSND--LWTTLEDQTC 287

Query: 281 LADVEVKVLGFDAMIKILSRRRPGQLIKAIAALEDLQLNILHTNITT-IEQTVLYSFNVK 340
           +  +E  V+     +K+   ++ GQL+K I +LE L+L +LH NITT    +V YSFN+K
Sbjct: 288 IPKIEATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLK 347

Query: 341 IASESRF-TAEDIASSVQQIF 360
           +  E    +A++I ++V +IF
Sbjct: 348 MEDECDLESADEITAAVHRIF 353

[Close]

BLAST of Carg24760 vs. TAIR10
Match: AT5G53210.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 146.4 bits (368), Expect = 3.6e-35
Identity = 95/264 (35.98%), Postives = 128/264 (48.48%), Query Frame = 0


Query: 169 QRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLES 228
           Q+M+H+ VERNRRKQMNEHL VLRSLMP  YV+RGDQASIIGG +E++ EL+Q+LQ LE+
Sbjct: 100 QKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEA 159

Query: 229 QKRRRLLGE---------------------------------------PPLQAGDTXXXX 288
           +K+R+   E                                       PP+         
Sbjct: 160 KKQRKTYAEVLSPRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLPPISPRTPQPTS 219

Query: 289 XXXFLP----------------------------------PGAGNFGGHQNEGQILETTA 348
               +P                                          +     I E  A
Sbjct: 220 PYRAIPXXXXXXXXXXXXXXXXXXXXXXXXDPXXXXXXXXXXXXXXSSNHESSVINELVA 279

Query: 349 ESKSCLADVEVKVLGFDAMIKILSRRRPGQLIKAIAALEDLQLNILHTNITTIEQTVLYS 360
            SKS LADVEVK  G + ++K +S + PGQ++K IAALEDL L IL  NI T+++T+L S
Sbjct: 280 NSKSALADVEVKFSGANVLLKTVSHKIPGQVMKIIAALEDLALEILQVNINTVDETMLNS 339

[Close]

BLAST of Carg24760 vs. Swiss-Prot
Match: sp|Q56YJ8|FAMA_ARATH (Transcription factor FAMA OS=Arabidopsis thaliana OX=3702 GN=FAMA PE=1 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 8.6e-87
Identity = 230/342 (67.25%), Postives = 254/342 (74.27%), Query Frame = 0


Query: 60  DKLSFAEVMQFADFGPKLSLNRF-DEDDEPAGIDPVYFLKFPVLNNE----RAEEXXXXX 119
           DK++F++VMQFADFG KL+LN+  ++DD+  GIDPVYFLKFPVLN++       +     
Sbjct: 61  DKMNFSDVMQFADFGSKLALNQTRNQDDQETGIDPVYFLKFPVLNDKIEDHNQTQHLMPS 120

Query: 120 XXXXEMGGRIVGEL--------------------XXXXXXXXXXXXXXXXXXXXXXXXXX 179
               + GG   G +                    XXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 HQTSQEGGECGGNIGNVFLEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 180 XXXXXVKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIE 239
           XXXXX      VESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIE
Sbjct: 181 XXXXXXXXXXXVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIE 240

Query: 240 FVRELEQLLQCLESQKRRRLLGEPPLQAGDTXXXXXXXFLPPG--------AGNFGGHQN 299
           FVRELEQLLQCLESQKRRR+LGE        XXXXXXX              GN    + 
Sbjct: 241 FVRELEQLLQCLESQKRRRILGETGRDMTXXXXXXXXXXXXXANQAQPLIITGNVTELEG 300

Query: 300 EGQILETTAESKSCLADVEVKVLGFDAMIKILSRRRPGQLIKAIAALEDLQLNILHTNIT 359
            G + E TAE+KSCLADVEVK+LGFDAMIKILSRRRPGQLIK IAALEDL L+ILHTNIT
Sbjct: 301 GGGLREETAENKSCLADVEVKLLGFDAMIKILSRRRPGQLIKTIAALEDLHLSILHTNIT 360

Query: 360 TIEQTVLYSFNVKIASESRFTAEDIASSVQQIFGFIHANTGM 369
           T+EQTVLYSFNVKI SE+RFTAEDIASS+QQIF FIHANT +
Sbjct: 361 TMEQTVLYSFNVKITSETRFTAEDIASSIQQIFSFIHANTNI 402

[Close]

BLAST of Carg24760 vs. Swiss-Prot
Match: sp|Q9SK91|BH094_ARATH (Transcription factor bHLH94 OS=Arabidopsis thaliana OX=3702 GN=BHLH94 PE=1 SV=2)

HSP 1 Score: 159.1 bits (401), Expect = 9.6e-38
Identity = 93/207 (44.93%), Postives = 130/207 (62.80%), Query Frame = 0


Query: 161 KTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELE 220
           K  EE+E+QRMTHIAVERNRRKQMNE+L VLRSLMP SY QRGDQASI+GGAI +V+ELE
Sbjct: 105 KNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELE 164

Query: 221 QLLQCLESQKRRRLLGEPPLQAGDTXXXXXXXFLPPGAGNFGGHQNEGQILETTAESKSC 280
            +LQ +E ++ R    +P      T        + P    F   Q   +      ES S 
Sbjct: 165 HILQSMEPKRTR--THDPKGDKTST-----SSLVGPFTDFFSFPQYSTKSSSDVPESSSS 224

Query: 281 LADVEVKVLGFDAMIKILSRRRPGQLIKAIAALEDLQLNILHTNITTIEQTVLYSFNVKI 340
            A++EV V    A IKI+++++P QL+K I +L+ L+L +LH N+TT+  ++LYS +V++
Sbjct: 225 PAEIEVTVAESHANIKIMTKKKPRQLLKLITSLQSLRLTLLHLNVTTLHNSILYSISVRV 284

Query: 341 ASESRF-TAEDIASSVQQIFGFIHANT 367
              S+  T +DIA+++ Q    I   T
Sbjct: 285 EEGSQLNTVDDIATALNQTIRRIQEET 304

[Close]

BLAST of Carg24760 vs. Swiss-Prot
Match: sp|Q9M8K6|MUTE_ARATH (Transcription factor MUTE OS=Arabidopsis thaliana OX=3702 GN=MUTE PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 5.8e-35
Identity = 87/192 (45.31%), Postives = 118/192 (61.46%), Query Frame = 0


Query: 171 MTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQK 230
           M+HIAVERNRR+QMNEHL+ LRSL P  Y++RGDQASIIGG IEF++EL+QL+Q LES+K
Sbjct: 1   MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK 60

Query: 231 RRRLLGEPPLQAGDTXXXXXXXFLPPGAGNFGGHQN---EGQILETTAESKSCLADVEVK 290
           RR+ L  P                      F   +N        E  A   S  A+VE K
Sbjct: 61  RRKTLNRPSFPYDHQTIEPSSLGAATTRVPFSRIENVMTTSTFKEVGACCNSPHANVEAK 120

Query: 291 VLGFDAMIKILSRRRPGQLIKAIAALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFT 350
           + G + +++++SRR  GQL+K I+ LE L   +LH NI+++E+TVLY F VKI  E   +
Sbjct: 121 ISGSNVVLRVVSRRIVGQLVKIISVLEKLSFQVLHLNISSMEETVLYFFVVKIGLECHLS 180

Query: 351 AEDIASSVQQIF 360
            E++   VQ+ F
Sbjct: 181 LEELTLEVQKSF 192

[Close]

BLAST of Carg24760 vs. Swiss-Prot
Match: sp|Q700E4|BH067_ARATH (Transcription factor bHLH67 OS=Arabidopsis thaliana OX=3702 GN=BHLH67 PE=2 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.7e-34
Identity = 86/201 (42.79%), Postives = 125/201 (62.19%), Query Frame = 0


Query: 161 KTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELE 220
           K +EE+E+QR+ HIAVERNRR+QMNEH+  LR+L+P SY+QRGDQASI+GGAI +V+ LE
Sbjct: 168 KNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVLE 227

Query: 221 QLLQCLESQKRRRLLGEPPLQAGDTXXXXXXXFLPPGAGNFGGHQNEGQILETTAESKSC 280
           Q++Q LESQKR             T        +     +  G  +    L TT E ++C
Sbjct: 228 QIIQSLESQKR-------------TQQQSNSEVVENALNHLSGISSND--LWTTLEDQTC 287

Query: 281 LADVEVKVLGFDAMIKILSRRRPGQLIKAIAALEDLQLNILHTNITT-IEQTVLYSFNVK 340
           +  +E  V+     +K+   ++ GQL+K I +LE L+L +LH NITT    +V YSFN+K
Sbjct: 288 IPKIEATVIQNHVSLKVQCEKKQGQLLKGIISLEKLKLTVLHLNITTSSHSSVSYSFNLK 347

Query: 341 IASESRF-TAEDIASSVQQIF 360
           +  E    +A++I ++V +IF
Sbjct: 348 MEDECDLESADEITAAVHRIF 353

[Close]

BLAST of Carg24760 vs. Swiss-Prot
Match: sp|Q700C7|SPCH_ARATH (Transcription factor SPEECHLESS OS=Arabidopsis thaliana OX=3702 GN=SPCH PE=1 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 6.4e-34
Identity = 95/264 (35.98%), Postives = 128/264 (48.48%), Query Frame = 0


Query: 169 QRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLES 228
           Q+M+H+ VERNRRKQMNEHL VLRSLMP  YV+RGDQASIIGG +E++ EL+Q+LQ LE+
Sbjct: 100 QKMSHVTVERNRRKQMNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEA 159

Query: 229 QKRRRLLGE---------------------------------------PPLQAGDTXXXX 288
           +K+R+   E                                       PP+         
Sbjct: 160 KKQRKTYAEVLSPRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLLPPISPRTPQPTS 219

Query: 289 XXXFLP----------------------------------PGAGNFGGHQNEGQILETTA 348
               +P                                          +     I E  A
Sbjct: 220 PYRAIPXXXXXXXXXXXXXXXXXXXXXXXXDPXXXXXXXXXXXXXXSSNHESSVINELVA 279

Query: 349 ESKSCLADVEVKVLGFDAMIKILSRRRPGQLIKAIAALEDLQLNILHTNITTIEQTVLYS 360
            SKS LADVEVK  G + ++K +S + PGQ++K IAALEDL L IL  NI T+++T+L S
Sbjct: 280 NSKSALADVEVKFSGANVLLKTVSHKIPGQVMKIIAALEDLALEILQVNINTVDETMLNS 339

[Close]

BLAST of Carg24760 vs. TrEMBL
Match: tr|A0A1S4DSQ1|A0A1S4DSQ1_CUCME (transcription factor FAMA OS=Cucumis melo OX=3656 GN=LOC103483486 PE=4 SV=1)

HSP 1 Score: 504.6 bits (1298), Expect = 1.9e-139
Identity = 308/358 (86.03%), Postives = 317/358 (88.55%), Query Frame = 0


Query: 16  LYNNQDQFMRSRP-FETSADNATGILTYFPANPLPPPPLQSVTSPDKLSFAEVMQFADFG 75
           LYNNQDQFMRSRP FETSADN+TGILTYFPANP        +TSPDKLSF EVMQFADFG
Sbjct: 29  LYNNQDQFMRSRPNFETSADNSTGILTYFPANP--------ITSPDKLSFGEVMQFADFG 88

Query: 76  PKLSLNRFDEDDEPAGIDPVYFLKFPVLNNERAEE---XXXXXXXXXEMGGRIVGELXXX 135
           PKLSLNRFD+D EP GIDPVYFLKFPVLNNER EE            E+GGR +  +   
Sbjct: 89  PKLSLNRFDDDSEPPGIDPVYFLKFPVLNNERVEETATTGGETEEAAEIGGRSLNIVGEV 148

Query: 136 XXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTSEEVESQRMTHIAVERNRRKQMNEHLRVL 195
            XXXXXXXXXXXXXXXXXXXXXXXXXXX KTSEEVESQRMTHIAVERNRRKQMNEHLRVL
Sbjct: 149 EXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTSEEVESQRMTHIAVERNRRKQMNEHLRVL 208

Query: 196 RSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGEPPL-QAGDTXXXXX 255
           RSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGE P+ QA DT XXXX
Sbjct: 209 RSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGESPIVQAADTPXXXX 268

Query: 256 XXFLPPGAGNFGGHQNEGQILETTAESKSCLADVEVKVLGFDAMIKILSRRRPGQLIKAI 315
           XXFLPPGA NF GHQN+GQI ETTAESKSCLADVEVKV+GFDAMIKILSRRRPGQLIKAI
Sbjct: 269 XXFLPPGASNFAGHQNDGQIFETTAESKSCLADVEVKVIGFDAMIKILSRRRPGQLIKAI 328

Query: 316 AALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIASSVQQIFGFIHANTGM 369
           AALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIASSVQQIF FIHANTGM
Sbjct: 329 AALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIASSVQQIFNFIHANTGM 378

[Close]

BLAST of Carg24760 vs. TrEMBL
Match: tr|A0A0A0L9F4|A0A0A0L9F4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G131940 PE=4 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 3.3e-128
Identity = 304/361 (84.21%), Postives = 312/361 (86.43%), Query Frame = 0


Query: 16  LYNNQDQFMRSRP-FETSADNATGILTYFPANPLPPPPLQSVTSPDKLSFAEVMQFADFG 75
           LYNNQDQFMRSRP FETSADN+TGILTYFP NP        +TSPDKLSF EVMQFADFG
Sbjct: 29  LYNNQDQFMRSRPNFETSADNSTGILTYFPPNP--------ITSPDKLSFGEVMQFADFG 88

Query: 76  PKLSLNRFDEDD-EPAGIDPVYFLKFPVLNNERAEE--XXXXXXXXXEMGGR--IVGEL- 135
           PKLSLNRFD+DD EP GIDPVYFLKFPVLNNER E+           E+GGR  +VGEL 
Sbjct: 89  PKLSLNRFDDDDSEPPGIDPVYFLKFPVLNNERVEDTAGGGETEEAAEIGGRSLVVGELX 148

Query: 136 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTSEEVESQRMTHIAVERNRRKQMNEHL 195
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTSEEVESQRMTHIAVERNRRKQMNEHL
Sbjct: 149 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTSEEVESQRMTHIAVERNRRKQMNEHL 208

Query: 196 RVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQK-RRRLLGEPPLQAGDTXX 255
           RVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQK                XX
Sbjct: 209 RVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKXXXXXXXXXXXXXXXXXX 268

Query: 256 XXXXXFLPPGAGNFGGHQNEGQILETTAESKSCLADVEVKVLGFDAMIKILSRRRPGQLI 315
           XXXXXFLPPGA NF GHQN+ QI ETTAESKSCLADVEVKV+GFDAMIKILSRRRPGQLI
Sbjct: 269 XXXXXFLPPGAVNFPGHQNDAQIFETTAESKSCLADVEVKVVGFDAMIKILSRRRPGQLI 328

Query: 316 KAIAALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIASSVQQIFGFIHANTG 369
           KAIAALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIASSVQQIF FIHANTG
Sbjct: 329 KAIAALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIASSVQQIFNFIHANTG 381

[Close]

BLAST of Carg24760 vs. TrEMBL
Match: tr|A0A2C9W943|A0A2C9W943_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G148500 PE=4 SV=1)

HSP 1 Score: 378.6 bits (971), Expect = 1.6e-101
Identity = 230/378 (60.85%), Postives = 249/378 (65.87%), Query Frame = 0


Query: 17  YNNQDQ-FMRSRPFETSADNATGILTYFPANPLPPPPLQS-----VTSPDKLSFAEVMQF 76
           +  QDQ F +SR  E S DN+ G++ Y   NP P     S      TS DKLSFA+VMQF
Sbjct: 23  HQQQDQEFTKSRISEASGDNSNGMIDYMLNNPHPHQQQLSSGFCTSTSLDKLSFADVMQF 82

Query: 77  ADFGPKLSLNRFDEDDEPAGIDPVYFLKFPVLNNERAEEXXXXXXXXXEMGGRIVGE--- 136
           ADFGPKL+LN+    +E  GIDPVYFLKFPVLN++R  +         E    I+GE   
Sbjct: 83  ADFGPKLALNQTRISEEETGIDPVYFLKFPVLNDKREGQSLMVPQLSGENKAGIMGEDRA 142

Query: 137 -----------LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTSEEVESQRMTHIAV 196
                                                      +KTSEEVESQRMTHIAV
Sbjct: 143 VREEEEARVSDNTSVQLQFLGDQDLQNKNPIPEAKNKRKRPRTIKTSEEVESQRMTHIAV 202

Query: 197 ERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLG 256
           ERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELE LLQCLESQKRRRL G
Sbjct: 203 ERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEHLLQCLESQKRRRLYG 262

Query: 257 EPPLQAGDT---XXXXXXXFLPP---GAGNFGGHQNEGQILETTAESKSCLADVEVKVLG 316
           E   Q GD+          F PP             E ++ E TAE+KSCLADVEVKVLG
Sbjct: 263 EGSRQMGDSSLAIQQPQPPFFPPLPLQNDQMKLVDFETELREETAENKSCLADVEVKVLG 322

Query: 317 FDAMIKILSRRRPGQLIKAIAALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAED 369
           FDAMIKILSRRRPGQLIK IAALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAED
Sbjct: 323 FDAMIKILSRRRPGQLIKTIAALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAED 382

[Close]

BLAST of Carg24760 vs. TrEMBL
Match: tr|A0A0R6HH96|A0A0R6HH96_VITVI (FAMA OS=Vitis vinifera OX=29760 GN=FAMA PE=4 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 7.2e-99
Identity = 225/376 (59.84%), Postives = 251/376 (66.76%), Query Frame = 0


Query: 20  QDQFMRSRPFETSADNATGILTYFPANPLPPPPLQS---VTSPDKLSFAEVMQFADFGPK 79
           Q+Q M+ R  E+S DN  G++ Y  +NP       S    +S DKLSFA+VMQFADFGPK
Sbjct: 28  QEQLMKPRIGESSDDNNHGVVDYMLSNPQHQQLTSSGFCSSSFDKLSFADVMQFADFGPK 87

Query: 80  LSLNRFDEDDEPAGIDPVYFLKFPVLNNERAEEXXXXXXXXXEMGG-------RIVGEL- 139
           L+LN+    +E  GIDPVYFLKFPVL N++ ++          +GG       RIV E+ 
Sbjct: 88  LALNQTKVSEEETGIDPVYFLKFPVL-NDKLQDHDSLMVPQPVVGGEERYDEARIVEEIG 147

Query: 140 ------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTSEEVESQRMTHIAVERNRRK 199
                                                +KTSEEVESQRMTHIAVERNRRK
Sbjct: 148 EGEDEEENTSVQLQFLGENLQKNTVMDAKNKRKRPRTIKTSEEVESQRMTHIAVERNRRK 207

Query: 200 QMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGEPPLQA 259
           QMNEHLRVLRSLMP SYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRL G+ P Q 
Sbjct: 208 QMNEHLRVLRSLMPSSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLFGDAPRQM 267

Query: 260 GDT-----XXXXXXXFLPP-----GAGNFGGHQNEGQILETTAESKSCLADVEVKVLGFD 319
           GD+            F PP        NFG       + E TAE+KSCLADVEV++LGFD
Sbjct: 268 GDSSSLAIQQPQQPPFFPPLPLPNDQINFG-----TGLREETAENKSCLADVEVRLLGFD 327

Query: 320 AMIKILSRRRPGQLIKAIAALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIA 369
           AMIKILSRRRPGQLIK IAALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIA
Sbjct: 328 AMIKILSRRRPGQLIKTIAALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIA 387

[Close]

BLAST of Carg24760 vs. TrEMBL
Match: tr|A0A0R6GC48|A0A0R6GC48_VITVI (FAMA(L) OS=Vitis vinifera OX=29760 GN=FAMA PE=2 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 7.2e-99
Identity = 225/376 (59.84%), Postives = 251/376 (66.76%), Query Frame = 0


Query: 20  QDQFMRSRPFETSADNATGILTYFPANPLPPPPLQS---VTSPDKLSFAEVMQFADFGPK 79
           Q+Q M+ R  E+S DN  G++ Y  +NP       S    +S DKLSFA+VMQFADFGPK
Sbjct: 31  QEQLMKPRIGESSDDNNHGVVDYMLSNPQHQQLTSSGFCSSSFDKLSFADVMQFADFGPK 90

Query: 80  LSLNRFDEDDEPAGIDPVYFLKFPVLNNERAEEXXXXXXXXXEMGG-------RIVGEL- 139
           L+LN+    +E  GIDPVYFLKFPVL N++ ++          +GG       RIV E+ 
Sbjct: 91  LALNQTKVSEEETGIDPVYFLKFPVL-NDKLQDHDSLMVPQPVVGGEERYDEARIVEEIG 150

Query: 140 ------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVKTSEEVESQRMTHIAVERNRRK 199
                                                +KTSEEVESQRMTHIAVERNRRK
Sbjct: 151 EGEDEEENTSVQLQFLGENLQKNTVMDAKNKRKRPRTIKTSEEVESQRMTHIAVERNRRK 210

Query: 200 QMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLLGEPPLQA 259
           QMNEHLRVLRSLMP SYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRL G+ P Q 
Sbjct: 211 QMNEHLRVLRSLMPSSYVQRGDQASIIGGAIEFVRELEQLLQCLESQKRRRLFGDAPRQM 270

Query: 260 GDT-----XXXXXXXFLPP-----GAGNFGGHQNEGQILETTAESKSCLADVEVKVLGFD 319
           GD+            F PP        NFG       + E TAE+KSCLADVEV++LGFD
Sbjct: 271 GDSSSLAIQQPQQPPFFPPLPLPNDQINFG-----TGLREETAENKSCLADVEVRLLGFD 330

Query: 320 AMIKILSRRRPGQLIKAIAALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIA 369
           AMIKILSRRRPGQLIK IAALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIA
Sbjct: 331 AMIKILSRRRPGQLIKTIAALEDLQLNILHTNITTIEQTVLYSFNVKIASESRFTAEDIA 390

The following BLAST results are available for this feature:

BLAST of Carg24760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924298.1	3.1e-162	98.11	transcription factor FAMA [Cucurbita moschata] >XP_022924299.1 transcription fac...	[more]
XP_023526629.1	7.7e-161	95.19	transcription factor FAMA [Cucurbita pepo subsp. pepo] >XP_023526630.1 transcrip...	[more]
XP_022980321.1	8.0e-158	95.76	transcription factor FAMA [Cucurbita maxima] >XP_022980322.1 transcription facto...	[more]
XP_016898993.1	2.8e-139	86.03	PREDICTED: transcription factor FAMA [Cucumis melo]	[more]
XP_004133999.2	5.0e-128	84.21	PREDICTED: transcription factor FAMA [Cucumis sativus] >XP_011650878.1 PREDICTED...	[more]

BLAST of Carg24760 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G24140.1	4.7e-88	67.25	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT1G22490.1	5.3e-39	44.93	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G06120.1	3.2e-36	45.31	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G61950.1	9.4e-36	42.79	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G53210.1	3.6e-35	35.98	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

BLAST of Carg24760 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q56YJ8\|FAMA_ARATH	8.6e-87	67.25	Transcription factor FAMA OS=Arabidopsis thaliana OX=3702 GN=FAMA PE=1 SV=1	[more]
sp\|Q9SK91\|BH094_ARATH	9.6e-38	44.93	Transcription factor bHLH94 OS=Arabidopsis thaliana OX=3702 GN=BHLH94 PE=1 SV=2	[more]
sp\|Q9M8K6\|MUTE_ARATH	5.8e-35	45.31	Transcription factor MUTE OS=Arabidopsis thaliana OX=3702 GN=MUTE PE=2 SV=1	[more]
sp\|Q700E4\|BH067_ARATH	1.7e-34	42.79	Transcription factor bHLH67 OS=Arabidopsis thaliana OX=3702 GN=BHLH67 PE=2 SV=1	[more]
sp\|Q700C7\|SPCH_ARATH	6.4e-34	35.98	Transcription factor SPEECHLESS OS=Arabidopsis thaliana OX=3702 GN=SPCH PE=1 SV=...	[more]

BLAST of Carg24760 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DSQ1\|A0A1S4DSQ1_CUCME	1.9e-139	86.03	transcription factor FAMA OS=Cucumis melo OX=3656 GN=LOC103483486 PE=4 SV=1	[more]
tr\|A0A0A0L9F4\|A0A0A0L9F4_CUCSA	3.3e-128	84.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G131940 PE=4 SV=1	[more]
tr\|A0A2C9W943\|A0A2C9W943_MANES	1.6e-101	60.85	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_03G148500 PE=4 SV=...	[more]
tr\|A0A0R6HH96\|A0A0R6HH96_VITVI	7.2e-99	59.84	FAMA OS=Vitis vinifera OX=29760 GN=FAMA PE=4 SV=1	[more]
tr\|A0A0R6GC48\|A0A0R6GC48_VITVI	7.2e-99	59.84	FAMA(L) OS=Vitis vinifera OX=29760 GN=FAMA PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046983	protein dimerization activity

Vocabulary: **INTERPRO**
Term	Definition
IPR002912	ACT_dom
IPR036638	HLH_DNA-bd_sf
IPR011598	bHLH_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0046983	protein dimerization activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24760-RA	Carg24760-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 174..225 e-value: 3.4E-9 score: 46.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 169..220 e-value: 1.1E-9 score: 38.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 168..219 score: 15.428
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	CDD	cd00083	HLH	coord: 167..224 e-value: 6.86274E-13 score: 62.2315
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	G3DSA:4.10.280.10		coord: 159..234 e-value: 5.3E-12 score: 47.5
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	SSF47459	HLH, helix-loop-helix DNA-binding domain	coord: 168..239
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 241..255
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 237..266
None	No IPR available	PANTHER	PTHR11514	MYC	coord: 37..368
None	No IPR available	PANTHER	PTHR11514:SF61	TRANSCRIPTION FACTOR FAMA	coord: 37..368
None	No IPR available	CDD	cd04873	ACT_UUR-ACR-like	coord: 294..358 e-value: 0.00250017 score: 34.8313
IPR002912	ACT domain	PROSITE	PS51671	ACT	coord: 294..368 score: 8.642

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24760	Cla021422	Watermelon (97103) v1	carwmB0164
Carg24760	Csa3G131940	Cucumber (Chinese Long) v2	carcuB0193
Carg24760	MELO3C006315	Melon (DHL92) v3.5.1	carmeB0179
Carg24760	ClCG05G003350	Watermelon (Charleston Gray)	carwcgB0166
Carg24760	CSPI03G10910	Wild cucumber (PI 183967)	carcpiB0200
Carg24760	Cucsa.256420	Cucumber (Gy14) v1	carcgyB0213
Carg24760	CmaCh14G018910	Cucurbita maxima (Rimu)	carcmaB0234
Carg24760	CmoCh14G019430	Cucurbita moschata (Rifu)	carcmoB0243
Carg24760	Lsi05G018350	Bottle gourd (USVL1VR-Ls)	carlsiB156
Carg24760	Cp4.1LG03g18420	Cucurbita pepo (Zucchini)	carcpeB0250
Carg24760	CsGy3G010970	Cucumber (Gy14) v2	carcgybB0187
Carg24760	MELO3C006315.2	Melon (DHL92) v3.6.1	carmedB0183
Carg24760	CsaV3_3G011010	Cucumber (Chinese Long) v3	carcucB0200
Carg24760	Cla97C05G084000	Watermelon (97103) v2	carwmbB0179
Carg24760	Bhi01G000168	Wax gourd	carwgoB0224

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg24760	Silver-seed gourd	carcarB211
Carg24760	Cucurbita maxima (Rimu)	carcmaB0235
Carg24760	Cucurbita maxima (Rimu)	carcmaB0236
Carg24760	Cucurbita moschata (Rifu)	carcmoB0244
Carg24760	Cucurbita pepo (Zucchini)	carcpeB0251