Carg24732 (gene) Silver-seed gourd

Overview
NameCarg24732
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionLate embryogenesis abundant protein
LocationCucurbita_argyrosperma_scaffold_259 : 80544 .. 81410 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTCCTCTACCTCCTCTTCCGCCGCCGCCATCTTTTATATCTCCATCGACAAGGTCGCCGCTGTCCAGAGCTGCCGCTCTACCAACAACTATACTGTCCCCTGCCTCTGCTGCAGTCTCTCAAGCATCTGCTCAGAACCCTGCTGCTTCATCTTCAAGAGAGGCAGAGCTGGCTTCTTTGAAGCAAATAGTTGTGCAAAATCGAGCTATGAAACCGCATAGTCCACTGCTGAATTCAAATCATATTGATTCTAGTAAGTATAGTAAGCCACAGTTATTACAGCAAGCTCGGCCACGCCAAACGAATCCGATTATATGGTGTTTTGCATTCCTGTGTCTACTTTTTAGTCTTCTTCTCATCTTCCTTGGAATTGCCACTTTGATCATTTTCCTGGTTGTTAGACCAAGAAATCCTGTGTTTGACATACCAAATGCAAGCCTCAGCACCATCTACTTTGATGCACCTGAATATCTCAATGGAGACTTCACTCTTCTCGCAAACTTCACCAACCCGAACCAAAGAGTCGATGTGAGATATGAGAATGCAGACATAGAGCTCTTCTTTGGGGATCGACTCATAGCAACTCAAGCAATCCAGCCCTTCAGTCAAAGAAAAAAAGAAGTGAGGTTACAACCTGTTCATTTGATATCCAGTCTAGTTTTCTTGCCACAGAATTTCGGGTTGGTACTTCGACGACAGGTACAGAACAACAAGATTGTCTATAACATCAGAGGAACTTTCAAGGTCAAAGCTTCACTGGGTTTCGTCCATTACTCTTACTGGCTGCATAGCCGATGCGAGTTGGTGATGACTAGTCCACCAACTGGCGCTCTAGTTGCTCGGAGTTGCAGAACCAAGAGGTGA

mRNA sequence

ATGCCTCCTCTACCTCCTCTTCCGCCGCCGCCATCTTTTATATCTCCATCGACAAGGTCGCCGCTGTCCAGAGCTGCCGCTCTACCAACAACTATACTGTCCCCTGCCTCTGCTGCAGTCTCTCAAGCATCTGCTCAGAACCCTGCTGCTTCATCTTCAAGAGAGGCAGAGCTGGCTTCTTTGAAGCAAATAGTTGTGCAAAATCGAGCTATGAAACCGCATAGTCCACTGCTGAATTCAAATCATATTGATTCTAGTAAGTATAGTAAGCCACAGTTATTACAGCAAGCTCGGCCACGCCAAACGAATCCGATTATATGGTGTTTTGCATTCCTGTGTCTACTTTTTAGTCTTCTTCTCATCTTCCTTGGAATTGCCACTTTGATCATTTTCCTGGTTGTTAGACCAAGAAATCCTGTGTTTGACATACCAAATGCAAGCCTCAGCACCATCTACTTTGATGCACCTGAATATCTCAATGGAGACTTCACTCTTCTCGCAAACTTCACCAACCCGAACCAAAGAGTCGATGTGAGATATGAGAATGCAGACATAGAGCTCTTCTTTGGGGATCGACTCATAGCAACTCAAGCAATCCAGCCCTTCAGTCAAAGAAAAAAAGAAGTGAGGTTACAACCTGTTCATTTGATATCCAGTCTAGTTTTCTTGCCACAGAATTTCGGGTTGGTACTTCGACGACAGGTACAGAACAACAAGATTGTCTATAACATCAGAGGAACTTTCAAGGTCAAAGCTTCACTGGGTTTCGTCCATTACTCTTACTGGCTGCATAGCCGATGCGAGTTGGTGATGACTAGTCCACCAACTGGCGCTCTAGTTGCTCGGAGTTGCAGAACCAAGAGGTGA

Coding sequence (CDS)

ATGCCTCCTCTACCTCCTCTTCCGCCGCCGCCATCTTTTATATCTCCATCGACAAGGTCGCCGCTGTCCAGAGCTGCCGCTCTACCAACAACTATACTGTCCCCTGCCTCTGCTGCAGTCTCTCAAGCATCTGCTCAGAACCCTGCTGCTTCATCTTCAAGAGAGGCAGAGCTGGCTTCTTTGAAGCAAATAGTTGTGCAAAATCGAGCTATGAAACCGCATAGTCCACTGCTGAATTCAAATCATATTGATTCTAGTAAGTATAGTAAGCCACAGTTATTACAGCAAGCTCGGCCACGCCAAACGAATCCGATTATATGGTGTTTTGCATTCCTGTGTCTACTTTTTAGTCTTCTTCTCATCTTCCTTGGAATTGCCACTTTGATCATTTTCCTGGTTGTTAGACCAAGAAATCCTGTGTTTGACATACCAAATGCAAGCCTCAGCACCATCTACTTTGATGCACCTGAATATCTCAATGGAGACTTCACTCTTCTCGCAAACTTCACCAACCCGAACCAAAGAGTCGATGTGAGATATGAGAATGCAGACATAGAGCTCTTCTTTGGGGATCGACTCATAGCAACTCAAGCAATCCAGCCCTTCAGTCAAAGAAAAAAAGAAGTGAGGTTACAACCTGTTCATTTGATATCCAGTCTAGTTTTCTTGCCACAGAATTTCGGGTTGGTACTTCGACGACAGGTACAGAACAACAAGATTGTCTATAACATCAGAGGAACTTTCAAGGTCAAAGCTTCACTGGGTTTCGTCCATTACTCTTACTGGCTGCATAGCCGATGCGAGTTGGTGATGACTAGTCCACCAACTGGCGCTCTAGTTGCTCGGAGTTGCAGAACCAAGAGGTGA

Protein sequence

MPPLPPLPPPPSFISPSTRSPLSRAAALPTTILSPASAAVSQASAQNPAASSSREAELASLKQIVVQNRAMKPHSPLLNSNHIDSSKYSKPQLLQQARPRQTNPIIWCFAFLCLLFSLLLIFLGIATLIIFLVVRPRNPVFDIPNASLSTIYFDAPEYLNGDFTLLANFTNPNQRVDVRYENADIELFFGDRLIATQAIQPFSQRKKEVRLQPVHLISSLVFLPQNFGLVLRRQVQNNKIVYNIRGTFKVKASLGFVHYSYWLHSRCELVMTSPPTGALVARSCRTKR
Homology
[Close]
BLAST of Carg24732 vs. NCBI nr
Match: XP_022936034.1 (uncharacterized protein LOC111442755 [Cucurbita moschata])

HSP 1 Score: 535.4 bits (1378), Expect = 1.2e-148
Identity = 280/288 (97.22%), Postives = 281/288 (97.57%), Query Frame = 0 

Query: 1   MPPLXXXXXXXSFISPSTRSPLSRAAALPTTILSPASAAVSQASAQNPAASSSREAELAS 60
           MPPL       SFISPSTRSPLSRAAALPTT+LSPASAAVSQASAQNPAASSSREAELAS
Sbjct: 1   MPPLPPLRPPPSFISPSTRSPLSRAAALPTTVLSPASAAVSQASAQNPAASSSREAELAS 60

Query: 61  LKQIVVQNRAMKPHSPLLNSNHIDSSKYSKPQLLQQARPRQTNPIIWCFAFLCLLFSLLL 120
           LKQIVVQNRAMKPHSPLLNSNHIDSSKYSKPQLLQQARPRQTNPIIWCFAFLCLLFSLLL
Sbjct: 61  LKQIVVQNRAMKPHSPLLNSNHIDSSKYSKPQLLQQARPRQTNPIIWCFAFLCLLFSLLL 120

Query: 121 IFLGIATLIIFLVVRPRNPVFDIPNASLSTIYFDAPEYLNGDFTLLANFTNPNQRVDVRY 180
           IFLGIATLIIFLVVRPRNPVFDIPNASLSTIYFDAPEYLNGDFTLLANFTNPNQRVDVRY
Sbjct: 121 IFLGIATLIIFLVVRPRNPVFDIPNASLSTIYFDAPEYLNGDFTLLANFTNPNQRVDVRY 180

Query: 181 ENADIELFFGDRLIATQAIQPFSQRKKEVRLQPVHLISSLVFLPQNFGLVLRRQVQNNKI 240
           ENADIELFFGDRLIATQAIQPFSQRKKEVRLQPVHLISSLVFLPQNFGLVLRRQVQNNKI
Sbjct: 181 ENADIELFFGDRLIATQAIQPFSQRKKEVRLQPVHLISSLVFLPQNFGLVLRRQVQNNKI 240

Query: 241 VYNIRGTFKVKASLGFVHYSYWLHSRCELVMTSPPTGALVARSCRTKR 289
           VYNIRGTFKVKASLGFVHYSYWLHSRCELVMTSPPTGALVARSCRTKR
Sbjct: 241 VYNIRGTFKVKASLGFVHYSYWLHSRCELVMTSPPTGALVARSCRTKR 288

[Close]
BLAST of Carg24732 vs. NCBI nr
Match: XP_022976037.1 (uncharacterized protein LOC111476559 [Cucurbita maxima])

HSP 1 Score: 520.8 bits (1340), Expect = 3.0e-144
Identity = 271/276 (98.19%), Postives = 273/276 (98.91%), Query Frame = 0 

Query: 13  FISPSTRSPLSRAAALPTTILSPASAAVSQASAQNPAASSSREAELASLKQIVVQNRAMK 72
           FISPSTRSPLSRAAALPTTILSPASAAVSQASA NPAASSSREAELASLKQIVVQNRAMK
Sbjct: 19  FISPSTRSPLSRAAALPTTILSPASAAVSQASAPNPAASSSREAELASLKQIVVQNRAMK 78

Query: 73  PHSPLLNSNHIDSSKYSKPQLLQQARPRQTNPIIWCFAFLCLLFSLLLIFLGIATLIIFL 132
           PHSPLLNSNHIDSSKYSKPQLLQQARPRQTNPIIWCFAFLCLLFSLLLIFLGIATLIIFL
Sbjct: 79  PHSPLLNSNHIDSSKYSKPQLLQQARPRQTNPIIWCFAFLCLLFSLLLIFLGIATLIIFL 138

Query: 133 VVRPRNPVFDIPNASLSTIYFDAPEYLNGDFTLLANFTNPNQRVDVRYENADIELFFGDR 192
           VVRPRNPVFDIPNASLSTIYFDAPEYLNGDFTLLANFTNPNQRVDVRYENADIELFFGDR
Sbjct: 139 VVRPRNPVFDIPNASLSTIYFDAPEYLNGDFTLLANFTNPNQRVDVRYENADIELFFGDR 198

Query: 193 LIATQAIQPFSQRKKEVRLQPVHLISSLVFLPQNFGLVLRRQVQNNKIVYNIRGTFKVKA 252
           LIATQAIQPFSQRKKEVRLQPVHLISSLVFLPQNFGL +RRQVQNNKIVYNIRGTF+VKA
Sbjct: 199 LIATQAIQPFSQRKKEVRLQPVHLISSLVFLPQNFGLEIRRQVQNNKIVYNIRGTFRVKA 258

Query: 253 SLGFVHYSYWLHSRCELVMTSPPTGALVARSCRTKR 289
           SLGFVHYSYWLHSRCELVMTSPPTG LVARSCRTKR
Sbjct: 259 SLGFVHYSYWLHSRCELVMTSPPTGTLVARSCRTKR 294

[Close]
BLAST of Carg24732 vs. NCBI nr
Match: XP_023535843.1 (uncharacterized protein LOC111797152 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 513.1 bits (1320), Expect = 6.3e-142
Identity = 270/276 (97.83%), Postives = 272/276 (98.55%), Query Frame = 0 

Query: 13  FISPSTRSPLSRAAALPTTILSPASAAVSQASAQNPAASSSREAELASLKQIVVQNRAMK 72
           FISPSTRSPLSRAAALPTTILSPASAAVSQA    PAASSSREAE+ASLKQIVVQNRAMK
Sbjct: 16  FISPSTRSPLSRAAALPTTILSPASAAVSQA----PAASSSREAEMASLKQIVVQNRAMK 75

Query: 73  PHSPLLNSNHIDSSKYSKPQLLQQARPRQTNPIIWCFAFLCLLFSLLLIFLGIATLIIFL 132
           P+SPLLNSNHIDSSKYSKPQLLQQARPRQTNPIIWCFAFLCLLFSLLLIFLGIATLIIFL
Sbjct: 76  PNSPLLNSNHIDSSKYSKPQLLQQARPRQTNPIIWCFAFLCLLFSLLLIFLGIATLIIFL 135

Query: 133 VVRPRNPVFDIPNASLSTIYFDAPEYLNGDFTLLANFTNPNQRVDVRYENADIELFFGDR 192
           VVRPRNPVFDIPNASLSTIYFDAPEYLNGDFTLLANFTNPNQRVDVRYENADIELFFGDR
Sbjct: 136 VVRPRNPVFDIPNASLSTIYFDAPEYLNGDFTLLANFTNPNQRVDVRYENADIELFFGDR 195

Query: 193 LIATQAIQPFSQRKKEVRLQPVHLISSLVFLPQNFGLVLRRQVQNNKIVYNIRGTFKVKA 252
           LIATQAIQPFSQRKKEVRLQPVHLISSLVFLPQNFGLVLRRQVQNNKIVYNIRGTFKVKA
Sbjct: 196 LIATQAIQPFSQRKKEVRLQPVHLISSLVFLPQNFGLVLRRQVQNNKIVYNIRGTFKVKA 255

Query: 253 SLGFVHYSYWLHSRCELVMTSPPTGALVARSCRTKR 289
           SLGFVHYSYWLHSRCELVMTSPPTGALVARSCRTKR
Sbjct: 256 SLGFVHYSYWLHSRCELVMTSPPTGALVARSCRTKR 287

[Close]
BLAST of Carg24732 vs. NCBI nr
Match: XP_023523222.1 (uncharacterized protein LOC111787482 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 436.4 bits (1121), Expect = 7.4e-119
Identity = 223/265 (84.15%), Postives = 245/265 (92.45%), Query Frame = 0 

Query: 25  AAALPTTILSPASAAVSQASAQ-NPAASSSREAELASLKQIVVQNRAMKPHSPLLNSNHI 84
           AAALPTTI SPASAAV+QASA   PAAS SR+A+L  L+QIV+Q++A +PH+PLLN N I
Sbjct: 33  AAALPTTIPSPASAAVTQASAALIPAASPSRQADLTPLEQIVIQDQATRPHTPLLNPNTI 92

Query: 85  DSSKYSKPQLLQQARPRQTNPIIWCFAFLCLLFSLLLIFLGIATLIIFLVVRPRNPVFDI 144
           DSS Y K QLLQQARPRQTNPIIWCFA LCL+FSLLLIFLGIATLIIFLVVRPRNP+FDI
Sbjct: 93  DSSNYRKSQLLQQARPRQTNPIIWCFAILCLIFSLLLIFLGIATLIIFLVVRPRNPMFDI 152

Query: 145 PNASLSTIYFDAPEYLNGDFTLLANFTNPNQRVDVRYENADIELFFGDRLIATQAIQPFS 204
           PNASLSTIYFDAPEYLNGDFT+LANFTNPN R+DVRYENADIELFFGDRLIATQAIQPFS
Sbjct: 153 PNASLSTIYFDAPEYLNGDFTVLANFTNPNHRIDVRYENADIELFFGDRLIATQAIQPFS 212

Query: 205 QRKKEVRLQPVHLISSLVFLPQNFGLVLRRQVQNNKIVYNIRGTFKVKASLGFVHYSYWL 264
           QRK+EVRLQPVHLISSLV+LPQN G +LRRQVQNNK++YNIRGTF+V+ASLG +HYSYWL
Sbjct: 213 QRKREVRLQPVHLISSLVYLPQNSGFILRRQVQNNKVIYNIRGTFRVRASLGAIHYSYWL 272

Query: 265 HSRCELVMTSPPTGALVARSCRTKR 289
           HSRC+LVMTSPPTG LVARSC TKR
Sbjct: 273 HSRCQLVMTSPPTGVLVARSCNTKR 297

[Close]
BLAST of Carg24732 vs. NCBI nr
Match: XP_008447789.1 (PREDICTED: uncharacterized protein LOC103490177 [Cucumis melo])

HSP 1 Score: 434.5 bits (1116), Expect = 2.8e-118
Identity = 214/235 (91.06%), Postives = 226/235 (96.17%), Query Frame = 0 

Query: 54  REAELASLKQIVVQNRAMKPHSPLLNSNHIDSSKYSKPQLLQQARPRQTNPIIWCFAFLC 113
           REAELASL QI+VQNRA KPH+PLLN+NH DSSKY KPQLLQQARPRQTNPIIWCFAFLC
Sbjct: 57  REAELASLDQIIVQNRATKPHTPLLNTNHTDSSKYRKPQLLQQARPRQTNPIIWCFAFLC 116

Query: 114 LLFSLLLIFLGIATLIIFLVVRPRNPVFDIPNASLSTIYFDAPEYLNGDFTLLANFTNPN 173
           L FSLLLIFLGIATL+IFLVVRPRNP+FDIPNASLSTIYFDAPEYLNGDFT+LANFTNPN
Sbjct: 117 LAFSLLLIFLGIATLVIFLVVRPRNPLFDIPNASLSTIYFDAPEYLNGDFTILANFTNPN 176

Query: 174 QRVDVRYENADIELFFGDRLIATQAIQPFSQRKKEVRLQPVHLISSLVFLPQNFGLVLRR 233
            RVDVRYENADIELFFGDRLIATQAIQPFSQRK EVRLQPVHLISSLVFLPQNFGLVLRR
Sbjct: 177 HRVDVRYENADIELFFGDRLIATQAIQPFSQRKNEVRLQPVHLISSLVFLPQNFGLVLRR 236

Query: 234 QVQNNKIVYNIRGTFKVKASLGFVHYSYWLHSRCELVMTSPPTGALVARSCRTKR 289
           QVQNNKIVYNIRGTF+VKAS+G +HYS+WLHSRC+LVMTSPPTG LVARSC+TKR
Sbjct: 237 QVQNNKIVYNIRGTFRVKASVGIIHYSFWLHSRCQLVMTSPPTGILVARSCKTKR 291

[Close]
BLAST of Carg24732 vs. TAIR10
Match: AT4G26490.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 256.5 bits (654), Expect = 1.9e-68
Identity = 123/208 (59.13%), Postives = 156/208 (75.00%), Query Frame = 0 

Query: 81  NHIDSSKYSKPQLLQQARPRQTNPIIWCFAFLCLLFSLLLIFLGIATLIIFLVVRPRNPV 140
           N +D+       +L+Q R  +T+  IWC A  C +FSLLLIF  IATLI+FL +RPR PV
Sbjct: 61  NGLDAEPRKDRVILRQPRSSRTSLWIWCVAGFCFVFSLLLIFFAIATLIVFLAIRPRIPV 120

Query: 141 FDIPNASLSTIYFDAPEYLNGDFTLLANFTNPNQRVDVRYENADIELFFGDRLIATQAIQ 200
           FDIPNA+L TIYFD PE+ NGD ++L NFTNPN++++V++E   IELFF +RLIA Q +Q
Sbjct: 121 FDIPNANLHTIYFDTPEFFNGDLSMLVNFTNPNKKIEVKFEKLRIELFFFNRLIAAQVVQ 180

Query: 201 PFSQRKKEVRLQPVHLISSLVFLPQNFGLVLRRQVQNNKIVYNIRGTFKVKASLGFVHYS 260
           PF Q+K E RL+P+ LISSLV LP N  + LRRQ++NNKI Y IRGTFKVKA  G +HYS
Sbjct: 181 PFLQKKHETRLEPIRLISSLVGLPVNHAVELRRQLENNKIEYEIRGTFKVKAHFGMIHYS 240

Query: 261 YWLHSRCELVMTSPPTGALVARSCRTKR 289
           Y LH RC+L MT PPTG L++R+C TK+
Sbjct: 241 YQLHGRCQLQMTGPPTGILISRNCTTKK 268

[Close]
BLAST of Carg24732 vs. TAIR10
Match: AT5G56050.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 235.3 bits (599), Expect = 4.6e-62
Identity = 118/216 (54.63%), Postives = 154/216 (71.30%), Query Frame = 0 

Query: 73  PHSPLLNSNHIDSSKYSKPQLLQQARPRQTNPIIWCFAFLCLLFSLLLIFLGIATLIIFL 132
           P +P L+S  +++    +  +L Q R  +TNP IWC A LC +FS+LLI  GIATLI++L
Sbjct: 69  PATPKLDS--MEAHPLHETMVLLQLRTSRTNPWIWCGAALCFIFSILLIVFGIATLILYL 128

Query: 133 VVRPRNPVFDIPNASLSTIYFDAPEYLNGDFTLLANFTNPNQRVDVRYENADIELFFGDR 192
            V+PR PVFDI NA L+TI F++P Y NGD  L  NFTNPN++++VR+EN  +EL+F D 
Sbjct: 129 AVKPRTPVFDISNAKLNTILFESPVYFNGDMLLQLNFTNPNKKLNVRFENLMVELWFADT 188

Query: 193 LIATQAIQPFSQRKKEVRLQPVHLISSLVFLPQNFGLVLRRQVQNNKIVYNIRGTFKVKA 252
            IATQ + PFSQR  + RL+P+ LIS+LVFLP N  L LRRQV +N+I Y IR  F+VKA
Sbjct: 189 KIATQGVLPFSQRNGKTRLEPIRLISNLVFLPVNHILELRRQVTSNRIAYEIRSNFRVKA 248

Query: 253 SLGFVHYSYWLHSRCELVMTSPPTGALVARSCRTKR 289
             G +HYSY LH  C+L ++SPP G LV R+C TKR
Sbjct: 249 IFGMIHYSYMLHGICQLQLSSPPAGGLVYRNCTTKR 282

[Close]
BLAST of Carg24732 vs. TAIR10
Match: AT3G26350.1 (LOCATED IN: chloroplast)

HSP 1 Score: 153.3 bits (386), Expect = 2.3e-37
Identity = 80/190 (42.11%), Postives = 114/190 (60.00%), Query Frame = 0 

Query: 100 RQTNPIIWCFAFLCLLFSLLLIFLGIATLIIFLVVRPRNPVFDIPNASLSTIYFDAPEYL 159
           R+TN + W  AF C +F ++LI  G+  LI++LV RPR+P  DI  A+L+  Y D    L
Sbjct: 167 RETNAMTWSAAFCCAIFWVILILGGLIILIVYLVYRPRSPYVDISAANLNAAYLDMGFLL 226

Query: 160 NGDFTLLANFTNPNQRVDVRYENADIELFFGDRLIATQAIQPFSQRKKEVRLQPVHLISS 219
           NGD T+LAN TNP+++  V +     EL++ + LIATQ I+PF   KK      VHL+SS
Sbjct: 227 NGDLTILANVTNPSKKSSVEFSYVTFELYYYNTLIATQYIEPFKVPKKTSMFANVHLVSS 286

Query: 220 LVFLPQNFGLVLRRQVQNNKIVYNIRGTFKVKASLG-FVHYSYWLHSRCELVMTSPPTGA 279
            V L       L+RQ++   ++ N+RG F  ++ +G    YSY LH+ C + +  PP GA
Sbjct: 287 QVQLQATQSRELQRQIETGPVLLNLRGMFHARSHIGPLFRYSYKLHTHCSVSLNGPPLGA 346

Query: 280 LVARSCRTKR 289
           + AR C TKR
Sbjct: 347 MRARRCNTKR 356

[Close]
BLAST of Carg24732 vs. TAIR10
Match: AT1G13050.1 (unknown protein)

HSP 1 Score: 130.6 bits (327), Expect = 1.6e-30
Identity = 70/194 (36.08%), Postives = 107/194 (55.15%), Query Frame = 0 

Query: 96  QARPRQTNPIIWCFAFLCLLFSLLLIFLGIATLIIFLVVRPRNPVFDIPNASLSTIYFDA 155
           Q  P++T P+       C          G+  L+++L  RPR+P FDI  A+L+T   D 
Sbjct: 124 QQGPKRTKPMTLPATICCXXXXXXXXXSGLILLLVYLANRPRSPYFDISAATLNTANLDM 183

Query: 156 PEYLNGDFTLLANFTNPNQRVDVRYENADIELFFGDRLIATQAIQPFSQRKKEVRLQPVH 215
              LNGD  ++ NFTNP+++  V +     EL+F + LIAT+ I+PF   K        H
Sbjct: 184 GYVLNGDLAVVVNFTNPSKKSSVDFSYVMFELYFYNTLIATEHIEPFIVPKGMSMFTSFH 243

Query: 216 LISSLVFLPQNFGLVLRRQVQNNKIVYNIRGTFKVKASLG-FVHYSYWLHSRCELVMTSP 275
           L+SS V +       L+ Q+    ++ N+RGTF  +++LG  + YSYWLH++C + + +P
Sbjct: 244 LVSSQVQIQMIQSQDLQLQLGTGPVLLNLRGTFHARSNLGSLMRYSYWLHTQCSISLNTP 303

Query: 276 PTGALVARSCRTKR 289
           P G + AR C TKR
Sbjct: 304 PAGTMRARRCNTKR 317

[Close]
BLAST of Carg24732 vs. TAIR10
Match: AT5G22870.1 (Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family)

HSP 1 Score: 59.7 bits (143), Expect = 3.4e-09
Identity = 42/165 (25.45%), Postives = 77/165 (46.67%), Query Frame = 0 

Query: 91  PQLLQQARPRQTNPIIWCFAFLCLLFSLLLIFLGIATLIIFLVVRPRNPVFDIPNASLST 150
           P     A+P +  P + C+ FL +L   L+    +  LI +L  +P+   + + NAS+  
Sbjct: 11  PMETSPAQPLR-RPSLICYIFLVIL--TLIFMAAVGFLITWLETKPKKLRYTVENASVQN 70

Query: 151 IYFDAPEYLNGDFTLLANFTNPNQRVDVRYENADIELFFGDRLIATQAIQPFSQRKKEVR 210
                  +++  F       NPN R+ V Y + +I + F D+ +A   ++PF Q +  V+
Sbjct: 71  FNLTNDNHMSATFQFTIQSHNPNHRISVYYSSVEIFVKFKDQTLAFDTVEPFHQPRMNVK 130

Query: 211 LQPVHLISSLVFLPQNFGLVLRRQVQNNKIVYNIRGTFKVKASLG 256
                LI+  V + ++ G  LR Q    KI + +    +V+  +G
Sbjct: 131 QIDETLIAENVAVSKSNGKDLRSQNSLGKIGFEVFVKARVRFKVG 172

[Close]
BLAST of Carg24732 vs. Swiss-Prot
Match: sp|Q9SJ52|NHL10_ARATH (NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 3.4e-06
Identity = 43/148 (29.05%), Postives = 69/148 (46.62%), Query Frame = 0 

Query: 113 CLLFSL-------LLIFLGIATLIIFLVVRPRNPVFDIPNASLSTIYFDAPE-YLNGDFT 172
           C L SL       L++ LG+A LI +L+VRPR   F + +ASL+     +P+  L  +  
Sbjct: 35  CCLLSLFVKVIISLIVILGVAALIFWLIVRPRAIKFHVTDASLTRFDHTSPDNILRYNLA 94

Query: 173 LLANFTNPNQRVDVRYENADIELFFGDRLIATQAIQPFSQ-RKKEVRLQPVHLISSLVFL 232
           L     NPN+R+ + Y+  +   ++  +  +T  + PF Q  K    L P     +LV  
Sbjct: 95  LTVPVRNPNKRIGLYYDRIEAHAYYEGKRFSTITLTPFYQGHKNTTVLTPTFQGQNLVIF 154

Query: 233 PQNFGLVLRRQVQNNKIVYNIRGTFKVK 252
             N G       +    VYNI   F+++
Sbjct: 155 --NAGQSRTLNAERISGVYNIEIKFRLR 180

[Close]
BLAST of Carg24732 vs. Swiss-Prot
Match: sp|Q9ZVD2|NHL13_ARATH (NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 4.4e-06
Identity = 43/183 (23.50%), Postives = 89/183 (48.63%), Query Frame = 0 

Query: 108 CF-AFLCLLFSLLLIFLGIATLIIFLVVRPRNPVFDIPNASLSTIYFDAPEYLNGDFTLL 167
           CF +FL  +F +L++  GI+  +++L+ RP  P + I   S+S I  ++   ++  F + 
Sbjct: 74  CFCSFLAAVF-ILIVLAGISFAVLYLIYRPEAPKYSIEGFSVSGINLNSTSPISPSFNVT 133

Query: 168 ANFTNPNQRVDVRYE-NADIELFFGDRLIATQAIQPFSQRKKEVRLQPVHLISSLVFLPQ 227
               N N ++ V YE  + +++++ D  I+   +  F Q  K V +  + L  S + L  
Sbjct: 134 VRSRNGNGKIGVYYEKESSVDVYYNDVDISNGVMPVFYQPAKNVTVVKLVLSGSKIQLTS 193

Query: 228 NFGLVLRRQVQNNKIVYNIRGTFKVKASLGFVH-YSYWLHSRCELV---MTSPPTGALVA 285
                +R +V    + + ++    VK   G V  ++  ++  C++    +T+P    +V+
Sbjct: 194 GMRKEMRNEVSKKTVPFKLKIKAPVKIKFGSVKTWTMIVNVDCDVTVDKLTAP--SRIVS 253

[Close]
BLAST of Carg24732 vs. Swiss-Prot
Match: sp|Q9FNH6|NHL3_ARATH (NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 1.4e-04
Identity = 44/162 (27.16%), Postives = 66/162 (40.74%), Query Frame = 0 

Query: 126 ATLIIFLVVRPRNPVFDIPNASLSTIYFDAPEYLNGDFTLLANFTNPNQRVDVRYENADI 185
           A LII+L+ RP    F + +A L+    D    L  +  L     NPN+R+ V Y+  ++
Sbjct: 62  AALIIWLIFRPNAIKFHVTDAKLTEFTLDPTNNLRYNLDLNFTIRNPNRRIGVYYDEIEV 121

Query: 186 ELFFGD-RLIATQAIQPFSQRKKEVRLQPVHLI-SSLVFLPQNFGLVLRRQVQNNKIVYN 245
             ++GD R   +  I  F Q  K   +    L+   LV L       L   V  N  +Y 
Sbjct: 122 RGYYGDQRFGMSNNISKFYQGHKNTTVVGTKLVGQQLVLLDGGERKDLNEDV--NSQIYR 181

Query: 246 IRGTFKVKASLGFVHYSYWLHS---RCEL--VMTSPPTGALV 281
           I    ++K    F     W      +C+L   +TS  T   V
Sbjct: 182 IDAKLRLKIRFKFGLIKSWRFKPKIKCDLKVPLTSNSTSGFV 221

[Close]
BLAST of Carg24732 vs. TrEMBL
Match: tr|A0A1S3BHM7|A0A1S3BHM7_CUCME (uncharacterized protein LOC103490177 OS=Cucumis melo OX=3656 GN=LOC103490177 PE=4 SV=1)

HSP 1 Score: 434.5 bits (1116), Expect = 1.9e-118
Identity = 214/235 (91.06%), Postives = 226/235 (96.17%), Query Frame = 0 

Query: 54  REAELASLKQIVVQNRAMKPHSPLLNSNHIDSSKYSKPQLLQQARPRQTNPIIWCFAFLC 113
           REAELASL QI+VQNRA KPH+PLLN+NH DSSKY KPQLLQQARPRQTNPIIWCFAFLC
Sbjct: 57  REAELASLDQIIVQNRATKPHTPLLNTNHTDSSKYRKPQLLQQARPRQTNPIIWCFAFLC 116

Query: 114 LLFSLLLIFLGIATLIIFLVVRPRNPVFDIPNASLSTIYFDAPEYLNGDFTLLANFTNPN 173
           L FSLLLIFLGIATL+IFLVVRPRNP+FDIPNASLSTIYFDAPEYLNGDFT+LANFTNPN
Sbjct: 117 LAFSLLLIFLGIATLVIFLVVRPRNPLFDIPNASLSTIYFDAPEYLNGDFTILANFTNPN 176

Query: 174 QRVDVRYENADIELFFGDRLIATQAIQPFSQRKKEVRLQPVHLISSLVFLPQNFGLVLRR 233
            RVDVRYENADIELFFGDRLIATQAIQPFSQRK EVRLQPVHLISSLVFLPQNFGLVLRR
Sbjct: 177 HRVDVRYENADIELFFGDRLIATQAIQPFSQRKNEVRLQPVHLISSLVFLPQNFGLVLRR 236

Query: 234 QVQNNKIVYNIRGTFKVKASLGFVHYSYWLHSRCELVMTSPPTGALVARSCRTKR 289
           QVQNNKIVYNIRGTF+VKAS+G +HYS+WLHSRC+LVMTSPPTG LVARSC+TKR
Sbjct: 237 QVQNNKIVYNIRGTFRVKASVGIIHYSFWLHSRCQLVMTSPPTGILVARSCKTKR 291

[Close]
BLAST of Carg24732 vs. TrEMBL
Match: tr|A0A0A0K372|A0A0A0K372_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G193750 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 1.2e-117
Identity = 211/235 (89.79%), Postives = 225/235 (95.74%), Query Frame = 0 

Query: 54  REAELASLKQIVVQNRAMKPHSPLLNSNHIDSSKYSKPQLLQQARPRQTNPIIWCFAFLC 113
           REAELASL QI+VQNRA KPH+PLLN+NH DSSKY KPQLLQQARPRQTNPIIWCFAFLC
Sbjct: 57  REAELASLDQIIVQNRATKPHTPLLNTNHTDSSKYRKPQLLQQARPRQTNPIIWCFAFLC 116

Query: 114 LLFSLLLIFLGIATLIIFLVVRPRNPVFDIPNASLSTIYFDAPEYLNGDFTLLANFTNPN 173
           L FSLLLIFLGIATLIIFLV+RPRNP+FDIPNASLSTIYFDAPEYLNGDFT+LANFTNPN
Sbjct: 117 LAFSLLLIFLGIATLIIFLVIRPRNPLFDIPNASLSTIYFDAPEYLNGDFTILANFTNPN 176

Query: 174 QRVDVRYENADIELFFGDRLIATQAIQPFSQRKKEVRLQPVHLISSLVFLPQNFGLVLRR 233
            RVDVRYENADIELFFGDRLIATQAIQPFSQRK E+RLQPVHL SSLVFLPQNFGLVLRR
Sbjct: 177 HRVDVRYENADIELFFGDRLIATQAIQPFSQRKNEIRLQPVHLTSSLVFLPQNFGLVLRR 236

Query: 234 QVQNNKIVYNIRGTFKVKASLGFVHYSYWLHSRCELVMTSPPTGALVARSCRTKR 289
           QVQNNK+VYNIRGTF+VKAS+G +HYS+WLHSRC+LVMTSPPTG LVARSC+TKR
Sbjct: 237 QVQNNKVVYNIRGTFRVKASVGIIHYSFWLHSRCQLVMTSPPTGILVARSCKTKR 291

[Close]
BLAST of Carg24732 vs. TrEMBL
Match: tr|U5FWZ7|U5FWZ7_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_011G165500v3 PE=4 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 1.0e-84
Identity = 148/229 (64.63%), Postives = 189/229 (82.53%), Query Frame = 0 

Query: 60  SLKQIVVQNRAMKPHSPLLNSNHIDSSKYSKPQLLQQARPRQTNPIIWCFAFLCLLFSLL 119
           SL QIV+  +A  P S    +++ DS K SKP + +  RPR+TNP+IWC A LCL+FSL+
Sbjct: 28  SLNQIVISKQARNPQSSSAETSNSDSKKLSKPPIFKHPRPRRTNPVIWCGAILCLIFSLV 87

Query: 120 LIFLGIATLIIFLVVRPRNPVFDIPNASLSTIYFDAPEYLNGDFTLLANFTNPNQRVDVR 179
           LI  GIATLII+LV++PRNPVFDIPNA+L+++YFD+PEY NGD T LANF+NPN+++DVR
Sbjct: 88  LIIFGIATLIIYLVIKPRNPVFDIPNANLNSVYFDSPEYFNGDLTFLANFSNPNRKIDVR 147

Query: 180 YENADIELFFGDRLIATQAIQPFSQRKKEVRLQPVHLISSLVFLPQNFGLVLRRQVQNNK 239
           +E  DIEL+F DRLI TQA+QPF+QR +E RL+ VH+ISSLV+LPQN  + L+RQVQ+NK
Sbjct: 148 FEYVDIELYFSDRLIGTQALQPFTQRSRETRLESVHIISSLVYLPQNLAVELQRQVQSNK 207

Query: 240 IVYNIRGTFKVKASLGFVHYSYWLHSRCELVMTSPPTGALVARSCRTKR 289
           + YNIRGTFKV+A++G +HYSYWLH RCE+ MT PPTG +VARSCRTKR
Sbjct: 208 VNYNIRGTFKVRANMGLLHYSYWLHGRCEIEMTGPPTGVIVARSCRTKR 256

[Close]
BLAST of Carg24732 vs. TrEMBL
Match: tr|A0A2I4E2S1|A0A2I4E2S1_9ROSI (uncharacterized protein At1g08160 OS=Juglans regia OX=51240 GN=LOC108985729 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 2.7e-77
Identity = 141/229 (61.57%), Postives = 182/229 (79.48%), Query Frame = 0 

Query: 60  SLKQIVVQNRAMKPHSPLLNSNHIDSSKYSKPQLLQQARPRQTNPIIWCFAFLCLLFSLL 119
           SL +IV+  + +   +     ++ D  K  +   L + RPR+TNP IWC + LCLLFSL+
Sbjct: 28  SLDEIVISKQTVNHQNRPPEKSNSDLKKSREISTLLKPRPRRTNPFIWCSSILCLLFSLI 87

Query: 120 LIFLGIATLIIFLVVRPRNPVFDIPNASLSTIYFDAPEYLNGDFTLLANFTNPNQRVDVR 179
           LIF GIATLIIFLVV+PRNP FDIPNA+LS IYFD+PEY NGD+T LANF+NPN+++DVR
Sbjct: 88  LIFFGIATLIIFLVVKPRNPSFDIPNANLSVIYFDSPEYFNGDYTFLANFSNPNRKIDVR 147

Query: 180 YENADIELFFGDRLIATQAIQPFSQRKKEVRLQPVHLISSLVFLPQNFGLVLRRQVQNNK 239
            EN  IELFF +RLIATQA+QPF+QR+ E RL+ VH +SSLVFLPQN  + L++QVQ+N+
Sbjct: 148 LENLVIELFFSERLIATQAVQPFTQRRGETRLESVHFLSSLVFLPQNLAVELQKQVQSNR 207

Query: 240 IVYNIRGTFKVKASLGFVHYSYWLHSRCELVMTSPPTGALVARSCRTKR 289
           + Y++RG +KVKA+LG +HYSYWLH+RC + MTSPPTG LVAR+C+TKR
Sbjct: 208 VSYSVRGKYKVKATLGLIHYSYWLHTRCRVEMTSPPTGVLVARNCKTKR 256

[Close]
BLAST of Carg24732 vs. TrEMBL
Match: tr|A0A2P5CGN9|A0A2P5CGN9_9ROSA (Late embryogenesis abundant protein OS=Trema orientalis OX=63057 GN=TorRG33x02_285460 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.4e-76
Identity = 146/231 (63.20%), Postives = 184/231 (79.65%), Query Frame = 0 

Query: 60  SLKQIVVQNRAM--KPHSPLLNSNHIDSSKYSKPQLLQQARPRQTNPIIWCFAFLCLLFS 119
           SL QIV+  +A+  +  +P   +NH  +S   K  +L Q  PR+TNP+IW  A +CL+FS
Sbjct: 53  SLNQIVISKQAVNSENRAPKTPNNHTKTS--VKQPILLQTEPRRTNPLIWFGAVVCLVFS 112

Query: 120 LLLIFLGIATLIIFLVVRPRNPVFDIPNASLSTIYFDAPEYLNGDFTLLANFTNPNQRVD 179
           LLLIF GIATLIIFLVV+PR PVFD PNA L+TIYFD+PEY NGDF  LANF+NPN+++D
Sbjct: 113 LLLIFFGIATLIIFLVVKPRTPVFDTPNARLNTIYFDSPEYFNGDFAFLANFSNPNRKLD 172

Query: 180 VRYENADIELFFGDRLIATQAIQPFSQRKKEVRLQPVHLISSLVFLPQNFGLVLRRQVQN 239
           VR+E  DIEL+F DRLI+TQ +QPF+QR  E+RL+ VHLISSLV+LPQN  + LR QVQ+
Sbjct: 173 VRFEYVDIELYFADRLISTQTLQPFTQRPGEIRLEAVHLISSLVYLPQNHAVELRTQVQS 232

Query: 240 NKIVYNIRGTFKVKASLGFVHYSYWLHSRCELVMTSPPTGALVARSCRTKR 289
           N++ YNIRGTFKV+A+LG +H ++WLHSRC+L MT PPTG LVAR+CRTKR
Sbjct: 233 NRVNYNIRGTFKVRATLGMIHVTFWLHSRCQLQMTGPPTGILVARNCRTKR 281

The following BLAST results are available for this feature:
BLAST of Carg24732 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022936034.11.2e-14897.22uncharacterized protein LOC111442755 [Cucurbita moschata][more]
XP_022976037.13.0e-14498.19uncharacterized protein LOC111476559 [Cucurbita maxima][more]
XP_023535843.16.3e-14297.83uncharacterized protein LOC111797152 [Cucurbita pepo subsp. pepo][more]
XP_023523222.17.4e-11984.15uncharacterized protein LOC111787482 [Cucurbita pepo subsp. pepo][more]
XP_008447789.12.8e-11891.06PREDICTED: uncharacterized protein LOC103490177 [Cucumis melo][more]
BLAST of Carg24732 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G26490.11.9e-6859.13Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family[more]
AT5G56050.14.6e-6254.63FUNCTIONS IN: molecular_function unknown[more]
AT3G26350.12.3e-3742.11LOCATED IN: chloroplast[more]
AT1G13050.11.6e-3036.08unknown protein[more]
AT5G22870.13.4e-0925.45Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family[more]
BLAST of Carg24732 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SJ52|NHL10_ARATH3.4e-0629.05NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=NHL10 PE=2 SV=1[more]
sp|Q9ZVD2|NHL13_ARATH4.4e-0623.50NDR1/HIN1-like protein 13 OS=Arabidopsis thaliana OX=3702 GN=NHL13 PE=2 SV=1[more]
sp|Q9FNH6|NHL3_ARATH1.4e-0427.16NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=NHL3 PE=1 SV=1[more]
BLAST of Carg24732 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BHM7|A0A1S3BHM7_CUCME1.9e-11891.06uncharacterized protein LOC103490177 OS=Cucumis melo OX=3656 GN=LOC103490177 PE=... [more]
tr|A0A0A0K372|A0A0A0K372_CUCSA1.2e-11789.79Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G193750 PE=4 SV=1[more]
tr|U5FWZ7|U5FWZ7_POPTR1.0e-8464.63Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_011G165500v3 PE=... [more]
tr|A0A2I4E2S1|A0A2I4E2S1_9ROSI2.7e-7761.57uncharacterized protein At1g08160 OS=Juglans regia OX=51240 GN=LOC108985729 PE=4... [more]
tr|A0A2P5CGN9|A0A2P5CGN9_9ROSA1.4e-7663.20Late embryogenesis abundant protein OS=Trema orientalis OX=63057 GN=TorRG33x02_2... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004864LEA_2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24732-RACarg24732-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004864Late embryogenesis abundant protein, LEA_2 subgroupPFAMPF03168LEA_2coord: 170..258
e-value: 1.5E-8
score: 35.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..16
NoneNo IPR availablePANTHERPTHR31852:SF60SUBFAMILY NOT NAMEDcoord: 46..288
NoneNo IPR availablePANTHERPTHR31852FAMILY NOT NAMEDcoord: 46..288