Carg24708 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAGAGTAAAAACAAAATCCCACGAAGAAGACACATCTGTAATTTGCCGTTCGGGTCCAGAAGTATGGCGAGTGATCAATCTCCGCCAAGACCGGGTGAAGACGCGCATGAAGATGAGCAGAAGGGCTCGAGCTCGGTGAAGGGAAAAGCTATGGCGGGAAAGACCTTGGGGTGGGTTTTGGCTCTTATAGTGGCTGTCGTTGCGCTTTTTGTCGGGTTTTCCTTCAAATCCCGATATCCGATCGCCCCTTCCTTCCCTTCCCCTCAACTGGTACGAGTTTCTTCTTGATAATTATGCTTGTATTATAGTTTCGGAAGACATTTTTCTATTTTCTGTTGGAATTGGAAGGAATTTTCGGAGTATTAATTATTGGATAGCAGCTTTTGTGACTTGTTAGAACTGCGTTTATGATTATCGAGCTGTTTAAGATCTTTTGTTCGTCTTACATGGGCGAGTTTTTGATATGCTACATAATGCTATGAAAAAAGGATTAAAGATTGAAAGCGAGAGAGCTACACGCTGTGTGGCTACAATTTCAAATCGAGGGAAAGATGATGGCCTTTGGTTAAATGCTTTGAGACGGTGTTCTTAGTGTGCCACTGCTAGCTGATATTGTCCTCTTTGGGCTTTCCGTTCTGGGCTTCCTCTTAAGGTTTTAAAACGTGTTTACTAGGGAGAGGTTTCAACACCCTTATAAAGAATGCTTCGTTCCTCTCTCCAACTGATGTGAGATCTCAAATTTTTTATCTCTGTAGCGTAATGGTGGATTGTTTCTAGTCGGGGTTTTGGGATCTTGTGATTAGAGCTTGATTATGGGAGAACTCTACTTGGGTCCTTTTGGTTAAATAAGTGTTATCAAGGATTCCTACGTACATTTCTGTCTTTATTATCCTTCTTTAAGTTGTTAAATTGATTGAAAGAAGATTGGCAACATGTGATCTTGGCTTTGAAGTGGGTGTAACATGAAATGGACTCTTTATCAGAGAGGTTTAGTTAATTTCTAATTGATTTAAGTTGGCAGAGTTTTATACTTTTATTTCAAGTTCTTGTTTGCTTTTGTAGAAACTCTTCAAAGTTGATGAGCTAGCTTTGTATAATGGAACTGATGAGGGATTGCCTATCCTTCTTGGAATTCTTGGGTACTCTCCACCTCCCTCCCAACCCACCTCCAAATTTTATCTATGTTTTTCTCAGTTAAATTTGTTTAATCATTACAATTTATGAGAGAATGTAGAAAATGGATAAAGAAAATCATGATAGTTCATAGCGTTGAACGACTGAGCTGCATATCTCAATTCTTTCTTGTTGACATTCTTTTGAAATTATATCATTATTCTGCCACACATGGAAAAACAAAATGTCTTGGATTAAACATCAATAACCGACAACATATAGGAATGCATGCCCGTTGTAATACGGTTAAGCAAAGGGGTCATTTCGTGGAAGTCGATCCCTTGCTATTTATTTAACCTCTAACAATTCTATTTTTTTCAGATCAGTCTTTGATGTCACAAAAGGAAAATCTCACTATGGTGTGGGAGGAGGTTATCATCACTTTTCGGGAAGGTTTGTGATTGATTTTTTCCTTGTTGATCTCCTAGGCAACAAATCCAAATTTGATAAGAATAAATTTTAAAATTCCTATATGGCAGCATTTGTTCTATCAATGGTTCAAATTGTCATAGTTCTTTTTCTTCATGTATTTGTGTTTGTCTTTTGTGGCTATTGAATCAATAGATTATCTTAATGAGTCATTTTCTTTCTTCTTTATTTTCCATCTAGAACAGTCTGGAAGCCTGAAAACATTAATTTTCAATTTAAATGTTCATAGTTCCTTACTGATCCAATTATATTTGGTTACTTTTTAACGAGACCTTGATTTTCGATTGCCACTTTTCTTTGAGTTTTGCGATATACTTTAGCAGTAACGTTCTGATATTTTCTTCTTTCATGGTTGTTTTTAAAACAGAGATGCTTCTCGTGCATTCGTATCAGGAAACTTCACAGGTATTTATGGTTTCTTGTTGGGGCGCTTTAAAATATTTTCCGTCAGTTTCTAGCTATAACTTTGTGTACGTAGTATAACAGACATTTGAGTGTTCTACAGATATAGTGAAACTTTTGTTTTCTTTGGGCTGCCAATTTGAATCAATTTCTGACCAATGCTTGCTTTTCGTTTCTACATTGTGAATGGAGTGCCTAAAATTAGGCTTTTTTTTAAGGTGGAGGATGTATATCCTCAATTAACTATTGTATTAAAGTGTCGTCATCCTAATTATGTCTTCGTATGGAAAACGTGCGAAAACGGTAATTTGACTATTACTCAACAATAAATATGTATTGTGAGATTCCACATCGGTTGGTGAGGGGAACGAAACATTGCTTATAAGGGTGTGGAACCCTCTCCCTAACCGATGCGTTTTAAAACCTTAAGGGGAAGTTTAGAAGTGAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGGCTTGGGCTCTTACAATTGGTATCAAAGCCAGACACCGAGCTGTGTGCCAGCGAGGACGCTAGGCTTCCAAGGGGGGTGGATTGGGAGATCCCACATCAGTTGGAGAAGGGAACGAAACATTCCTTATAAGGGTGTGGAAACTTCTCTCTAACAGACGCGTTTTAAAACCTTGAGGGGAAGCCCAAAGAGGACAATATCTGCTAGCGGTGAGCTTGGATGATTACAAATGGTATCAGAGCCAGACACCGGGCGGTGTGCCAACAAGGATGCTGGGCTTCCAAGGGGGTGGATTGTGAGATCCCACATCAGTTGGAGAGGGGAACAAAGCCTTCCTTATAAGGATGTGGAAACCTCTCCCTAACCGACGCGTTTTAAAACTCTGAGGGGAAGTCCATAAGGGAAAGTCCAAAGAGGACAATATCTGCTAGCAGTGGGCTTGAGCTAGGACGGTTACATGTACTAAATCACATGTCCATTTCTATTTCTTTTTCATTGAGGGTGAGGAGAGGAAGAATGGTAGAGAGTGGTTAGGAACAAGAACTAAGAAAAAAAGAAGAAGAAAAATGTTTCATATGTCCCATTACCTAAACATCTTTCAAGTATCAATTGAATTCTATCATTTGTTATTGTTATAGGGGAAGGACTCACTGATTCCTTGCGGGGCTTGTCAAATGCTGAGGTACTCTTAATTGCTTACTTAAATTGTCACTATGGTCAAGGGATTGTCCTTAAATATGCAATGTTGTTGCTTATTATTCGTCTTCTCATTCTTTAACTTTGTAGAACTTCTGCCCCTCCAAACCCGTTCTTTCCCCGTCTTTGGTATATAGACACTGCTCTCTCAAGGTTTATATATCTGACTGTTGTACTAACTAATCTTGTAGATCAAGAGCGTTGTTGAATGGCGGGGCTTTTACCATAAATCCTACACGTAAGTTGGCTGCAGTAGCATCTGTTATCTTAAATGATATGCGATGACAATTGTTGCAACTTGCAAATGTCGTGCGTGTTCGTTCGAGCATGAAAATTTGATTAATTGATAGAAGACGTTAGATTTGAGAATGATGTGATATTATTGGAATAAATGCTGAAGGATAATGTTCTTGGCCTTCGCCAGATTTGTAGGTAAGTTGGTGGGTCTTTACTATGATGATCAAGGAAATCCCACTAAGCATTTAAAGGGAACTGAGGCAAAGGCTGCCAGAGGCGCACAACTTTTGAAGAAACAAAAGAAAGAGGAGGATAAACTGCCAAGCTGTAATTCGAAATGGAGTCAGGATGAAGGTGGTGAGGTATATTCTTCAATGTAGTCGTGTTATTTTCCAATCAGATTCTATATTTACTCGTTAGGACAGTATTTAGGTGTGAGATCCCACATCGGTTGGAGAGGGGAACAAAGCATTCCTTATATGGGTGTGGAAACCTTTCTAGTAGACGTGTTGTAAAACCGTGAGGTTGACGGTGATACGTAACGGGCCAAAGCGGACAATATCTGCTTGCGGTGTGCTTGGGCTGTTACAAATGGTATTAGAGCCAAACACCAGGCGGTGTGCCAGTGAGGATGCTGGGCCCCTAAGGAGGGTGGATTGTGAGATCCCACATCGGTTAGAAAGGGGAACAAAGCATTCCTTATATGAGTGTGGAAACCTTTCCCTTGTAGATGCGTTGTAAAACTGTGAGGTTGACGGCGATACGTAACGGGCCAAAGCGGACAATATCCGAATATCCGCTTGCGGTGTGCTTGGGCTATTACAAATGGTATCAGAGTCAAACACCGGGCAGTGTGTCAGCGAGGATGTTGGGCCCCTAAGGAGGGTCGATTGTGAGATCCCACATCGGTTGGAGAAGAGAACAAAGCATTCGATATATGGGTGTGGAAACCTCTCCCTAGTAGACGCGTTTTAAAACCGTGGGACTGTCGACGATACGTAATGGGCCAAAGCGAACAATATCTTTTAGCGGTGGGCTTGGGCTGTTACAAATAGTATCAGAGTCATACACCAGGAAGTGTGCCAGCGAGGATGCTGGCCCCCAAGGGGGTGGATCTAGATCCCACGTCGGTTGAAGAGGGGGAAAACATTCCTCATATAGAAGCTTGGTTTTTTAGGCTAATTCACACAGAATAAACTTCATATTGTGATCTCTTTTTAACCCATCTTTAGGTCTGGTGCGATAATGGCTTCCCGAGATTGATACAGAGACCATTAGAAATCGCGTTGACAGGGAAGATGAGCAAACGATGCGCTTGCTTTCGAGAAGACCAGCTGGGAGAGCCAGGATTAGAAGTTTATGAAGGTTGTGACTACCAAGCGAAGACCTGCCGTGTTTAAAGACCCGTTACAAACAGCCTTAGCTCGTTAGTCGACATATAACCTTCTCATACATCGGAAACCACTTCATTATAGTTATCATCCATAAACCAGAGGGGGTGAAACCTGCAACGAGATTGACCGAAATGGCCGATAGATACACAGAAACACGACACACCAAACGTTCCATTCTTCGTTTTTTTTTTCCTCTTCCTTAGGAAGGATGCGGGAGACAGGGAGTATCGACCGCGTACAGGTACGTGATTATCTGTTTCACGACATAATACTGTTCATTGATCATATCATCAGCTTCAGTTGCTTGCCTGCTTTCTAGACCTGTGTTTTGATGTATTTTGATGTGAGTTGTATGTTTTGGCCTCTTTTAGATTCATCAGCTGCAAGACATGAACAGACAAACCTTGTCTCTCAATTATTGA AAGAGTAAAAACAAAATCCCACGAAGAAGACACATCTGTAATTTGCCGTTCGGGTCCAGAAGTATGGCGAGTGATCAATCTCCGCCAAGACCGGGTGAAGACGCGCATGAAGATGAGCAGAAGGGCTCGAGCTCGGTGAAGGGAAAAGCTATGGCGGGAAAGACCTTGGGGTGGGTTTTGGCTCTTATAGTGGCTGTCGTTGCGCTTTTTGTCGGGTTTTCCTTCAAATCCCGATATCCGATCGCCCCTTCCTTCCCTTCCCCTCAACTGAAACTCTTCAAAGTTGATGAGCTAGCTTTGTATAATGGAACTGATGAGGGATTGCCTATCCTTCTTGGAATTCTTGGATCAGTCTTTGATGTCACAAAAGGAAAATCTCACTATGGTGTGGGAGGAGGTTATCATCACTTTTCGGGAAGAGATGCTTCTCGTGCATTCGTATCAGGAAACTTCACAGGGGAAGGACTCACTGATTCCTTGCGGGGCTTGTCAAATGCTGAGATCAAGAGCGTTGTTGAATGGCGGGGCTTTTACCATAAATCCTACACATTTGTAGGTAAGTTGGTGGGTCTTTACTATGATGATCAAGGAAATCCCACTAAGCATTTAAAGGGAACTGAGGCAAAGGCTGCCAGAGGCGCACAACTTTTGAAGAAACAAAAGAAAGAGGAGGATAAACTGCCAAGCTGTAATTCGAAATGGAGTCAGGATGAAGGTGGTGAGGTCTGGTGCGATAATGGCTTCCCGAGATTGATACAGAGACCATTAGAAATCGCGTTGACAGGGAAGATGAGCAAACGATGCGCTTGCTTTCGAGAAGACCAGCTGGGAGAGCCAGGATTAGAAGTTTATGAAGGAAGGATGCGGGAGACAGGGAGTATCGACCGCGTACAGATTCATCAGCTGCAAGACATGAACAGACAAACCTTGTCTCTCAATTATTGA ATGGCGAGTGATCAATCTCCGCCAAGACCGGGTGAAGACGCGCATGAAGATGAGCAGAAGGGCTCGAGCTCGGTGAAGGGAAAAGCTATGGCGGGAAAGACCTTGGGGTGGGTTTTGGCTCTTATAGTGGCTGTCGTTGCGCTTTTTGTCGGGTTTTCCTTCAAATCCCGATATCCGATCGCCCCTTCCTTCCCTTCCCCTCAACTGAAACTCTTCAAAGTTGATGAGCTAGCTTTGTATAATGGAACTGATGAGGGATTGCCTATCCTTCTTGGAATTCTTGGATCAGTCTTTGATGTCACAAAAGGAAAATCTCACTATGGTGTGGGAGGAGGTTATCATCACTTTTCGGGAAGAGATGCTTCTCGTGCATTCGTATCAGGAAACTTCACAGGGGAAGGACTCACTGATTCCTTGCGGGGCTTGTCAAATGCTGAGATCAAGAGCGTTGTTGAATGGCGGGGCTTTTACCATAAATCCTACACATTTGTAGGTAAGTTGGTGGGTCTTTACTATGATGATCAAGGAAATCCCACTAAGCATTTAAAGGGAACTGAGGCAAAGGCTGCCAGAGGCGCACAACTTTTGAAGAAACAAAAGAAAGAGGAGGATAAACTGCCAAGCTGTAATTCGAAATGGAGTCAGGATGAAGGTGGTGAGGTCTGGTGCGATAATGGCTTCCCGAGATTGATACAGAGACCATTAGAAATCGCGTTGACAGGGAAGATGAGCAAACGATGCGCTTGCTTTCGAGAAGACCAGCTGGGAGAGCCAGGATTAGAAGTTTATGAAGGAAGGATGCGGGAGACAGGGAGTATCGACCGCGTACAGATTCATCAGCTGCAAGACATGAACAGACAAACCTTGTCTCTCAATTATTGA MASDQSPPRPGEDAHEDEQKGSSSVKGKAMAGKTLGWVLALIVAVVALFVGFSFKSRYPIAPSFPSPQLKLFKVDELALYNGTDEGLPILLGILGSVFDVTKGKSHYGVGGGYHHFSGRDASRAFVSGNFTGEGLTDSLRGLSNAEIKSVVEWRGFYHKSYTFVGKLVGLYYDDQGNPTKHLKGTEAKAARGAQLLKKQKKEEDKLPSCNSKWSQDEGGEVWCDNGFPRLIQRPLEIALTGKMSKRCACFREDQLGEPGLEVYEGRMRETGSIDRVQIHQLQDMNRQTLSLNY
BLAST of Carg24708 vs. NCBI nr
Match: XP_022940087.1 (membrane-associated progesterone-binding protein 4 [Cucurbita moschata]) HSP 1 Score: 532.7 bits (1371), Expect = 7.8e-148 Identity = 262/265 (98.87%), Postives = 262/265 (98.87%), Query Frame = 0
BLAST of Carg24708 vs. NCBI nr
Match: XP_023524767.1 (membrane-associated progesterone-binding protein 4 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 531.6 bits (1368), Expect = 1.7e-147 Identity = 262/265 (98.87%), Postives = 262/265 (98.87%), Query Frame = 0
BLAST of Carg24708 vs. NCBI nr
Match: XP_022981227.1 (membrane-associated progesterone-binding protein 4 [Cucurbita maxima]) HSP 1 Score: 528.9 bits (1361), Expect = 1.1e-146 Identity = 260/265 (98.11%), Postives = 261/265 (98.49%), Query Frame = 0
BLAST of Carg24708 vs. NCBI nr
Match: XP_004149524.1 (PREDICTED: membrane-associated progesterone-binding protein 4 [Cucumis sativus] >KGN54965.1 hypothetical protein Csa_4G617330 [Cucumis sativus]) HSP 1 Score: 453.4 bits (1165), Expect = 6.0e-124 Identity = 225/265 (84.91%), Postives = 238/265 (89.81%), Query Frame = 0
BLAST of Carg24708 vs. NCBI nr
Match: XP_008464659.1 (PREDICTED: membrane-associated progesterone-binding protein 4 [Cucumis melo]) HSP 1 Score: 447.2 bits (1149), Expect = 4.3e-122 Identity = 223/265 (84.15%), Postives = 236/265 (89.06%), Query Frame = 0
BLAST of Carg24708 vs. TAIR10
Match: AT4G14965.1 (membrane-associated progesterone binding protein 4) HSP 1 Score: 332.8 bits (852), Expect = 2.1e-91 Identity = 161/226 (71.24%), Postives = 188/226 (83.19%), Query Frame = 0
BLAST of Carg24708 vs. TAIR10
Match: AT2G24940.1 (membrane-associated progesterone binding protein 2) HSP 1 Score: 88.6 bits (218), Expect = 7.0e-18 Identity = 44/97 (45.36%), Postives = 60/97 (61.86%), Query Frame = 0
BLAST of Carg24708 vs. TAIR10
Match: AT3G48890.1 (membrane-associated progesterone binding protein 3) HSP 1 Score: 77.8 bits (190), Expect = 1.2e-14 Identity = 54/165 (32.73%), Postives = 81/165 (49.09%), Query Frame = 0
BLAST of Carg24708 vs. TAIR10
Match: AT5G52240.1 (membrane steroid binding protein 1) HSP 1 Score: 69.3 bits (168), Expect = 4.4e-12 Identity = 37/105 (35.24%), Postives = 57/105 (54.29%), Query Frame = 0
BLAST of Carg24708 vs. Swiss-Prot
Match: sp|Q2HIW2|MAPR4_ARATH (Membrane-associated progesterone-binding protein 4 OS=Arabidopsis thaliana OX=3702 GN=MAPR4 PE=2 SV=1) HSP 1 Score: 332.8 bits (852), Expect = 3.9e-90 Identity = 161/226 (71.24%), Postives = 188/226 (83.19%), Query Frame = 0
BLAST of Carg24708 vs. Swiss-Prot
Match: sp|A2CES0|NEUFC_DANRE (Neuferricin OS=Danio rerio OX=7955 GN=cyb5d2 PE=3 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 2.6e-38 Identity = 84/199 (42.21%), Postives = 114/199 (57.29%), Query Frame = 0
BLAST of Carg24708 vs. Swiss-Prot
Match: sp|Q5SSH8|NEUFC_MOUSE (Neuferricin OS=Mus musculus OX=10090 GN=Cyb5d2 PE=1 SV=1) HSP 1 Score: 157.5 bits (397), Expect = 2.2e-37 Identity = 91/256 (35.55%), Postives = 134/256 (52.34%), Query Frame = 0
BLAST of Carg24708 vs. Swiss-Prot
Match: sp|Q6AY62|NEUFC_RAT (Neuferricin OS=Rattus norvegicus OX=10116 GN=Cyb5d2 PE=2 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 3.2e-36 Identity = 78/224 (34.82%), Postives = 119/224 (53.12%), Query Frame = 0
BLAST of Carg24708 vs. Swiss-Prot
Match: sp|Q28FI8|NEUFC_XENTR (Neuferricin OS=Xenopus tropicalis OX=8364 GN=cyb5d2 PE=2 SV=1) HSP 1 Score: 152.5 bits (384), Expect = 7.1e-36 Identity = 81/220 (36.82%), Postives = 120/220 (54.55%), Query Frame = 0
BLAST of Carg24708 vs. TrEMBL
Match: tr|A0A0A0KZ74|A0A0A0KZ74_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G617330 PE=3 SV=1) HSP 1 Score: 453.4 bits (1165), Expect = 4.0e-124 Identity = 225/265 (84.91%), Postives = 238/265 (89.81%), Query Frame = 0
BLAST of Carg24708 vs. TrEMBL
Match: tr|A0A1S3CMH5|A0A1S3CMH5_CUCME (membrane-associated progesterone-binding protein 4 OS=Cucumis melo OX=3656 GN=LOC103502493 PE=3 SV=1) HSP 1 Score: 447.2 bits (1149), Expect = 2.8e-122 Identity = 223/265 (84.15%), Postives = 236/265 (89.06%), Query Frame = 0
BLAST of Carg24708 vs. TrEMBL
Match: tr|A9PA37|A9PA37_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 PE=2 SV=1) HSP 1 Score: 360.1 bits (923), Expect = 4.6e-96 Identity = 174/226 (76.99%), Postives = 193/226 (85.40%), Query Frame = 0
BLAST of Carg24708 vs. TrEMBL
Match: tr|W9SJW3|W9SJW3_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_017717 PE=3 SV=1) HSP 1 Score: 357.5 bits (916), Expect = 3.0e-95 Identity = 166/201 (82.59%), Postives = 187/201 (93.03%), Query Frame = 0
BLAST of Carg24708 vs. TrEMBL
Match: tr|A0A200QK75|A0A200QK75_9MAGN (Cytochrome b5-like heme/steroid binding domain OS=Macleaya cordata OX=56857 GN=BVC80_8757g5 PE=3 SV=1) HSP 1 Score: 354.0 bits (907), Expect = 3.3e-94 Identity = 171/238 (71.85%), Postives = 200/238 (84.03%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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