Carg24700 (gene) Silver-seed gourd

Overview
NameCarg24700
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionprotein RRNAD1 isoform X2
LocationCucurbita_argyrosperma_scaffold_270 : 25081 .. 28338 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTTGTCTAGGTGCGTCTTTAATTGAAGAAGATTGTTTGACTTGGATTTTATTTCCATTAGCTCGTTTTTGGACGTTTATAACTTTGTTTAGAAGCTATATTTTTCGAACTCACTTGTAAGCCATTTATCCACGACAAAAGTTCGCAGGAAGTATTTGACTGATTTGACAATTACGCTCTCTCGTTGATCCATTATAAGTATTTTTGGATATTGTTATATGACGTAATCCTCTAGATACATGTCGATTTTTACGTAATTGTTTGATTATCTGGATCTAAGCATAACATATATCAAATATTGATTTGTTCTTGTAGAGTATTTGAGAAATATTCATGGAAATGAGATCGATCATTAGTTGTAATATTATATTGTTTTTAAATTAGGTATTCTCTAAGATATTACGTTGTTGGACAGCTAATTCTTCGGAAGAATGCTGAGACTGTACATTGACAGATTGCTTTGAAGAAATTCAGTTTCAATTTCTGGGAAAATCAATATGTAAGGGATTGGATTTTATTATTACTATTACTATTATTATTATTATATAACAGATGCCATAAAGATTTCTGTCTAACCTCGTGTGTTTGCATCCTGAGCATATCAATTCAGTTATCGATTGATACATGGATTTAAAAATAAGGACGCTGATTATTTTCATCCACTAACTCCATATCTATCCACTAACTCCATAGATTTCTTATTAAATATTGGTACAGTCTTAGGTGCACATATGATGTCTTTGACTAATTTTTTTAAATAAAACTGAAAGTTATTAAATGGCAAGAACTCAGAAATGAAATATGGCTAGCGTAAAAAAATGCTGATGATTGCCATCTATGTGTCACTACGTGTCATAATGTATTTTCGAACTGCATCATTGACCCTGAAGTAGTTGCTGAGAAGAATCGGAGTTGTTGACTGTTCTCAGCATTGGCCACTAGGGAGTGTTTTGTGTGGAATATTGCTGATAGTTTAATCCATTTAAGGAATTTAAGAAATTATGTGATAGAGCTTTCTATTTTGTTTCTTGTTACGAGGGCACTTACTCTAATGTAGTGAAAACTAATTTTCTGATTTTCTGATCTGACAAAATCATTCAGGAATATTGGCCAGATTCACTAAAGAGATTTATCAGTACTTCAAGATCTGTTGCATTTGAACGTGAACAAGCAGACTTGCAGATGGTAGTACTTTTATGATATACAGATATCATACATGCCTAGTTGATGGATTTTGCTTGATTAGATAGATTTTCTGCCTATAGCAAGATAAGAAACGTAAACTTGAAAATGGCGTACTATCCATTATCCACTAAGGTTTATATATTACAAAATGGATACTTGGGAGGAAGGCATGTTTTTTAGAAGATCTAAAAACTTCCCTAACTTGTGCAGCTTGGGATAAAGAACCCGTTCCTTTTCTGGAACCTCGTCTGCAGCATTCAAACCTCCTTGATCTAGCCAAGCTAAAAATTTCATCTTTTTGGGCACTTATTTCCTCCAAAGAACATTTAATAATTTCTTCGGGTTCAAGGGAGAGCCACCACCATGTTATAGAAAGAGAAGTGAGCTTTAGGTGTAAAGAGGCCATCAGAATTCCAGCTCCGGCATAGCATATTTCTTTCATTAACGAACAGAACACTTTCAAGAAGATGAGAGACTCTAGTTAGAAAGTTCTTTTTCATTGTGCTGTCTTGTATACCTGAGATTCCAGCCACTATCAACCAAATTCCTGCATGCCTGAAACAATGAAGTCTCAGATTCATTAAGATGAAAAAATGTCAGAAATTTCTGATATCGGTCTCCTCCAAGGATACAACAGAAACGTCTCTTGAACAAGGTATTTTAGAATGTGTCCACGACCTTATCTTACTAAATATTTCTATAGATTTCCCCTCCCCTTTTCTTTTTTGTTTAAACTGGGAAGTTTCTTCTTCTTCACCCCTCAACTTTTAGTATCTGGTCCCATTTGTATTCTTTTGTTGCGATTAGAATTATTTGTCACTAGGGAAAAGGATGGTAGGGTATTGACATTTAATCACCCTTTCTTACATGTGTGAAAAAAGTGATGTTTCAGGTTGATTTTATCCATTTCTTAGTTACACATTTGTGACTATTCTTGCATGTTCTACCTGGTTGGTGCATGGCTTCGCTTAACACTGTTCTTTCTCGAGGAATGAATCAAAAGAAAAAGCATGTAGTAATTGAATGATACTTTATGCTTGTATCAAGAACTTCTGTTTTTTCTCCCACGATGGACATCAGTTTCCATCATATTGTTGTTGCTCTTTCTCCTTTCAGGACAGGATTTAACAAAGGTACTATATTCCACAATCTAAATCCGAAGTTTTGTAGACTGCAAGGAAGTAAAAGCAGTCATTAGTACTGGTACTATGACCTTTTTGTTTTTATTTTTATTTTTATCTCATTAGGCTTTTTCATATAACTTAGTTTAATTGTAATTTGCCTTTAGCTTCAAGCATATTTTGAAATAGCACTTAATCTGTAGATCTGTTATGCCTTTTCTTTTAAAGTGTTCCTTTCTTTTTTTCTTTTTTTCTTTTTTTTTTTCCTTTCTTTCTTTCTTTCTTTCTTTATTTATTTTTGTGAAGGTTTTCTATAAATATTATCCAGAAGTTGTATCAACTTGCCTATCTGTTGGGTTTCAAGGAAAGGCTTTGCGACGTCAAAAGAAAAGGGAGGCTACAATATCTCCTCGCAGTGTCATGAACATAAGCTCGAGGCATCACAATAAGGTATGAGGTAGTAAAGACTAGAGTGTCCTACCTTTCTGTTAATCAACGGCGTTCGGTTTGGGCCTAGTATTTTGTGCTGGAATGGAAGATGATAAGAGGGGTTAATGGGCTGTGCAACATAGCTTCAAAGCGTCCATGTGTTTATCTAATAGATAAAATACTACTAATGCAATTTTAACCGTTTCTTTTACCAGTAAAGTGTTCAAGTAACAATTCTCATCTATTTTGTTACCCTGAAAATATACTGCAGATCATATTCATGGTTTGCCAGTCAGCAACAATGCCTTTTCTCTTATTATTTCTGAAAATTGGAGTATGCAATGTGAACAGTCCAAATCTTCTGACAAGTATCCTTTTGTTGAAAAGTTCTGTCAATCTGGATTAAATCGCCTTGGACTTCAATCTTTGCAGTATATGGATAATGAAATATGGATGCACAATGAGCCTTTTGCTGTATGCATACTAAGTTCTTGTCGCTGTTATATAGGACTGATGATA

mRNA sequence

ATGGAGTTGTCTAGGTATTCTCTAAGATATTACGTTGTTGGACAGCTAATTCTTCGGAAGAATGCTGAGACTGAATATTGGCCAGATTCACTAAAGAGATTTATCAGTACTTCAAGATCTGTTGCATTTGAACGTGAACAAGCAGACTTGCAGATGAAATTTCTGATATCGGTCTCCTCCAAGGATACAACAGAAACGTCTCTTGAACAAGGACAGGATTTAACAAAGGTTTTCTATAAATATTATCCAGAAGTTGTATCAACTTGCCTATCTGTTGGGTTTCAAGGAAAGGCTTTGCGACGTCAAAAGAAAAGGGAGGCTACAATATCTCCTCGCAGTGTCATGAACATAAGCTCGAGGCATCACAATAAGTGTTCAAGTAACAATTCTCATCTATTTTGTTACCCTGAAAATATACTGCAGATCATATTCATGGTTTGCCACAACAATGCCTTTTCTCTTATTATTTCTGAAAATTGGAGTATGCAATGTGAACAGTCCAAATCTTCTGACAAGTATCCTTTTGTTGAAAAGTTCTGTCAATCTGGATTAAATCGCCTTGGACTTCAATCTTTGCAGTATATGGATAATGAAATATGGATGCACAATGAGCCTTTTGCTGTATGCATACTAAGTTCTTGTCGCTGTTATATAGGACTGATGATA

Coding sequence (CDS)

ATGGAGTTGTCTAGGTATTCTCTAAGATATTACGTTGTTGGACAGCTAATTCTTCGGAAGAATGCTGAGACTGAATATTGGCCAGATTCACTAAAGAGATTTATCAGTACTTCAAGATCTGTTGCATTTGAACGTGAACAAGCAGACTTGCAGATGAAATTTCTGATATCGGTCTCCTCCAAGGATACAACAGAAACGTCTCTTGAACAAGGACAGGATTTAACAAAGGTTTTCTATAAATATTATCCAGAAGTTGTATCAACTTGCCTATCTGTTGGGTTTCAAGGAAAGGCTTTGCGACGTCAAAAGAAAAGGGAGGCTACAATATCTCCTCGCAGTGTCATGAACATAAGCTCGAGGCATCACAATAAGTGTTCAAGTAACAATTCTCATCTATTTTGTTACCCTGAAAATATACTGCAGATCATATTCATGGTTTGCCACAACAATGCCTTTTCTCTTATTATTTCTGAAAATTGGAGTATGCAATGTGAACAGTCCAAATCTTCTGACAAGTATCCTTTTGTTGAAAAGTTCTGTCAATCTGGATTAAATCGCCTTGGACTTCAATCTTTGCAGTATATGGATAATGAAATATGGATGCACAATGAGCCTTTTGCTGTATGCATACTAAGTTCTTGTCGCTGTTATATAGGACTGATGATA

Protein sequence

MELSRYSLRYYVVGQLILRKNAETEYWPDSLKRFISTSRSVAFEREQADLQMKFLISVSSKDTTETSLEQGQDLTKVFYKYYPEVVSTCLSVGFQGKALRRQKKREATISPRSVMNISSRHHNKCSSNNSHLFCYPENILQIIFMVCHNNAFSLIISENWSMQCEQSKSSDKYPFVEKFCQSGLNRLGLQSLQYMDNEIWMHNEPFAVCILSSCRCYIGLMI
Homology
[Close]
BLAST of Carg24700 vs. NCBI nr
Match: XP_022159769.1 (methyltransferase-like protein 25 [Momordica charantia] >XP_022159778.1 methyltransferase-like protein 25 [Momordica charantia])

HSP 1 Score: 121.3 bits (303), Expect = 4.1e-24
Identity = 71/135 (52.59%), Postives = 86/135 (63.70%), Query Frame = 0 

Query: 77  VFYKYYPEVVSTCLSVGFQGKALRRQKKREATISPRSVMNISSRHHNKCSSNNSHLFCYP 136
           V Y+YYPEVV+TC S+G QGKALRR+KK EA++S +        H +K  ++   L    
Sbjct: 394 VLYRYYPEVVATCPSIGRQGKALRRRKKIEASVSLQC-------HEDKLEASQQDL---- 453

Query: 137 ENILQIIFMVCHNNAFSLIISENWSMQCEQSKSSDKYPFVEKFCQSGLNRLGLQSLQYMD 196
                I  +  + NA SL IS+N SMQCE SK  DKYP  EKFCQSGLNRLGLQ+L+ MD
Sbjct: 454 -----IGELSANRNALSLTISDNGSMQCEPSKYVDKYPLFEKFCQSGLNRLGLQTLRVMD 512

Query: 197 N-EIWMHNEPFAVCI 211
              IWM  EPFA  I
Sbjct: 514 YFGIWMDTEPFAELI 512


HSP 2 Score: 55.8 bits (133), Expect = 2.1e-04
Identity = 34/76 (44.74%), Postives = 46/76 (60.53%), Query Frame = 0 

Query: 16  LILRKNAETEYWPDSLKRFISTSRSVAFEREQADLQMKFLISVSSKDTTETSLEQGQDLT 75
           L++      EYWPDSLK+FI TSRS+AF+REQADLQ   ++      +  T L QG +  
Sbjct: 91  LLIPSGVVQEYWPDSLKKFILTSRSLAFQREQADLQK--VLPGWCMASLNTVLAQGMNQK 150

Query: 76  KVFYKYYPEVVSTCLS 92
           K   K+  EV+S  +S
Sbjct: 151 K---KHEVEVLSAVIS 161

[Close]
BLAST of Carg24700 vs. NCBI nr
Match: XP_022936757.1 (methyltransferase-like protein 25 isoform X2 [Cucurbita moschata])

HSP 1 Score: 121.3 bits (303), Expect = 4.1e-24
Identity = 76/136 (55.88%), Postives = 86/136 (63.24%), Query Frame = 0 

Query: 77  VFYKYYPEVVSTCLSVGFQGKALRRQKKREATISPRSVMNISSRHHNKCSSNNSHLF-CY 136
           V YKY PEVV+TC SVG QGKALRR+KKREA +S       S  H +K  ++ S L    
Sbjct: 378 VLYKYCPEVVATCPSVGRQGKALRRRKKREAALS-------SQCHEDKLEASQSDLIGGL 437

Query: 137 PENILQIIFMVCHNNAFSLIISENWSMQCEQSKSSDKYPFVEKFCQSGLNRLGLQSLQYM 196
           P+N          +NAFS  IS+  S  CEQ+KS DKY   EKFCQSGLNRLGLQSLQ M
Sbjct: 438 PDN----------SNAFSHTISDYGSTPCEQAKSVDKYLLFEKFCQSGLNRLGLQSLQDM 496

Query: 197 D-NEIWMHNEPFAVCI 211
           D   IWM NEPFA  I
Sbjct: 498 DYYGIWMDNEPFAELI 496


HSP 2 Score: 59.3 bits (142), Expect = 1.9e-05
Identity = 37/82 (45.12%), Postives = 50/82 (60.98%), Query Frame = 0 

Query: 11  YVVGQLILRKNAETEYWPDSLKRFISTSRSVAFEREQADLQMKFLISVSSKDTTETSLEQ 70
           +V   L++   A  EYWPDSLK+FI TSRS+AF REQADLQM  ++      +  T L Q
Sbjct: 69  HVKNLLLIPSGAVQEYWPDSLKKFIRTSRSLAFGREQADLQM--VLPGWCIASLNTVLSQ 128

Query: 71  GQDLTKVFYKYYPEVVSTCLSV 93
           G +  K   K+  EV+S  +S+
Sbjct: 129 GMNQKK---KHEVEVLSAIISL 145

[Close]
BLAST of Carg24700 vs. NCBI nr
Match: XP_022936756.1 (methyltransferase-like protein 25 isoform X1 [Cucurbita moschata])

HSP 1 Score: 121.3 bits (303), Expect = 4.1e-24
Identity = 76/136 (55.88%), Postives = 86/136 (63.24%), Query Frame = 0 

Query: 77  VFYKYYPEVVSTCLSVGFQGKALRRQKKREATISPRSVMNISSRHHNKCSSNNSHLF-CY 136
           V YKY PEVV+TC SVG QGKALRR+KKREA +S       S  H +K  ++ S L    
Sbjct: 386 VLYKYCPEVVATCPSVGRQGKALRRRKKREAALS-------SQCHEDKLEASQSDLIGGL 445

Query: 137 PENILQIIFMVCHNNAFSLIISENWSMQCEQSKSSDKYPFVEKFCQSGLNRLGLQSLQYM 196
           P+N          +NAFS  IS+  S  CEQ+KS DKY   EKFCQSGLNRLGLQSLQ M
Sbjct: 446 PDN----------SNAFSHTISDYGSTPCEQAKSVDKYLLFEKFCQSGLNRLGLQSLQDM 504

Query: 197 D-NEIWMHNEPFAVCI 211
           D   IWM NEPFA  I
Sbjct: 506 DYYGIWMDNEPFAELI 504


HSP 2 Score: 59.3 bits (142), Expect = 1.9e-05
Identity = 37/82 (45.12%), Postives = 50/82 (60.98%), Query Frame = 0 

Query: 11  YVVGQLILRKNAETEYWPDSLKRFISTSRSVAFEREQADLQMKFLISVSSKDTTETSLEQ 70
           +V   L++   A  EYWPDSLK+FI TSRS+AF REQADLQM  ++      +  T L Q
Sbjct: 69  HVKNLLLIPSGAVQEYWPDSLKKFIRTSRSLAFGREQADLQM--VLPGWCIASLNTVLSQ 128

Query: 71  GQDLTKVFYKYYPEVVSTCLSV 93
           G +  K   K+  EV+S  +S+
Sbjct: 129 GMNQKK---KHEVEVLSAIISL 145

[Close]
BLAST of Carg24700 vs. NCBI nr
Match: XP_023521986.1 (methyltransferase-like protein 25 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 120.2 bits (300), Expect = 9.1e-24
Identity = 75/135 (55.56%), Postives = 85/135 (62.96%), Query Frame = 0 

Query: 77  VFYKYYPEVVSTCLSVGFQGKALRRQKKREATISPRSVMNISSRHHNKCSSNNSHLFCYP 136
           V YKYYPEVV+TC SVG QGKALRR+KKREA +S       S  H +K  ++ S L    
Sbjct: 378 VLYKYYPEVVATCPSVGRQGKALRRRKKREAALS-------SQCHEDKLEASQSDL---- 437

Query: 137 ENILQIIFMVCHNNAFSLIISENWSMQCEQSKSSDKYPFVEKFCQSGLNRLGLQSLQYMD 196
                I  +   +NAFS  IS+  S  CEQ+KS DKY   E FCQSGLNRLGLQSLQ MD
Sbjct: 438 -----IGGLPDKSNAFSHTISDYGSTPCEQAKSVDKYLLFENFCQSGLNRLGLQSLQDMD 496

Query: 197 -NEIWMHNEPFAVCI 211
              IWM NEPFA  I
Sbjct: 498 YYGIWMDNEPFAELI 496


HSP 2 Score: 59.3 bits (142), Expect = 1.9e-05
Identity = 37/82 (45.12%), Postives = 50/82 (60.98%), Query Frame = 0 

Query: 11  YVVGQLILRKNAETEYWPDSLKRFISTSRSVAFEREQADLQMKFLISVSSKDTTETSLEQ 70
           +V   L++   A  EYWPDSLK+FI TSRS+AF REQADLQM  ++      +  T L Q
Sbjct: 69  HVKNLLLIPSGAVQEYWPDSLKKFIRTSRSLAFGREQADLQM--VLPGWCIASLNTVLSQ 128

Query: 71  GQDLTKVFYKYYPEVVSTCLSV 93
           G +  K   K+  EV+S  +S+
Sbjct: 129 GMNQKK---KHEVEVLSAIISL 145

[Close]
BLAST of Carg24700 vs. NCBI nr
Match: XP_023521985.1 (methyltransferase-like protein 25 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 120.2 bits (300), Expect = 9.1e-24
Identity = 75/135 (55.56%), Postives = 85/135 (62.96%), Query Frame = 0 

Query: 77  VFYKYYPEVVSTCLSVGFQGKALRRQKKREATISPRSVMNISSRHHNKCSSNNSHLFCYP 136
           V YKYYPEVV+TC SVG QGKALRR+KKREA +S       S  H +K  ++ S L    
Sbjct: 386 VLYKYYPEVVATCPSVGRQGKALRRRKKREAALS-------SQCHEDKLEASQSDL---- 445

Query: 137 ENILQIIFMVCHNNAFSLIISENWSMQCEQSKSSDKYPFVEKFCQSGLNRLGLQSLQYMD 196
                I  +   +NAFS  IS+  S  CEQ+KS DKY   E FCQSGLNRLGLQSLQ MD
Sbjct: 446 -----IGGLPDKSNAFSHTISDYGSTPCEQAKSVDKYLLFENFCQSGLNRLGLQSLQDMD 504

Query: 197 -NEIWMHNEPFAVCI 211
              IWM NEPFA  I
Sbjct: 506 YYGIWMDNEPFAELI 504


HSP 2 Score: 59.3 bits (142), Expect = 1.9e-05
Identity = 37/82 (45.12%), Postives = 50/82 (60.98%), Query Frame = 0 

Query: 11  YVVGQLILRKNAETEYWPDSLKRFISTSRSVAFEREQADLQMKFLISVSSKDTTETSLEQ 70
           +V   L++   A  EYWPDSLK+FI TSRS+AF REQADLQM  ++      +  T L Q
Sbjct: 69  HVKNLLLIPSGAVQEYWPDSLKKFIRTSRSLAFGREQADLQM--VLPGWCIASLNTVLSQ 128

Query: 71  GQDLTKVFYKYYPEVVSTCLSV 93
           G +  K   K+  EV+S  +S+
Sbjct: 129 GMNQKK---KHEVEVLSAIISL 145

[Close]
BLAST of Carg24700 vs. TAIR10
Match: AT1G16650.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein)

HSP 1 Score: 48.5 bits (114), Expect = 6.1e-06
Identity = 29/76 (38.16%), Postives = 45/76 (59.21%), Query Frame = 0 

Query: 16  LILRKNAETEYWPDSLKRFISTSRSVAFEREQADLQMKFLISVSSKDTTETSLEQGQDLT 75
           L++      ++WP SLK+F+ T RS++F REQADLQ   +++        T L QG +L 
Sbjct: 65  LLIPSGGVQDHWPASLKKFVHTLRSLSFPREQADLQA--ILADVDMVPLSTVLSQGMNLK 124

Query: 76  KVFYKYYPEVVSTCLS 92
           K   K+  EV+S+ +S
Sbjct: 125 K---KHEVEVLSSVVS 135

[Close]
BLAST of Carg24700 vs. TrEMBL
Match: tr|A0A1S3BAS0|A0A1S3BAS0_CUCME (protein RRNAD1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487650 PE=4 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 3.1e-20
Identity = 68/135 (50.37%), Postives = 79/135 (58.52%), Query Frame = 0 

Query: 77  VFYKYYPEVVSTCLSVGFQGKALRRQKKREATISPRSVMNISSRHHNKCSSNNSHLFCYP 136
           V YKYYP+VV+TC S+G QGKALRRQKKRE ++S       S    +K  ++ S L    
Sbjct: 383 VLYKYYPDVVATCPSIGRQGKALRRQKKREGSVS-------SQCREDKLEASQSDL---- 442

Query: 137 ENILQIIFMVCHNNAFSLIISENWSMQCEQSKSSDKYPFVEKFCQSGLNRLGLQSLQYMD 196
                I     + NAFS  IS++ S  CEQSKS DKYP  EKFC SGL RLGLQS Q  D
Sbjct: 443 -----IGGFQVNANAFSHTISDHGSTPCEQSKSVDKYPLFEKFCHSGLIRLGLQSSQDTD 501

Query: 197 -NEIWMHNEPFAVCI 211
              IW   EPF   I
Sbjct: 503 CYGIWTDTEPFTELI 501


HSP 2 Score: 53.1 bits (126), Expect = 9.0e-04
Identity = 32/77 (41.56%), Postives = 47/77 (61.04%), Query Frame = 0 

Query: 16  LILRKNAETEYWPDSLKRFISTSRSVAFEREQADLQMKFLISVSSKDTTETSLEQGQDLT 75
           L++      E WP+SLK+FI TS+S+AF+REQADLQM  ++      +  T L QG +  
Sbjct: 74  LLIPSGVVQENWPESLKKFIRTSKSLAFQREQADLQM--VLPGWCMASLNTVLSQGMNQK 133

Query: 76  KVFYKYYPEVVSTCLSV 93
           K   K+  EV+S  +S+
Sbjct: 134 K---KHEVEVLSAIISL 145

[Close]
BLAST of Carg24700 vs. TrEMBL
Match: tr|A0A0A0L857|A0A0A0L857_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G523080 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 8.7e-15
Identity = 55/109 (50.46%), Postives = 66/109 (60.55%), Query Frame = 0 

Query: 104 KREATIS-PRSVMNISSRHHNKCSSNNSHLFCYPENILQIIFMVCHNNAFSLIISENWSM 163
           KR+  I  PRSVM IS RHHN+C ++   +   P N+          NAFS  +S++ S 
Sbjct: 115 KRKGRIQYPRSVMKISLRHHNQCVAD--LIGGLPVNV----------NAFSHTVSDHGST 174

Query: 164 QCEQSKSSDKYPFVEKFCQSGLNRLGLQSLQYMD-NEIWMHNEPFAVCI 211
            CEQSKS DKYP  EKFC SGLNRLG+QS Q MD   IWM  +PF   I
Sbjct: 175 PCEQSKSVDKYPLFEKFCHSGLNRLGIQSSQDMDCYGIWMDTDPFTELI 211

[Close]
BLAST of Carg24700 vs. TrEMBL
Match: tr|A0A2I0IYQ4|A0A2I0IYQ4_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_030485 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.4e-12
Identity = 67/215 (31.16%), Postives = 93/215 (43.26%), Query Frame = 0 

Query: 26  YWPDSLKRFISTSRSVAFEREQADLQMKFLISVSSKDTTETSLEQGQDLTK--------- 85
           +WP SLK+F+ T R ++F R+QADLQ  F       D+  + L QG  + K         
Sbjct: 84  HWPASLKKFVHTLRCLSFPRDQADLQTMF--PGLHADSLSSVLIQGMSMKKKHEVEVLSA 143

Query: 86  ---------------------VFYKYYPEVVSTCLSVGFQGKALRRQKKR---EATISPR 145
                                V   +YPEV+ T  S+G QGKA+RRQ++R   E++++  
Sbjct: 144 IVSFIAKRVGAHTIIDVGAGQVLLSHYPEVMVTSPSIGRQGKAMRRQQQRRILESSLNQE 203

Query: 146 SVMNISSRHHNKCSSNNSHLFCYPENILQIIFMVCHNNAFSLIISENWSMQCEQSKSSDK 205
           S   + S   +  S NN                               S  CE++ S   
Sbjct: 204 SSCRVGSDFDSNGSCNNR------------------------------STICERAPSGTN 263

Query: 206 YPFVEKFCQSGLNRLGLQSLQYMD-NEIWMHNEPF 207
           Y   E+F  SGL RLGLQ LQ MD + IW  +EPF
Sbjct: 264 YSNFEEFSLSGLQRLGLQPLQDMDLHWIWKEHEPF 266

[Close]
BLAST of Carg24700 vs. TrEMBL
Match: tr|A0A2N9IXS6|A0A2N9IXS6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56942 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 9.0e-12
Identity = 63/169 (37.28%), Postives = 87/169 (51.48%), Query Frame = 0 

Query: 74  LTKVFYKYYPEVVSTCLSVGFQGKALRR--QKKREATISPRSVMNISSRHHNKCSSNN-- 133
           L +V  KYYPEV  T  S+G QGKALRR  Q+K E+ +  + +M  S   + K S  N  
Sbjct: 261 LQRVLCKYYPEVTITNPSIGRQGKALRRRQQRKVESPLHHKEIMCPSLHSNTKGSFPNIE 320

Query: 134 ---------------SHLFC-YPENILQIIFMVCHNNAFSLIISENWSMQCEQSKSSDKY 193
                            L C +   I++   +    +A S  IS + S +CE+ KS DKY
Sbjct: 321 STELETAELYKQWTLKQLGCIFWVVIVENTGLAMDTDALSHGISSSKSTRCEEPKSVDKY 380

Query: 194 PFVEKFCQSGLNRLGLQSLQYMD-NEIWMHNEPFAVCILSSCRCYIGLM 222
              EKF QSGL RLGL+  Q ++ +EIW   EPFA+ +     C +G+M
Sbjct: 381 ALFEKFSQSGLCRLGLKPSQDINFHEIWKEAEPFALVL-----CLVGVM 424

[Close]
BLAST of Carg24700 vs. TrEMBL
Match: tr|A0A067KND7|A0A067KND7_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06847 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.5e-11
Identity = 54/136 (39.71%), Postives = 77/136 (56.62%), Query Frame = 0 

Query: 77  VFYKYYPEVVSTCLSVGFQGKALRRQKKREATISPRSVMNISSRH-HNKCSSNNSHLFCY 136
           V  KYYPE++    S+G QGKALRRQ++R+       +++ + RH  NK   + S + C 
Sbjct: 356 VLSKYYPEIMKASPSIGRQGKALRRQQQRK-------ILHSALRHGENKLPQSISEMDCN 415

Query: 137 PENILQIIFMVCHNNAFSLII---SENWSMQCEQSKSSDKYPFVEKFCQSGLNRLGLQSL 196
             ++         ++A    I   S N  M+CE + S+DKY   EKF  SGL+RLGL+ L
Sbjct: 416 CVSVQPRESKTDDSSAAESSINTLSCNGIMRCEGNASADKYLLFEKFSHSGLSRLGLKPL 475

Query: 197 QYMD-NEIWMHNEPFA 208
           Q +D +EIW   EPFA
Sbjct: 476 QEIDLHEIWEEVEPFA 484

The following BLAST results are available for this feature:
BLAST of Carg24700 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022159769.14.1e-2452.59methyltransferase-like protein 25 [Momordica charantia] >XP_022159778.1 methyltr... [more]
XP_022936757.14.1e-2455.88methyltransferase-like protein 25 isoform X2 [Cucurbita moschata][more]
XP_022936756.14.1e-2455.88methyltransferase-like protein 25 isoform X1 [Cucurbita moschata][more]
XP_023521986.19.1e-2455.56methyltransferase-like protein 25 isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_023521985.19.1e-2455.56methyltransferase-like protein 25 isoform X1 [Cucurbita pepo subsp. pepo][more]
BLAST of Carg24700 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G16650.16.1e-0638.16S-adenosyl-L-methionine-dependent methyltransferases superfamily protein[more]
BLAST of Carg24700 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg24700 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BAS0|A0A1S3BAS0_CUCME3.1e-2050.37protein RRNAD1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103487650 PE=4 SV=1[more]
tr|A0A0A0L857|A0A0A0L857_CUCSA8.7e-1550.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G523080 PE=4 SV=1[more]
tr|A0A2I0IYQ4|A0A2I0IYQ4_PUNGR1.4e-1231.16Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_030485 PE=4 SV=1[more]
tr|A0A2N9IXS6|A0A2N9IXS6_FAGSY9.0e-1237.28Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56942 PE=4 SV=1[more]
tr|A0A067KND7|A0A067KND7_JATCU1.5e-1139.71Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_06847 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24700-RACarg24700-RAmRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg24700Cla023220Watermelon (97103) v1carwmB0637
Carg24700ClCG11G016310Watermelon (Charleston Gray)carwcgB0620
Carg24700CmaCh01G013360Cucurbita maxima (Rimu)carcmaB0904
Carg24700Cp4.1LG02g02770Cucurbita pepo (Zucchini)carcpeB0909
Carg24700Cla97C11G222270Watermelon (97103) v2carwmbB0667
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg24700Cucurbita moschata (Rifu)carcmoB0881