Carg24660 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24660
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein BPS1, chloroplastic-like
Location	Cucurbita_argyrosperma_scaffold_269 : 159850 .. 160890 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCCGATCACAAGAGCCGCCCCACCGGCTATTCTTCCCTTTCGGGAACCCTTTCCGTGCAAGAACACCCAAGGGTTCAAAATTGTCTTCCAAACTTGTTTTTCTGCTAGCCACTTTTGAGGATTCCTTGGCAGAGGGGCTGATAAAACTGACTCCAAAATCGGAGAATGACATACTTAGCTTCTCATGGATGGCATTAGCAATGAAGCTGCTTTGCGAAACTCACAAAGATGTAAAAACACTTATAGAAGAGCTTGAGCTCCCTGTGTCTGACTGGGATGAGAAATGGCTAGATGAGTACCTGGACATCAGTTTGAAATTACTTGATATATGCAATGATTTTAGCTCTGAGCTCTCACAGTTGAGTCAGGGTCATCTGGTACTTCGGTGTGCTTTGCACAATCTGGCGTCTACATCTTTGAACCAGTTTGTTCATGCTCGTTCTTCGTTAGATGGATGGAATCAACATATTAGTAACAGAACCTCCAGAGTTAAGATCCATTCTCCTATTTTGGACCGTCTTAAGGAATCGCTTGATCTTCCGAAAGTTCAGAAGAACTCAGCTAAAGGCAAGGTTTTGATGCATGTAATGTATGGAGTGAAGGTGGTGACTCTGTTTATTTGCAGTGTTTTAGCTTCTGCTTTCACGGGTTCATCCGTAAGTTTGTTATCCATCAATATTCCGGATACATATAGATGGGCTCAAGCTTTTACTGAATTACAGAAAAATGTAAATTCCAGTGGAAGATCTACTGTATTGAGAGAGCGTGATGCAGTGGATGAGAGTGTTAAAAAATTGCATTCCATGATTCAAGGAAATGTGGATGGCGGCACGAAAGTAGAAGAATTCCAGAATCTGGTTGTAGATTTGGGGAGGGAGGCAGAAAAGCTTACACAAGGTGTTGATCATCTTACTAAACAAGTGGATGAGTTTTTTCACGTTGTTTTATCTGGACGAGATGCATTGCTTTCAAATCTTAGAGAAAGTGAGACGGTACTTGATCAGGGATCGGGGGAGCTGCGTACAAGGCAACTGTGA

mRNA sequence

ATGAGCCGATCACAAGAGCCGCCCCACCGGCTATTCTTCCCTTTCGGGAACCCTTTCCGTGCAAGAACACCCAAGGGTTCAAAATTGTCTTCCAAACTTGTTTTTCTGCTAGCCACTTTTGAGGATTCCTTGGCAGAGGGGCTGATAAAACTGACTCCAAAATCGGAGAATGACATACTTAGCTTCTCATGGATGGCATTAGCAATGAAGCTGCTTTGCGAAACTCACAAAGATGTAAAAACACTTATAGAAGAGCTTGAGCTCCCTGTGTCTGACTGGGATGAGAAATGGCTAGATGAGTACCTGGACATCAGTTTGAAATTACTTGATATATGCAATGATTTTAGCTCTGAGCTCTCACAGTTGAGTCAGGGTCATCTGGTACTTCGGTGTGCTTTGCACAATCTGGCGTCTACATCTTTGAACCAGTTTGTTCATGCTCGTTCTTCGTTAGATGGATGGAATCAACATATTAGTAACAGAACCTCCAGAGTTAAGATCCATTCTCCTATTTTGGACCGTCTTAAGGAATCGCTTGATCTTCCGAAAGTTCAGAAGAACTCAGCTAAAGGCAAGGTTTTGATGCATGTAATGTATGGAGTGAAGGTGGTGACTCTGTTTATTTGCAGTGTTTTAGCTTCTGCTTTCACGGGTTCATCCGTAAGTTTGTTATCCATCAATATTCCGGATACATATAGATGGGCTCAAGCTTTTACTGAATTACAGAAAAATGTAAATTCCAGTGGAAGATCTACTGTATTGAGAGAGCGTGATGCAGTGGATGAGAGTGTTAAAAAATTGCATTCCATGATTCAAGGAAATGTGGATGGCGGCACGAAAGTAGAAGAATTCCAGAATCTGGTTGTAGATTTGGGGAGGGAGGCAGAAAAGCTTACACAAGGTGTTGATCATCTTACTAAACAAGTGGATGAGTTTTTTCACGTTGTTTTATCTGGACGAGATGCATTGCTTTCAAATCTTAGAGAAAGTGAGACGGTACTTGATCAGGGATCGGGGGAGCTGCGTACAAGGCAACTGTGA

Coding sequence (CDS)

ATGAGCCGATCACAAGAGCCGCCCCACCGGCTATTCTTCCCTTTCGGGAACCCTTTCCGTGCAAGAACACCCAAGGGTTCAAAATTGTCTTCCAAACTTGTTTTTCTGCTAGCCACTTTTGAGGATTCCTTGGCAGAGGGGCTGATAAAACTGACTCCAAAATCGGAGAATGACATACTTAGCTTCTCATGGATGGCATTAGCAATGAAGCTGCTTTGCGAAACTCACAAAGATGTAAAAACACTTATAGAAGAGCTTGAGCTCCCTGTGTCTGACTGGGATGAGAAATGGCTAGATGAGTACCTGGACATCAGTTTGAAATTACTTGATATATGCAATGATTTTAGCTCTGAGCTCTCACAGTTGAGTCAGGGTCATCTGGTACTTCGGTGTGCTTTGCACAATCTGGCGTCTACATCTTTGAACCAGTTTGTTCATGCTCGTTCTTCGTTAGATGGATGGAATCAACATATTAGTAACAGAACCTCCAGAGTTAAGATCCATTCTCCTATTTTGGACCGTCTTAAGGAATCGCTTGATCTTCCGAAAGTTCAGAAGAACTCAGCTAAAGGCAAGGTTTTGATGCATGTAATGTATGGAGTGAAGGTGGTGACTCTGTTTATTTGCAGTGTTTTAGCTTCTGCTTTCACGGGTTCATCCGTAAGTTTGTTATCCATCAATATTCCGGATACATATAGATGGGCTCAAGCTTTTACTGAATTACAGAAAAATGTAAATTCCAGTGGAAGATCTACTGTATTGAGAGAGCGTGATGCAGTGGATGAGAGTGTTAAAAAATTGCATTCCATGATTCAAGGAAATGTGGATGGCGGCACGAAAGTAGAAGAATTCCAGAATCTGGTTGTAGATTTGGGGAGGGAGGCAGAAAAGCTTACACAAGGTGTTGATCATCTTACTAAACAAGTGGATGAGTTTTTTCACGTTGTTTTATCTGGACGAGATGCATTGCTTTCAAATCTTAGAGAAAGTGAGACGGTACTTGATCAGGGATCGGGGGAGCTGCGTACAAGGCAACTGTGA

Protein sequence

MSRSQEPPHRLFFPFGNPFRARTPKGSKLSSKLVFLLATFEDSLAEGLIKLTPKSENDILSFSWMALAMKLLCETHKDVKTLIEELELPVSDWDEKWLDEYLDISLKLLDICNDFSSELSQLSQGHLVLRCALHNLASTSLNQFVHARSSLDGWNQHISNRTSRVKIHSPILDRLKESLDLPKVQKNSAKGKVLMHVMYGVKVVTLFICSVLASAFTGSSVSLLSINIPDTYRWAQAFTELQKNVNSSGRSTVLRERDAVDESVKKLHSMIQGNVDGGTKVEEFQNLVVDLGREAEKLTQGVDHLTKQVDEFFHVVLSGRDALLSNLRESETVLDQGSGELRTRQL

Homology

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BLAST of Carg24660 vs. NCBI nr
Match: XP_022935440.1 (protein BPS1, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 665.2 bits (1715), Expect = 1.2e-187
Identity = 340/346 (98.27%), Postives = 344/346 (99.42%), Query Frame = 0


Query: 1   MSRSQEPPHRLFFPFGNPFRARTPKGSKLSSKLVFLLATFEDSLAEGLIKLTPKSENDIL 60
           MSRSQEPPHRLFFPFGNPFRARTPKGSKLSSKLVFLLATFEDSLAEGLIKLTPKSENDIL
Sbjct: 1   MSRSQEPPHRLFFPFGNPFRARTPKGSKLSSKLVFLLATFEDSLAEGLIKLTPKSENDIL 60

Query: 61  SFSWMALAMKLLCETHKDVKTLIEELELPVSDWDEKWLDEYLDISLKLLDICNDFSSELS 120
           SFSWMALA+KLLCETHKDVKTLIEELELPVSDWDEKWLDEYLDISLKLLDICNDFSSELS
Sbjct: 61  SFSWMALAVKLLCETHKDVKTLIEELELPVSDWDEKWLDEYLDISLKLLDICNDFSSELS 120

Query: 121 QLSQGHLVLRCALHNLASTSLNQFVHARSSLDGWNQHISNRTSRVKIHSPILDRLKESLD 180
           QL+QGHLVLRCALHNLASTSLNQFVHARSSLDGWNQHISNRTSRVK HSPILDRLKESLD
Sbjct: 121 QLNQGHLVLRCALHNLASTSLNQFVHARSSLDGWNQHISNRTSRVKSHSPILDRLKESLD 180

Query: 181 LPKVQKNSAKGKVLMHVMYGVKVVTLFICSVLASAFTGSSVSLLSINIPDTYRWAQAFTE 240
           LPKVQKNSAKGKVL+HVMYGVKVVTLFICSVLASAFTGSSVSLLSINIPDTYRWAQAFTE
Sbjct: 181 LPKVQKNSAKGKVLIHVMYGVKVVTLFICSVLASAFTGSSVSLLSINIPDTYRWAQAFTE 240

Query: 241 LQKNVNSSGRSTVLRERDAVDESVKKLHSMIQGNVDGGTKVEEFQNLVVDLGREAEKLTQ 300
           LQKNVNSSGRSTVLRERDAVDESVKKLHSMIQGNVDGG K+EEFQNLVVDLGREAEKLTQ
Sbjct: 241 LQKNVNSSGRSTVLRERDAVDESVKKLHSMIQGNVDGGMKLEEFQNLVVDLGREAEKLTQ 300

Query: 301 GVDHLTKQVDEFFHVVLSGRDALLSNLRESETVLDQGSGELRTRQL 347
           GVDHLTKQVDEFFHVVLSGRDALLSNLRESETVLDQGSGELRTRQL
Sbjct: 301 GVDHLTKQVDEFFHVVLSGRDALLSNLRESETVLDQGSGELRTRQL 346

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BLAST of Carg24660 vs. NCBI nr
Match: XP_023539967.1 (protein BPS1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 652.5 bits (1682), Expect = 7.9e-184
Identity = 334/346 (96.53%), Postives = 338/346 (97.69%), Query Frame = 0


Query: 1   MSRSQEPPHRLFFPFGNPFRARTPKGSKLSSKLVFLLATFEDSLAEGLIKLTPKSENDIL 60
           MSRSQEPPHRLFFPFGNPFRARTPKGSKL+SKLVFLLATFEDSLAEGL KLTPKSENDIL
Sbjct: 1   MSRSQEPPHRLFFPFGNPFRARTPKGSKLNSKLVFLLATFEDSLAEGLRKLTPKSENDIL 60

Query: 61  SFSWMALAMKLLCETHKDVKTLIEELELPVSDWDEKWLDEYLDISLKLLDICNDFSSELS 120
           SFSWMALAMKLLCETHKDVKTLIEELELPVSDWDEKWLDEYLDISLKLLDICNDFSSELS
Sbjct: 61  SFSWMALAMKLLCETHKDVKTLIEELELPVSDWDEKWLDEYLDISLKLLDICNDFSSELS 120

Query: 121 QLSQGHLVLRCALHNLASTSLNQFVHARSSLDGWNQHISNRTSRVKIHSPILDRLKESLD 180
           QL+QGHLVLRCALHNLASTS NQFVHARSSLDGWNQHISNRTSRVK HSPILDRLKESLD
Sbjct: 121 QLNQGHLVLRCALHNLASTSSNQFVHARSSLDGWNQHISNRTSRVKSHSPILDRLKESLD 180

Query: 181 LPKVQKNSAKGKVLMHVMYGVKVVTLFICSVLASAFTGSSVSLLSINIPDTYRWAQAFTE 240
           LPKVQKNSAKGKVLMHVMYGVKVVTLFICSVLASAF GSSVSLLSINIPDTYRWAQAFTE
Sbjct: 181 LPKVQKNSAKGKVLMHVMYGVKVVTLFICSVLASAFAGSSVSLLSINIPDTYRWAQAFTE 240

Query: 241 LQKNVNSSGRSTVLRERDAVDESVKKLHSMIQGNVDGGTKVEEFQNLVVDLGREAEKLTQ 300
           LQKNVNSSGRSTV RERDAVDESVKKLHSMIQGNVDGG K +EFQNLVVDLGREAEKLTQ
Sbjct: 241 LQKNVNSSGRSTVWRERDAVDESVKKLHSMIQGNVDGGMKGQEFQNLVVDLGREAEKLTQ 300

Query: 301 GVDHLTKQVDEFFHVVLSGRDALLSNLRESETVLDQGSGELRTRQL 347
           GVDHLTKQVDEFFH+VLSGRDALLSNLRESETVLDQGSGELR RQL
Sbjct: 301 GVDHLTKQVDEFFHIVLSGRDALLSNLRESETVLDQGSGELRIRQL 346

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BLAST of Carg24660 vs. NCBI nr
Match: XP_022974571.1 (protein BPS1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 639.8 bits (1649), Expect = 5.3e-180
Identity = 330/346 (95.38%), Postives = 333/346 (96.24%), Query Frame = 0


Query: 1   MSRSQEPPHRLFFPFGNPFRARTPKGSKLSSKLVFLLATFEDSLAEGLIKLTPKSENDIL 60
           MSRSQEPPHRLFFPFGNPFRARTPKGSKLSSKLVFLLATFEDSLAEGL KLT KSENDIL
Sbjct: 1   MSRSQEPPHRLFFPFGNPFRARTPKGSKLSSKLVFLLATFEDSLAEGLRKLTSKSENDIL 60

Query: 61  SFSWMALAMKLLCETHKDVKTLIEELELPVSDWDEKWLDEYLDISLKLLDICNDFSSELS 120
           SFSWMALAMKLLCETH DVKTLIEELELPVSDWDEKWLDEYLDIS+KLLDICNDFSSELS
Sbjct: 61  SFSWMALAMKLLCETHVDVKTLIEELELPVSDWDEKWLDEYLDISVKLLDICNDFSSELS 120

Query: 121 QLSQGHLVLRCALHNLASTSLNQFVHARSSLDGWNQHISNRTSRVKIHSPILDRLKESLD 180
           QL+QGHLVLRCALHNLASTSLNQ VHA SSLDGWNQHISNRTSRVK HSPILDRLK SLD
Sbjct: 121 QLNQGHLVLRCALHNLASTSLNQLVHACSSLDGWNQHISNRTSRVKSHSPILDRLKGSLD 180

Query: 181 LPKVQKNSAKGKVLMHVMYGVKVVTLFICSVLASAFTGSSVSLLSINIPDTYRWAQAFTE 240
           LPKVQKNSAKGKVLMHVMYGVKVVTLFICSVLASAF GSSVSLLSINIPDTYRWAQAFTE
Sbjct: 181 LPKVQKNSAKGKVLMHVMYGVKVVTLFICSVLASAFAGSSVSLLSINIPDTYRWAQAFTE 240

Query: 241 LQKNVNSSGRSTVLRERDAVDESVKKLHSMIQGNVDGGTKVEEFQNLVVDLGREAEKLTQ 300
           LQKNVNSSG  TVLRERDA+DESVKKLHSMIQGNVDGG KVEEFQNLVVDLGREAEKLTQ
Sbjct: 241 LQKNVNSSGSFTVLRERDAMDESVKKLHSMIQGNVDGGMKVEEFQNLVVDLGREAEKLTQ 300

Query: 301 GVDHLTKQVDEFFHVVLSGRDALLSNLRESETVLDQGSGELRTRQL 347
            VDHLTKQVDEFFHVVLSGRDALLSNLRESETVLDQGSGELRTR L
Sbjct: 301 SVDHLTKQVDEFFHVVLSGRDALLSNLRESETVLDQGSGELRTRHL 346

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BLAST of Carg24660 vs. NCBI nr
Match: XP_022979340.1 (protein BPS1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 523.5 bits (1347), Expect = 5.6e-145
Identity = 278/352 (78.98%), Postives = 298/352 (84.66%), Query Frame = 0


Query: 1   MSRSQEPPHRLFFPFGNPFRARTPKGSKLSSKLVFLLATFEDSLAEGLIKLTPKSENDIL 60
           MS+ QE PHR FF FGNPFRA +PKGSKLSS+LVFLLATFEDSLA+ L KLTPKS+ND+ 
Sbjct: 1   MSKPQE-PHRPFFHFGNPFRAISPKGSKLSSRLVFLLATFEDSLAQKLTKLTPKSDNDVF 60

Query: 61  SFSWMALAMKLLCETHKDVKTLIEELELPVSDWDEKWLDEYLDISLKLLDICNDFSSELS 120
           SF WM LAMKLLCE H DVKTLI +LELPVSDW EKWLDEYLDIS+KLLDICNDFSS+LS
Sbjct: 61  SFLWMGLAMKLLCEIHNDVKTLIGDLELPVSDWGEKWLDEYLDISVKLLDICNDFSSDLS 120

Query: 121 QLSQGHLVLRCALHNLASTSLNQFVHARSSLDGWNQHISNRTSRVKIHSPILDRLKESLD 180
           QL+QGHL+LRCALHNLASTS NQFV AR SLD WNQHIS+RTSRV+  SPI+D L+E LD
Sbjct: 121 QLNQGHLILRCALHNLASTSSNQFVPARCSLDAWNQHISSRTSRVENRSPIMDHLEELLD 180

Query: 181 LPKVQKNSAKGKVLMHVMYGVKVVTLFICSVLASAFTGSSVSLLSINIPDTYRWAQAFTE 240
           LPKV KNS KGKVLM VMYGVKV TLFICSV A AF+GSS  LLSI++PDTYRWAQAFTE
Sbjct: 181 LPKV-KNSPKGKVLMQVMYGVKVATLFICSVFAYAFSGSSKRLLSIHVPDTYRWAQAFTE 240

Query: 241 LQKNVN-------SSGRSTVLRERDAVDESVKKLHSMIQGNVDGGTKVEEFQNLVVDLGR 300
           LQKNVN       SSGR T LR  DAVDE VKKLHSMIQ N+DGG KVEE QNL+VDL  
Sbjct: 241 LQKNVNMGIKINHSSGRFTALRVLDAVDERVKKLHSMIQENIDGGMKVEECQNLIVDLRS 300

Query: 301 EAEKLTQGVDHLTKQVDEFFHVVLSGRDALLSNLRESETVLDQGSGELRTRQ 346
           EAEKLTQGVDHLTKQVDEFFHVVLSGRDALLSNLR SETV  QG   L TRQ
Sbjct: 301 EAEKLTQGVDHLTKQVDEFFHVVLSGRDALLSNLRSSETVFGQGMEGLSTRQ 350

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BLAST of Carg24660 vs. NCBI nr
Match: XP_022924524.1 (protein BPS1, chloroplastic-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 520.8 bits (1340), Expect = 3.6e-144
Identity = 275/352 (78.12%), Postives = 299/352 (84.94%), Query Frame = 0


Query: 1   MSRSQEPPHRLFFPFGNPFRARTPKGSKLSSKLVFLLATFEDSLAEGLIKLTPKSENDIL 60
           MS+ QE PHR FF FGNPFRA +PKGSKLSS+LVFLLATFEDSLA+ L KLTPKS++D+ 
Sbjct: 1   MSKPQE-PHRPFFHFGNPFRAISPKGSKLSSRLVFLLATFEDSLAQKLRKLTPKSDHDVF 60

Query: 61  SFSWMALAMKLLCETHKDVKTLIEELELPVSDWDEKWLDEYLDISLKLLDICNDFSSELS 120
           SF WM LAMKLLCE H DVKTLI +LELPVSDW EKWLDEYLDIS+KLLDICNDFSS+LS
Sbjct: 61  SFLWMGLAMKLLCEIHNDVKTLIGDLELPVSDWGEKWLDEYLDISVKLLDICNDFSSDLS 120

Query: 121 QLSQGHLVLRCALHNLASTSLNQFVHARSSLDGWNQHISNRTSRVKIHSPILDRLKESLD 180
           QL+QGHL+LRCALHNLASTS NQFV ARSSLD WNQHIS+RTSRV+  SPI+D  +E LD
Sbjct: 121 QLNQGHLILRCALHNLASTSSNQFVPARSSLDAWNQHISSRTSRVENRSPIMDHFEELLD 180

Query: 181 LPKVQKNSAKGKVLMHVMYGVKVVTLFICSVLASAFTGSSVSLLSINIPDTYRWAQAFTE 240
           LPKV KNS KGKVLM VMYGVKV TLFICSV A AF+GSS  LLSIN+PDTYRWAQAF E
Sbjct: 181 LPKV-KNSPKGKVLMQVMYGVKVATLFICSVFAYAFSGSSKRLLSINVPDTYRWAQAFIE 240

Query: 241 LQKNVN-------SSGRSTVLRERDAVDESVKKLHSMIQGNVDGGTKVEEFQNLVVDLGR 300
           LQKNVN       SSGR T LR+ +AVDE VKKLHSMIQ N+DGG KVEE QNL+VDL  
Sbjct: 241 LQKNVNMGIKINHSSGRFTALRDLNAVDERVKKLHSMIQENIDGGMKVEECQNLIVDLRS 300

Query: 301 EAEKLTQGVDHLTKQVDEFFHVVLSGRDALLSNLRESETVLDQGSGELRTRQ 346
           EAEKLTQGVDHLTKQVDEFF++VLSGRDALLSNLR SETV DQG   L TRQ
Sbjct: 301 EAEKLTQGVDHLTKQVDEFFYIVLSGRDALLSNLRSSETVFDQGMEALSTRQ 350

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BLAST of Carg24660 vs. TAIR10
Match: AT2G46080.1 (Protein BYPASS related (InterPro:IPR008511))

HSP 1 Score: 343.2 bits (879), Expect = 1.9e-94
Identity = 184/347 (53.03%), Postives = 248/347 (71.47%), Query Frame = 0


Query: 1   MSRSQEPPHRLFFPFGNPFRARTPKGSKLSSKLVFLLATFEDSLAEGLIKLTPKSENDIL 60
           MSR Q+PP R FFPFGNPFR  + KGS LS  L+ LL  FE  L E L KL PK+++DIL
Sbjct: 1   MSRPQDPP-RGFFPFGNPFRMLSSKGSDLSPWLLSLLNGFELRLEERLKKLMPKNKDDIL 60

Query: 61  SFSWMALAMKLLCETHKDVKTLIEELELPVSDWDEKWLDEYLDISLKLLDICNDFSSELS 120
           + SWM LAM+ LCETHK++ TLI +L+LPVSDW+EKW+D YL+IS++LLD+CN FSSEL+
Sbjct: 61  TLSWMKLAMESLCETHKNINTLITDLQLPVSDWEEKWVDVYLNISVRLLDLCNAFSSELT 120

Query: 121 QLSQGHLVLRCALHNLASTSLNQFVHARSSLDGWNQHISNRTSRVKIHSPILDRLKESLD 180
           +L+QG L L+C LHNL S S  +++ ARSSLD W QH++    R++    +LD L +SL 
Sbjct: 121 RLNQGDLFLKCVLHNLQSDSGEKYLQARSSLDSWRQHVNTNNPRIENCRAVLDSLVKSLS 180

Query: 181 LPKVQKNSAKGKVLMHVMYGVKVVTLFICSVLASAFTGSSVSLLSINIPDTYRWAQAFTE 240
           LPKV KNS KGKVLM   YGVKV T++ICSV  +A++ S+  L  + + +   WA+ FT+
Sbjct: 181 LPKV-KNSPKGKVLMRAFYGVKVQTVYICSVFTAAWSDSTKDLFDLPVSEKPLWAKVFTD 240

Query: 241 LQKNVN-------SSGRSTVLRERDAVDESVKKLHSMIQGNVDGGTKVEEFQNLVVDLGR 300
           +Q  VN       SSGR+T+L+E ++VD SV+KL+ MIQ  VD   +VE F++ V++LG 
Sbjct: 241 MQSVVNAEIRDMLSSGRTTILKELESVDASVEKLYPMIQDGVD-PVEVEFFKDNVMELGT 300

Query: 301 EAEKLTQGVDHLTKQVDEFFHVVLSGRDALLSNLRESETVLDQGSGE 341
           +AEKL+QG+D L ++VD FF + L GRD LL NLR S+++     GE
Sbjct: 301 QAEKLSQGLDQLLEEVDSFFKLTLRGRDVLLCNLRSSDSISGNAVGE 344

[Close]

BLAST of Carg24660 vs. TAIR10
Match: AT1G01550.1 (Protein of unknown function (DUF793))

HSP 1 Score: 307.4 bits (786), Expect = 1.1e-83
Identity = 171/335 (51.04%), Postives = 230/335 (68.66%), Query Frame = 0


Query: 1   MSRSQEPPHRLFFPFGNPFRARTPKGSKLSSKLVFLLATFEDSLAEGLIKLTPKSENDIL 60
           M+R Q+PP R FFPFGNPF+  + K S LSSKL+ LL  FE +LA  + KL PK ++DIL
Sbjct: 1   MARPQDPP-RGFFPFGNPFKNLSSKNSVLSSKLLPLLNNFETNLASSISKLVPKEKSDIL 60

Query: 61  SFSWMALAMKLLCETHKDVKTLIEELELPVSDWDEKWLDEYLDISLKLLDICNDFSSELS 120
           + SWM  AM+ LCETH  +KTLI +LELPVSDW++KW+D YLDIS+KLLD+CN FSSEL+
Sbjct: 61  TVSWMKQAMESLCETHNGIKTLITDLELPVSDWEDKWVDVYLDISVKLLDLCNAFSSELT 120

Query: 121 QLSQGHLVLRCALHNLASTSLNQFVHARSSLDGWNQHISNRTSRVKIHSPILDRLKESLD 180
           +L+QGHL+L+ ALHNL + S      A+SSLD W QHI ++  R++    IL  L ++L+
Sbjct: 121 RLNQGHLLLQFALHNLEANSPQNLSKAQSSLDSWKQHIVSKNPRIENCRAILSSLVQTLN 180

Query: 181 LPKVQKNSAKGKVLMHVMYGVKVVTLFICSVLASAFTGSSVSLLSINIPDTYRWAQAFTE 240
           LPKV KNSAKGKVLM  +YGVKV TL+I  V A+AF+GSS +L+ + + +   WAQ+F E
Sbjct: 181 LPKV-KNSAKGKVLMRALYGVKVKTLYISGVFAAAFSGSSQNLMYLTVSNELPWAQSFME 240

Query: 241 LQ-------KNVNSSGRSTVLRERDAVDESVKKLHSMIQGNVDGGTKVEEFQNLVVDLGR 300
           +Q       KN+  S   TVL+E +AV   VKKL+  IQ        ++  ++ V +   
Sbjct: 241 VQNTMNAEIKNIFLSDGLTVLKELEAVASGVKKLYPAIQQGSIDPISLQPLKDSVTE--- 300

Query: 301 EAEKLTQGVDHLTKQVDEFFHVVLSGRDALLSNLR 329
               L+ G+D ++K+VD FF ++LSGRD LL NLR
Sbjct: 301 ----LSNGIDLVSKEVDCFFKILLSGRDTLLENLR 326

[Close]

BLAST of Carg24660 vs. TAIR10
Match: AT4G01360.1 (unknown protein)

HSP 1 Score: 192.6 bits (488), Expect = 4.1e-49
Identity = 126/329 (38.30%), Postives = 191/329 (58.05%), Query Frame = 0


Query: 17  NPFRARTPK--GSKLSSKLVFLLATFEDSLAEGLIKLTPKSENDILSFSWMALAMKLLCE 76
           NPF+    K   ++LS KL+ LL  FE +L   + +L PK +NDI+S SWM  AM+ LCE
Sbjct: 10  NPFKILFTKKNNARLSPKLLSLLNNFETNLTVSIRELVPKDKNDIVSVSWMIQAMQSLCE 69

Query: 77  THKDVKTLIEELELPVSDWDEKWLDEYLDISLKLLDICNDFSSELSQLSQGHLVLRCALH 136
           THK ++TL+++LE+PVSD +E ++  + D SLK  ++CN F+SE+  L  G+L+L+ A  
Sbjct: 70  THKSIRTLVKDLEVPVSDLEENFIYIFSDFSLK-RELCNAFTSEIYHLEHGNLLLKFAFS 129

Query: 137 NLASTSLNQFVHARSSLDGWNQHISNRTSRVKIHSPILDRLKESLD------LPKVQKNS 196
            L + S N        L  WNQH+ ++   ++    +L RL ES+D          +K S
Sbjct: 130 KLETNSGN-------ILQRWNQHMVSKNPSIENWGAVLSRLVESMDHHHHISKKGKKKYS 189

Query: 197 AKGKVLMHVMYGVKVVTLFICSVLASAFTGSSVSLLSINIP---DTYRWAQAFTELQKNV 256
           A+GKVL+ V+YGVKV TL+I SV  ++F+GSS +L  + IP   +   W QAF ELQ  +
Sbjct: 190 AEGKVLLRVLYGVKVKTLYIFSVFDASFSGSSKNLFYLTIPKEMEELPWVQAFMELQNTI 249

Query: 257 NS-------SGRSTVLRERDAVDESVKKLHSMIQGNVDGGTKVEEFQNLVVDLGREAEKL 316
           N        S   TV+++ +AV+  VKKL++ +Q        VE  +  V++L    E +
Sbjct: 250 NPEIKNTFLSDGFTVIKDLEAVETGVKKLYTAVQEGSVPILLVEPLEKSVIELSERFELV 309

Query: 317 TQGVDHLTKQVDEFFHVVLSGRDALLSNL 328
           ++    L+K       +V+S RDALL +L
Sbjct: 310 SKETRCLSK-------MVISARDALLESL 323

[Close]

BLAST of Carg24660 vs. TAIR10
Match: AT3G61500.2 (unknown protein)

HSP 1 Score: 96.3 bits (238), Expect = 4.0e-20
Identity = 59/157 (37.58%), Postives = 87/157 (55.41%), Query Frame = 0


Query: 29  LSSKLVFLLATFEDSLAEGLIKLTPKSENDILSFSWMALAMKLLCETHKDVKTLIEELEL 88
           L  K   LL  FE SL E L KL P++ ++IL+  WM LAM+LL +TH D+  LI +L+L
Sbjct: 22  LFPKKNLLLNNFESSLTERLKKLIPQNTDEILTLPWMILAMELLYDTHNDINILITDLKL 81

Query: 89  PVSDWDEK--WLDEYLDISLKLLDICNDFSSELSQLSQGHLVLRCALHNLASTSLNQFVH 148
                 E   W + Y++I+ KLLD+CN F S L  ++ G + L+   H L   S +    
Sbjct: 82  HYMTDSEHGYWFENYMNINTKLLDLCNAFMSLLRHMNHGIVCLKFLRHKLEMKSEDLCTE 141

Query: 149 ARSSLDGWNQHISNRTSRVKIHSPILDRLKESLDLPK 184
             S+LD W ++I+   S+ +    +L R  ESL+  K
Sbjct: 142 ICSALDSWRENITAEISKCR---EVLGRYVESLNFHK 175

[Close]

BLAST of Carg24660 vs. TAIR10
Match: AT1G22030.1 (Protein BYPASS related (InterPro:IPR008511))

HSP 1 Score: 47.4 bits (111), Expect = 2.1e-05
Identity = 25/66 (37.88%), Postives = 40/66 (60.61%), Query Frame = 0


Query: 57  NDILSFSWMALAMKLLCETHKDVKTLIEELELPVSDWDEKWLDEYLDISLKLLDICNDFS 116
           N+ +S  ++  A+ LL  +H  +  L+++L+LPV D   KWLDEY+D S KL + C    
Sbjct: 30  NNFMSVHFLQRALCLLRTSHSHLTLLVQKLQLPVGD---KWLDEYMDESSKLWEACLVIK 89

Query: 117 SELSQL 123
           S +S +
Sbjct: 90  SAVSSV 92

[Close]

BLAST of Carg24660 vs. Swiss-Prot
Match: sp|Q9LMM6|BPS1_ARATH (Protein BPS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BPS1 PE=2 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 2.0e-82
Identity = 171/335 (51.04%), Postives = 230/335 (68.66%), Query Frame = 0


Query: 1   MSRSQEPPHRLFFPFGNPFRARTPKGSKLSSKLVFLLATFEDSLAEGLIKLTPKSENDIL 60
           M+R Q+PP R FFPFGNPF+  + K S LSSKL+ LL  FE +LA  + KL PK ++DIL
Sbjct: 1   MARPQDPP-RGFFPFGNPFKNLSSKNSVLSSKLLPLLNNFETNLASSISKLVPKEKSDIL 60

Query: 61  SFSWMALAMKLLCETHKDVKTLIEELELPVSDWDEKWLDEYLDISLKLLDICNDFSSELS 120
           + SWM  AM+ LCETH  +KTLI +LELPVSDW++KW+D YLDIS+KLLD+CN FSSEL+
Sbjct: 61  TVSWMKQAMESLCETHNGIKTLITDLELPVSDWEDKWVDVYLDISVKLLDLCNAFSSELT 120

Query: 121 QLSQGHLVLRCALHNLASTSLNQFVHARSSLDGWNQHISNRTSRVKIHSPILDRLKESLD 180
           +L+QGHL+L+ ALHNL + S      A+SSLD W QHI ++  R++    IL  L ++L+
Sbjct: 121 RLNQGHLLLQFALHNLEANSPQNLSKAQSSLDSWKQHIVSKNPRIENCRAILSSLVQTLN 180

Query: 181 LPKVQKNSAKGKVLMHVMYGVKVVTLFICSVLASAFTGSSVSLLSINIPDTYRWAQAFTE 240
           LPKV KNSAKGKVLM  +YGVKV TL+I  V A+AF+GSS +L+ + + +   WAQ+F E
Sbjct: 181 LPKV-KNSAKGKVLMRALYGVKVKTLYISGVFAAAFSGSSQNLMYLTVSNELPWAQSFME 240

Query: 241 LQ-------KNVNSSGRSTVLRERDAVDESVKKLHSMIQGNVDGGTKVEEFQNLVVDLGR 300
           +Q       KN+  S   TVL+E +AV   VKKL+  IQ        ++  ++ V +   
Sbjct: 241 VQNTMNAEIKNIFLSDGLTVLKELEAVASGVKKLYPAIQQGSIDPISLQPLKDSVTE--- 300

Query: 301 EAEKLTQGVDHLTKQVDEFFHVVLSGRDALLSNLR 329
               L+ G+D ++K+VD FF ++LSGRD LL NLR
Sbjct: 301 ----LSNGIDLVSKEVDCFFKILLSGRDTLLENLR 326

[Close]

BLAST of Carg24660 vs. Swiss-Prot
Match: sp|Q337C0|U496D_ORYSJ (UPF0496 protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0513300 PE=2 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 1.9e-56
Identity = 133/320 (41.56%), Postives = 186/320 (58.13%), Query Frame = 0


Query: 1   MSRSQEPPHRLFFPFGNPFRARTPKGSKLSSKLVFLLATFEDSLAEGLIKLTPKSENDIL 60
           MSR+   P R FFP GNPFR   P G+ LS KL  LLA++ED+LA  L KL P++ +D+L
Sbjct: 1   MSRAHGSP-RSFFPVGNPFRVMFPGGAHLSRKLQELLASYEDALALSLRKLKPEAASDVL 60

Query: 61  SFSWMALAMKLLCETHKDVKTLIEELELPVSDWDEKWLDEYLDISLKLLDICNDFSSELS 120
           + SWM LA+  L E H ++  LI +LELPVSDWD+KW+D YL+ S+KLLDIC   SSELS
Sbjct: 61  TLSWMRLAVDCLSELHTNIANLITDLELPVSDWDDKWVDIYLNSSVKLLDICIALSSELS 120

Query: 121 QLSQGHLVLRCALHNLAS----TSLNQFVHARSSLDGWNQHISNRTSRVKIHSPILDRLK 180
           +L QG L+L+ ALH L S     S  Q   A  SL  W + +  R +R+   S  L  L 
Sbjct: 121 RLDQGQLLLQYALHVLGSESGVPSQEQLKRAEPSLREWMELVGVRCARLVSCSATLQELA 180

Query: 181 ESLDLPKVQKNSAKGKVLMHVMYGVKVVTLFICSVLASAFTGSSVSLLSINIPDTYRWAQ 240
            +L L KV KNSAKGKVLM  +YG++ VT+F+CS+  +  +GS   L+ +++P+ + W+Q
Sbjct: 181 GNLSLMKV-KNSAKGKVLMRALYGIESVTVFVCSIFVAVLSGSPKPLVELHVPEKFGWSQ 240

Query: 241 AFTELQKNVN-------SSGRSTVLRERDAVDESVKKLHSMIQGNVDGGTKVEEFQNLVV 300
           AF +L   V+       S G    ++E + V+   ++LH +   +               
Sbjct: 241 AFNDLHTAVSEELTRQLSGGSVAAVKELEEVEACARRLHVLASTS--------------- 300

Query: 301 DLGREAEKLTQGVDHLTKQV 310
            L  EA  L   V H  ++V
Sbjct: 301 QLEEEAANLANAVSHTEEEV 303

[Close]

BLAST of Carg24660 vs. Swiss-Prot
Match: sp|A2Z9A6|U496D_ORYSI (UPF0496 protein 4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_033149 PE=3 SV=2)

HSP 1 Score: 218.8 bits (556), Expect = 9.6e-56
Identity = 132/320 (41.25%), Postives = 184/320 (57.50%), Query Frame = 0


Query: 1   MSRSQEPPHRLFFPFGNPFRARTPKGSKLSSKLVFLLATFEDSLAEGLIKLTPKSENDIL 60
           MSR+   P R FFP GNPFR   P G+ LS KL  LLA++ED+LA  L KL P++ +D+L
Sbjct: 1   MSRAHGSP-RSFFPVGNPFRVMFPGGAHLSRKLQELLASYEDALALSLRKLKPEAASDVL 60

Query: 61  SFSWMALAMKLLCETHKDVKTLIEELELPVSDWDEKWLDEYLDISLKLLDICNDFSSELS 120
           + SWM LA+  L E H ++  LI +LELPVSDWD+KW+D YL+ S+KLLDIC   SSELS
Sbjct: 61  TLSWMRLAVDCLSELHTNIANLITDLELPVSDWDDKWVDIYLNSSVKLLDICIALSSELS 120

Query: 121 QLSQGHLVLRCALHNLAS----TSLNQFVHARSSLDGWNQHISNRTSRVKIHSPILDRLK 180
           +L QG L+L+ ALH L S     S  Q   A  SL  W + +  R  R+   S  L  L 
Sbjct: 121 RLDQGQLLLQYALHVLGSESGVPSQEQLKRAEPSLREWMELVGVRCPRLVSCSATLQELA 180

Query: 181 ESLDLPKVQKNSAKGKVLMHVMYGVKVVTLFICSVLASAFTGSSVSLLSINIPDTYRWAQ 240
            +L L KV KNS KGKVLM  +YG++ VT+F+CS+  +  +GS   L+ +++P+ + W+Q
Sbjct: 181 GNLSLMKV-KNSVKGKVLMRALYGIESVTVFVCSIFVAVLSGSPKPLVELHVPEKFGWSQ 240

Query: 241 AFTELQKNVN-------SSGRSTVLRERDAVDESVKKLHSMIQGNVDGGTKVEEFQNLVV 300
           AF +L   V+       + G    ++E + V+   K+LH +   +               
Sbjct: 241 AFNDLHTAVSEELTRQLAGGSVAAVKELEEVEACAKRLHVLASTS--------------- 300

Query: 301 DLGREAEKLTQGVDHLTKQV 310
            L  EA  L   V H  ++V
Sbjct: 301 QLEEEAANLANAVSHTEEEV 303

[Close]

BLAST of Carg24660 vs. TrEMBL
Match: tr|A0A1S3AVG0|A0A1S3AVG0_CUCME (protein BPS1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103483255 PE=4 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 6.1e-140
Identity = 273/353 (77.34%), Postives = 298/353 (84.42%), Query Frame = 0


Query: 1   MSRSQEPPHRLFFPFGNPFRARTPKGSKLSSKLVFLLATFEDSLAEGLIKLTPKSENDIL 60
           MS+ QE PHR FFPFGNPFRA +PKG+K+SS+LVFLLATFEDSLAE L KLTPKSENDIL
Sbjct: 1   MSKPQE-PHRPFFPFGNPFRAISPKGAKVSSRLVFLLATFEDSLAERLKKLTPKSENDIL 60

Query: 61  SFSWMALAMKLLCETHKDVKTLIEELELPVSDWDEKWLDEYLDISLKLLDICNDFSSELS 120
           SFSWM LAMKLL ETH +VKTLIEEL  PVS+WDEKWLDEYL+IS+KLLDICNDFSSELS
Sbjct: 61  SFSWMELAMKLLRETHNNVKTLIEELGFPVSEWDEKWLDEYLNISVKLLDICNDFSSELS 120

Query: 121 QLSQGHLVLRCALHNLASTSLNQFVHARSSLDGWNQHISNRTSRVKIHSPILDRLKESLD 180
           QL+QGHL+LRCALHNL STS NQ V A SSLD WNQHIS+RTSRV   SPILD LKESLD
Sbjct: 121 QLNQGHLILRCALHNLESTSSNQSVRAPSSLDAWNQHISSRTSRVDSGSPILDGLKESLD 180

Query: 181 LPKVQKNSAKGKVLMHVMYGVKVVTLFICSVLASAFTGSSVSLLSINIPDTYRWAQAFTE 240
           LPKV KNS+KGKVLMH +YGVKVVTLFICSV AS+F+GSS  LL  N+PD++RWA AFTE
Sbjct: 181 LPKV-KNSSKGKVLMHALYGVKVVTLFICSVFASSFSGSSEWLLPTNVPDSFRWASAFTE 240

Query: 241 LQKNVN-------SSGRSTVLRERDAVDESVKKLHSMIQGNVDGGTKVEEFQNLVVDLGR 300
           LQK VN       SSGR T LR+ DAV+E VKKLHSMIQGN+D     EEFQNL+V+L R
Sbjct: 241 LQKYVNMEIKKIYSSGRFTALRDVDAVNERVKKLHSMIQGNMDDCK--EEFQNLIVELRR 300

Query: 301 EAEKLTQGVDHLTKQVDEFFHVVLSGRDALLSNLRESETVLDQGSGELRTRQL 347
           EAE LTQGVDHLTKQVDEFFH+VLSGRD LLSNLR SETV  QG G L TRQL
Sbjct: 301 EAENLTQGVDHLTKQVDEFFHIVLSGRDELLSNLRASETVFAQGMGGLCTRQL 349

[Close]

BLAST of Carg24660 vs. TrEMBL
Match: tr|A0A0A0L3G5|A0A0A0L3G5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G121710 PE=4 SV=1)

HSP 1 Score: 497.3 bits (1279), Expect = 2.8e-137
Identity = 268/353 (75.92%), Postives = 294/353 (83.29%), Query Frame = 0


Query: 1   MSRSQEPPHRLFFPFGNPFRARTPKGSKLSSKLVFLLATFEDSLAEGLIKLTPKSENDIL 60
           MS+ QE PHR FFPFGNPFRA +PKG+K+SS+L FLLATFEDSLAE L KLTPKSENDIL
Sbjct: 1   MSKPQE-PHRPFFPFGNPFRAISPKGAKVSSRLSFLLATFEDSLAERLKKLTPKSENDIL 60

Query: 61  SFSWMALAMKLLCETHKDVKTLIEELELPVSDWDEKWLDEYLDISLKLLDICNDFSSELS 120
           SFSWM LAMKLL ETH DVKTL+EEL  PVS+WDEKWLDEYL+IS+KLLDICNDFSSELS
Sbjct: 61  SFSWMELAMKLLRETHNDVKTLVEELGFPVSEWDEKWLDEYLNISVKLLDICNDFSSELS 120

Query: 121 QLSQGHLVLRCALHNLASTSLNQFVHARSSLDGWNQHISNRTSRVKIHSPILDRLKESLD 180
           QL+QGHL+LRCALHNL STS NQ V A SSLD WNQHIS+RTSRV    PILD L ESLD
Sbjct: 121 QLNQGHLILRCALHNLESTSSNQSVRAPSSLDAWNQHISSRTSRVDSCYPILDSLGESLD 180

Query: 181 LPKVQKNSAKGKVLMHVMYGVKVVTLFICSVLASAFTGSSVSLLSINIPDTYRWAQAFTE 240
           LPKV KNS+KGKVLMHV+Y VKVVTLFICSV AS+F+GSS  LL  N+PD++RWA AFTE
Sbjct: 181 LPKV-KNSSKGKVLMHVLYAVKVVTLFICSVFASSFSGSSEWLLPTNVPDSFRWASAFTE 240

Query: 241 LQKNVN-------SSGRSTVLRERDAVDESVKKLHSMIQGNVDGGTKVEEFQNLVVDLGR 300
           LQK VN       SSGR T LR+ DAV+E VKKLHSMIQGN+D     EEFQNL+V+L R
Sbjct: 241 LQKYVNMEIKKIYSSGRFTALRDVDAVNERVKKLHSMIQGNMDDCK--EEFQNLIVELRR 300

Query: 301 EAEKLTQGVDHLTKQVDEFFHVVLSGRDALLSNLRESETVLDQGSGELRTRQL 347
           EAE LTQGVDHLTKQVDEFFH+VLSGRD LLSNLR +E V  QG G L TRQL
Sbjct: 301 EAENLTQGVDHLTKQVDEFFHIVLSGRDELLSNLRANEAVFSQGMGGLCTRQL 349

[Close]

BLAST of Carg24660 vs. TrEMBL
Match: tr|A0A2N9F5D5|A0A2N9F5D5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10177 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 3.4e-106
Identity = 216/342 (63.16%), Postives = 254/342 (74.27%), Query Frame = 0


Query: 1   MSRSQEPPHRLFFPFGNPFRARTPKGSKLSSKLVFLLATFEDSLAEGLIKLTPKSENDIL 60
           MSR  E  H  FF FGNPFR  + KGS LS +L  LL  FE++LA  L KL+PK ++++L
Sbjct: 1   MSRPHE-QHHPFFSFGNPFRMISSKGSNLSQRLFSLLNKFEETLAGRLRKLSPKDQDEVL 60

Query: 61  SFSWMALAMKLLCETHKDVKTLIEELELPVSDWDEKWLDEYLDISLKLLDICNDFSSELS 120
           S SWM LAM+ LCETH D+KTLI ELELPV DWDEKW+D YLDIS+ LLDIC  FSSE+S
Sbjct: 61  SLSWMKLAMESLCETHNDIKTLITELELPVCDWDEKWIDVYLDISVNLLDICIAFSSEIS 120

Query: 121 QLSQGHLVLRCALHNLASTSLNQFVHARSSLDGWNQHISNRTSRVKIHSPILDRLKESLD 180
           +L+QGHL+L+C LHNL STS  QF+ ARSSLDGW QHIS++  RV+    IL++L ESLD
Sbjct: 121 RLNQGHLLLQCVLHNLDSTSSKQFIKARSSLDGWRQHISSKNPRVESCCTILNKLVESLD 180

Query: 181 LPKVQKNSAKGKVLMHVMYGVKVVTLFICSVLASAFTGSSVSLLSINIPDTYRWAQAFTE 240
           LPKV KNS KGKVLM  MYG KV T+F+CSV A+AF+GS   LL+IN+ D Y WAQAFT 
Sbjct: 181 LPKV-KNSVKGKVLMRAMYGAKVETVFVCSVFAAAFSGSGKKLLNINVADKYIWAQAFTG 240

Query: 241 LQKNVN-------SSGRSTVLRERDAVDESVKKLHSMIQGNVDGGTKVEEFQNLVVDLGR 300
           LQ +VN       SS R TVL+E +AVD SVKKL+ MIQ  VD   KVE FQN V DL R
Sbjct: 241 LQTSVNGEIRNVFSSERFTVLKELEAVDTSVKKLYPMIQDGVD-PVKVEAFQNSVSDLAR 300

Query: 301 EAEKLTQGVDHLTKQVDEFFHVVLSGRDALLSNLRESETVLD 336
            AE L+QG+D LTK+VD FFHVVL+GRD LL NLRES T  D
Sbjct: 301 RAEGLSQGLDLLTKEVDGFFHVVLAGRDTLLGNLRESSTGSD 339

[Close]

BLAST of Carg24660 vs. TrEMBL
Match: tr|A0A2H5PGH9|A0A2H5PGH9_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_134340 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 1.7e-105
Identity = 212/342 (61.99%), Postives = 257/342 (75.15%), Query Frame = 0


Query: 1   MSRSQEPPHRLFFPFGNPFRARTPKGSKLSSKLVFLLATFEDSLAEGLIKLTPKSENDIL 60
           MSR Q+ PHR FFPFGNPFR  +PKGS+LS KLV LLA FE++LAE L KL PK ++DIL
Sbjct: 8   MSRPQD-PHRPFFPFGNPFRMMSPKGSRLSPKLVSLLADFEETLAERLRKLMPKDKDDIL 67

Query: 61  SFSWMALAMKLLCETHKDVKTLIEELELPVSDWDEKWLDEYLDISLKLLDICNDFSSELS 120
           + SWM LAM+ LCETH  +K LI ELELPVSDWDEKW+D YLDIS+ LLDIC  FSS L+
Sbjct: 68  NLSWMRLAMESLCETHNVIKDLITELELPVSDWDEKWIDVYLDISVNLLDICIAFSSVLT 127

Query: 121 QLSQGHLVLRCALHNLASTSLNQFVHARSSLDGWNQHISNRTSRVKIHSPILDRLKESLD 180
           ++SQGHL+L+C LH L S+S  QF  ARSSLD W +HIS++  RV+    ILD L  SLD
Sbjct: 128 KVSQGHLLLQCVLHTLDSSSPTQFGRARSSLDNWREHISSKNPRVESCRSILDNLVASLD 187

Query: 181 LPKVQKNSAKGKVLMHVMYGVKVVTLFICSVLASAFTGSSVSLLSINIPDTYRWAQAFTE 240
           LPKV KNSAKGKVLM  MYGVKV+T+F+CS+ A+AF+GS+ +LL +N+ DT  WA AF+ 
Sbjct: 188 LPKV-KNSAKGKVLMRAMYGVKVLTVFVCSIFAAAFSGSAKNLLELNVSDTLPWAPAFSA 247

Query: 241 LQKNVN-------SSGRSTVLRERDAVDESVKKLHSMIQGNVDGGTKVEEFQNLVVDLGR 300
           LQ NVN       SSGR+TVL E +AVD SVKKL+ +IQ  VD   + E  Q  V+DLG+
Sbjct: 248 LQANVNAEVRNILSSGRATVLNELEAVDGSVKKLYEVIQNEVD-TVEEELLQKSVLDLGK 307

Query: 301 EAEKLTQGVDHLTKQVDEFFHVVLSGRDALLSNLRESETVLD 336
            A+ L+QG+DHLTK VD FF +VLSGRDALL NLR + T  D
Sbjct: 308 RADNLSQGLDHLTKAVDGFFKIVLSGRDALLCNLRATGTAPD 346

[Close]

BLAST of Carg24660 vs. TrEMBL
Match: tr|A0A2P4JSI4|A0A2P4JSI4_QUESU (Protein bps1, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_06057 PE=4 SV=1)

HSP 1 Score: 390.6 bits (1002), Expect = 3.7e-105
Identity = 214/346 (61.85%), Postives = 256/346 (73.99%), Query Frame = 0


Query: 1   MSRSQEPPHRLFFPFGNPFRARTPKGSKLSSKLVFLLATFEDSLAEGLIKLTPKSENDIL 60
           MSR  + PH  FF FGNPFR  +PKGS LS +L+ LL  FE++LA  L KL PK ++ +L
Sbjct: 1   MSRPHDLPHP-FFHFGNPFRMISPKGSNLSKRLLLLLNNFEETLAGRLRKLNPKDKDGVL 60

Query: 61  SFSWMALAMKLLCETHKDVKTLIEELELPVSDWDEKWLDEYLDISLKLLDICNDFSSELS 120
           S SWM LAM  LCETH D+KTLI  LELPV DWDEKW+D YLDIS+ LLDICN FSSE+S
Sbjct: 61  SLSWMKLAMLSLCETHNDIKTLIAGLELPVCDWDEKWIDAYLDISVNLLDICNAFSSEIS 120

Query: 121 QLSQGHLVLRCALHNLASTSLNQFVHARSSLDGWNQHISNRTSRVKIHSPILDRLKESLD 180
           +L+QGHL+L+C LHNL S+S  QF+ ARSSLD W QHIS++  RV+  S IL++L  SL+
Sbjct: 121 RLNQGHLLLQCVLHNLDSSSSKQFIKARSSLDAWRQHISSKNPRVENCSTILNKLGGSLN 180

Query: 181 LPKVQKNSAKGKVLMHVMYGVKVVTLFICSVLASAFTGSSVSLLSINIPDTYRWAQAFTE 240
           LPKV KNSAKGKVLM  MYGVKV T+FICSV ASAF+GS+  L  +N+   Y WA+AFT 
Sbjct: 181 LPKV-KNSAKGKVLMRAMYGVKVETVFICSVFASAFSGSARKLFDLNVDGKYMWAEAFTG 240

Query: 241 LQKNVN-------SSGRSTVLRERDAVDESVKKLHSMIQGNVDGGTKVEEFQNLVVDLGR 300
           LQ ++N       SSGR TVL+E + VD SVKKL+ MIQ  VD   +VE F+N V DL R
Sbjct: 241 LQTSINSEIRNLYSSGRFTVLKELETVDTSVKKLYPMIQDGVD-PVEVEAFKNSVSDLAR 300

Query: 301 EAEKLTQGVDHLTKQVDEFFHVVLSGRDALLSNLRESETVLDQGSG 340
            AE L+QG+D LTK+VD FFHVVL+GRDALL NLRES TV D   G
Sbjct: 301 RAEGLSQGLDLLTKEVDGFFHVVLTGRDALLCNLRESGTVSDTKLG 343

The following BLAST results are available for this feature:

BLAST of Carg24660 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935440.1	1.2e-187	98.27	protein BPS1, chloroplastic-like [Cucurbita moschata]	[more]
XP_023539967.1	7.9e-184	96.53	protein BPS1, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022974571.1	5.3e-180	95.38	protein BPS1, chloroplastic-like [Cucurbita maxima]	[more]
XP_022979340.1	5.6e-145	78.98	protein BPS1, chloroplastic-like [Cucurbita maxima]	[more]
XP_022924524.1	3.6e-144	78.13	protein BPS1, chloroplastic-like isoform X2 [Cucurbita moschata]	[more]

BLAST of Carg24660 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G46080.1	1.9e-94	53.03	Protein BYPASS related (InterPro:IPR008511)	[more]
AT1G01550.1	1.1e-83	51.04	Protein of unknown function (DUF793)	[more]
AT4G01360.1	4.1e-49	38.30	unknown protein	[more]
AT3G61500.2	4.0e-20	37.58	unknown protein	[more]
AT1G22030.1	2.1e-05	37.88	Protein BYPASS related (InterPro:IPR008511)	[more]

BLAST of Carg24660 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LMM6\|BPS1_ARATH	2.0e-82	51.04	Protein BPS1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=BPS1 PE=2 SV=1	[more]
sp\|Q337C0\|U496D_ORYSJ	1.9e-56	41.56	UPF0496 protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0513300 PE=2 ...	[more]
sp\|A2Z9A6\|U496D_ORYSI	9.6e-56	41.25	UPF0496 protein 4 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_033149 PE=3 SV=2	[more]

BLAST of Carg24660 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AVG0\|A0A1S3AVG0_CUCME	6.1e-140	77.34	protein BPS1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103483255 PE=4 SV...	[more]
tr\|A0A0A0L3G5\|A0A0A0L3G5_CUCSA	2.8e-137	75.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G121710 PE=4 SV=1	[more]
tr\|A0A2N9F5D5\|A0A2N9F5D5_FAGSY	3.4e-106	63.16	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10177 PE=4 SV=1	[more]
tr\|A0A2H5PGH9\|A0A2H5PGH9_CITUN	1.7e-105	61.99	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_134340 PE=4 SV=1	[more]
tr\|A0A2P4JSI4\|A0A2P4JSI4_QUESU	3.7e-105	61.85	Protein bps1, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_06057 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004320	DUF241_pln

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24660-RA	Carg24660-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004320	Protein of unknown function DUF241, plant	PFAM	PF03087	DUF241	coord: 94..307 e-value: 1.1E-8 score: 35.2
None	No IPR available	PANTHER	PTHR31509	FAMILY NOT NAMED	coord: 8..332
None	No IPR available	PANTHER	PTHR31509:SF3	BYPASS1-RELATED PROTEIN-RELATED	coord: 8..332

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24660	Cla021217	Watermelon (97103) v1	carwmB0378
Carg24660	Csa3G121710	Cucumber (Chinese Long) v2	carcuB0414
Carg24660	MELO3C006091	Melon (DHL92) v3.5.1	carmeB0389
Carg24660	ClCG05G001350	Watermelon (Charleston Gray)	carwcgB0376
Carg24660	CSPI03G08600	Wild cucumber (PI 183967)	carcpiB0417
Carg24660	Cucsa.258560	Cucumber (Gy14) v1	carcgyB0447
Carg24660	CmaCh06G010790	Cucurbita maxima (Rimu)	carcmaB0535
Carg24660	CmaCh14G020580	Cucurbita maxima (Rimu)	carcmaB0534
Carg24660	CmoCh06G011030	Cucurbita moschata (Rifu)	carcmoB0521
Carg24660	CmoCh14G021200	Cucurbita moschata (Rifu)	carcmoB0520
Carg24660	Lsi05G020580	Bottle gourd (USVL1VR-Ls)	carlsiB350
Carg24660	Cp4.1LG03g16510	Cucurbita pepo (Zucchini)	carcpeB0536
Carg24660	Cp4.1LG08g01410	Cucurbita pepo (Zucchini)	carcpeB0537
Carg24660	CsGy3G008690	Cucumber (Gy14) v2	carcgybB0392
Carg24660	MELO3C006091.2	Melon (DHL92) v3.6.1	carmedB0393
Carg24660	CsaV3_3G008740	Cucumber (Chinese Long) v3	carcucB0417
Carg24660	Cla97C05G081680	Watermelon (97103) v2	carwmbB0405

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg24660	Carg20986	Silver-seed gourd	carcarB409

The following block(s) are covering this gene:


Gene	Organism	Block
Carg24660	Wax gourd	carwgoB0469