Carg24652 (gene) Silver-seed gourd

Overview
NameCarg24652
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionMesoderm development candidate 2
LocationCucurbita_argyrosperma_scaffold_269 : 111261 .. 113253 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAATTTGCTTCTCACCTTCATCGCTTCTACCAGTCTTCTTTCTGATCGTCCTCACCGCCGGCATTTTCAAGGATGTCGGATTCAATCGCTTTGCCGAAGGTGGACAGCGGAGAATCCACATTACAGATGATCTCGACGACGTGGTTGACGATGAAGAGGACGAATCTTGGAAGGAATGGGGCAAGAAAAAGTCTGCCTCTAGCGATTTCGACCTCCCGCCGCCTGATTTATCGAAGATGGAGCTTCCGGAGATCCAGGCTGAGATGATGAAGCGGCAATCTGGTCCAACTATGGGATTTGTGAAGCTTCGGCTCGGCGTTCGTCGGACTCCGGTAAGAAATTTCGCCAATCTCCCTTACTGAGATGCTAATTCAATTCCGGAAAGTTATGGATAATTTAACTGCTGCTGGTCAAATTGGTTCCGGTTTATTTGATGAAATGATTTTTGAATTCGAATGCATGTCGAATTTTGCGACAGGGAGTTTATGTAAACGGATGCCAAGGTTGAAACGAGAAAACCTTGAAAATCTCGATTGTTTTGTATTTTCTGTTAATTGAACGCGTATATAGCTCCTAATTGAAAAATTCGGAGACTAACGTCTTCACATGATCACGTTTTACCAGCATTTATCACTATTGATTGATTTCAGGAGATGGTGGGTACGATTGCAATGCAATGGACGAGAATTCTGAAAACTGGATCAATCGAGGCAAAATTTATGGCGGTAGACCTCAGTACACTCATGTTCACAGTGGACAGAGGACAAGACTTGGATGAGGTACTTTAATTACCCGATTCTGGAACTGAAACTCCTCAATTGCTCTCCAATTCGCCTGGAAAATATTTTTTACTCCCAGATTTTGGCTTCTTTATGGGATCCAATCAAAAGCCTAACCCCCATTCCAATCATGTAGTTCAAGTCCTACAGTCTTGGATCATTTTAATTTTGTCATTGAAGTTCGATCTTAAATTTTGTGAACTCCTGATGTTGTTTCTGCATTATCATAACCGTCCCATATAGATTGGATAGGCATAATGAGATGAACAGATTAGGAGGCTGCTACATTGTGGCTGGTTCAAATCTGTCAGCCACAATGTGACGGTTTTCTAACAAATTATCGATGAAATGACAATTCTAGAAATGTATTTTGATCCCATGAGAAAAAATCACATTAGAATATCAGTCGAAACCCTTTTGTTATTGTTCTTACATGTTTTTCCTCCTAAATTTACTCTTCCATATGCAAATTTTAGTGTTTCTCATTGTTCATGGCTCAAATTTATGGTACAAAAAGCCAACAAAAATGAAAATGTTATACCAAGAACATCATCCTCATACCTAGTTTTGATCAAATTTGTTCTAGGGTGTTCTCTGTTTTCACTTTCAGAAATCCACCCATCAAACAAAACTCTCCGAGTAGGAAAAAACAGTTCATTCTTTGTAAAAATGGCAGGGAGTTCCTCATCACATCTTTTGAAATTCAGTTCTTGTTTCTCAACATTTTTTGTTTAAATGTTCTTTCAGTTAAAGGAGTTTGTGTTTAGCCATCCCGAATCGTACGAGATCAAAATTGGGGAGCAAGCATTTCGAAGACCTGGAGATCCTCCTGTTGAGGAAGTCATTGAGATGCTCCAAAAGGATAAGAACAAAGCTGATGACACCAATCCTTCAGAAGATACCGAGCCATTGCATCAAGAATTATAGAACCAATATGGTATCAATCTCCAGCCTTCAAACTGGGATTTTTGGATTTCTTAATCTGTTTAGCTTTTCAATCTTGTTGTAGCAATTGAATGGAAATTACTGCAAAAATAAGTTCTTGCCCCTTATTACATAGGAATTATTGTCCATAGACCCCTGGGGACTCTAGGATTTTGCTCTCCAGTCCCTGTATTTGGGCTTCTTTTTTCATTCGGGTATTTGATTTTTAAATATTATTTTGGTCCGTGTATTATTAGGTCTCATTCCATTTTAGTCCGTGCAAACT

mRNA sequence

ATGAGAATTTGCTTCTCACCTTCATCGCTTCTACCAGTCTTCTTTCTGATCGTCCTCACCGCCGGCATTTTCAAGGATGTCGGATTCAATCGCTTTGCCGAAGGTGGACAGCGGAGAATCCACATTACAGATGATCTCGACGACGTGGTTGACGATGAAGAGGACGAATCTTGGAAGGAATGGGGCAAGAAAAAGTCTGCCTCTAGCGATTTCGACCTCCCGCCGCCTGATTTATCGAAGATGGAGCTTCCGGAGATCCAGGCTGAGATGATGAAGCGGCAATCTGGTCCAACTATGGGATTTGTGAAGCTTCGGCTCGGCGTTCGTCGGACTCCGGAGATGGTGGGTACGATTGCAATGCAATGGACGAGAATTCTGAAAACTGGATCAATCGAGGCAAAATTTATGGCGGTAGACCTCAGTACACTCATGTTCACAGTGGACAGAGGACAAGACTTGGATGAGTTAAAGGAGTTTGTGTTTAGCCATCCCGAATCGTACGAGATCAAAATTGGGGAGCAAGCATTTCGAAGACCTGGAGATCCTCCTGTTGAGGAAGTCATTGAGATGCTCCAAAAGGATAAGAACAAAGCTGATGACACCAATCCTTCAGAAGATACCGAGCCATTGCATCAAGAATTATAGAACCAATATGGTATCAATCTCCAGCCTTCAAACTGGGATTTTTGGATTTCTTAATCTGTTTAGCTTTTCAATCTTGTTGTAGCAATTGAATGGAAATTACTGCAAAAATAAGTTCTTGCCCCTTATTACATAGGAATTATTGTCCATAGACCCCTGGGGACTCTAGGATTTTGCTCTCCAGTCCCTGTATTTGGGCTTCTTTTTTCATTCGGGTATTTGATTTTTAAATATTATTTTGGTCCGTGTATTATTAGGTCTCATTCCATTTTAGTCCGTGCAAACT

Coding sequence (CDS)

ATGAGAATTTGCTTCTCACCTTCATCGCTTCTACCAGTCTTCTTTCTGATCGTCCTCACCGCCGGCATTTTCAAGGATGTCGGATTCAATCGCTTTGCCGAAGGTGGACAGCGGAGAATCCACATTACAGATGATCTCGACGACGTGGTTGACGATGAAGAGGACGAATCTTGGAAGGAATGGGGCAAGAAAAAGTCTGCCTCTAGCGATTTCGACCTCCCGCCGCCTGATTTATCGAAGATGGAGCTTCCGGAGATCCAGGCTGAGATGATGAAGCGGCAATCTGGTCCAACTATGGGATTTGTGAAGCTTCGGCTCGGCGTTCGTCGGACTCCGGAGATGGTGGGTACGATTGCAATGCAATGGACGAGAATTCTGAAAACTGGATCAATCGAGGCAAAATTTATGGCGGTAGACCTCAGTACACTCATGTTCACAGTGGACAGAGGACAAGACTTGGATGAGTTAAAGGAGTTTGTGTTTAGCCATCCCGAATCGTACGAGATCAAAATTGGGGAGCAAGCATTTCGAAGACCTGGAGATCCTCCTGTTGAGGAAGTCATTGAGATGCTCCAAAAGGATAAGAACAAAGCTGATGACACCAATCCTTCAGAAGATACCGAGCCATTGCATCAAGAATTATAG

Protein sequence

MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVVDDEEDESWKEWGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL
Homology
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BLAST of Carg24652 vs. NCBI nr
Match: XP_022942170.1 (uncharacterized protein LOC111447309 [Cucurbita moschata])

HSP 1 Score: 410.2 bits (1053), Expect = 4.2e-111
Identity = 213/214 (99.53%), Postives = 213/214 (99.53%), Query Frame = 0 

Query: 1   MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVXXXXXXXSWKE 60
           MRICFSPSSLLPVFFLIVLTAGIFKD GFNRFAEGGQRRIHITDDLDDVXXXXXXXSWKE
Sbjct: 1   MRICFSPSSLLPVFFLIVLTAGIFKDAGFNRFAEGGQRRIHITDDLDDVXXXXXXXSWKE 60

Query: 61  WGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVGTIAM 120
           WGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVGTIAM
Sbjct: 61  WGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVGTIAM 120

Query: 121 QWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPG 180
           QWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPG
Sbjct: 121 QWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPG 180

Query: 181 DPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 215
           DPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL
Sbjct: 181 DPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 214

[Close]
BLAST of Carg24652 vs. NCBI nr
Match: XP_023540100.1 (uncharacterized protein LOC111800579 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 409.5 bits (1051), Expect = 7.2e-111
Identity = 213/214 (99.53%), Postives = 213/214 (99.53%), Query Frame = 0 

Query: 1   MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVXXXXXXXSWKE 60
           MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVXXXXXXXSWKE
Sbjct: 1   MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVXXXXXXXSWKE 60

Query: 61  WGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVGTIAM 120
           WGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMV TIAM
Sbjct: 61  WGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVATIAM 120

Query: 121 QWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPG 180
           QWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPG
Sbjct: 121 QWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPG 180

Query: 181 DPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 215
           DPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL
Sbjct: 181 DPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 214

[Close]
BLAST of Carg24652 vs. NCBI nr
Match: XP_022974607.1 (uncharacterized protein LOC111473291 [Cucurbita maxima])

HSP 1 Score: 401.4 bits (1030), Expect = 2.0e-108
Identity = 209/214 (97.66%), Postives = 210/214 (98.13%), Query Frame = 0 

Query: 1   MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVXXXXXXXSWKE 60
           MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRI ITDDLDD XXXXXXX WKE
Sbjct: 1   MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIQITDDLDDXXXXXXXXXWKE 60

Query: 61  WGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVGTIAM 120
           WGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMV TIAM
Sbjct: 61  WGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVATIAM 120

Query: 121 QWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPG 180
           QWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVF+HPESYEIKIGEQAFRRPG
Sbjct: 121 QWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFNHPESYEIKIGEQAFRRPG 180

Query: 181 DPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 215
           DPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL
Sbjct: 181 DPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 214

[Close]
BLAST of Carg24652 vs. NCBI nr
Match: XP_008438032.1 (PREDICTED: uncharacterized protein LOC103483266 [Cucumis melo])

HSP 1 Score: 341.7 bits (875), Expect = 1.9e-90
Identity = 167/214 (78.04%), Postives = 186/214 (86.92%), Query Frame = 0 

Query: 1   MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVXXXXXXXSWKE 60
           MRICFS SS LPVF LIV+  GI KD GFNRFA+GGQRRIHITDDLDDV       SWK+
Sbjct: 1   MRICFSRSSPLPVFILIVIATGILKDAGFNRFADGGQRRIHITDDLDDVVDDEEDDSWKD 60

Query: 61  WGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVGTIAM 120
           WGKKKS SSDFD+PP DLSKM+ PEIQAEMMKR SGPTMGFVKLRLGVRRTP+MV  IAM
Sbjct: 61  WGKKKSVSSDFDIPPADLSKMDFPEIQAEMMKRHSGPTMGFVKLRLGVRRTPDMVAEIAM 120

Query: 121 QWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPG 180
           QWT++LKTGS++AKFMAVDL+TLMFT+DRGQDL+ELKEFV S  ESYEIKIG+  FRRPG
Sbjct: 121 QWTKVLKTGSVDAKFMAVDLNTLMFTMDRGQDLNELKEFVLSQAESYEIKIGDNVFRRPG 180

Query: 181 DPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 215
           DPP+EEVI++LQKDKNKAD T PSE+ EPLH+EL
Sbjct: 181 DPPLEEVIQLLQKDKNKADGTVPSENAEPLHREL 214

[Close]
BLAST of Carg24652 vs. NCBI nr
Match: XP_004133861.1 (PREDICTED: uncharacterized protein LOC101221666 [Cucumis sativus] >KGN56507.1 hypothetical protein Csa_3G122310 [Cucumis sativus])

HSP 1 Score: 338.2 bits (866), Expect = 2.0e-89
Identity = 165/214 (77.10%), Postives = 187/214 (87.38%), Query Frame = 0 

Query: 1   MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVXXXXXXXSWKE 60
           MRICFS SS LPVF LIV+ AGI  DVGFNRFA+GGQRR+HITDDLDDV       SWK+
Sbjct: 1   MRICFSRSSRLPVFILIVIAAGILNDVGFNRFADGGQRRVHITDDLDDVVDDEEDDSWKD 60

Query: 61  WGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVGTIAM 120
           WGKKKSAS+DFD+PP DLSKM++PEIQAEMMKR SGPTMGFVKLRLGVRRTP+ V  IAM
Sbjct: 61  WGKKKSASNDFDIPPADLSKMDIPEIQAEMMKRHSGPTMGFVKLRLGVRRTPDTVAEIAM 120

Query: 121 QWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPG 180
           QWT++LKTGS+EAKFMAVDL+TLMFT+DRGQDL+EL EFV S  ESYEIKIG+  FRRPG
Sbjct: 121 QWTKVLKTGSVEAKFMAVDLNTLMFTMDRGQDLNELNEFVLSQAESYEIKIGDNVFRRPG 180

Query: 181 DPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 215
           DPP+EEVI++LQKDKNKAD T  S+++EPLHQEL
Sbjct: 181 DPPLEEVIQLLQKDKNKADGTVSSKNSEPLHQEL 214

[Close]
BLAST of Carg24652 vs. TAIR10
Match: AT2G46000.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 154.5 bits (389), Expect = 7.6e-38
Identity = 92/187 (49.20%), Postives = 121/187 (64.71%), Query Frame = 0 

Query: 28  GFNRFAEGGQRRIHITDDLDDVXXXXXXXSWKEWGKKKSASSDFDLPPPDLSKMELPEIQ 87
           GF R AE  +RRI I+DD    XXXXXXX       KK+ + +FD PPPD + M   +IQ
Sbjct: 24  GFVRIAEATKRRIEISDD-XXXXXXXXXXXXXXXXXKKATTPEFD-PPPDFTNMGFDQIQ 83

Query: 88  AEMMKRQSGPTMGFVKLRLGVRRTPEMVGTIAMQWTRILKTGSIEAKFMAVDLSTLMFTV 147
            EM KR  G  +GFVKLRLGV RT ++V  IAM+WT++L+TG I  +FMAVD ST+MF +
Sbjct: 84  EEMAKRTFGTVVGFVKLRLGVPRTKDVVIDIAMKWTKVLRTGGIGVRFMAVDRSTVMFNM 143

Query: 148 DRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIEMLQKDKNKADDTNPSEDT 207
             G+ + EL+EFV S  E+YE+KIG+Q FRRPGDPP E+V +  Q ++ K  +       
Sbjct: 144 QNGKLVTELREFVLSQEEAYEVKIGKQEFRRPGDPPFEDVFDKFQAEQRKDHEDGDGNKN 203

Query: 208 EPLHQEL 215
           +    EL
Sbjct: 204 DLTKDEL 208

[Close]
BLAST of Carg24652 vs. TrEMBL
Match: tr|A0A1S3AVD9|A0A1S3AVD9_CUCME (uncharacterized protein LOC103483266 OS=Cucumis melo OX=3656 GN=LOC103483266 PE=4 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 1.2e-90
Identity = 167/214 (78.04%), Postives = 186/214 (86.92%), Query Frame = 0 

Query: 1   MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVXXXXXXXSWKE 60
           MRICFS SS LPVF LIV+  GI KD GFNRFA+GGQRRIHITDDLDDV       SWK+
Sbjct: 1   MRICFSRSSPLPVFILIVIATGILKDAGFNRFADGGQRRIHITDDLDDVVDDEEDDSWKD 60

Query: 61  WGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVGTIAM 120
           WGKKKS SSDFD+PP DLSKM+ PEIQAEMMKR SGPTMGFVKLRLGVRRTP+MV  IAM
Sbjct: 61  WGKKKSVSSDFDIPPADLSKMDFPEIQAEMMKRHSGPTMGFVKLRLGVRRTPDMVAEIAM 120

Query: 121 QWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPG 180
           QWT++LKTGS++AKFMAVDL+TLMFT+DRGQDL+ELKEFV S  ESYEIKIG+  FRRPG
Sbjct: 121 QWTKVLKTGSVDAKFMAVDLNTLMFTMDRGQDLNELKEFVLSQAESYEIKIGDNVFRRPG 180

Query: 181 DPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 215
           DPP+EEVI++LQKDKNKAD T PSE+ EPLH+EL
Sbjct: 181 DPPLEEVIQLLQKDKNKADGTVPSENAEPLHREL 214

[Close]
BLAST of Carg24652 vs. TrEMBL
Match: tr|A0A0A0L7G1|A0A0A0L7G1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122310 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 1.4e-89
Identity = 165/214 (77.10%), Postives = 187/214 (87.38%), Query Frame = 0 

Query: 1   MRICFSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVXXXXXXXSWKE 60
           MRICFS SS LPVF LIV+ AGI  DVGFNRFA+GGQRR+HITDDLDDV       SWK+
Sbjct: 1   MRICFSRSSRLPVFILIVIAAGILNDVGFNRFADGGQRRVHITDDLDDVVDDEEDDSWKD 60

Query: 61  WGKKKSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVGTIAM 120
           WGKKKSAS+DFD+PP DLSKM++PEIQAEMMKR SGPTMGFVKLRLGVRRTP+ V  IAM
Sbjct: 61  WGKKKSASNDFDIPPADLSKMDIPEIQAEMMKRHSGPTMGFVKLRLGVRRTPDTVAEIAM 120

Query: 121 QWTRILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPG 180
           QWT++LKTGS+EAKFMAVDL+TLMFT+DRGQDL+EL EFV S  ESYEIKIG+  FRRPG
Sbjct: 121 QWTKVLKTGSVEAKFMAVDLNTLMFTMDRGQDLNELNEFVLSQAESYEIKIGDNVFRRPG 180

Query: 181 DPPVEEVIEMLQKDKNKADDTNPSEDTEPLHQEL 215
           DPP+EEVI++LQKDKNKAD T  S+++EPLHQEL
Sbjct: 181 DPPLEEVIQLLQKDKNKADGTVSSKNSEPLHQEL 214

[Close]
BLAST of Carg24652 vs. TrEMBL
Match: tr|M5XDJ9|M5XDJ9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G172500 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 1.2e-61
Identity = 118/205 (57.56%), Postives = 155/205 (75.61%), Query Frame = 0 

Query: 10  LLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVXXXXXXXSWKEWGKKKSASS 69
           L  + F  +L     ++  + RFAE G+RR+HITDDLDDV       +WKEWGKK + SS
Sbjct: 11  LFAILFFFILPLFFSQNGEYVRFAEAGKRRVHITDDLDDVVDDEEDDTWKEWGKKSTPSS 70

Query: 70  DFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVGTIAMQWTRILKTG 129
           DFD PPPDLSKM++ EIQAEMMKR  GP  GFVKLRLGV+RT + V  IAM+WT++L+TG
Sbjct: 71  DFD-PPPDLSKMDMSEIQAEMMKRHIGPAFGFVKLRLGVKRTRDTVAEIAMKWTKVLRTG 130

Query: 130 SIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIE 189
           ++  +FM VDLST+MF +++GQD+ ELKEFV++ PE+YEIKIGEQ FRRPGDPP+EEV+E
Sbjct: 131 ALGVRFMGVDLSTIMFNMEQGQDMTELKEFVWNQPEAYEIKIGEQVFRRPGDPPLEEVVE 190

Query: 190 MLQKDKNKADDTNPSEDTEPLHQEL 215
            LQ +K + ++ +P+E    L +EL
Sbjct: 191 KLQNEKKRVENESPAESNMHLKEEL 214

[Close]
BLAST of Carg24652 vs. TrEMBL
Match: tr|A0A2P6SHJ6|A0A2P6SHJ6_ROSCH (Putative mesoderm development candidate 2 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr1g0356151 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 6.6e-60
Identity = 115/205 (56.10%), Postives = 153/205 (74.63%), Query Frame = 0 

Query: 10  LLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVXXXXXXXSWKEWGKKKSASS 69
           L+ V    +L    F + G+ RFAEGG+RR+HITDDLDDV       +WKEWGKK  ++ 
Sbjct: 11  LVTVLVFFILPLIFFPNGGYVRFAEGGKRRVHITDDLDDVVDDEEDDTWKEWGKK--STQ 70

Query: 70  DFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVGTIAMQWTRILKTG 129
            FDLPP D+SKMEL EIQAEMMKR SGP  GF+KLRLGV+RT +MV  IAM+W+++L+TG
Sbjct: 71  HFDLPPNDMSKMELSEIQAEMMKRHSGPVFGFIKLRLGVKRTRDMVAEIAMKWSKVLRTG 130

Query: 130 SIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPVEEVIE 189
           SI  +FM VD+ST+M T++RGQD+ ELKEFV S PE+YEIKIG+Q FRRPGDPP+++++E
Sbjct: 131 SIGVRFMGVDMSTIMVTMERGQDMTELKEFVLSQPEAYEIKIGDQVFRRPGDPPLDQIVE 190

Query: 190 MLQKDKNKADDTNPSEDTEPLHQEL 215
            LQ ++   ++   +E    + +EL
Sbjct: 191 KLQNERKGIENDGSTESNRQVKEEL 213

[Close]
BLAST of Carg24652 vs. TrEMBL
Match: tr|A0A1U7ZPK7|A0A1U7ZPK7_NELNU (uncharacterized protein LOC104596024 OS=Nelumbo nucifera OX=4432 GN=LOC104596024 PE=4 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.5e-59
Identity = 124/210 (59.05%), Postives = 156/210 (74.29%), Query Frame = 0 

Query: 5   FSPSSLLPVFFLIVLTAGIFKDVGFNRFAEGGQRRIHITDDLDDVXXXXXXXSWKEWGKK 64
           FS S L+  F ++VL   + ++    R A+GG +R+HI D+LDDV       +WKEWGKK
Sbjct: 14  FSNSFLVYAFLILVLI--VAENGVIVRLADGG-KRVHIPDELDDVIDDEEDEAWKEWGKK 73

Query: 65  KSASSDFDLPPPDLSKMELPEIQAEMMKRQSGPTMGFVKLRLGVRRTPEMVGTIAMQWTR 124
            S S +FD PP DLS MEL +IQ EMMK   GP+ GFVKLRLGVRR+ EMV   AM+WT+
Sbjct: 74  SSPSQEFDPPPMDLSGMELSQIQEEMMKHHFGPSFGFVKLRLGVRRSAEMVAETAMKWTK 133

Query: 125 ILKTGSIEAKFMAVDLSTLMFTVDRGQDLDELKEFVFSHPESYEIKIGEQAFRRPGDPPV 184
           +LKTGSIEAKFMAVD +TLMFT++RG+D  ELK+FV S P++YEIKIG++ FRRPGDPP+
Sbjct: 134 VLKTGSIEAKFMAVDGNTLMFTMERGKDTTELKDFVLSQPDAYEIKIGDRVFRRPGDPPL 193

Query: 185 EEVIEMLQKDKNKADDTNPSEDTEPLHQEL 215
           EEVIEML +DKNKA+D    ++ E L  EL
Sbjct: 194 EEVIEMLHRDKNKAEDAGVVQEREHLKDEL 220

The following BLAST results are available for this feature:
BLAST of Carg24652 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022942170.14.2e-11199.53uncharacterized protein LOC111447309 [Cucurbita moschata][more]
XP_023540100.17.2e-11199.53uncharacterized protein LOC111800579 [Cucurbita pepo subsp. pepo][more]
XP_022974607.12.0e-10897.66uncharacterized protein LOC111473291 [Cucurbita maxima][more]
XP_008438032.11.9e-9078.04PREDICTED: uncharacterized protein LOC103483266 [Cucumis melo][more]
XP_004133861.12.0e-8977.10PREDICTED: uncharacterized protein LOC101221666 [Cucumis sativus] >KGN56507.1 hy... [more]
BLAST of Carg24652 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G46000.17.6e-3849.20FUNCTIONS IN: molecular_function unknown[more]
BLAST of Carg24652 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg24652 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AVD9|A0A1S3AVD9_CUCME1.2e-9078.04uncharacterized protein LOC103483266 OS=Cucumis melo OX=3656 GN=LOC103483266 PE=... [more]
tr|A0A0A0L7G1|A0A0A0L7G1_CUCSA1.4e-8977.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G122310 PE=4 SV=1[more]
tr|M5XDJ9|M5XDJ9_PRUPE1.2e-6157.56Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G172500 PE=4 SV=1[more]
tr|A0A2P6SHJ6|A0A2P6SHJ6_ROSCH6.6e-6056.10Putative mesoderm development candidate 2 OS=Rosa chinensis OX=74649 GN=RchiOBHm... [more]
tr|A0A1U7ZPK7|A0A1U7ZPK7_NELNU1.5e-5959.05uncharacterized protein LOC104596024 OS=Nelumbo nucifera OX=4432 GN=LOC104596024... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24652-RACarg24652-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.30.70.260coord: 84..178
e-value: 2.7E-6
score: 29.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..214
NoneNo IPR availablePANTHERPTHR36357FAMILY NOT NAMEDcoord: 14..214