Carg24551 (gene) Silver-seed gourd

Overview
NameCarg24551
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionMembrane-anchored ubiquitin-fold protein
LocationCucurbita_argyrosperma_scaffold_330 : 68109 .. 71651 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATATATCGAATTTCTTATTGAATAATATTCTTCTTTCTGAAAAGCCTGCAGCTGAGAGGAAACTCTGCCTTGGCCTTGCCTGATCGACGGCTTCACAAAGGTCTCTTCTCTCTTCTCTTGATTGTCGTTTTCTTTTCACTTTATTCAAAATTACTTCCCTTTTCGGATCTTTCATGGTGTTCACTCCTGCAATTGCTTCAGCTTCGTTGCTGTTGGAATTCCTGTGAATTTGTTCTAGGGCACCGGATATTGGGCCGCGTCTCTGATCAATTCAAGGTCGGGATCCAACACTTATACCTGATTGTGAAATACTCAACTCAGATGCCGGAGGACGATTTGATTGACATTAAGTTCAGGCTCTACGATGGTTCTGATATTGGACCATTTCGATACTCGTCCGCATCGACAATAGATGTGCTTAAGCAGAGAATAGTGTCCGATTGGCCCAAAGGTTCCAGCTTAGCTCTTCATCTTCTCCTTATTCTTTTCAATTATAAGTACTCAATTTGTAATCATTTCTCACATTTAGGTTTCTGTATGTCCTTTGAATGCAAACGCTAAGTAGACTTCCGGCTTTCCTAATTGCATGTCTAGAGTCTGTTGATCCTCCTTTTTTTAGTACTATAGGCTGCTAGCTTAAGAAATCTATTTTTAGGACTAATATTTTATTCTTGGCAGACAGCTCTGCGTAGATATTTTATTCTTGATTTACGCGCTCGTTCAGAGGACGCATGTTCAATTCTTTGATGTGTGTCGTTTACCATTAGGAACTCATGCCTGTGTTTGAGGTTTCTCTGAAGAAGTGTCTTTCTTTCACTGGGCTTCTGATCTTCTTCTTTTTTCCTCTGCATTTGTTTTCATATTGATTCTCCTTTTCCCTTTTGGGACGATTTTTCTTTACCTTTTAGGCAAAACAATCACTCCAAAGGCAGCAAGTGAAGTAAAACTGATAAGTTCTGGAAAAATTTTGGAAAATAACAAGACTGTTGGTCAGTGTAAATTACCTTTTGGTGAGTTCACTGGAGGAGTTACTATAATGCACGTTGTTGTACAGCCATCCCTAGCAAAAGCTAAAACAGGTGATTACATTTGAGATTTTAGCTATAAATATAAATTTCTTGTTCATAGATTGTTCCTTTTAAAATTTTACAGTAATACGGTATATTTTCCATTTTGTCCTATACCCGATGGTTTTTCAAATACTCTGGATGTAGTTCGACAAGTCTATATAAATGAGGTCTTAGGAGTTGGAACCGTATTCTGAACTGATACAGTTATCCATTTGTTGGTCTTTTTTGGCTTGAACTTGGGTCAATACTCTTCTGATGCTAATCACTAACAACTGTTTTTGTTGCTCTTTCTGAAGTTAATGAGATATAACAATTTCAAAATCATTCTTAGAGCATTCAATCAGCTTTGACTAGTGCTTTTGAGTTAGAAGTTTGACTTTGCTAACTAGAATACCGAATCTTAGCAAGTGGTCCCATGAGTTAGCTATCATGAGCCTTTCAGAGAACCTTCTTTCTTCATTTATTCTGCCGCAGATGTTATCCCTTTTTTCTAAGCTTGTCCTGAACTACTGCCTGTGGCTTTTAAATGAAGAAGTGTTTTTGAGTGCTTTCTTTGAATGGTTAAGACAATAACTGTTTCAGGTTGTAGCCAAACCATTTCATTTAACCCAAAGTCATAGGATCATCTCATTGACTATTACTCCTCTACAAAGTATGCAGCGAAAAGTGAAAGTAGTCCATGGGTTGACCTAGTGGTTAAGAAGGCCAAATGAGAAGAGTTGAAGTGTGTGTATGGTCCTCAAATTTTGTGTCCATTTGGTTCATAAACTTTTAAAATTACAAATTTTAATTTATACCTATTAGATCAATTAGTTTTAAAAATTTTCAAATTTTTTGGTGACCTAAACACAAAGTTGAAAATTTCAAGACTTATTAGATATTTTTGAAAGCTGAAGGACCAAATAAACACAAGTTGAGAGACTAAACTTGTTATTTAAGATAGATATTTTCTAAGGGCTTAGGCTGGTTTATTATTCGGATCTACTAGTAATGATAAAAATTCTTGTCAGCTTTGCAGATTTAACTAAAGATTCAAAATATCCACTCCTACCCATTCTTATTTTTTTCCTGATTTGGCCCTTTTCTCTACTCTTGCTTCTTCTCTCTTCAATATTTTTTCCTTTTTATCTTTTTTCTTCTTTTCATATTCTTTTATCATTGGAAAAACTAGAATAAACTAGAGAAGAAAGAACTTGGATTGTTGTGAGGGCCGAGGAAAATCAAAAAAATCTTCCAGATTTATTTATTTTATTTTGTTAAGTTTACAGTTAATTAACTGTTGATTACTATTAAAATCTGTTATATTATTTTTATTATACAATATAGAAATTATGTATTAACTAGCCTTATGTAATTGACTTGCTCTAATTTCCATATTGCAAAGATTTAATTTTGATTAATACATTAACTAATATCTCACGATTACATATGCTTACTTCTGATTCTATAAGAACCTCTCTTATTTCCATGAAACATGACTATAAGTTTCTATAATTGCTTAGAATTTCTGTATGTTTCATCTTCACATATGATTACTTGGGATTCTATGAAAACATCGTTTATTTCCATGAAGGTTGACAAAGTTGTTATGAAAGCTAAAACATACTTCTGATTCCAAAATAAAGAGGGTATAGTCAATCAAATTTAAACTAAGTTTGCCAATGTGGCAGTCTAGGATCTCCTTTGTGGATTTGTTTTCTTCTGTTTGATTATCAATTGTTCTTTCTTGATTCCATTGAATGCATATCCAAACAATATCCACAGCTACGTATGTACCCCTTGACGAGCAAGAAGAATGAAAAATAGAAAGTTACCTGTATAAATAAGTTTATGTGACTGCTATGGGTTTCTAGCCAATTTTTGAAAATGATCATTGTAAAACTAGATTAAATCATGTAATCACTATCCAAATTTGTTTTTCCGATGAGTGTGGTAATTCTTTGCTGTGATATCAAATATTTACTGAGATATGTTGATGATACAGAGAAAAAGACTGACAATTCGCAACAGAAGATCGTGTGCTCCTGTTCCATACTTTGAAACACAACACGAATGATATGATTCGTTTGGTAAATCATCTTTCAAAACGTGGTTGCTATCGGCCATATTCTTGTGTATAAATGGTTTCTGGTAAATTGGTAATGATGTGTTTAGGAACATTGACATGAAGGACATGTTTCTCTTTTATGTGATTGTGAAGTTTTCATATGATATTTCAAATTCTTTGGTTACTAAGGTCATGCTGTATTCTGTTTTTCCCATGTGCGTTTCTCTTTTGGTACAGGAGAAGCTAGGTCATCTCTCTTAGAGGGTTTGCAGATAGAAGAAGAGGGCTATTTATAGATTTTGAGATGAGTTCAAAGGTCTAGAATACTCCTTAGGGATACTGCTCGAGTACTAAGGCAATTAGGGTAATTTTGGAAAGTTGCAAGAGTATTTCTATCCCTATACTTTTTTCCCCATCAAAAGAA

mRNA sequence

ATATATATCGAATTTCTTATTGAATAATATTCTTCTTTCTGAAAAGCCTGCAGCTGAGAGGAAACTCTGCCTTGGCCTTGCCTGATCGACGGCTTCACAAAGGGCACCGGATATTGGGCCGCGTCTCTGATCAATTCAAGGTCGGGATCCAACACTTATACCTGATTGTGAAATACTCAACTCAGATGCCGGAGGACGATTTGATTGACATTAAGTTCAGGCTCTACGATGGTTCTGATATTGGACCATTTCGATACTCGTCCGCATCGACAATAGATGTGCTTAAGCAGAGAATAGTGTCCGATTGGCCCAAAGAAGTGTCTTTCTTTCACTGGGCTTCTGATCTTCTTCTTTTTTCCTCTGCATTTGTTTTCATATTGATTCTCCTTTTCCCTTTTGGGACGATTTTTCTTTACCTTTTAGGCAAAACAATCACTCCAAAGGCAGCAAGTGAAGTAAAACTGATAAGTTCTGGAAAAATTTTGGAAAATAACAAGACTGTTGGTCAGTGTAAATTACCTTTTGGTGAGTTCACTGGAGGAGTTACTATAATGCACGTTGTTGTACAGCCATCCCTAGCAAAAGCTAAAACAGGAGAAGCTAGGTCATCTCTCTTAGAGGGTTTGCAGATAGAAGAAGAGGGCTATTTATAGATTTTGAGATGAGTTCAAAGGTCTAGAATACTCCTTAGGGATACTGCTCGAGTACTAAGGCAATTAGGGTAATTTTGGAAAGTTGCAAGAGTATTTCTATCCCTATACTTTTTTCCCCATCAAAAGAA

Coding sequence (CDS)

ATGCCGGAGGACGATTTGATTGACATTAAGTTCAGGCTCTACGATGGTTCTGATATTGGACCATTTCGATACTCGTCCGCATCGACAATAGATGTGCTTAAGCAGAGAATAGTGTCCGATTGGCCCAAAGAAGTGTCTTTCTTTCACTGGGCTTCTGATCTTCTTCTTTTTTCCTCTGCATTTGTTTTCATATTGATTCTCCTTTTCCCTTTTGGGACGATTTTTCTTTACCTTTTAGGCAAAACAATCACTCCAAAGGCAGCAAGTGAAGTAAAACTGATAAGTTCTGGAAAAATTTTGGAAAATAACAAGACTGTTGGTCAGTGTAAATTACCTTTTGGTGAGTTCACTGGAGGAGTTACTATAATGCACGTTGTTGTACAGCCATCCCTAGCAAAAGCTAAAACAGGAGAAGCTAGGTCATCTCTCTTAGAGGGTTTGCAGATAGAAGAAGAGGGCTATTTATAG

Protein sequence

MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKEVSFFHWASDLLLFSSAFVFILILLFPFGTIFLYLLGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVVVQPSLAKAKTGEARSSLLEGLQIEEEGYL
Homology
[Close]
BLAST of Carg24551 vs. NCBI nr
Match: XP_008464397.1 (PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_008464399.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_008464400.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_008464401.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_016903199.1 PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_022932632.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita moschata] >XP_022932642.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita moschata] >XP_022974355.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita maxima] >XP_022974363.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita maxima] >XP_023531895.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita pepo subsp. pepo] >XP_023531896.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 188.0 bits (476), Expect = 2.5e-44
Identity = 100/136 (73.53%), Postives = 100/136 (73.53%), Query Frame = 0 

Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKEVSFFHWASDLLLFSSA 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPK                 
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPK----------------- 60

Query: 61  FVFILILLFPFGTIFLYLLGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGV 120
                              GKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGV
Sbjct: 61  -------------------GKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGV 100

Query: 121 TIMHVVVQPSLAKAKT 137
           TIMHVVVQPSLAKAKT
Sbjct: 121 TIMHVVVQPSLAKAKT 100

[Close]
BLAST of Carg24551 vs. NCBI nr
Match: XP_011650282.1 (PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis sativus] >KGN63460.1 hypothetical protein Csa_1G001320 [Cucumis sativus])

HSP 1 Score: 187.6 bits (475), Expect = 3.2e-44
Identity = 99/136 (72.79%), Postives = 100/136 (73.53%), Query Frame = 0 

Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKEVSFFHWASDLLLFSSA 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPK                 
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPK----------------- 60

Query: 61  FVFILILLFPFGTIFLYLLGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGV 120
                              GKTITPKAASE+KLISSGKILENNKTVGQCKLPFGEFTGGV
Sbjct: 61  -------------------GKTITPKAASEIKLISSGKILENNKTVGQCKLPFGEFTGGV 100

Query: 121 TIMHVVVQPSLAKAKT 137
           TIMHVVVQPSLAKAKT
Sbjct: 121 TIMHVVVQPSLAKAKT 100

[Close]
BLAST of Carg24551 vs. NCBI nr
Match: XP_022134657.1 (membrane-anchored ubiquitin-fold protein 3-like [Momordica charantia] >XP_022134659.1 membrane-anchored ubiquitin-fold protein 3-like [Momordica charantia] >XP_022134660.1 membrane-anchored ubiquitin-fold protein 3-like [Momordica charantia])

HSP 1 Score: 185.3 bits (469), Expect = 1.6e-43
Identity = 98/136 (72.06%), Postives = 99/136 (72.79%), Query Frame = 0 

Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKEVSFFHWASDLLLFSSA 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIV DWPK                 
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVXDWPK----------------- 60

Query: 61  FVFILILLFPFGTIFLYLLGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGV 120
                              GKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGV
Sbjct: 61  -------------------GKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGV 100

Query: 121 TIMHVVVQPSLAKAKT 137
           TIMHVVVQPS+AKAKT
Sbjct: 121 TIMHVVVQPSIAKAKT 100

[Close]
BLAST of Carg24551 vs. NCBI nr
Match: XP_022932445.1 (membrane-anchored ubiquitin-fold protein 3-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 184.5 bits (467), Expect = 2.7e-43
Identity = 96/136 (70.59%), Postives = 99/136 (72.79%), Query Frame = 0 

Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKEVSFFHWASDLLLFSSA 60
           MPEDDLIDIKFRLYDGSD+GPFRYSSAST+DVLKQRIVSDWPK                 
Sbjct: 1   MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPK----------------- 60

Query: 61  FVFILILLFPFGTIFLYLLGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGV 120
                              GKT+TPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGV
Sbjct: 61  -------------------GKTVTPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGV 100

Query: 121 TIMHVVVQPSLAKAKT 137
            IMHVVVQPSLAKAKT
Sbjct: 121 IIMHVVVQPSLAKAKT 100

[Close]
BLAST of Carg24551 vs. NCBI nr
Match: XP_022932437.1 (membrane-anchored ubiquitin-fold protein 3-like isoform X1 [Cucurbita moschata] >XP_023531891.1 membrane-anchored ubiquitin-fold protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 184.5 bits (467), Expect = 2.7e-43
Identity = 96/136 (70.59%), Postives = 99/136 (72.79%), Query Frame = 0 

Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKEVSFFHWASDLLLFSSA 60
           MPEDDLIDIKFRLYDGSD+GPFRYSSAST+DVLKQRIVSDWPK                 
Sbjct: 1   MPEDDLIDIKFRLYDGSDVGPFRYSSASTVDVLKQRIVSDWPK----------------- 60

Query: 61  FVFILILLFPFGTIFLYLLGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGV 120
                              GKT+TPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGV
Sbjct: 61  -------------------GKTVTPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGV 100

Query: 121 TIMHVVVQPSLAKAKT 137
            IMHVVVQPSLAKAKT
Sbjct: 121 IIMHVVVQPSLAKAKT 100

[Close]
BLAST of Carg24551 vs. TAIR10
Match: AT4G24990.1 (Ubiquitin family protein)

HSP 1 Score: 160.6 bits (405), Expect = 7.7e-40
Identity = 81/136 (59.56%), Postives = 91/136 (66.91%), Query Frame = 0 

Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKEVSFFHWASDLLLFSSA 60
           MPE++ IDIKFRLYDGSDIGPFRYS+AST+D LKQR+VSDWPK                 
Sbjct: 1   MPEEESIDIKFRLYDGSDIGPFRYSAASTVDFLKQRVVSDWPK----------------- 60

Query: 61  FVFILILLFPFGTIFLYLLGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGV 120
                              GKT+ PK  +EVKLISSGKILENNKTVGQCK PFG+  GGV
Sbjct: 61  -------------------GKTVVPKGINEVKLISSGKILENNKTVGQCKTPFGDIAGGV 100

Query: 121 TIMHVVVQPSLAKAKT 137
            +MHVVVQPSLAK+KT
Sbjct: 121 IVMHVVVQPSLAKSKT 100

[Close]
BLAST of Carg24551 vs. TAIR10
Match: AT3G26980.1 (membrane-anchored ubiquitin-fold protein 4 precursor)

HSP 1 Score: 124.0 bits (310), Expect = 8.0e-29
Identity = 62/135 (45.93%), Postives = 81/135 (60.00%), Query Frame = 0 

Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKEVSFFHWASDLLLFSSA 60
           MPE+DL+++KFRLYDGSD+GPF+YS  +T+ +LK+RIVS+WPK+                
Sbjct: 1   MPEEDLVELKFRLYDGSDVGPFQYSPTATVSMLKERIVSEWPKD---------------- 60

Query: 61  FVFILILLFPFGTIFLYLLGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGV 120
                               K I PK+AS++KLI++GKILEN KTV QCK PF +    V
Sbjct: 61  --------------------KKIVPKSASDIKLINAGKILENGKTVAQCKAPFDDLPKSV 99

Query: 121 TIMHVVVQPSLAKAK 136
             MHVVVQ S  KA+
Sbjct: 121 ITMHVVVQLSPTKAR 99

[Close]
BLAST of Carg24551 vs. TAIR10
Match: AT5G15460.1 (membrane-anchored ubiquitin-fold protein 2)

HSP 1 Score: 96.3 bits (238), Expect = 1.8e-20
Identity = 49/124 (39.52%), Postives = 66/124 (53.23%), Query Frame = 0 

Query: 5   DLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKEVSFFHWASDLLLFSSAFVFI 64
           D ++IKFRL DGSDIGP  +  A+T+  LK+ +V+ WP++                    
Sbjct: 6   DQLEIKFRLNDGSDIGPKLFPDATTVATLKETVVAQWPRD-------------------- 65

Query: 65  LILLFPFGTIFLYLLGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMH 124
                           K   PK   +VKLIS+G+ILENNKTVG C+ P G F+G VT MH
Sbjct: 66  ----------------KENGPKTVKDVKLISAGRILENNKTVGDCRSPVGNFSGAVTTMH 93

Query: 125 VVVQ 129
           V++Q
Sbjct: 126 VIIQ 93

[Close]
BLAST of Carg24551 vs. TAIR10
Match: AT1G22050.1 (membrane-anchored ubiquitin-fold protein 6 precursor)

HSP 1 Score: 89.7 bits (221), Expect = 1.7e-18
Identity = 46/132 (34.85%), Postives = 73/132 (55.30%), Query Frame = 0 

Query: 3   EDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKEVSFFHWASDLLLFSSAFV 62
           E+D I++KFRL DG+DIGP +Y+ + T+  LK++++S WPK+                  
Sbjct: 4   EEDWIELKFRLADGTDIGPSKYNQSMTVSSLKEKLISQWPKD------------------ 63

Query: 63  FILILLFPFGTIFLYLLGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTI 122
                             K  TPK  +++KLI++GKILENN+T+ + +LP  E  G +  
Sbjct: 64  ------------------KENTPKTVNDMKLINAGKILENNRTLAESRLPVCELPGMIIT 99

Query: 123 MHVVVQ-PSLAK 134
           MH+V++ P+L K
Sbjct: 124 MHIVLRLPTLDK 99

[Close]
BLAST of Carg24551 vs. TAIR10
Match: AT3G01050.1 (membrane-anchored ubiquitin-fold protein 1 precursor)

HSP 1 Score: 86.3 bits (212), Expect = 1.8e-17
Identity = 45/122 (36.89%), Postives = 61/122 (50.00%), Query Frame = 0 

Query: 7   IDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKEVSFFHWASDLLLFSSAFVFILI 66
           ++IKFRL DGSDIGP  +  A+T+  LK+ ++S+WP+E                      
Sbjct: 8   LEIKFRLTDGSDIGPKAFPDATTVSALKETVISEWPRE---------------------- 67

Query: 67  LLFPFGTIFLYLLGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVV 126
                         K   PK   EVKLIS+GK+LEN+KTV   + P     G VT MHV+
Sbjct: 68  --------------KENGPKTVKEVKLISAGKVLENSKTVKDYRSPVSNLAGAVTTMHVI 93

Query: 127 VQ 129
           +Q
Sbjct: 128 IQ 93

[Close]
BLAST of Carg24551 vs. Swiss-Prot
Match: sp|Q9SW27|MUB3_ARATH (Membrane-anchored ubiquitin-fold protein 3 OS=Arabidopsis thaliana OX=3702 GN=MUB3 PE=1 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.4e-38
Identity = 81/136 (59.56%), Postives = 91/136 (66.91%), Query Frame = 0 

Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKEVSFFHWASDLLLFSSA 60
           MPE++ IDIKFRLYDGSDIGPFRYS+AST+D LKQR+VSDWPK                 
Sbjct: 1   MPEEESIDIKFRLYDGSDIGPFRYSAASTVDFLKQRVVSDWPK----------------- 60

Query: 61  FVFILILLFPFGTIFLYLLGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGV 120
                              GKT+ PK  +EVKLISSGKILENNKTVGQCK PFG+  GGV
Sbjct: 61  -------------------GKTVVPKGINEVKLISSGKILENNKTVGQCKTPFGDIAGGV 100

Query: 121 TIMHVVVQPSLAKAKT 137
            +MHVVVQPSLAK+KT
Sbjct: 121 IVMHVVVQPSLAKSKT 100

[Close]
BLAST of Carg24551 vs. Swiss-Prot
Match: sp|Q9LSD8|MUB4_ARATH (Membrane-anchored ubiquitin-fold protein 4 OS=Arabidopsis thaliana OX=3702 GN=MUB4 PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.4e-27
Identity = 62/135 (45.93%), Postives = 81/135 (60.00%), Query Frame = 0 

Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKEVSFFHWASDLLLFSSA 60
           MPE+DL+++KFRLYDGSD+GPF+YS  +T+ +LK+RIVS+WPK+                
Sbjct: 1   MPEEDLVELKFRLYDGSDVGPFQYSPTATVSMLKERIVSEWPKD---------------- 60

Query: 61  FVFILILLFPFGTIFLYLLGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGV 120
                               K I PK+AS++KLI++GKILEN KTV QCK PF +    V
Sbjct: 61  --------------------KKIVPKSASDIKLINAGKILENGKTVAQCKAPFDDLPKSV 99

Query: 121 TIMHVVVQPSLAKAK 136
             MHVVVQ S  KA+
Sbjct: 121 ITMHVVVQLSPTKAR 99

[Close]
BLAST of Carg24551 vs. Swiss-Prot
Match: sp|Q7XRU4|MUB4_ORYSJ (Membrane-anchored ubiquitin-fold protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB4 PE=2 SV=2)

HSP 1 Score: 110.5 bits (275), Expect = 1.6e-23
Identity = 58/141 (41.13%), Postives = 79/141 (56.03%), Query Frame = 0 

Query: 4   DDLIDIKFRLYDGSDIGPFRYSS-ASTIDVLKQRIVSDWPKEVSFFHWASDLLLFSSAFV 63
           D+ +++KFRL+DGSDIGP R ++ A+T+  LK R+V+DWPK+                  
Sbjct: 20  DEEVEVKFRLFDGSDIGPLRCNAVATTVAALKDRVVADWPKD------------------ 79

Query: 64  FILILLFPFGTIFLYLLGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTI 123
                             KTI PK A++VKLIS GKILEN+K + QC+ PFG+       
Sbjct: 80  ------------------KTIVPKTANDVKLISGGKILENDKNIAQCRAPFGDLPSTAIT 124

Query: 124 MHVVVQPSLAKAKTGEARSSL 144
           MHVVVQPS AK+K  +  + L
Sbjct: 140 MHVVVQPSSAKSKPDKKTNKL 124

[Close]
BLAST of Carg24551 vs. Swiss-Prot
Match: sp|Q8LCS8|MUB2_ARATH (Membrane-anchored ubiquitin-fold protein 2 OS=Arabidopsis thaliana OX=3702 GN=MUB2 PE=1 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.2e-19
Identity = 49/124 (39.52%), Postives = 66/124 (53.23%), Query Frame = 0 

Query: 5   DLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKEVSFFHWASDLLLFSSAFVFI 64
           D ++IKFRL DGSDIGP  +  A+T+  LK+ +V+ WP++                    
Sbjct: 6   DQLEIKFRLNDGSDIGPKLFPDATTVATLKETVVAQWPRD-------------------- 65

Query: 65  LILLFPFGTIFLYLLGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMH 124
                           K   PK   +VKLIS+G+ILENNKTVG C+ P G F+G VT MH
Sbjct: 66  ----------------KENGPKTVKDVKLISAGRILENNKTVGDCRSPVGNFSGAVTTMH 93

Query: 125 VVVQ 129
           V++Q
Sbjct: 126 VIIQ 93

[Close]
BLAST of Carg24551 vs. Swiss-Prot
Match: sp|Q6Z8K4|MUB3_ORYSJ (Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB3 PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.1e-18
Identity = 45/123 (36.59%), Postives = 70/123 (56.91%), Query Frame = 0 

Query: 7   IDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKEVSFFHWASDLLLFSSAFVFILI 66
           I++KFRL+DG+DIGP +Y  ++T+  LK+ I++ WP++                      
Sbjct: 8   IEVKFRLFDGTDIGPSKYDPSTTVSALKEFILARWPQD---------------------- 67

Query: 67  LLFPFGTIFLYLLGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGVTIMHVV 126
                         K ITPK  +++KLI++G+ILENN+T+ + ++P GE  GGV  MHVV
Sbjct: 68  --------------KEITPKTVNDLKLINAGRILENNRTLAESRVPVGEVPGGVITMHVV 94

Query: 127 VQP 130
           V+P
Sbjct: 128 VRP 94

[Close]
BLAST of Carg24551 vs. TrEMBL
Match: tr|A0A1S3CMX7|A0A1S3CMX7_CUCME (Membrane-anchored ubiquitin-fold protein OS=Cucumis melo OX=3656 GN=LOC103502298 PE=4 SV=1)

HSP 1 Score: 188.0 bits (476), Expect = 1.6e-44
Identity = 100/136 (73.53%), Postives = 100/136 (73.53%), Query Frame = 0 

Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKEVSFFHWASDLLLFSSA 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPK                 
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPK----------------- 60

Query: 61  FVFILILLFPFGTIFLYLLGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGV 120
                              GKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGV
Sbjct: 61  -------------------GKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGV 100

Query: 121 TIMHVVVQPSLAKAKT 137
           TIMHVVVQPSLAKAKT
Sbjct: 121 TIMHVVVQPSLAKAKT 100

[Close]
BLAST of Carg24551 vs. TrEMBL
Match: tr|A0A0A0LNH9|A0A0A0LNH9_CUCSA (Membrane-anchored ubiquitin-fold protein OS=Cucumis sativus OX=3659 GN=Csa_1G001320 PE=4 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 2.1e-44
Identity = 99/136 (72.79%), Postives = 100/136 (73.53%), Query Frame = 0 

Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKEVSFFHWASDLLLFSSA 60
           MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPK                 
Sbjct: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPK----------------- 60

Query: 61  FVFILILLFPFGTIFLYLLGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGV 120
                              GKTITPKAASE+KLISSGKILENNKTVGQCKLPFGEFTGGV
Sbjct: 61  -------------------GKTITPKAASEIKLISSGKILENNKTVGQCKLPFGEFTGGV 100

Query: 121 TIMHVVVQPSLAKAKT 137
           TIMHVVVQPSLAKAKT
Sbjct: 121 TIMHVVVQPSLAKAKT 100

[Close]
BLAST of Carg24551 vs. TrEMBL
Match: tr|A0A2N9J181|A0A2N9J181_FAGSY (Membrane-anchored ubiquitin-fold protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS58450 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 1.1e-40
Identity = 90/143 (62.94%), Postives = 99/143 (69.23%), Query Frame = 0 

Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKEVSFFHWASDLLLFSSA 60
           MPE+DL+DIKFRLYDGSD+GPFRYSSAST+D+LKQRIVSDWPK                 
Sbjct: 1   MPEEDLVDIKFRLYDGSDLGPFRYSSASTVDMLKQRIVSDWPK----------------- 60

Query: 61  FVFILILLFPFGTIFLYLLGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGV 120
                              GKTI PKAA EVKLISSGKILENNKTVGQCK+PFG+  GGV
Sbjct: 61  -------------------GKTIVPKAAGEVKLISSGKILENNKTVGQCKMPFGDSGGGV 107

Query: 121 TIMHVVVQPSLAKAKTGEARSSL 144
            IMHVVVQPSLAK+KTG+ R  L
Sbjct: 121 VIMHVVVQPSLAKSKTGDLRCRL 107

[Close]
BLAST of Carg24551 vs. TrEMBL
Match: tr|A0A2C9UJU9|A0A2C9UJU9_MANES (Membrane-anchored ubiquitin-fold protein OS=Manihot esculenta OX=3983 GN=MANES_14G048000 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.3e-38
Identity = 85/140 (60.71%), Postives = 96/140 (68.57%), Query Frame = 0 

Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKEVSFFHWASDLLLFSSA 60
           MPE+DL+DIKFRLYDGSDIGPFRYSSAST+D+LKQRIVSDWPK                 
Sbjct: 1   MPEEDLVDIKFRLYDGSDIGPFRYSSASTVDMLKQRIVSDWPK----------------- 60

Query: 61  FVFILILLFPFGTIFLYLLGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGV 120
                              GKT++PKA +EVKLISSGKIL+NNKTVGQC+ PF E  GG+
Sbjct: 61  -------------------GKTVSPKAVNEVKLISSGKILDNNKTVGQCRTPFAEVAGGI 104

Query: 121 TIMHVVVQPSLAKAKTGEAR 141
            IMHVVVQPSLAK KTG +R
Sbjct: 121 IIMHVVVQPSLAKMKTGISR 104

[Close]
BLAST of Carg24551 vs. TrEMBL
Match: tr|A0A067FAP6|A0A067FAP6_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g0327841mg PE=4 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 5.1e-38
Identity = 85/136 (62.50%), Postives = 94/136 (69.12%), Query Frame = 0 

Query: 1   MPEDDLIDIKFRLYDGSDIGPFRYSSASTIDVLKQRIVSDWPKEVSFFHWASDLLLFSSA 60
           MP+++LIDIKFRLYDGSDIGPFRYSSAST+D+LKQRIVSDWPK                 
Sbjct: 1   MPDEELIDIKFRLYDGSDIGPFRYSSASTVDMLKQRIVSDWPK----------------- 60

Query: 61  FVFILILLFPFGTIFLYLLGKTITPKAASEVKLISSGKILENNKTVGQCKLPFGEFTGGV 120
                              GKTI PKA +E+KLISSGKILENNKTVGQCK+P+GE  GGV
Sbjct: 61  -------------------GKTIVPKAVTEIKLISSGKILENNKTVGQCKIPYGEVPGGV 100

Query: 121 TIMHVVVQPSLAKAKT 137
            IMHVVVQPSLAK KT
Sbjct: 121 IIMHVVVQPSLAKTKT 100

The following BLAST results are available for this feature:
BLAST of Carg24551 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008464397.12.5e-4473.53PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis melo] >XP_0084643... [more]
XP_011650282.13.2e-4472.79PREDICTED: membrane-anchored ubiquitin-fold protein 3 [Cucumis sativus] >KGN6346... [more]
XP_022134657.11.6e-4372.06membrane-anchored ubiquitin-fold protein 3-like [Momordica charantia] >XP_022134... [more]
XP_022932445.12.7e-4370.59membrane-anchored ubiquitin-fold protein 3-like isoform X2 [Cucurbita moschata][more]
XP_022932437.12.7e-4370.59membrane-anchored ubiquitin-fold protein 3-like isoform X1 [Cucurbita moschata] ... [more]
BLAST of Carg24551 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G24990.17.7e-4059.56Ubiquitin family protein[more]
AT3G26980.18.0e-2945.93membrane-anchored ubiquitin-fold protein 4 precursor[more]
AT5G15460.11.8e-2039.52membrane-anchored ubiquitin-fold protein 2[more]
AT1G22050.11.7e-1834.85membrane-anchored ubiquitin-fold protein 6 precursor[more]
AT3G01050.11.8e-1736.89membrane-anchored ubiquitin-fold protein 1 precursor[more]
BLAST of Carg24551 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SW27|MUB3_ARATH1.4e-3859.56Membrane-anchored ubiquitin-fold protein 3 OS=Arabidopsis thaliana OX=3702 GN=MU... [more]
sp|Q9LSD8|MUB4_ARATH1.4e-2745.93Membrane-anchored ubiquitin-fold protein 4 OS=Arabidopsis thaliana OX=3702 GN=MU... [more]
sp|Q7XRU4|MUB4_ORYSJ1.6e-2341.13Membrane-anchored ubiquitin-fold protein 4 OS=Oryza sativa subsp. japonica OX=39... [more]
sp|Q8LCS8|MUB2_ARATH3.2e-1939.52Membrane-anchored ubiquitin-fold protein 2 OS=Arabidopsis thaliana OX=3702 GN=MU... [more]
sp|Q6Z8K4|MUB3_ORYSJ2.1e-1836.59Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39... [more]
BLAST of Carg24551 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CMX7|A0A1S3CMX7_CUCME1.6e-4473.53Membrane-anchored ubiquitin-fold protein OS=Cucumis melo OX=3656 GN=LOC103502298... [more]
tr|A0A0A0LNH9|A0A0A0LNH9_CUCSA2.1e-4472.79Membrane-anchored ubiquitin-fold protein OS=Cucumis sativus OX=3659 GN=Csa_1G001... [more]
tr|A0A2N9J181|A0A2N9J181_FAGSY1.1e-4062.94Membrane-anchored ubiquitin-fold protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCU... [more]
tr|A0A2C9UJU9|A0A2C9UJU9_MANES2.3e-3860.71Membrane-anchored ubiquitin-fold protein OS=Manihot esculenta OX=3983 GN=MANES_1... [more]
tr|A0A067FAP6|A0A067FAP6_CITSI5.1e-3862.50Uncharacterized protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g0327841... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-like_domsf
IPR017000MUB
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24551-RACarg24551-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13881Rad60-SLD_2coord: 6..46
e-value: 2.4E-12
score: 46.8
coord: 81..139
e-value: 1.4E-18
score: 66.9
NoneNo IPR availableGENE3DG3DSA:3.10.20.90coord: 3..54
e-value: 3.8E-12
score: 47.9
coord: 79..130
e-value: 9.5E-15
score: 56.2
NoneNo IPR availablePANTHERPTHR13169UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEINcoord: 1..46
NoneNo IPR availablePANTHERPTHR13169UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEINcoord: 80..137
NoneNo IPR availablePANTHERPTHR13169:SF3MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 3coord: 80..137
NoneNo IPR availablePANTHERPTHR13169:SF3MEMBRANE-ANCHORED UBIQUITIN-FOLD PROTEIN 3coord: 1..46
IPR017000Membrane-anchored ubiquitin-fold proteinPIRSFPIRSF032572MUBcoord: 1..53
e-value: 9.4E-15
score: 52.5
coord: 79..147
e-value: 5.6E-21
score: 72.6
IPR029071Ubiquitin-like domain superfamilySUPERFAMILYSSF54236Ubiquitin-likecoord: 85..132
coord: 2..48