Carg24516 (gene) Silver-seed gourd

NameCarg24516
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionAT-hook motif nuclear-localized protein
LocationCucurbita_argyrosperma_scaffold_121 : 229152 .. 232319 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGCTTGAAAACCCTAATGCATTCAAGTTTATTTCAATAGTTGCCACACGTGAGATTTGACCGTCTTCCTCCTAGTATTGTTGCCCGCTAAAAGAAGAAAAGTTCAGTGGACTTTCCTTTCAAAACCAAAGCATTGCTTTAGGCTTCTCCAAAATAGTTCATACCAATGATCATTCCCTAAATTGGCCGATATGGAACTTTCATCATCCAACATGTCGAACCCTAGATGAGCGGCAAAGTTTCACCTACGCTACGATTTCATAAGATTGAACGTTTTTTCTAGTCGAGGTTAAATTATTATTTATATAAAAGCTCAACAAGTATAAAATTTGTGAGTCCCATCGTAACCTAACCGAGTCGATCAATATAAAAATGGCCGTCCAAGGGTCGGATAAAGGGGACAAAAGTGGGACCCAGCCGCCGCAGGTGGAAGCGCACTCACCCAACTCCAGCCCTCCATTGTTCTTTAATTTTAAAAACAGCAAAAGAAACATAAATAAATAAATAAATAAATAAAAAGTTTGCCCTAATCTTAGTACAAAACCTTAACTCATGGTCAATTTTGTTCTAAACCCTGGTTAACTAATTTGTTTACGTCATTAAATTTCAACTAAATTAATAAAAATATCTTACCAGAAGAATACGATATTTTAAAATTTTCAATAATATTCTTATCCATGAAAAGAAAATCTAAATTATTAATATTTTGTTTCAAAAATATACCTTTTAACTTTAAATTATTTTTCTTTACCATACAATTATAATATATATATATATATATATATATAATATATATATATAATATATATATATATATTTTTTTTATCTGAATTTAATAATATTTTTTTATTAATTATTCTCCAAATATTTTTAAAAATAATTTTTAAATATTTAAACGTAATTTTTAAAAATATGAATTATAAATCTTAATTAAATATTTAAAAATAAATAACTGAAGTTTTATTAAAAATAAAAATTTGAATAAACCCTTTCTTTTTATTTTTTTTTATTTCTTTTTATTTATTTATTTTTTATAGAAAAGCAAAAATATTACCCTTCTAACTTTATTTATATATATATATAGAGAGAGAGTGACAAATTAGATATTAAGCTTTTAAATAATTATTTTTTTAACCTAAGACAACTTCAAAGGAGAAATTGCCCCACCTATTTAAAGGTAATCTAGGTAGATAATTAGTTGATTCTTTTAATTATAGTTTTAATTAAAAAATATATATGGAATAAACTAAAATTACGTCTGGAGGTGAGATCATAAAAATATGATGGTTAAGGAATACTTACGAATTGATAGATGTTATCTGAAAGTAAGTAAAAAGGGTTTTGGAATATGCGTGCAGCCACAAACAACTTACCCTATACATGCATGACCGTGTCATTTACACGCACTACAAGCAACATGCTTTGGACAAGCATGACTGTGACATCTGGCCCAACATTTAGGAGTTTTCTTAAGAAGCATGTGAGTGAAAAGATGGAACAGGCGTGAAACCACAAACAAGCAGCTACAAATAACATGTCTTAGACAAGCATGACTGTCACATCTAGCTGAACATCTAGGAGTTTTCTTAGGAAGCATGTGATGAAACAAGCGTACAATCACAGACAACTTGCCCTATACAAGCATGACTGTCACATTCACACGCGCTACAGGCAACATGTTTTGGACAAGCATGACCATGACATACGGCTCAACATCTAAGAGTTTTGTAGAAAACATGTGAGTAAAAAGATTATTGATTTGTATTGATTTGTGACAAGAGCATTGAGTAACGTAGTTACGTGGTAAAGAAGCAGGTAAACGTCAAAGCAGGACATGAAACGTTACAATAATTCAATCGATCACAACTGTGAGATCCCACATCGATTGAGGAGTAGAACGAAACATTCTTTACAAGGGTGTGAAAACCTCTCCCTAGTAGACGTGTTTTAAAAATCTCGAGGGAAATCTCGATAGTTTGAATCAAAAGCCCAAAGAGGACAATATCTGCTAACAGGTCTGAAGGAAAGCACAAAGAGGACAATATCTACTAGCAGTGGACTTGAGCCGTTACAACGACGATATAACCTTCCCGAACCGATGAAAGATTCAAATTTCTAGCCTCACGGAATCTAAACTTGTGCCACAAACAAAAGGGAAAAGAAAAAAAAAGGAAGAATAACAACAATTTGTCAACTAATTATTATTTTATAATCCATATACTTTAAGCTTAGAGAGAGAGAGAGAGGCATGGAGAGAGAAAGCTTGGGTTGTCTCTAATGGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTCATGTATTTATAATTCCAAACTCCAACAGTACCATCTCAAATTGCTCTTTAAATTCATAAAAATTTCACCTTTTTTTTAATATTATTCATAGTTTTCTGTTTAATTCCTTTTCTTTTTCATCCTTATAATAAGCTTTGAGTCCCTCCATCCATGGCTGGCCTGGATTTAAGCAATCACTATATTCACCAACTTCAAAGGCCTGATTTCAACCACCACCAACACCACCACCACCACCAGCCGCCGCCGCCGCCTCTCCACCTGATTCTCAATCGTGTCATGACACCGAATCTCATCATCTCGCCACCGATACGGTGGCGTCTCGCCGACCACGCGGTCGTCCACCCGGTTCCAAAAACAAACCAAAGCCACCGGTCATCATAACTCGAGAAAGCGCAAATACCCTAAGAGCTCATATTCTCGAGATCGGCGGTGGCTGCGACGTCTTCGATAGTATCGCTTCCTACGCTCGCCGCCGTCAGCGTGGGATCTGCATCTTGAGTGGCAGTGGAACGGTAACGAATGTCAACTTACGACAACCGACCGCGGCGGGATCTGTGTTAACCCTACAAGGTAGGTTTGAGATATTATCGCTCACTGGATCTTTCTTACCGCCACCAGCTCCTCCCGGCGCTACCAGTTTGACCATATACTTGGCTGGTGGGCAAGGGCAAGTGGTCGGCGGTAACGTCGTCGGAGAATTGATGGCGGCCGGACCAGTGACGGTGATCACCGCTTCGTTTACGAATGTAGCATACGAGAGATTGCCACTGGAAGACGAAGAACAAGAACAAGAACAAGAAAGAACAAGATCAGGTTCAGATGCAACCACCGACATCGCACGGAAACAATAA

mRNA sequence

ATGGAGCTTGAAAACCCTAATGCATTCAAGTTTATTTCAATAGTTGCCACACCCGCCGCCGCCGCCTCTCCACCTGATTCTCAATCGTGTCATGACACCGAATCTCATCATCTCGCCACCGATACGGTGGCGTCTCGCCGACCACGCGGTCGTCCACCCGGTTCCAAAAACAAACCAAAGCCACCGGTCATCATAACTCGAGAAAGCGCAAATACCCTAAGAGCTCATATTCTCGAGATCGGCGGTGGCTGCGACGTCTTCGATAGTATCGCTTCCTACGCTCGCCGCCGTCAGCGTGGGATCTGCATCTTGAGTGGCAGTGGAACGGTAACGAATGTCAACTTACGACAACCGACCGCGGCGGGATCTGTGTTAACCCTACAAGGTAGGTTTGAGATATTATCGCTCACTGGATCTTTCTTACCGCCACCAGCTCCTCCCGGCGCTACCAGTTTGACCATATACTTGGCTGGTGGGCAAGGGCAAGTGGTCGGCGGTAACGTCGTCGGAGAATTGATGGCGGCCGGACCAGTGACGGTGATCACCGCTTCGTTTACGAATGTAGCATACGAGAGATTGCCACTGGAAGACGAAGAACAAGAACAAGAACAAGAAAGAACAAGATCAGGTTCAGATGCAACCACCGACATCGCACGGAAACAATAA

Coding sequence (CDS)

ATGGAGCTTGAAAACCCTAATGCATTCAAGTTTATTTCAATAGTTGCCACACCCGCCGCCGCCGCCTCTCCACCTGATTCTCAATCGTGTCATGACACCGAATCTCATCATCTCGCCACCGATACGGTGGCGTCTCGCCGACCACGCGGTCGTCCACCCGGTTCCAAAAACAAACCAAAGCCACCGGTCATCATAACTCGAGAAAGCGCAAATACCCTAAGAGCTCATATTCTCGAGATCGGCGGTGGCTGCGACGTCTTCGATAGTATCGCTTCCTACGCTCGCCGCCGTCAGCGTGGGATCTGCATCTTGAGTGGCAGTGGAACGGTAACGAATGTCAACTTACGACAACCGACCGCGGCGGGATCTGTGTTAACCCTACAAGGTAGGTTTGAGATATTATCGCTCACTGGATCTTTCTTACCGCCACCAGCTCCTCCCGGCGCTACCAGTTTGACCATATACTTGGCTGGTGGGCAAGGGCAAGTGGTCGGCGGTAACGTCGTCGGAGAATTGATGGCGGCCGGACCAGTGACGGTGATCACCGCTTCGTTTACGAATGTAGCATACGAGAGATTGCCACTGGAAGACGAAGAACAAGAACAAGAACAAGAAAGAACAAGATCAGGTTCAGATGCAACCACCGACATCGCACGGAAACAATAA

Protein sequence

MELENPNAFKFISIVATPAAAASPPDSQSCHDTESHHLATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQEQERTRSGSDATTDIARKQ
BLAST of Carg24516 vs. NCBI nr
Match: XP_023511574.1 (AT-hook motif nuclear-localized protein 23-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 327.8 bits (839), Expect = 2.9e-86
Identity = 165/166 (99.40%), Postives = 166/166 (100.00%), Query Frame = 0

Query: 31  HDTESHHLATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSI 90
           HDTESHHLATDTVASRRPRGRPPGSKN+PKPPVIITRESANTLRAHILEIGGGCDVFDSI
Sbjct: 39  HDTESHHLATDTVASRRPRGRPPGSKNRPKPPVIITRESANTLRAHILEIGGGCDVFDSI 98

Query: 91  ASYARRRQRGICILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGAT 150
           ASYARRRQRGICILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGAT
Sbjct: 99  ASYARRRQRGICILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGAT 158

Query: 151 SLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLE 197
           SLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLE
Sbjct: 159 SLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLE 204

BLAST of Carg24516 vs. NCBI nr
Match: XP_022963487.1 (AT-hook motif nuclear-localized protein 23-like [Cucurbita moschata])

HSP 1 Score: 325.1 bits (832), Expect = 1.9e-85
Identity = 164/166 (98.80%), Postives = 164/166 (98.80%), Query Frame = 0

Query: 31  HDTESHHLATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSI 90
           HDTESHHLATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSI
Sbjct: 42  HDTESHHLATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSI 101

Query: 91  ASYARRRQRGICILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGAT 150
           ASYARRRQRGICILSGSG VTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPG T
Sbjct: 102 ASYARRRQRGICILSGSGMVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGTT 161

Query: 151 SLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLE 197
           SLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLE
Sbjct: 162 SLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLE 207

BLAST of Carg24516 vs. NCBI nr
Match: XP_022967427.1 (AT-hook motif nuclear-localized protein 23-like [Cucurbita maxima])

HSP 1 Score: 315.8 bits (808), Expect = 1.1e-82
Identity = 159/164 (96.95%), Postives = 162/164 (98.78%), Query Frame = 0

Query: 33  TESHHLATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIAS 92
           TESHH +TD VASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIAS
Sbjct: 43  TESHHPSTDMVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIAS 102

Query: 93  YARRRQRGICILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGATSL 152
           YARRRQRGICILSG+GTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGATSL
Sbjct: 103 YARRRQRGICILSGTGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGATSL 162

Query: 153 TIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLE 197
           TIYLAGGQGQVVGGNV+GELMAAGPVTVITASFTNVAYERLPLE
Sbjct: 163 TIYLAGGQGQVVGGNVIGELMAAGPVTVITASFTNVAYERLPLE 206

BLAST of Carg24516 vs. NCBI nr
Match: XP_022931229.1 (AT-hook motif nuclear-localized protein 23-like [Cucurbita moschata])

HSP 1 Score: 283.1 bits (723), Expect = 8.1e-73
Identity = 146/181 (80.66%), Postives = 154/181 (85.08%), Query Frame = 0

Query: 25  PDSQSCHDTESHH---------LATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRA 84
           PDSQS H+ ES            ATD V SRRPRGRP GSKNKPKPPVIITRESANTLRA
Sbjct: 28  PDSQSHHEDESDQPLDFVSAAPAATDMVVSRRPRGRPAGSKNKPKPPVIITRESANTLRA 87

Query: 85  HILEIGGGCDVFDSIASYARRRQRGICILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILS 144
           HI E+G GCDVFDSIA YARRRQRGICIL+ +G VTN+NLRQPT  G+VL LQGRFEILS
Sbjct: 88  HIFEVGSGCDVFDSIAIYARRRQRGICILNANGMVTNLNLRQPTGTGAVLNLQGRFEILS 147

Query: 145 LTGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPL 197
           LTGSFLPPPAPPGATSLTIYLAGG+GQVVGGNVVGEL+AAGPVTVI ASF NVAYERLPL
Sbjct: 148 LTGSFLPPPAPPGATSLTIYLAGGEGQVVGGNVVGELVAAGPVTVIVASFANVAYERLPL 207

BLAST of Carg24516 vs. NCBI nr
Match: XP_022995518.1 (AT-hook motif nuclear-localized protein 23-like [Cucurbita maxima])

HSP 1 Score: 282.7 bits (722), Expect = 1.1e-72
Identity = 145/178 (81.46%), Postives = 153/178 (85.96%), Query Frame = 0

Query: 25  PDSQSCHDTESHH------LATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHIL 84
           PD+QS H+ ES         ATD   SRRPRGRP GSKNKPKPPVIITRESANTLRAHI 
Sbjct: 28  PDTQSDHEDESDQPLDFVSAATDMAVSRRPRGRPAGSKNKPKPPVIITRESANTLRAHIF 87

Query: 85  EIGGGCDVFDSIASYARRRQRGICILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILSLTG 144
           E+G GCDVFDSIA YARRRQRGICIL+ +G VTN+NLRQPT  G+VL LQGRFEILSLTG
Sbjct: 88  EVGSGCDVFDSIAIYARRRQRGICILNANGMVTNLNLRQPTGTGAVLNLQGRFEILSLTG 147

Query: 145 SFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLE 197
           SFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGEL+AAGPVTVI ASF NVAYERLPLE
Sbjct: 148 SFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELVAAGPVTVIVASFANVAYERLPLE 205

BLAST of Carg24516 vs. TAIR10
Match: AT2G35270.1 (Predicted AT-hook DNA-binding family protein)

HSP 1 Score: 260.4 bits (664), Expect = 1.0e-69
Identity = 126/149 (84.56%), Postives = 142/149 (95.30%), Query Frame = 0

Query: 48  PRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICILSGS 107
           PRGRP GSKNKPKPPVI+TRESANTLRAHILE+G GCDVF+ I++YARRRQRGIC+LSG+
Sbjct: 80  PRGRPAGSKNKPKPPVIVTRESANTLRAHILEVGSGCDVFECISTYARRRQRGICVLSGT 139

Query: 108 GTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQVVGGN 167
           GTVTNV++RQPTAAG+V+TL+G FEILSL+GSFLPPPAPPGATSLTI+LAG QGQVVGGN
Sbjct: 140 GTVTNVSIRQPTAAGAVVTLRGTFEILSLSGSFLPPPAPPGATSLTIFLAGAQGQVVGGN 199

Query: 168 VVGELMAAGPVTVITASFTNVAYERLPLE 197
           VVGELMAAGPV V+ ASFTNVAYERLPL+
Sbjct: 200 VVGELMAAGPVMVMAASFTNVAYERLPLD 228

BLAST of Carg24516 vs. TAIR10
Match: AT4G17800.1 (Predicted AT-hook DNA-binding family protein)

HSP 1 Score: 249.6 bits (636), Expect = 1.8e-66
Identity = 123/142 (86.62%), Postives = 135/142 (95.07%), Query Frame = 0

Query: 55  SKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICILSGSGTVTNVN 114
           SKNKPKPPVIITRESANTLRAHILE+  GCDVFD +A+YARRRQRGIC+LSGSGTVTNV+
Sbjct: 91  SKNKPKPPVIITRESANTLRAHILEVTNGCDVFDCVATYARRRQRGICVLSGSGTVTNVS 150

Query: 115 LRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELMA 174
           +RQP+AAG+V+TLQG FEILSL+GSFLPPPAPPGATSLTI+LAGGQGQVVGG+VVGEL A
Sbjct: 151 IRQPSAAGAVVTLQGTFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGSVVGELTA 210

Query: 175 AGPVTVITASFTNVAYERLPLE 197
           AGPV VI ASFTNVAYERLPLE
Sbjct: 211 AGPVIVIAASFTNVAYERLPLE 232

BLAST of Carg24516 vs. TAIR10
Match: AT4G22810.1 (Predicted AT-hook DNA-binding family protein)

HSP 1 Score: 232.3 bits (591), Expect = 3.0e-61
Identity = 110/155 (70.97%), Postives = 135/155 (87.10%), Query Frame = 0

Query: 45  SRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICIL 104
           +RRPRGRP GSKNKPKPP+IITR+SAN LR H++EIG GCD+ +S+A++ARRRQRG+C++
Sbjct: 104 TRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEIGDGCDLVESVATFARRRQRGVCVM 163

Query: 105 SGSGTVTNVNLRQP---TAAGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQG 164
           SG+G VTNV +RQP    + GSV++L GRFEILSL+GSFLPPPAPP AT L++YLAGGQG
Sbjct: 164 SGTGNVTNVTIRQPGSHPSPGSVVSLHGRFEILSLSGSFLPPPAPPTATGLSVYLAGGQG 223

Query: 165 QVVGGNVVGELMAAGPVTVITASFTNVAYERLPLE 197
           QVVGG+VVG L+ AGPV V+ ASF+N AYERLPLE
Sbjct: 224 QVVGGSVVGPLLCAGPVVVMAASFSNAAYERLPLE 258

BLAST of Carg24516 vs. TAIR10
Match: AT4G12050.1 (Predicted AT-hook DNA-binding family protein)

HSP 1 Score: 229.6 bits (584), Expect = 1.9e-60
Identity = 108/153 (70.59%), Postives = 134/153 (87.58%), Query Frame = 0

Query: 45  SRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICIL 104
           +RRPRGRP GSKNKPK P+IITR+SAN LR H++EIG GCD+ D +A++ARRRQRG+C++
Sbjct: 117 TRRPRGRPAGSKNKPKAPIIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQRGVCVM 176

Query: 105 SGSGTVTNVNLRQP-TAAGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQV 164
           SG+G+VTNV +RQP +  GSV++L GRFEILSL+GSFLPPPAPP AT L++YLAGGQGQV
Sbjct: 177 SGTGSVTNVTIRQPGSPPGSVVSLHGRFEILSLSGSFLPPPAPPAATGLSVYLAGGQGQV 236

Query: 165 VGGNVVGELMAAGPVTVITASFTNVAYERLPLE 197
           VGG+VVG L+ +GPV V+ ASF+N AYERLPLE
Sbjct: 237 VGGSVVGPLLCSGPVVVMAASFSNAAYERLPLE 269

BLAST of Carg24516 vs. TAIR10
Match: AT2G45430.1 (AT-hook motif nuclear-localized protein 22)

HSP 1 Score: 223.8 bits (569), Expect = 1.1e-58
Identity = 107/153 (69.93%), Postives = 128/153 (83.66%), Query Frame = 0

Query: 48  PRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICILSGS 107
           PRGRP GSKNKPKPP+IITR+SAN L++H++E+  GCDV +S+  +ARRRQRGIC+LSG+
Sbjct: 91  PRGRPAGSKNKPKPPIIITRDSANALKSHVMEVANGCDVMESVTVFARRRQRGICVLSGN 150

Query: 108 GTVTNVNLRQPTA----AGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQV 167
           G VTNV +RQP +      SV+ L GRFEILSL+GSFLPPPAPP A+ LTIYLAGGQGQV
Sbjct: 151 GAVTNVTIRQPASVPGGGSSVVNLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQV 210

Query: 168 VGGNVVGELMAAGPVTVITASFTNVAYERLPLE 197
           VGG+VVG LMA+GPV ++ ASF N AYERLPLE
Sbjct: 211 VGGSVVGPLMASGPVVIMAASFGNAAYERLPLE 243

BLAST of Carg24516 vs. Swiss-Prot
Match: sp|O82166|AHL21_ARATH (AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AHL21 PE=2 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.8e-68
Identity = 126/149 (84.56%), Postives = 142/149 (95.30%), Query Frame = 0

Query: 48  PRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICILSGS 107
           PRGRP GSKNKPKPPVI+TRESANTLRAHILE+G GCDVF+ I++YARRRQRGIC+LSG+
Sbjct: 80  PRGRPAGSKNKPKPPVIVTRESANTLRAHILEVGSGCDVFECISTYARRRQRGICVLSGT 139

Query: 108 GTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQVVGGN 167
           GTVTNV++RQPTAAG+V+TL+G FEILSL+GSFLPPPAPPGATSLTI+LAG QGQVVGGN
Sbjct: 140 GTVTNVSIRQPTAAGAVVTLRGTFEILSLSGSFLPPPAPPGATSLTIFLAGAQGQVVGGN 199

Query: 168 VVGELMAAGPVTVITASFTNVAYERLPLE 197
           VVGELMAAGPV V+ ASFTNVAYERLPL+
Sbjct: 200 VVGELMAAGPVMVMAASFTNVAYERLPLD 228

BLAST of Carg24516 vs. Swiss-Prot
Match: sp|O23620|AHL23_ARATH (AT-hook motif nuclear-localized protein 23 OS=Arabidopsis thaliana OX=3702 GN=AHL23 PE=1 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 3.2e-65
Identity = 123/142 (86.62%), Postives = 135/142 (95.07%), Query Frame = 0

Query: 55  SKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICILSGSGTVTNVN 114
           SKNKPKPPVIITRESANTLRAHILE+  GCDVFD +A+YARRRQRGIC+LSGSGTVTNV+
Sbjct: 91  SKNKPKPPVIITRESANTLRAHILEVTNGCDVFDCVATYARRRQRGICVLSGSGTVTNVS 150

Query: 115 LRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELMA 174
           +RQP+AAG+V+TLQG FEILSL+GSFLPPPAPPGATSLTI+LAGGQGQVVGG+VVGEL A
Sbjct: 151 IRQPSAAGAVVTLQGTFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGSVVGELTA 210

Query: 175 AGPVTVITASFTNVAYERLPLE 197
           AGPV VI ASFTNVAYERLPLE
Sbjct: 211 AGPVIVIAASFTNVAYERLPLE 232

BLAST of Carg24516 vs. Swiss-Prot
Match: sp|O49662|AHL24_ARATH (AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AHL24 PE=2 SV=1)

HSP 1 Score: 232.3 bits (591), Expect = 5.4e-60
Identity = 110/155 (70.97%), Postives = 135/155 (87.10%), Query Frame = 0

Query: 45  SRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICIL 104
           +RRPRGRP GSKNKPKPP+IITR+SAN LR H++EIG GCD+ +S+A++ARRRQRG+C++
Sbjct: 104 TRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEIGDGCDLVESVATFARRRQRGVCVM 163

Query: 105 SGSGTVTNVNLRQP---TAAGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQG 164
           SG+G VTNV +RQP    + GSV++L GRFEILSL+GSFLPPPAPP AT L++YLAGGQG
Sbjct: 164 SGTGNVTNVTIRQPGSHPSPGSVVSLHGRFEILSLSGSFLPPPAPPTATGLSVYLAGGQG 223

Query: 165 QVVGGNVVGELMAAGPVTVITASFTNVAYERLPLE 197
           QVVGG+VVG L+ AGPV V+ ASF+N AYERLPLE
Sbjct: 224 QVVGGSVVGPLLCAGPVVVMAASFSNAAYERLPLE 258

BLAST of Carg24516 vs. Swiss-Prot
Match: sp|Q9SZ70|AHL26_ARATH (AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AHL26 PE=2 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 3.5e-59
Identity = 108/153 (70.59%), Postives = 134/153 (87.58%), Query Frame = 0

Query: 45  SRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICIL 104
           +RRPRGRP GSKNKPK P+IITR+SAN LR H++EIG GCD+ D +A++ARRRQRG+C++
Sbjct: 117 TRRPRGRPAGSKNKPKAPIIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQRGVCVM 176

Query: 105 SGSGTVTNVNLRQP-TAAGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQV 164
           SG+G+VTNV +RQP +  GSV++L GRFEILSL+GSFLPPPAPP AT L++YLAGGQGQV
Sbjct: 177 SGTGSVTNVTIRQPGSPPGSVVSLHGRFEILSLSGSFLPPPAPPAATGLSVYLAGGQGQV 236

Query: 165 VGGNVVGELMAAGPVTVITASFTNVAYERLPLE 197
           VGG+VVG L+ +GPV V+ ASF+N AYERLPLE
Sbjct: 237 VGGSVVGPLLCSGPVVVMAASFSNAAYERLPLE 269

BLAST of Carg24516 vs. Swiss-Prot
Match: sp|O22130|AHL22_ARATH (AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AHL22 PE=1 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.9e-57
Identity = 107/153 (69.93%), Postives = 128/153 (83.66%), Query Frame = 0

Query: 48  PRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICILSGS 107
           PRGRP GSKNKPKPP+IITR+SAN L++H++E+  GCDV +S+  +ARRRQRGIC+LSG+
Sbjct: 91  PRGRPAGSKNKPKPPIIITRDSANALKSHVMEVANGCDVMESVTVFARRRQRGICVLSGN 150

Query: 108 GTVTNVNLRQPTA----AGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQV 167
           G VTNV +RQP +      SV+ L GRFEILSL+GSFLPPPAPP A+ LTIYLAGGQGQV
Sbjct: 151 GAVTNVTIRQPASVPGGGSSVVNLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQV 210

Query: 168 VGGNVVGELMAAGPVTVITASFTNVAYERLPLE 197
           VGG+VVG LMA+GPV ++ ASF N AYERLPLE
Sbjct: 211 VGGSVVGPLMASGPVVIMAASFGNAAYERLPLE 243

BLAST of Carg24516 vs. TrEMBL
Match: tr|A0A2I0ISB9|A0A2I0ISB9_PUNGR (AT-hook motif nuclear-localized protein OS=Punica granatum OX=22663 GN=CRG98_032700 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 2.9e-71
Identity = 135/154 (87.66%), Postives = 147/154 (95.45%), Query Frame = 0

Query: 43  VASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGIC 102
           + +RRPRGRPPGSKNKPKPPVIITRESANTLRAHILE+G GCDVF+S+A+YARRRQRGIC
Sbjct: 58  IVARRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGSGCDVFESVATYARRRQRGIC 117

Query: 103 ILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQ 162
           +LSGSGTVTNV+LRQP AAGSV+TL GRFEILSL+GSFLPPPAPPGATSLT++LAGGQGQ
Sbjct: 118 VLSGSGTVTNVSLRQPAAAGSVVTLHGRFEILSLSGSFLPPPAPPGATSLTVFLAGGQGQ 177

Query: 163 VVGGNVVGELMAAGPVTVITASFTNVAYERLPLE 197
           VVGGNVVGEL AAGPV VI ASFTNVAYERLPLE
Sbjct: 178 VVGGNVVGELTAAGPVIVIAASFTNVAYERLPLE 211

BLAST of Carg24516 vs. TrEMBL
Match: tr|A0A0D2P3B8|A0A0D2P3B8_GOSRA (AT-hook motif nuclear-localized protein OS=Gossypium raimondii OX=29730 GN=B456_003G181200 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 5.0e-71
Identity = 137/154 (88.96%), Postives = 146/154 (94.81%), Query Frame = 0

Query: 43  VASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGIC 102
           + +RRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIG GCDVFD IA+YARRRQRGIC
Sbjct: 51  LVARRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGNGCDVFDCIANYARRRQRGIC 110

Query: 103 ILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQ 162
           ILSGSGTVTNV +RQP+A GSV+TL GRFEILSL+GSFLPPPAPPGATSLTI+LAGGQGQ
Sbjct: 111 ILSGSGTVTNVTIRQPSATGSVVTLHGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQ 170

Query: 163 VVGGNVVGELMAAGPVTVITASFTNVAYERLPLE 197
           VVGGNVVGELMAAGPV VI +SFTNVAYERLPLE
Sbjct: 171 VVGGNVVGELMAAGPVIVIASSFTNVAYERLPLE 204

BLAST of Carg24516 vs. TrEMBL
Match: tr|A0A1S3CQ43|A0A1S3CQ43_CUCME (AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103503535 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 6.5e-71
Identity = 137/148 (92.57%), Postives = 143/148 (96.62%), Query Frame = 0

Query: 49  RGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICILSGSG 108
           RGRPPGSKNKPKPPVIITRESANTLRAHILE+G GCDVFDSIA+YARRRQRGICILSG+G
Sbjct: 66  RGRPPGSKNKPKPPVIITRESANTLRAHILEVGSGCDVFDSIATYARRRQRGICILSGNG 125

Query: 109 TVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQVVGGNV 168
            V NVNLRQPTA GSVLTLQGRFEILSL+GSFLPPPAPPGATSLTIYLAGGQGQVVGGNV
Sbjct: 126 MVNNVNLRQPTATGSVLTLQGRFEILSLSGSFLPPPAPPGATSLTIYLAGGQGQVVGGNV 185

Query: 169 VGELMAAGPVTVITASFTNVAYERLPLE 197
           VGEL+AAGPVT+I ASFTNVAYERLPLE
Sbjct: 186 VGELVAAGPVTIIAASFTNVAYERLPLE 213

BLAST of Carg24516 vs. TrEMBL
Match: tr|A0A2P5QYE3|A0A2P5QYE3_GOSBA (AT-hook motif nuclear-localized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD23510 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 6.5e-71
Identity = 137/156 (87.82%), Postives = 146/156 (93.59%), Query Frame = 0

Query: 41  DTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRG 100
           D + +RRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIG GCDVFD IA+YARRRQRG
Sbjct: 49  DDLVARRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGNGCDVFDCIANYARRRQRG 108

Query: 101 ICILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQ 160
           ICILSGSGTVTNV +RQP+  GSV+TL GRFEILSL+GSFLPPPAPPGATSLTI+LAGGQ
Sbjct: 109 ICILSGSGTVTNVTIRQPSETGSVVTLHGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQ 168

Query: 161 GQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLE 197
           GQVVGGNVVGELMAAGPV VI +SFTNVAYERLPLE
Sbjct: 169 GQVVGGNVVGELMAAGPVIVIASSFTNVAYERLPLE 204

BLAST of Carg24516 vs. TrEMBL
Match: tr|A0A2U1LUN0|A0A2U1LUN0_ARTAN (Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA416630 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 8.5e-71
Identity = 137/160 (85.62%), Postives = 149/160 (93.12%), Query Frame = 0

Query: 37  HLATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARR 96
           H +   V+ RRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIG G DVF+S+A+YAR+
Sbjct: 28  HSSGGDVSGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGSGFDVFESVATYARK 87

Query: 97  RQRGICILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYL 156
           RQRGICILSGSGTVTNV+LRQPTAAGSVL LQGRFEILSL+GSFLPPPAPPGATSLT++L
Sbjct: 88  RQRGICILSGSGTVTNVSLRQPTAAGSVLALQGRFEILSLSGSFLPPPAPPGATSLTVFL 147

Query: 157 AGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLE 197
           AGGQGQVVGGNV+GEL AAGPV VI +SFTNVAYERLPLE
Sbjct: 148 AGGQGQVVGGNVIGELTAAGPVIVIASSFTNVAYERLPLE 187

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_023511574.12.9e-8699.40AT-hook motif nuclear-localized protein 23-like [Cucurbita pepo subsp. pepo][more]
XP_022963487.11.9e-8598.80AT-hook motif nuclear-localized protein 23-like [Cucurbita moschata][more]
XP_022967427.11.1e-8296.95AT-hook motif nuclear-localized protein 23-like [Cucurbita maxima][more]
XP_022931229.18.1e-7380.66AT-hook motif nuclear-localized protein 23-like [Cucurbita moschata][more]
XP_022995518.11.1e-7281.46AT-hook motif nuclear-localized protein 23-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT2G35270.11.0e-6984.56Predicted AT-hook DNA-binding family protein[more]
AT4G17800.11.8e-6686.62Predicted AT-hook DNA-binding family protein[more]
AT4G22810.13.0e-6170.97Predicted AT-hook DNA-binding family protein[more]
AT4G12050.11.9e-6070.59Predicted AT-hook DNA-binding family protein[more]
AT2G45430.11.1e-5869.93AT-hook motif nuclear-localized protein 22[more]
Match NameE-valueIdentityDescription
sp|O82166|AHL21_ARATH1.8e-6884.56AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AH... [more]
sp|O23620|AHL23_ARATH3.2e-6586.62AT-hook motif nuclear-localized protein 23 OS=Arabidopsis thaliana OX=3702 GN=AH... [more]
sp|O49662|AHL24_ARATH5.4e-6070.97AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AH... [more]
sp|Q9SZ70|AHL26_ARATH3.5e-5970.59AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AH... [more]
sp|O22130|AHL22_ARATH1.9e-5769.93AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AH... [more]
Match NameE-valueIdentityDescription
tr|A0A2I0ISB9|A0A2I0ISB9_PUNGR2.9e-7187.66AT-hook motif nuclear-localized protein OS=Punica granatum OX=22663 GN=CRG98_032... [more]
tr|A0A0D2P3B8|A0A0D2P3B8_GOSRA5.0e-7188.96AT-hook motif nuclear-localized protein OS=Gossypium raimondii OX=29730 GN=B456_... [more]
tr|A0A1S3CQ43|A0A1S3CQ43_CUCME6.5e-7192.57AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103503535 ... [more]
tr|A0A2P5QYE3|A0A2P5QYE3_GOSBA6.5e-7187.82AT-hook motif nuclear-localized protein OS=Gossypium barbadense OX=3634 GN=GOBAR... [more]
tr|A0A2U1LUN0|A0A2U1LUN0_ARTAN8.5e-7185.63Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA416630 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR005175PPC_dom
IPR014476AT-hook_nuclear
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24516-RACarg24516-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3DG3DSA:3.30.1330.80coord: 73..203
e-value: 3.2E-10
score: 42.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..221
NoneNo IPR availablePANTHERPTHR31100:SF21SUBFAMILY NOT NAMEDcoord: 41..212
NoneNo IPR availablePANTHERPTHR31100FAMILY NOT NAMEDcoord: 41..212
NoneNo IPR availableSUPERFAMILYSSF117856AF0104/ALDC/Ptd012-likecoord: 70..199
IPR014476AT-hook motif nuclear-localized proteinPIRSFPIRSF016021ESCAROLAcoord: 17..221
e-value: 1.9E-98
score: 327.2
IPR005175PPC domainPFAMPF03479DUF296coord: 74..186
e-value: 6.8E-29
score: 100.2
IPR005175PPC domainPROSITEPS51742PPCcoord: 70..208
score: 38.269
IPR005175PPC domainCDDcd11378DUF296coord: 74..157
e-value: 5.21585E-20
score: 81.0926

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg24516Carg26191Silver-seed gourdcarcarB487
Carg24516Carg08834Silver-seed gourdcarcarB612