Carg24516 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCTTGAAAACCCTAATGCATTCAAGTTTATTTCAATAGTTGCCACACGTGAGATTTGACCGTCTTCCTCCTAGTATTGTTGCCCGCTAAAAGAAGAAAAGTTCAGTGGACTTTCCTTTCAAAACCAAAGCATTGCTTTAGGCTTCTCCAAAATAGTTCATACCAATGATCATTCCCTAAATTGGCCGATATGGAACTTTCATCATCCAACATGTCGAACCCTAGATGAGCGGCAAAGTTTCACCTACGCTACGATTTCATAAGATTGAACGTTTTTTCTAGTCGAGGTTAAATTATTATTTATATAAAAGCTCAACAAGTATAAAATTTGTGAGTCCCATCGTAACCTAACCGAGTCGATCAATATAAAAATGGCCGTCCAAGGGTCGGATAAAGGGGACAAAAGTGGGACCCAGCCGCCGCAGGTGGAAGCGCACTCACCCAACTCCAGCCCTCCATTGTTCTTTAATTTTAAAAACAGCAAAAGAAACATAAATAAATAAATAAATAAATAAAAAGTTTGCCCTAATCTTAGTACAAAACCTTAACTCATGGTCAATTTTGTTCTAAACCCTGGTTAACTAATTTGTTTACGTCATTAAATTTCAACTAAATTAATAAAAATATCTTACCAGAAGAATACGATATTTTAAAATTTTCAATAATATTCTTATCCATGAAAAGAAAATCTAAATTATTAATATTTTGTTTCAAAAATATACCTTTTAACTTTAAATTATTTTTCTTTACCATACAATTATAATATATATATATATATATATATATAATATATATATATAATATATATATATATATTTTTTTTATCTGAATTTAATAATATTTTTTTATTAATTATTCTCCAAATATTTTTAAAAATAATTTTTAAATATTTAAACGTAATTTTTAAAAATATGAATTATAAATCTTAATTAAATATTTAAAAATAAATAACTGAAGTTTTATTAAAAATAAAAATTTGAATAAACCCTTTCTTTTTATTTTTTTTTATTTCTTTTTATTTATTTATTTTTTATAGAAAAGCAAAAATATTACCCTTCTAACTTTATTTATATATATATATAGAGAGAGAGTGACAAATTAGATATTAAGCTTTTAAATAATTATTTTTTTAACCTAAGACAACTTCAAAGGAGAAATTGCCCCACCTATTTAAAGGTAATCTAGGTAGATAATTAGTTGATTCTTTTAATTATAGTTTTAATTAAAAAATATATATGGAATAAACTAAAATTACGTCTGGAGGTGAGATCATAAAAATATGATGGTTAAGGAATACTTACGAATTGATAGATGTTATCTGAAAGTAAGTAAAAAGGGTTTTGGAATATGCGTGCAGCCACAAACAACTTACCCTATACATGCATGACCGTGTCATTTACACGCACTACAAGCAACATGCTTTGGACAAGCATGACTGTGACATCTGGCCCAACATTTAGGAGTTTTCTTAAGAAGCATGTGAGTGAAAAGATGGAACAGGCGTGAAACCACAAACAAGCAGCTACAAATAACATGTCTTAGACAAGCATGACTGTCACATCTAGCTGAACATCTAGGAGTTTTCTTAGGAAGCATGTGATGAAACAAGCGTACAATCACAGACAACTTGCCCTATACAAGCATGACTGTCACATTCACACGCGCTACAGGCAACATGTTTTGGACAAGCATGACCATGACATACGGCTCAACATCTAAGAGTTTTGTAGAAAACATGTGAGTAAAAAGATTATTGATTTGTATTGATTTGTGACAAGAGCATTGAGTAACGTAGTTACGTGGTAAAGAAGCAGGTAAACGTCAAAGCAGGACATGAAACGTTACAATAATTCAATCGATCACAACTGTGAGATCCCACATCGATTGAGGAGTAGAACGAAACATTCTTTACAAGGGTGTGAAAACCTCTCCCTAGTAGACGTGTTTTAAAAATCTCGAGGGAAATCTCGATAGTTTGAATCAAAAGCCCAAAGAGGACAATATCTGCTAACAGGTCTGAAGGAAAGCACAAAGAGGACAATATCTACTAGCAGTGGACTTGAGCCGTTACAACGACGATATAACCTTCCCGAACCGATGAAAGATTCAAATTTCTAGCCTCACGGAATCTAAACTTGTGCCACAAACAAAAGGGAAAAGAAAAAAAAAGGAAGAATAACAACAATTTGTCAACTAATTATTATTTTATAATCCATATACTTTAAGCTTAGAGAGAGAGAGAGAGGCATGGAGAGAGAAAGCTTGGGTTGTCTCTAATGGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTCATGTATTTATAATTCCAAACTCCAACAGTACCATCTCAAATTGCTCTTTAAATTCATAAAAATTTCACCTTTTTTTTAATATTATTCATAGTTTTCTGTTTAATTCCTTTTCTTTTTCATCCTTATAATAAGCTTTGAGTCCCTCCATCCATGGCTGGCCTGGATTTAAGCAATCACTATATTCACCAACTTCAAAGGCCTGATTTCAACCACCACCAACACCACCACCACCACCAGCCGCCGCCGCCGCCTCTCCACCTGATTCTCAATCGTGTCATGACACCGAATCTCATCATCTCGCCACCGATACGGTGGCGTCTCGCCGACCACGCGGTCGTCCACCCGGTTCCAAAAACAAACCAAAGCCACCGGTCATCATAACTCGAGAAAGCGCAAATACCCTAAGAGCTCATATTCTCGAGATCGGCGGTGGCTGCGACGTCTTCGATAGTATCGCTTCCTACGCTCGCCGCCGTCAGCGTGGGATCTGCATCTTGAGTGGCAGTGGAACGGTAACGAATGTCAACTTACGACAACCGACCGCGGCGGGATCTGTGTTAACCCTACAAGGTAGGTTTGAGATATTATCGCTCACTGGATCTTTCTTACCGCCACCAGCTCCTCCCGGCGCTACCAGTTTGACCATATACTTGGCTGGTGGGCAAGGGCAAGTGGTCGGCGGTAACGTCGTCGGAGAATTGATGGCGGCCGGACCAGTGACGGTGATCACCGCTTCGTTTACGAATGTAGCATACGAGAGATTGCCACTGGAAGACGAAGAACAAGAACAAGAACAAGAAAGAACAAGATCAGGTTCAGATGCAACCACCGACATCGCACGGAAACAATAA ATGGAGCTTGAAAACCCTAATGCATTCAAGTTTATTTCAATAGTTGCCACACCCGCCGCCGCCGCCTCTCCACCTGATTCTCAATCGTGTCATGACACCGAATCTCATCATCTCGCCACCGATACGGTGGCGTCTCGCCGACCACGCGGTCGTCCACCCGGTTCCAAAAACAAACCAAAGCCACCGGTCATCATAACTCGAGAAAGCGCAAATACCCTAAGAGCTCATATTCTCGAGATCGGCGGTGGCTGCGACGTCTTCGATAGTATCGCTTCCTACGCTCGCCGCCGTCAGCGTGGGATCTGCATCTTGAGTGGCAGTGGAACGGTAACGAATGTCAACTTACGACAACCGACCGCGGCGGGATCTGTGTTAACCCTACAAGGTAGGTTTGAGATATTATCGCTCACTGGATCTTTCTTACCGCCACCAGCTCCTCCCGGCGCTACCAGTTTGACCATATACTTGGCTGGTGGGCAAGGGCAAGTGGTCGGCGGTAACGTCGTCGGAGAATTGATGGCGGCCGGACCAGTGACGGTGATCACCGCTTCGTTTACGAATGTAGCATACGAGAGATTGCCACTGGAAGACGAAGAACAAGAACAAGAACAAGAAAGAACAAGATCAGGTTCAGATGCAACCACCGACATCGCACGGAAACAATAA ATGGAGCTTGAAAACCCTAATGCATTCAAGTTTATTTCAATAGTTGCCACACCCGCCGCCGCCGCCTCTCCACCTGATTCTCAATCGTGTCATGACACCGAATCTCATCATCTCGCCACCGATACGGTGGCGTCTCGCCGACCACGCGGTCGTCCACCCGGTTCCAAAAACAAACCAAAGCCACCGGTCATCATAACTCGAGAAAGCGCAAATACCCTAAGAGCTCATATTCTCGAGATCGGCGGTGGCTGCGACGTCTTCGATAGTATCGCTTCCTACGCTCGCCGCCGTCAGCGTGGGATCTGCATCTTGAGTGGCAGTGGAACGGTAACGAATGTCAACTTACGACAACCGACCGCGGCGGGATCTGTGTTAACCCTACAAGGTAGGTTTGAGATATTATCGCTCACTGGATCTTTCTTACCGCCACCAGCTCCTCCCGGCGCTACCAGTTTGACCATATACTTGGCTGGTGGGCAAGGGCAAGTGGTCGGCGGTAACGTCGTCGGAGAATTGATGGCGGCCGGACCAGTGACGGTGATCACCGCTTCGTTTACGAATGTAGCATACGAGAGATTGCCACTGGAAGACGAAGAACAAGAACAAGAACAAGAAAGAACAAGATCAGGTTCAGATGCAACCACCGACATCGCACGGAAACAATAA MELENPNAFKFISIVATPAAAASPPDSQSCHDTESHHLATDTVASRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEIGGGCDVFDSIASYARRRQRGICILSGSGTVTNVNLRQPTAAGSVLTLQGRFEILSLTGSFLPPPAPPGATSLTIYLAGGQGQVVGGNVVGELMAAGPVTVITASFTNVAYERLPLEDEEQEQEQERTRSGSDATTDIARKQ
BLAST of Carg24516 vs. NCBI nr
Match: XP_023511574.1 (AT-hook motif nuclear-localized protein 23-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 327.8 bits (839), Expect = 2.9e-86 Identity = 165/166 (99.40%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of Carg24516 vs. NCBI nr
Match: XP_022963487.1 (AT-hook motif nuclear-localized protein 23-like [Cucurbita moschata]) HSP 1 Score: 325.1 bits (832), Expect = 1.9e-85 Identity = 164/166 (98.80%), Postives = 164/166 (98.80%), Query Frame = 0
BLAST of Carg24516 vs. NCBI nr
Match: XP_022967427.1 (AT-hook motif nuclear-localized protein 23-like [Cucurbita maxima]) HSP 1 Score: 315.8 bits (808), Expect = 1.1e-82 Identity = 159/164 (96.95%), Postives = 162/164 (98.78%), Query Frame = 0
BLAST of Carg24516 vs. NCBI nr
Match: XP_022931229.1 (AT-hook motif nuclear-localized protein 23-like [Cucurbita moschata]) HSP 1 Score: 283.1 bits (723), Expect = 8.1e-73 Identity = 146/181 (80.66%), Postives = 154/181 (85.08%), Query Frame = 0
BLAST of Carg24516 vs. NCBI nr
Match: XP_022995518.1 (AT-hook motif nuclear-localized protein 23-like [Cucurbita maxima]) HSP 1 Score: 282.7 bits (722), Expect = 1.1e-72 Identity = 145/178 (81.46%), Postives = 153/178 (85.96%), Query Frame = 0
BLAST of Carg24516 vs. TAIR10
Match: AT2G35270.1 (Predicted AT-hook DNA-binding family protein) HSP 1 Score: 260.4 bits (664), Expect = 1.0e-69 Identity = 126/149 (84.56%), Postives = 142/149 (95.30%), Query Frame = 0
BLAST of Carg24516 vs. TAIR10
Match: AT4G17800.1 (Predicted AT-hook DNA-binding family protein) HSP 1 Score: 249.6 bits (636), Expect = 1.8e-66 Identity = 123/142 (86.62%), Postives = 135/142 (95.07%), Query Frame = 0
BLAST of Carg24516 vs. TAIR10
Match: AT4G22810.1 (Predicted AT-hook DNA-binding family protein) HSP 1 Score: 232.3 bits (591), Expect = 3.0e-61 Identity = 110/155 (70.97%), Postives = 135/155 (87.10%), Query Frame = 0
BLAST of Carg24516 vs. TAIR10
Match: AT4G12050.1 (Predicted AT-hook DNA-binding family protein) HSP 1 Score: 229.6 bits (584), Expect = 1.9e-60 Identity = 108/153 (70.59%), Postives = 134/153 (87.58%), Query Frame = 0
BLAST of Carg24516 vs. TAIR10
Match: AT2G45430.1 (AT-hook motif nuclear-localized protein 22) HSP 1 Score: 223.8 bits (569), Expect = 1.1e-58 Identity = 107/153 (69.93%), Postives = 128/153 (83.66%), Query Frame = 0
BLAST of Carg24516 vs. Swiss-Prot
Match: sp|O82166|AHL21_ARATH (AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AHL21 PE=2 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 1.8e-68 Identity = 126/149 (84.56%), Postives = 142/149 (95.30%), Query Frame = 0
BLAST of Carg24516 vs. Swiss-Prot
Match: sp|O23620|AHL23_ARATH (AT-hook motif nuclear-localized protein 23 OS=Arabidopsis thaliana OX=3702 GN=AHL23 PE=1 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 3.2e-65 Identity = 123/142 (86.62%), Postives = 135/142 (95.07%), Query Frame = 0
BLAST of Carg24516 vs. Swiss-Prot
Match: sp|O49662|AHL24_ARATH (AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AHL24 PE=2 SV=1) HSP 1 Score: 232.3 bits (591), Expect = 5.4e-60 Identity = 110/155 (70.97%), Postives = 135/155 (87.10%), Query Frame = 0
BLAST of Carg24516 vs. Swiss-Prot
Match: sp|Q9SZ70|AHL26_ARATH (AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AHL26 PE=2 SV=1) HSP 1 Score: 229.6 bits (584), Expect = 3.5e-59 Identity = 108/153 (70.59%), Postives = 134/153 (87.58%), Query Frame = 0
BLAST of Carg24516 vs. Swiss-Prot
Match: sp|O22130|AHL22_ARATH (AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AHL22 PE=1 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 1.9e-57 Identity = 107/153 (69.93%), Postives = 128/153 (83.66%), Query Frame = 0
BLAST of Carg24516 vs. TrEMBL
Match: tr|A0A2I0ISB9|A0A2I0ISB9_PUNGR (AT-hook motif nuclear-localized protein OS=Punica granatum OX=22663 GN=CRG98_032700 PE=4 SV=1) HSP 1 Score: 277.3 bits (708), Expect = 2.9e-71 Identity = 135/154 (87.66%), Postives = 147/154 (95.45%), Query Frame = 0
BLAST of Carg24516 vs. TrEMBL
Match: tr|A0A0D2P3B8|A0A0D2P3B8_GOSRA (AT-hook motif nuclear-localized protein OS=Gossypium raimondii OX=29730 GN=B456_003G181200 PE=4 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 5.0e-71 Identity = 137/154 (88.96%), Postives = 146/154 (94.81%), Query Frame = 0
BLAST of Carg24516 vs. TrEMBL
Match: tr|A0A1S3CQ43|A0A1S3CQ43_CUCME (AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103503535 PE=4 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 6.5e-71 Identity = 137/148 (92.57%), Postives = 143/148 (96.62%), Query Frame = 0
BLAST of Carg24516 vs. TrEMBL
Match: tr|A0A2P5QYE3|A0A2P5QYE3_GOSBA (AT-hook motif nuclear-localized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD23510 PE=4 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 6.5e-71 Identity = 137/156 (87.82%), Postives = 146/156 (93.59%), Query Frame = 0
BLAST of Carg24516 vs. TrEMBL
Match: tr|A0A2U1LUN0|A0A2U1LUN0_ARTAN (Uncharacterized protein OS=Artemisia annua OX=35608 GN=CTI12_AA416630 PE=4 SV=1) HSP 1 Score: 275.8 bits (704), Expect = 8.5e-71 Identity = 137/160 (85.62%), Postives = 149/160 (93.12%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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