Carg24513 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATACCAAAAGTGAACGTTGTTGTTCCAAGATCAAGAACCACTCCTCCTCCTCCGGTGCCCGGACGTTGCAAACAAGACGAAACACGAGTCGAAAAGATGAACCGAGAGCTGAAAGGGCTCTCGGGCTGCCACCGCGGCCGATGAAAAGCCTCTCCTCCACTGCCTTGGACGGGCGGCCGAGAAAGCGAGCTCTCCTCTGTGGGGTGAGTTACAAGAACTGGAAACATAGGCTACTTGGGACATTGAATGATGTTCGGAATATGCAAGATTTGTTGATCGATCATTTTGGATATTCCAAACATAACATTCGTATTCTCACAGGTTATATCATCTCTGCCTTCTAAATTTATGATCATTTATTTATGTGACAATTTTTGCTGCTATTTTTTGTTTTTTTTGGAGTTTTTAAGGAATAATTTTTAAAAAAATTATGTGGGTTGGTACGAAAGTGACTTAGGTTCGAGTGATAATGATCCAATTGAATTATCATAAGAACTTATAGATTAAGGGTGTTCGTGGACTTGGGTTGGGTTAGATTTAGACATCTTTTACACATATCCTAATTGTTCGGGTTATAAATTTTTTCAAACTAAACCGTCTTTATTAAATAATGAAACTAACCCACGTTGAGTTGGGTTGGTTCGATTTGTTCGAGTAATTTATTCAAAGTTTTGTTTTTTTTTTTTTCTTTAAACATTCGTAAAATGTTTATTTATTTATTTTTAAATATATATTTTGAGAAATTACCTTATTTAAAAGTTATTTTTAAGAGTTTTTGAAGAATAAATAATAAAAAAAATAATTGTGAAATTAAATAAAGTAATAAATAAAAATGTATATTTTAAAATTAATAATCAATTAGAATATTTTTTTTTAGACAATTTGACAAGAACGCCTTCTTTTGAAGCATCTTTAAAGCTTTTAACGTTACCTTTTGACCAAGTAAAAATGTAGATAATGAACATCTAAACCCGAACATTTCTAACGCTACAAGAATATGATACTTATATTTACGGTTTGTCATTTCAATATTTTTTAAGTTCAAATAAATCTAATGACTCAAGTCTGATCAACTTGACTTATATGATTTGAGCTATGTTAATTTCAAATAAATGAAGATTTTATGAATTGGATTAATTCATGGGTTTGTCTAATGCTCGAGGATGTTGAATTCTGAAATGGGTGAACATCAGGCGGTGTGTCAGCGAGAGACGTTGGACCCTAAAGGGAGTAAATTGTGAGATCCCACATTGGTTGGAGAAGAAGAGTGTCAACGAGGACGCTGGGCCTCGAAGGGATGGATTGTGAGATCCCACATCGATTGGAGAGGGAAACGAGTGTTAGTGAAGACGCTGGACCCCGAAAGGGGTGGATTGTGAGACCCCCGCAGGGAAACAAGTGTCATCGAGGATGCTGGGCCCTGAAGGAGATGGATTGTGAGATCCTACGTTAGTTAGAGAGAAGAATGAGTATCAGCGAAGACGCTGGCTCCAAAGGGGGTGGATTGTAAGATCCACGTCGGTTGGAGAGTAGAATGACTGTCGACTAGGACGTTGGCCCAAATAAGGTGGATTGTGAGATCCAAATCGGTTGGAGAGAAGATCGAAATATTCTTATCATTGTTTATAAGGGTGTAATTTTAAAAACCAAATAGAATAAATATTAATCAAATGTTTGAAAATAAAATAAATATATATGGTATGGCACAACAAATTGAATAGGTGACTAGAACAACTCGAACCACCTAATCTAAAATATTTATGGTTTGAACCGGAGCAGAGTACGAAACAAACCCGGAACGAGTACCAACAAAGAAGAACATCCAAAGCGGACTAAAATGGCTAGTTGAAGGTTGCAGGGGAGGCGAAAGCCTGGTGTTCTACTTCTCCGGCCATGGATTACGGCAGCCGGATTTCGCGATGGACGAGCTCGACGGCTACGACGAGACGATATGCCCAGTGGACTTCATGGAGGAAGGGATGATAAGCGACAACGAGATCAACGCCACCATTGTTTCCCCTCTGAAGGCCGGCGTGAACCTCCACAGCATCGTCGACGCCTGCCACAGCGCCACAATGCTCGATCTCGCCTACGTTTATGACCGCAACAGGTTCGGTTATTTCATTTGATTTTGAATTTGGGTTACGATTTTGATATTGGAATATGGGGTTTTAGGGATGAGTGGGTGGACAACAGGCCGCCGTCGGGAGCGTGGAAGGCGACGAGTGGTGGATTGGCGATTTGTTTGAGTGCTTGTGGAGATGATGAATTTGCTGCTGATACTTCTGTAAGCATCCACATAATATTCTCTATTATCTTCCTTTTTTTAGTACGACCAATCCAACTTAACCCATACCGTTCCCGTTGGGATGGTTTCGGATGAATGAAAACTAGATTGGTTGAACAGTGCAAACGTGTCAACGGGGATTTATTTTTAATTTTAAAAGTTACATTTTTGTGAAATTCCACGTCGGTTGGGGAAGAGAACTAAACATTTTTTTGTATGGGTGTGAAACTCTCTCCCTAGTAGATGTTTTAAAAACGTTTGAGGGAAAACTTAAAGATGACAATATCTGCTAGCGGTGGGCTTGAGTTGTTACAAATGGTATCAAAGTATGACACCGAGCGATGTGTCAACGAAGAGGCTGAGCCCCTAAGGAGGTGAACACGAGGCGGTGTGCCAGTATGGATGCTGGGTCCCGAAGAGGGGTGGATTAGGGAGTCTCACATCTATTAGAGAAGGGAACGAGTGTCGTGAGGATAGGTGGTGTGCCAGTATGGATGTTGGGTCCCGAAGAGGGGTGGATTGGGGGGTCCCACATCCATTGGAGAAAGGAACGAGTGTCAGTGATGATGTTGGACCCTGAATCGATATTTTAGAAGTTGAGAGATCAAAATAGAACAAACTGAGAACTTTATAGACCAAAATGAGAAGAACTTAAGAACGATAAAAAAAAAAAACTAATTTGCTCGAGAAAGTTTAGGGTTGTTGACGATTGTTGGAAATTATATGCAGATATTATCAGGGAAGACGATGAACGGAGCACTGACATTCATTCTTATCGATTTGGTTAAGAGATTTGGAGAAATGACGTATGGACGCCTGCTTGATTGCATGCAAGAAGCTGTTCGAAGGGCCAACAAAAAAGGATGCCTCCCATGTGTTTTTTTCCGAAAATTGTTCGAATACAAACAAATTCAGGTCATTTACTCATTACCCTTTCATTTTTTTTCTTCTTTTTTAACGTTTTTTTTTTTCCTCTCAATTTTAACCTTAAATTTGAATAAATGTTCGATTGCTCGTAAAAAAACCAATGAATTATACACAATTCAACTATTAGGACACTCGAAATTGACTTCTTGAACTTGATATGAATATTCAACCTTAAACAACAAGACTTTGGTTAAAGTGTCGAGTTTTTTTTTATTTCTTTCTCGTTTTCCCCTTGATGACCTCCTTCCTCACACATGTCACGAATGTGAATTTACTCGCATATCCTTACGGCATTGTTATGAGAAAAGGCTCTTAGAGTGGAAATGTTATTCAATGAGGTCGTCATTGTACGACCGTTTTATAATAACTATCAGATGTGAACCACTCTATATATTTTTTACTCTATATATTTTTCCATATTTCTCTCGTACATTCAACCTTACAAAATTAACGAATTGGACTAGTGGTTGTTGTAGATTTGACGTCCTAGAAGGAACGGGGCGGCTAAAATATCGAATGGTGTCGGTGTATCTATATTATTAGTATGTAATAGCAATCGAGAGTATCTACCATCGAGAAGGTCTTCTCATTTTTTCATGCTAATTTCTACGTTTTTTCGTTTTAATTTGATATTTTGCAGGAACCTCGACTCTCATCATCAGAGATCTTTGACGTGCACAAGAAAATATTTACATTATAACTTTAGATTTTTCCTACTAAAAAATAATTTGAAATTGTTTAGAGAGGAAACTCTAACCATCTAATTATTGTTTCGTAATGTAAT ATGGATACCAAAAGTGAACGTTGTTGTTCCAAGATCAAGAACCACTCCTCCTCCTCCGGTGCCCGGACGTTGCAAACAAGACGAAACACGAGTCGAAAAGATGAACCGAGAGCTGAAAGGGCTCTCGGGCTGCCACCGCGGCCGATGAAAAGCCTCTCCTCCACTGCCTTGGACGGGCGGCCGAGAAAGCGAGCTCTCCTCTGTGGGGTGAGTTACAAGAACTGGAAACATAGGCTACTTGGGACATTGAATGATGTTCGGAATATGCAAGATTTGTTGATCGATCATTTTGGATATTCCAAACATAACATTCGTATTCTCACAGAGTACGAAACAAACCCGGAACGAGTACCAACAAAGAAGAACATCCAAAGCGGACTAAAATGGCTAGTTGAAGGTTGCAGGGGAGGCGAAAGCCTGGTGTTCTACTTCTCCGGCCATGGATTACGGCAGCCGGATTTCGCGATGGACGAGCTCGACGGCTACGACGAGACGATATGCCCAGTGGACTTCATGGAGGAAGGGATGATAAGCGACAACGAGATCAACGCCACCATTGTTTCCCCTCTGAAGGCCGGCGTGAACCTCCACAGCATCGTCGACGCCTGCCACAGCGCCACAATGCTCGATCTCGCCTACGTTTATGACCGCAACAGGGATGAGTGGGTGGACAACAGGCCGCCGTCGGGAGCGTGGAAGGCGACGAGTGGTGGATTGGCGATTTGTTTGAGTGCTTGTGGAGATGATGAATTTGCTGCTGATACTTCTATATTATCAGGGAAGACGATGAACGGAGCACTGACATTCATTCTTATCGATTTGGTTAAGAGATTTGGAGAAATGACGTATGGACGCCTGCTTGATTGCATGCAAGAAGCTGTTCGAAGGGCCAACAAAAAAGGATGCCTCCCATGTGTTTTTTTCCGAAAATTGTTCGAATACAAACAAATTCAGGAACCTCGACTCTCATCATCAGAGATCTTTGACGTGCACAAGAAAATATTTACATTATAACTTTAGATTTTTCCTACTAAAAAATAATTTGAAATTGTTTAGAGAGGAAACTCTAACCATCTAATTATTGTTTCGTAATGTAAT ATGGATACCAAAAGTGAACGTTGTTGTTCCAAGATCAAGAACCACTCCTCCTCCTCCGGTGCCCGGACGTTGCAAACAAGACGAAACACGAGTCGAAAAGATGAACCGAGAGCTGAAAGGGCTCTCGGGCTGCCACCGCGGCCGATGAAAAGCCTCTCCTCCACTGCCTTGGACGGGCGGCCGAGAAAGCGAGCTCTCCTCTGTGGGGTGAGTTACAAGAACTGGAAACATAGGCTACTTGGGACATTGAATGATGTTCGGAATATGCAAGATTTGTTGATCGATCATTTTGGATATTCCAAACATAACATTCGTATTCTCACAGAGTACGAAACAAACCCGGAACGAGTACCAACAAAGAAGAACATCCAAAGCGGACTAAAATGGCTAGTTGAAGGTTGCAGGGGAGGCGAAAGCCTGGTGTTCTACTTCTCCGGCCATGGATTACGGCAGCCGGATTTCGCGATGGACGAGCTCGACGGCTACGACGAGACGATATGCCCAGTGGACTTCATGGAGGAAGGGATGATAAGCGACAACGAGATCAACGCCACCATTGTTTCCCCTCTGAAGGCCGGCGTGAACCTCCACAGCATCGTCGACGCCTGCCACAGCGCCACAATGCTCGATCTCGCCTACGTTTATGACCGCAACAGGGATGAGTGGGTGGACAACAGGCCGCCGTCGGGAGCGTGGAAGGCGACGAGTGGTGGATTGGCGATTTGTTTGAGTGCTTGTGGAGATGATGAATTTGCTGCTGATACTTCTATATTATCAGGGAAGACGATGAACGGAGCACTGACATTCATTCTTATCGATTTGGTTAAGAGATTTGGAGAAATGACGTATGGACGCCTGCTTGATTGCATGCAAGAAGCTGTTCGAAGGGCCAACAAAAAAGGATGCCTCCCATGTGTTTTTTTCCGAAAATTGTTCGAATACAAACAAATTCAGGAACCTCGACTCTCATCATCAGAGATCTTTGACGTGCACAAGAAAATATTTACATTATAA MDTKSERCCSKIKNHSSSSGARTLQTRRNTSRKDEPRAERALGLPPRPMKSLSSTALDGRPRKRALLCGVSYKNWKHRLLGTLNDVRNMQDLLIDHFGYSKHNIRILTEYETNPERVPTKKNIQSGLKWLVEGCRGGESLVFYFSGHGLRQPDFAMDELDGYDETICPVDFMEEGMISDNEINATIVSPLKAGVNLHSIVDACHSATMLDLAYVYDRNRDEWVDNRPPSGAWKATSGGLAICLSACGDDEFAADTSILSGKTMNGALTFILIDLVKRFGEMTYGRLLDCMQEAVRRANKKGCLPCVFFRKLFEYKQIQEPRLSSSEIFDVHKKIFTL
BLAST of Carg24513 vs. NCBI nr
Match: XP_022963809.1 (metacaspase-1-like [Cucurbita moschata]) HSP 1 Score: 671.4 bits (1731), Expect = 1.6e-189 Identity = 328/337 (97.33%), Postives = 332/337 (98.52%), Query Frame = 0
BLAST of Carg24513 vs. NCBI nr
Match: XP_023553943.1 (metacaspase-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 667.2 bits (1720), Expect = 3.0e-188 Identity = 325/337 (96.44%), Postives = 331/337 (98.22%), Query Frame = 0
BLAST of Carg24513 vs. NCBI nr
Match: XP_022967173.1 (metacaspase-1-like [Cucurbita maxima]) HSP 1 Score: 661.8 bits (1706), Expect = 1.3e-186 Identity = 322/337 (95.55%), Postives = 331/337 (98.22%), Query Frame = 0
BLAST of Carg24513 vs. NCBI nr
Match: XP_023530043.1 (metacaspase-1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 527.7 bits (1358), Expect = 2.9e-146 Identity = 268/355 (75.49%), Postives = 290/355 (81.69%), Query Frame = 0
BLAST of Carg24513 vs. NCBI nr
Match: XP_022988833.1 (metacaspase-1-like [Cucurbita maxima]) HSP 1 Score: 520.0 bits (1338), Expect = 6.0e-144 Identity = 259/352 (73.58%), Postives = 287/352 (81.53%), Query Frame = 0
BLAST of Carg24513 vs. TAIR10
Match: AT1G02170.1 (metacaspase 1) HSP 1 Score: 261.2 bits (666), Expect = 9.1e-70 Identity = 136/289 (47.06%), Postives = 182/289 (62.98%), Query Frame = 0
BLAST of Carg24513 vs. TAIR10
Match: AT4G25110.1 (metacaspase 2) HSP 1 Score: 236.9 bits (603), Expect = 1.8e-62 Identity = 132/304 (43.42%), Postives = 177/304 (58.22%), Query Frame = 0
BLAST of Carg24513 vs. TAIR10
Match: AT5G64240.2 (metacaspase 3) HSP 1 Score: 233.4 bits (594), Expect = 2.0e-61 Identity = 124/280 (44.29%), Postives = 173/280 (61.79%), Query Frame = 0
BLAST of Carg24513 vs. TAIR10
Match: AT1G79320.1 (metacaspase 6) HSP 1 Score: 95.9 bits (237), Expect = 5.1e-20 Identity = 55/151 (36.42%), Postives = 89/151 (58.94%), Query Frame = 0
BLAST of Carg24513 vs. TAIR10
Match: AT1G16420.1 (metacaspase 8) HSP 1 Score: 88.2 bits (217), Expect = 1.1e-17 Identity = 55/149 (36.91%), Postives = 82/149 (55.03%), Query Frame = 0
BLAST of Carg24513 vs. Swiss-Prot
Match: sp|Q7XJE6|MCA1_ARATH (Metacaspase-1 OS=Arabidopsis thaliana OX=3702 GN=AMC1 PE=1 SV=1) HSP 1 Score: 261.2 bits (666), Expect = 1.6e-68 Identity = 136/289 (47.06%), Postives = 182/289 (62.98%), Query Frame = 0
BLAST of Carg24513 vs. Swiss-Prot
Match: sp|Q7XJE5|MCA2_ARATH (Metacaspase-2 OS=Arabidopsis thaliana OX=3702 GN=AMC2 PE=1 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 3.3e-61 Identity = 132/304 (43.42%), Postives = 177/304 (58.22%), Query Frame = 0
BLAST of Carg24513 vs. Swiss-Prot
Match: sp|Q9FMG1|MCA3_ARATH (Metacaspase-3 OS=Arabidopsis thaliana OX=3702 GN=AMC3 PE=2 SV=1) HSP 1 Score: 233.4 bits (594), Expect = 3.7e-60 Identity = 124/280 (44.29%), Postives = 173/280 (61.79%), Query Frame = 0
BLAST of Carg24513 vs. Swiss-Prot
Match: sp|Q7S4N5|MCA1B_NEUCR (Metacaspase-1B OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=casB PE=3 SV=2) HSP 1 Score: 163.3 bits (412), Expect = 4.7e-39 Identity = 98/285 (34.39%), Postives = 151/285 (52.98%), Query Frame = 0
BLAST of Carg24513 vs. Swiss-Prot
Match: sp|A5D9W7|MCA1_PICGU (Metacaspase-1 OS=Meyerozyma guilliermondii (strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 / NRRL Y-324) OX=294746 GN=MCA1 PE=3 SV=2) HSP 1 Score: 157.5 bits (397), Expect = 2.6e-37 Identity = 104/311 (33.44%), Postives = 155/311 (49.84%), Query Frame = 0
BLAST of Carg24513 vs. TrEMBL
Match: tr|A0A0A0K220|A0A0A0K220_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G062910 PE=4 SV=1) HSP 1 Score: 489.2 bits (1258), Expect = 7.5e-135 Identity = 254/364 (69.78%), Postives = 288/364 (79.12%), Query Frame = 0
BLAST of Carg24513 vs. TrEMBL
Match: tr|A0A1S3BZX6|A0A1S3BZX6_CUCME (metacaspase-1 OS=Cucumis melo OX=3656 GN=LOC103495419 PE=4 SV=1) HSP 1 Score: 485.7 bits (1249), Expect = 8.3e-134 Identity = 232/286 (81.12%), Postives = 258/286 (90.21%), Query Frame = 0
BLAST of Carg24513 vs. TrEMBL
Match: tr|A0A067KXH3|A0A067KXH3_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_24905 PE=4 SV=1) HSP 1 Score: 367.9 bits (943), Expect = 2.5e-98 Identity = 177/312 (56.73%), Postives = 226/312 (72.44%), Query Frame = 0
BLAST of Carg24513 vs. TrEMBL
Match: tr|A0A2I4EMA9|A0A2I4EMA9_9ROSI (metacaspase-1-like isoform X5 OS=Juglans regia OX=51240 GN=LOC108990877 PE=4 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 1.7e-94 Identity = 172/275 (62.55%), Postives = 210/275 (76.36%), Query Frame = 0
BLAST of Carg24513 vs. TrEMBL
Match: tr|A0A2C9VI42|A0A2C9VI42_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_07G032300 PE=4 SV=1) HSP 1 Score: 354.4 bits (908), Expect = 2.9e-94 Identity = 176/311 (56.59%), Postives = 220/311 (70.74%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |