Carg24479 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCTTGCTGGAAAGTTAGTGAGTGAAGTAAGAGTAAACATAGCAGCTGAGAAATACTACAAAATCTGGAAACACGAAGTTTCTCAGGTTCCCAAGATTTGTCCAAAATACATCCAAAAAGTTGAAGTTCATGAAGGGGATTGGGACAGCCATGGCCATGGCTCAGTCAAGATCTGGCATTACTCTATCGGTATGTATAAGTATTACCATTTTTGTTTCTGTTTTCATTTGCTTTCATGAATGCCCCCTAGCTCCTAAGTAATTGACCTCTTTTTGTTTATGTGATATTATCATTTTTGTTTTTGTTTTCATTTGCTTTCATGAATGCATCCTAGCTCCTAAGTAATTGACCTCTTTCTGTTTATGTGATTTGTTAAGATGGTAAGGCTGGGTTTTTCAAAGAACGAGTGGAATTCGATGATAAGAATATGGCAATGATTTTGATTGGATTGGATGGAGATATGTTCGAGCATTACAAATCCTTCAAAGCAACGTATAAAGTTGTGCCAAAAGGACCAAACCATTGTCTGGCAGTTATGATACTGAAATATGAGAAACTACGTGCTGACTGTCCTTCTCCTTACAAGTATATTGATCTCATGAATGGCCTCACCAAGAGCATTGAATCTTACCTTCAGTAATAATGCTATCTATACGCATAGATTTGAGCTTTGTTTCCCCTCTTTCACTGTAAGCTTATGGGTTATGTAATACTAATTATAATAATAATAAATAAATAATGGTCACTCTCATGTAAAGAGGGATGAACTTTGAGTACTATGTTTGCTTAAATATATAATATGT ATGGCTCTTGCTGGAAAGTTAGTGAGTGAAGTAAGAGTAAACATAGCAGCTGAGAAATACTACAAAATCTGGAAACACGAAGTTTCTCAGGTTCCCAAGATTTGTCCAAAATACATCCAAAAAGTTGAAGTTCATGAAGGGGATTGGGACAGCCATGGCCATGGCTCAGTCAAGATCTGGCATTACTCTATCGATGGTAAGGCTGGGTTTTTCAAAGAACGAGTGGAATTCGATGATAAGAATATGGCAATGATTTTGATTGGATTGGATGGAGATATGTTCGAGCATTACAAATCCTTCAAAGCAACGTATAAAGTTGTGCCAAAAGGACCAAACCATTGTCTGGCAGTTATGATACTGAAATATGAGAAACTACGTGCTGACTGTCCTTCTCCTTACAAGTATATTGATCTCATGAATGGCCTCACCAAGAGCATTGAATCTTACCTTCAGTAATAATGCTATCTATACGCATAGATTTGAGCTTTGTTTCCCCTCTTTCACTGTAAGCTTATGGGTTATGTAATACTAATTATAATAATAATAAATAAATAATGGTCACTCTCATGTAAAGAGGGATGAACTTTGAGTACTATGTTTGCTTAAATATATAATATGT ATGGCTCTTGCTGGAAAGTTAGTGAGTGAAGTAAGAGTAAACATAGCAGCTGAGAAATACTACAAAATCTGGAAACACGAAGTTTCTCAGGTTCCCAAGATTTGTCCAAAATACATCCAAAAAGTTGAAGTTCATGAAGGGGATTGGGACAGCCATGGCCATGGCTCAGTCAAGATCTGGCATTACTCTATCGATGGTAAGGCTGGGTTTTTCAAAGAACGAGTGGAATTCGATGATAAGAATATGGCAATGATTTTGATTGGATTGGATGGAGATATGTTCGAGCATTACAAATCCTTCAAAGCAACGTATAAAGTTGTGCCAAAAGGACCAAACCATTGTCTGGCAGTTATGATACTGAAATATGAGAAACTACGTGCTGACTGTCCTTCTCCTTACAAGTATATTGATCTCATGAATGGCCTCACCAAGAGCATTGAATCTTACCTTCAGTAA MALAGKLVSEVRVNIAAEKYYKIWKHEVSQVPKICPKYIQKVEVHEGDWDSHGHGSVKIWHYSIDGKAGFFKERVEFDDKNMAMILIGLDGDMFEHYKSFKATYKVVPKGPNHCLAVMILKYEKLRADCPSPYKYIDLMNGLTKSIESYLQ
BLAST of Carg24479 vs. NCBI nr
Match: XP_022941873.1 (MLP-like protein 328 [Cucurbita moschata]) HSP 1 Score: 320.9 bits (821), Expect = 2.4e-84 Identity = 151/151 (100.00%), Postives = 151/151 (100.00%), Query Frame = 0
BLAST of Carg24479 vs. NCBI nr
Match: XP_022996668.1 (MLP-like protein 328 [Cucurbita maxima]) HSP 1 Score: 311.2 bits (796), Expect = 1.9e-81 Identity = 144/151 (95.36%), Postives = 149/151 (98.68%), Query Frame = 0
BLAST of Carg24479 vs. NCBI nr
Match: XP_023532339.1 (MLP-like protein 328 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 310.8 bits (795), Expect = 2.5e-81 Identity = 142/151 (94.04%), Postives = 148/151 (98.01%), Query Frame = 0
BLAST of Carg24479 vs. NCBI nr
Match: XP_022150050.1 (MLP-like protein 328 [Momordica charantia]) HSP 1 Score: 223.8 bits (569), Expect = 4.0e-55 Identity = 100/151 (66.23%), Postives = 124/151 (82.12%), Query Frame = 0
BLAST of Carg24479 vs. NCBI nr
Match: XP_008450254.1 (PREDICTED: MLP-like protein 328 [Cucumis melo]) HSP 1 Score: 223.4 bits (568), Expect = 5.2e-55 Identity = 101/151 (66.89%), Postives = 122/151 (80.79%), Query Frame = 0
BLAST of Carg24479 vs. TAIR10
Match: AT4G14060.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 123.2 bits (308), Expect = 1.3e-28 Identity = 57/150 (38.00%), Postives = 92/150 (61.33%), Query Frame = 0
BLAST of Carg24479 vs. TAIR10
Match: AT1G14930.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 121.7 bits (304), Expect = 3.9e-28 Identity = 54/150 (36.00%), Postives = 89/150 (59.33%), Query Frame = 0
BLAST of Carg24479 vs. TAIR10
Match: AT1G14960.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 121.3 bits (303), Expect = 5.0e-28 Identity = 56/150 (37.33%), Postives = 92/150 (61.33%), Query Frame = 0
BLAST of Carg24479 vs. TAIR10
Match: AT1G14950.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 120.9 bits (302), Expect = 6.6e-28 Identity = 58/150 (38.67%), Postives = 86/150 (57.33%), Query Frame = 0
BLAST of Carg24479 vs. TAIR10
Match: AT2G01520.1 (MLP-like protein 328) HSP 1 Score: 118.6 bits (296), Expect = 3.3e-27 Identity = 55/150 (36.67%), Postives = 88/150 (58.67%), Query Frame = 0
BLAST of Carg24479 vs. Swiss-Prot
Match: sp|Q9ZVF3|ML328_ARATH (MLP-like protein 328 OS=Arabidopsis thaliana OX=3702 GN=MLP328 PE=2 SV=1) HSP 1 Score: 118.6 bits (296), Expect = 5.9e-26 Identity = 55/150 (36.67%), Postives = 88/150 (58.67%), Query Frame = 0
BLAST of Carg24479 vs. Swiss-Prot
Match: sp|Q9ZVF2|ML329_ARATH (MLP-like protein 329 OS=Arabidopsis thaliana OX=3702 GN=MLP329 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 9.4e-24 Identity = 53/150 (35.33%), Postives = 85/150 (56.67%), Query Frame = 0
BLAST of Carg24479 vs. Swiss-Prot
Match: sp|Q06394|ML146_PAPSO (Major latex protein 146 OS=Papaver somniferum OX=3469 GN=MLP146 PE=2 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 3.1e-19 Identity = 54/151 (35.76%), Postives = 79/151 (52.32%), Query Frame = 0
BLAST of Carg24479 vs. Swiss-Prot
Match: sp|Q06395|ML149_PAPSO (Major latex protein 149 OS=Papaver somniferum OX=3469 GN=MLP149 PE=2 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 1.2e-18 Identity = 56/151 (37.09%), Postives = 76/151 (50.33%), Query Frame = 0
BLAST of Carg24479 vs. Swiss-Prot
Match: sp|Q41020|MLP22_PAPSO (Major latex protein 22 OS=Papaver somniferum OX=3469 GN=MLP22 PE=2 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 3.8e-17 Identity = 53/149 (35.57%), Postives = 82/149 (55.03%), Query Frame = 0
BLAST of Carg24479 vs. TrEMBL
Match: tr|A0A1S3BPT7|A0A1S3BPT7_CUCME (MLP-like protein 328 OS=Cucumis melo OX=3656 GN=LOC103491915 PE=4 SV=1) HSP 1 Score: 223.4 bits (568), Expect = 3.4e-55 Identity = 101/151 (66.89%), Postives = 122/151 (80.79%), Query Frame = 0
BLAST of Carg24479 vs. TrEMBL
Match: tr|A0A0A0KIU4|A0A0A0KIU4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G037656 PE=4 SV=1) HSP 1 Score: 221.1 bits (562), Expect = 1.7e-54 Identity = 100/151 (66.23%), Postives = 120/151 (79.47%), Query Frame = 0
BLAST of Carg24479 vs. TrEMBL
Match: tr|A0A1S3BPT2|A0A1S3BPT2_CUCME (MLP-like protein 328 OS=Cucumis melo OX=3656 GN=LOC103491908 PE=4 SV=1) HSP 1 Score: 219.2 bits (557), Expect = 6.5e-54 Identity = 95/151 (62.91%), Postives = 125/151 (82.78%), Query Frame = 0
BLAST of Carg24479 vs. TrEMBL
Match: tr|A0A0A0KJB8|A0A0A0KJB8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G044510 PE=4 SV=1) HSP 1 Score: 216.9 bits (551), Expect = 3.2e-53 Identity = 93/151 (61.59%), Postives = 125/151 (82.78%), Query Frame = 0
BLAST of Carg24479 vs. TrEMBL
Match: tr|A0A0A0KMM1|A0A0A0KMM1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G047770 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 1.4e-51 Identity = 90/150 (60.00%), Postives = 120/150 (80.00%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|