Carg24473 (gene) Silver-seed gourd

Overview
NameCarg24473
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionU-box domain-containing protein 62-like
LocationCucurbita_argyrosperma_scaffold_303 : 75603 .. 78713 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCCTCCCAACACATCAATGCCCTCAACTCCCACCTCCTCTTCCAACACGAAGCTATCCCCTTCAATTCCTCCACCACATCGCAGCGCCGCGTCACCGACCCAGCTCCCAAAACCCGCGAGCTCTGCGGTTTCATGGACGACAAGCTCTTCCCTGCAGAACGAGATCGATTCTTTGCCCATCAGGGTGGCGATTTTCGCCAGAGTTTGTTTTGTGATGGCCGGAATTGGAATGGGAATGGGAGTGGGAGGACTGGAAGCGGGAAAGGATCGGATGAAGAAGATGAGGATGATGACGACGACGACGACGAAGATGAAGTCGATGATGACGATGGCGATGTTGAAGGACTTGTTTCTTTGGATGATGTTAATAAGTCCAGAAAAACTGGTAACCCCAATAGCAGCAACAATGAGAGAAGCGATCAGAGTGGTGGGGGCTTGAAGAATGGGACGAACAAATTGGGCAATGGGAAGCCTAAGCAACATTCTTCTTTTGGTAAGGGATTTGTACTTTCAACTTTCATTTCCCGAATAGAAAATGATTCTAGAATGCTCCCATTTGGGAAGTTTTATTGATTTTTCTCATGGGTTTTAGGTGGAACTTTGTTGGTCAAGGATGGGATGGCTGCCCCTTCAGGGAGTAACACAGGAGAAGTTCAGAGTGAGAATCACCAACAGGGAAGGTTGGGGAATTACCCAAATGCGGTTACAATTGCAGAACATGACAGTGAAACGTATTATTCCCAATATTTGCAAGGCACTGAGGGGTCTGCTTCTGGACACAAGGATTTGGCTATGGAAAATGGACGTGGGTTTGGGAGAAGGGATGTTTTTCTTTTGGGTGAGCCTGGAGAGTCTCTCAGAGCAATTCTCACAGACCCTGTGACGTGAGTTCTTAGTGTTTCCATTATGTTTCATTACTTGTTCTTACTTGTTCTTGCATCAAAATGTGTAGTTTCTAACTTTTTTTTTCTCATCTCAATTGTTTCTGGTAATATATTTACTTTGGTTTATTGTTCTTCATGGAATCAGGGGCTCTCTAATGGATGATGCAATGATATTACCATGTGGGCATTCCTTCGGTCGTGGTGGAATAGAACATGTTCTTAGACTAGTGAGTTACTGCCAAGATTACTGCTCATATTTACTGAAATTCCTTTTTATTATGTTATCTACCATTCTTTTCAACATATTCAAATGTAGGAGGCACGTTGAAACTGTTTGGCGTCTAGTATACTTACGTTTTGTATCGATTGCGAGCATATTAACGTCAAAACATTGTAAAGTTGGCTTTGGATTTGAAGTTTTACTCGTCCGTCGTTTTGATCCATGCTGATTTATTTTCAGAATTTCAATCTAATATAGTACTTGAAATATGTCGGTCGACGCCGTGGTTGAGTTTCTTCTGTGCAAAAACTATTTCAAATATGTGCTCTGTGCTATAAAACTGAGTCTACTACCTTGTATGCAGCAGCAACGCTCGAACTCTCAAGTCCCGTTTGATTTTTGGTTTTTGGCTTTGAATATTGTGCTTGTTTTTTTTTTCCCTCATTTCTCTCCAATGAGTTTCATCTTTCTTATATGAACATTTGAATTCATAGTCAAATTCCATAAACAAAAATAAGTTTTTGAAAATTACGATTTATGAATGTTCTCTCTGTTGCAAGCGTGTGTGTTACCTGACTTATGCACCTCGATATGCATTGCTATTTGGCTGCTCTGTTGATATGAATCAGTTAAGTACCTTGATGACCTCGGTTTCATAGCGTTTTTGCATTTCTCGTGATGTCTTCCCAGAAATCTTGTTACACGTGTTCTCAGTTGGTTTCTGAAGACTTAATTGCCCAAAACTTATGTGAGTTTTTCTGCACTTATAACTTTTAACATCTCTTTACTGCTATTCCCAAAAATGCTCGATGTTTTTCGAGGTTTAATTGCTCGTGTTTTGTTGTAAGTGCTCCTAGAAGTCAGGAGTGTAGGTTGCAAGAATTTCCATTGTTCTAATCTCACATTGTTAGATCCCAAAGTACATTTTGGATTAAAAATAAAAATATAGAGAAGGTTTTGTATCCCCCAGAACGACGAAGTAATGTATAGATCGATATAGTCTTTAAAGATTATTTACAAAATTATGTGAACGTTAAGTGATCGTCTTTTTCATATCGTGATATTTGTATCTTCAGCTCTTCAAGCTGCAGTCCGAGCATTCCGTCGGGAAGAAGAATTGTTATTTTACCGCTCACCGAAAAGGAGAAGGGAGAGGTTTGAGCAGGTATTTCCATTGTACCTCAGGACTGTAGTTTCTTAAGCCTGCTAATATGGGATACTAAAATCAAAGGGGGAGGCCGGGAATAGTGTAACGGCCTAAGCCCACCGCTAGCATATATTGTCCTCTTTAGGTATTCTCTCTCGGGTTTCCCCTCGAGGTTTTTAAAATGCGCATTTTAGGGAGAAGTTCCAAGTTCCACACCCTTATAAAGGGTGCTTCATTCTCCTCCTAACCGACAATTCTAGTCTTTTCTATCACTCAACCACTATATTCAGTTCACTTGTGGCAAGTTCTATGTAGGACAAGGTTGGCTATAGTGATTCGACTATGGGTACTCGAAGGGGTCGAGGCGTTCAGTTTCCTTTTGCAGTGACAGATCGGGTAATTATCAAGGTGCGCAACAAACCAAACTCTTATTTAGTTCCTATATTATAGCACGTCGAAACTAATATCGCAACTAAAAATGGATCAGGGGAACAAGAGGACACCGCTGCGTTTCGTGGGACGTGAAGCTGTTGTTACAACACAGTGTTTGAATGGATGGTCAGTCATCGTTTCAATCTTTTGTGGGTTTAAATCTGATCATAGTTTATCTTCTTGTTCAAGAACTTTGATATAATAAAACCTAACATCTGAAAGTTGAAGAGCGAAAAATAAGGACTTAAAAAGTCGAAAAGTTTAAGGAGGAAGACATGAATGTATCTACTCTTTGTTGCAGGTACGTGGTGAAAACACTAGACAATGCAGAGAGTGTAAAGTTGCAATACCGCTCGCTTGCAAAGGTTCCGAACGATGGAGCATCAAAAACGACAACAAGTAAGATAGCAACTAATTGGGTTTAG

mRNA sequence

ATGTCCTCCCAACACATCAATGCCCTCAACTCCCACCTCCTCTTCCAACACGAAGCTATCCCCTTCAATTCCTCCACCACATCGCAGCGCCGCGTCACCGACCCAGCTCCCAAAACCCGCGAGCTCTGCGGTTTCATGGACGACAAGCTCTTCCCTGCAGAACGAGATCGATTCTTTGCCCATCAGGGTGGCGATTTTCGCCAGAGTTTGTTTTGTGATGGCCGGAATTGGAATGGGAATGGGAGTGGGAGGACTGGAAGCGGGAAAGGATCGGATGAAGAAGATGAGGATGATGACGACGACGACGACGAAGATGAAGTCGATGATGACGATGGCGATGTTGAAGGACTTGTTTCTTTGGATGATGTTAATAAGTCCAGAAAAACTGGTAACCCCAATAGCAGCAACAATGAGAGAAGCGATCAGAGTGGTGGGGGCTTGAAGAATGGGACGAACAAATTGGGCAATGGGAAGCCTAAGCAACATTCTTCTTTTGGTGGAACTTTGTTGGTCAAGGATGGGATGGCTGCCCCTTCAGGGAGTAACACAGGAGAAGTTCAGAGTGAGAATCACCAACAGGGAAGGTTGGGGAATTACCCAAATGCGGTTACAATTGCAGAACATGACAGTGAAACGTATTATTCCCAATATTTGCAAGGCACTGAGGGGTCTGCTTCTGGACACAAGGATTTGGCTATGGAAAATGGACGTGGGTTTGGGAGAAGGGATGTTTTTCTTTTGGGTGAGCCTGGAGAGTCTCTCAGAGCAATTCTCACAGACCCTGTGACGGGCTCTCTAATGGATGATGCAATGATATTACCATGTGGGCATTCCTTCGGTCGTGGTGGAATAGAACATGTTCTTAGACTAGTGACTCTTCAAGCTGCAGTCCGAGCATTCCGTCGGGAAGAAGAATTGTTATTTTACCGCTCACCGAAAAGGAGAAGGGAGAGGTTTGAGCAGGACAAGGTTGGCTATAGTGATTCGACTATGGGTACTCGAAGGGGTCGAGGCGTTCAGTTTCCTTTTGCAGTGACAGATCGGGTAATTATCAAGGGGAACAAGAGGACACCGCTGCGTTTCGTGGGACGTGAAGCTGTTGTTACAACACAGTGTTTGAATGGATGGTACGTGGTGAAAACACTAGACAATGCAGAGAGTGTAAAGTTGCAATACCGCTCGCTTGCAAAGGTTCCGAACGATGGAGCATCAAAAACGACAACAAGTAAGATAGCAACTAATTGGGTTTAG

Coding sequence (CDS)

ATGTCCTCCCAACACATCAATGCCCTCAACTCCCACCTCCTCTTCCAACACGAAGCTATCCCCTTCAATTCCTCCACCACATCGCAGCGCCGCGTCACCGACCCAGCTCCCAAAACCCGCGAGCTCTGCGGTTTCATGGACGACAAGCTCTTCCCTGCAGAACGAGATCGATTCTTTGCCCATCAGGGTGGCGATTTTCGCCAGAGTTTGTTTTGTGATGGCCGGAATTGGAATGGGAATGGGAGTGGGAGGACTGGAAGCGGGAAAGGATCGGATGAAGAAGATGAGGATGATGACGACGACGACGACGAAGATGAAGTCGATGATGACGATGGCGATGTTGAAGGACTTGTTTCTTTGGATGATGTTAATAAGTCCAGAAAAACTGGTAACCCCAATAGCAGCAACAATGAGAGAAGCGATCAGAGTGGTGGGGGCTTGAAGAATGGGACGAACAAATTGGGCAATGGGAAGCCTAAGCAACATTCTTCTTTTGGTGGAACTTTGTTGGTCAAGGATGGGATGGCTGCCCCTTCAGGGAGTAACACAGGAGAAGTTCAGAGTGAGAATCACCAACAGGGAAGGTTGGGGAATTACCCAAATGCGGTTACAATTGCAGAACATGACAGTGAAACGTATTATTCCCAATATTTGCAAGGCACTGAGGGGTCTGCTTCTGGACACAAGGATTTGGCTATGGAAAATGGACGTGGGTTTGGGAGAAGGGATGTTTTTCTTTTGGGTGAGCCTGGAGAGTCTCTCAGAGCAATTCTCACAGACCCTGTGACGGGCTCTCTAATGGATGATGCAATGATATTACCATGTGGGCATTCCTTCGGTCGTGGTGGAATAGAACATGTTCTTAGACTAGTGACTCTTCAAGCTGCAGTCCGAGCATTCCGTCGGGAAGAAGAATTGTTATTTTACCGCTCACCGAAAAGGAGAAGGGAGAGGTTTGAGCAGGACAAGGTTGGCTATAGTGATTCGACTATGGGTACTCGAAGGGGTCGAGGCGTTCAGTTTCCTTTTGCAGTGACAGATCGGGTAATTATCAAGGGGAACAAGAGGACACCGCTGCGTTTCGTGGGACGTGAAGCTGTTGTTACAACACAGTGTTTGAATGGATGGTACGTGGTGAAAACACTAGACAATGCAGAGAGTGTAAAGTTGCAATACCGCTCGCTTGCAAAGGTTCCGAACGATGGAGCATCAAAAACGACAACAAGTAAGATAGCAACTAATTGGGTTTAG

Protein sequence

MSSQHINALNSHLLFQHEAIPFNSSTTSQRRVTDPAPKTRELCGFMDDKLFPAERDRFFAHQGGDFRQSLFCDGRNWNGNGSGRTGSGKGSDEEDEDDDDDDDEDEVDDDDGDVEGLVSLDDVNKSRKTGNPNSSNNERSDQSGGGLKNGTNKLGNGKPKQHSSFGGTLLVKDGMAAPSGSNTGEVQSENHQQGRLGNYPNAVTIAEHDSETYYSQYLQGTEGSASGHKDLAMENGRGFGRRDVFLLGEPGESLRAILTDPVTGSLMDDAMILPCGHSFGRGGIEHVLRLVTLQAAVRAFRREEELLFYRSPKRRRERFEQDKVGYSDSTMGTRRGRGVQFPFAVTDRVIIKGNKRTPLRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDGASKTTTSKIATNWV
Homology
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BLAST of Carg24473 vs. NCBI nr
Match: XP_023532305.1 (U-box domain-containing protein 62 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 713.4 bits (1840), Expect = 4.6e-202
Identity = 408/434 (94.01%), Postives = 410/434 (94.47%), Query Frame = 0 

Query: 1   MSSQHINALNSHLLFQHEAIPFNSSTTSQRRVTDPAPKTRELCGFMDDKLFPAERDRFFA 60
           MSSQHINALNSHLLFQHEAIPFNSSTTSQRRVTDPAPKTRELCGFMDDKLFPAERDRFFA
Sbjct: 1   MSSQHINALNSHLLFQHEAIPFNSSTTSQRRVTDPAPKTRELCGFMDDKLFPAERDRFFA 60

Query: 61  HQGGDFRQSLFCDGRNWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGLVSL 120
           HQGGDFRQSLFCDGRNWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGLVSL
Sbjct: 61  HQGGDFRQSLFCDGRNWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGLVSL 120

Query: 121 DDVNKSRKTGNPNSSNNERSDQSGGGLKNGTNKLGNGKPKQHSSFGGTLLVKDGMAAPSG 180
           DDVNKSRKTGNPNSSNNERSDQSGGGLKNGTNKLGNGKPKQHSSFGGTLLVKDGMA PSG
Sbjct: 121 DDVNKSRKTGNPNSSNNERSDQSGGGLKNGTNKLGNGKPKQHSSFGGTLLVKDGMAPPSG 180

Query: 181 SNTGEVQSENHQQGRLGNYPNAVTIAEHDSETYYSQYLQGTEGSASGHKDLAMENGRGFG 240
           SNTGE QSENHQQGRLGNYPNAVTIAEHDSE YYSQYLQGTEGSASGHKDLAMENG GFG
Sbjct: 181 SNTGEAQSENHQQGRLGNYPNAVTIAEHDSEMYYSQYLQGTEGSASGHKDLAMENGCGFG 240

Query: 241 RRDVFLLGEPGESLRAILTDPVTGSLMDDAMILPCGHSFGRGGIEHVLRL---------- 300
           RRDVFLLGEPGESLRAILTDPVTGSLMDDAMILPCGHSFG GGIEHVLRL          
Sbjct: 241 RRDVFLLGEPGESLRAILTDPVTGSLMDDAMILPCGHSFGSGGIEHVLRLKSCYTCSQLV 300

Query: 301 --------VTLQAAVRAFRREEELLFYRSPKRRRERFEQDKVGYSDSTMGTRRGRGVQFP 360
                   ++LQAAVRAFRREEELLFYRSPKRRRERFEQDKVGYSDSTMGTRRGRGVQFP
Sbjct: 301 SEDLIAQNLSLQAAVRAFRREEELLFYRSPKRRRERFEQDKVGYSDSTMGTRRGRGVQFP 360

Query: 361 FAVTDRVIIKGNKRTPLRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDG 417
           FAVTDRVIIKGNKRTPLRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDG
Sbjct: 361 FAVTDRVIIKGNKRTPLRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDG 420

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BLAST of Carg24473 vs. NCBI nr
Match: XP_022941845.1 (U-box domain-containing protein 62-like [Cucurbita moschata])

HSP 1 Score: 708.0 bits (1826), Expect = 1.9e-200
Identity = 406/434 (93.55%), Postives = 408/434 (94.01%), Query Frame = 0 

Query: 1   MSSQHINALNSHLLFQHEAIPFNSSTTSQRRVTDPAPKTRELCGFMDDKLFPAERDRFFA 60
           MSSQHINALNSHLLFQHEAIPFNSSTTSQRRVTDPAPKTRELCGFMDDKLFPAERDRFFA
Sbjct: 1   MSSQHINALNSHLLFQHEAIPFNSSTTSQRRVTDPAPKTRELCGFMDDKLFPAERDRFFA 60

Query: 61  HQGGDFRQSLFCDGRNWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGLVSL 120
           HQGGDFRQSLFCDGRNWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGLVSL
Sbjct: 61  HQGGDFRQSLFCDGRNWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGLVSL 120

Query: 121 DDVNKSRKTGNPNSSNNERSDQSGGGLKNGTNKLGNGKPKQHSSFGGTLLVKDGMAAPSG 180
           DDVNKSRKTGNPNSSNNERSDQSGGGLKNGTNKLGNGKPKQHSSFGGTLLVKDGMAAPSG
Sbjct: 121 DDVNKSRKTGNPNSSNNERSDQSGGGLKNGTNKLGNGKPKQHSSFGGTLLVKDGMAAPSG 180

Query: 181 SNTGEVQSENHQQGRLGNYPNAVTIAEHDSETYYSQYLQGTEGSASGHKDLAMENGRGFG 240
           SNTGE QSENHQQGRLGNYPNAVTIAEHDSETYYSQYLQGTEGSASGHKDLAME G GFG
Sbjct: 181 SNTGEAQSENHQQGRLGNYPNAVTIAEHDSETYYSQYLQGTEGSASGHKDLAMETGCGFG 240

Query: 241 RRDVFLLGEPGESLRAILTDPVTGSLMDDAMILPCGHSFGRGGIEHVLRL---------- 300
           RRDVFLLGEPGESLRAILTDPVTGSLMDDAMILPCGHSFG GGIEHVLRL          
Sbjct: 241 RRDVFLLGEPGESLRAILTDPVTGSLMDDAMILPCGHSFGSGGIEHVLRLKSCYTCSQLV 300

Query: 301 --------VTLQAAVRAFRREEELLFYRSPKRRRERFEQDKVGYSDSTMGTRRGRGVQFP 360
                   ++LQAAVRAFRREEELLFYRSPKRRRERFEQDKVGYSD TMGTRRGRGVQFP
Sbjct: 301 SEDLIAQNLSLQAAVRAFRREEELLFYRSPKRRRERFEQDKVGYSDLTMGTRRGRGVQFP 360

Query: 361 FAVTDRVIIKGNKRTPLRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDG 417
           FAVTDRVIIKGNKRTPLRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPND 
Sbjct: 361 FAVTDRVIIKGNKRTPLRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDR 420

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BLAST of Carg24473 vs. NCBI nr
Match: XP_022995804.1 (U-box domain-containing protein 62-like [Cucurbita maxima])

HSP 1 Score: 699.5 bits (1804), Expect = 6.8e-198
Identity = 402/434 (92.63%), Postives = 407/434 (93.78%), Query Frame = 0 

Query: 1   MSSQHINALNSHLLFQHEAIPFNSSTTSQRRVTDPAPKTRELCGFMDDKLFPAERDRFFA 60
           MSSQHINALNSHLLFQHEAIPFNSSTTSQRRVTDP+PKTRELCGFMDDKLFP ERDRFFA
Sbjct: 1   MSSQHINALNSHLLFQHEAIPFNSSTTSQRRVTDPSPKTRELCGFMDDKLFPTERDRFFA 60

Query: 61  HQGGDFRQSLFCDGRNWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGLVSL 120
           HQGGDFRQSLFCDGRNW XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGLVSL
Sbjct: 61  HQGGDFRQSLFCDGRNW-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGLVSL 120

Query: 121 DDVNKSRKTGNPNSSNNERSDQSGGGLKNGTNKLGNGKPKQHSSFGGTLLVKDGMAAPSG 180
           DDVNKSRKTGNPNSSNNERSDQSGGGLKNGTNKLGNGKPKQHSSFGGTLLVKDGMAAPSG
Sbjct: 121 DDVNKSRKTGNPNSSNNERSDQSGGGLKNGTNKLGNGKPKQHSSFGGTLLVKDGMAAPSG 180

Query: 181 SNTGEVQSENHQQGRLGNYPNAVTIAEHDSETYYSQYLQGTEGSASGHKDLAMENGRGFG 240
           SNTGE QSENHQQGRLGNYPNAVTIAEHDSETYYSQYLQGTEGSASGHKDLAMENG GFG
Sbjct: 181 SNTGEAQSENHQQGRLGNYPNAVTIAEHDSETYYSQYLQGTEGSASGHKDLAMENGCGFG 240

Query: 241 RRDVFLLGEPGESLRAILTDPVTGSLMDDAMILPCGHSFGRGGIEHVLRL---------- 300
           RRDVFLLGEPGESLRAILTDPVTGSLMDDAMIL CGHSFG GGIEHVLRL          
Sbjct: 241 RRDVFLLGEPGESLRAILTDPVTGSLMDDAMILSCGHSFGSGGIEHVLRLKSCYTCSQLV 300

Query: 301 --------VTLQAAVRAFRREEELLFYRSPKRRRERFEQDKVGYSDSTMGTRRGRGVQFP 360
                   ++LQAAVRAFRREEELLFYRSPKRRRERFEQDK GYSDSTMGTRRGRGVQFP
Sbjct: 301 SEDLIAQNLSLQAAVRAFRREEELLFYRSPKRRRERFEQDKGGYSDSTMGTRRGRGVQFP 360

Query: 361 FAVTDRVIIKGNKRTPLRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDG 417
           FAVTDRVIIKGNKRTPLRFVGREAVVTTQCLNGWYVVKTLD+AESVKLQYRSLAKVPND 
Sbjct: 361 FAVTDRVIIKGNKRTPLRFVGREAVVTTQCLNGWYVVKTLDSAESVKLQYRSLAKVPNDA 420

[Close]
BLAST of Carg24473 vs. NCBI nr
Match: XP_022942528.1 (U-box domain-containing protein 62 isoform X1 [Cucurbita moschata])

HSP 1 Score: 532.3 bits (1370), Expect = 1.4e-147
Identity = 325/437 (74.37%), Postives = 350/437 (80.09%), Query Frame = 0 

Query: 1   MSSQHINALNSHLLFQHEAIPFNSSTTSQRRVTDPAPKTRELCGFMDDKLFPAERDRFFA 60
           MSS+ +N LNSHL+FQ +A+PFN +TTSQRRV DPAPKTRELCGFMDDKL P +RDRFF 
Sbjct: 1   MSSEDMNGLNSHLVFQEDAMPFNCATTSQRRVADPAPKTRELCGFMDDKLLPVDRDRFFV 60

Query: 61  HQGGDFRQSLFCDGRNW--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGLV 120
           HQG DFR+S+F   RNW    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  EGL 
Sbjct: 61  HQGEDFRRSVFGHSRNWNGNEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVEGLA 120

Query: 121 SLDDVNKSRKTGNPNSSNNERSDQSGGGLKNGTNKLGNGKPKQHSSFGGTLLVKDGMAAP 180
           SLDDVNK  KT NPN +N + SDQS  GLKNGTNKLGNGK K HSSFGGTLLVKDG+   
Sbjct: 121 SLDDVNKCTKTANPNITNKDISDQSSDGLKNGTNKLGNGKLKHHSSFGGTLLVKDGLVGS 180

Query: 181 SGSNTGEVQSENHQQGRLGNYPNAVTIAEHDSETYYSQYLQGTEGSASGHKDLAMENGRG 240
           SG NTG  +          N PNAVTIAE ++  YYSQYLQGTEGS SG KDLA+ENG G
Sbjct: 181 SGCNTGATR----------NDPNAVTIAEPEN-AYYSQYLQGTEGSTSGQKDLAIENGCG 240

Query: 241 FGRRDVFLLGEPGESLRAILTDPVTGSLMDDAMILPCGHSFGRGGIEHVLRL-------- 300
           FGRRDV    EP ESLRAILTDPVTG+LMDDAMILPCGHSFG GGI+HVLR+        
Sbjct: 241 FGRRDVSFSSEPEESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQ 300

Query: 301 ----------VTLQAAVRAFRREEELLFYRSPKRRRERFEQDKVGYSDST-MGTRRGRGV 360
                     ++LQAAV+AFRREEELLFYRSPKRRRERFEQDK GY DST M T RGRGV
Sbjct: 301 SVSEDSIAQNLSLQAAVQAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGV 360

Query: 361 QFPFAVTDRVIIKGNKRTPLRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVP 417
           QFPFAVTDRVIIKGNKRTP RFVGREAVVT QCLNGWYVVKTLDNAESVKLQYRSLA+VP
Sbjct: 361 QFPFAVTDRVIIKGNKRTPQRFVGREAVVTAQCLNGWYVVKTLDNAESVKLQYRSLARVP 420

[Close]
BLAST of Carg24473 vs. NCBI nr
Match: XP_023541871.1 (U-box domain-containing protein 62 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 531.6 bits (1368), Expect = 2.5e-147
Identity = 320/437 (73.23%), Postives = 346/437 (79.18%), Query Frame = 0 

Query: 1   MSSQHINALNSHLLFQHEAIPFNSSTTSQRRVTDPAPKTRELCGFMDDKLFPAERDRFFA 60
           MSS+ +N LNSHL+FQ +A+PFN +TTSQRRV DPAPKTRELCGFMDDKL P +RDRFF 
Sbjct: 1   MSSEDMNGLNSHLVFQEDAMPFNCATTSQRRVADPAPKTRELCGFMDDKLLPVDRDRFFV 60

Query: 61  HQGGDFRQSLFCDGRNW--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGLV 120
           HQG DFR+S+F   RNW         XXXXXXXXXXXXXXXXXXXXXXXXXXXXX EGL 
Sbjct: 61  HQGEDFRRSVFGHSRNWNGNEGARTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEGLA 120

Query: 121 SLDDVNKSRKTGNPNSSNNERSDQSGGGLKNGTNKLGNGKPKQHSSFGGTLLVKDGMAAP 180
           SLDDVNK  KT NPN++N + SDQS  GLKNG NKLGNGK K HSSFGGTLLVKDG+   
Sbjct: 121 SLDDVNKCTKTANPNNTNKDISDQSSDGLKNGANKLGNGKLKHHSSFGGTLLVKDGLVGS 180

Query: 181 SGSNTGEVQSENHQQGRLGNYPNAVTIAEHDSETYYSQYLQGTEGSASGHKDLAMENGRG 240
           SG NTG  +          N PNAVTIAE ++  YYSQYLQGTEGS SG KDLA+ENG G
Sbjct: 181 SGCNTGATR----------NDPNAVTIAEPEN-AYYSQYLQGTEGSTSGQKDLAIENGCG 240

Query: 241 FGRRDVFLLGEPGESLRAILTDPVTGSLMDDAMILPCGHSFGRGGIEHVLRL-------- 300
           FGRRDV    EP ESLRAILTDPVTG+LMDDAMILPCGHSFG GGI+HVLR+        
Sbjct: 241 FGRRDVSFSSEPEESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQ 300

Query: 301 ----------VTLQAAVRAFRREEELLFYRSPKRRRERFEQDKVGYSDST-MGTRRGRGV 360
                     ++LQAAV+AFRREEELLFYRSPKRRRERFEQDK GY DST M T RGRGV
Sbjct: 301 SVSEDSIAQNLSLQAAVQAFRREEELLFYRSPKRRRERFEQDKGGYGDSTLMDTPRGRGV 360

Query: 361 QFPFAVTDRVIIKGNKRTPLRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVP 417
           QFPFAVTDRVIIKGNKRTP RFVGREAVVT QCLNGWYVVKTLDNAESVKLQYRSLA+VP
Sbjct: 361 QFPFAVTDRVIIKGNKRTPQRFVGREAVVTAQCLNGWYVVKTLDNAESVKLQYRSLARVP 420

[Close]
BLAST of Carg24473 vs. TAIR10
Match: AT5G05230.1 (RING/U-box superfamily protein)

HSP 1 Score: 216.9 bits (551), Expect = 2.4e-56
Identity = 125/239 (52.30%), Postives = 153/239 (64.02%), Query Frame = 0 

Query: 202 AVTIAEHDSETYYSQYLQGTEG---SASGHKDLAMENGRGF-GRRDVFLLGEPG-ESLRA 261
           AV +   D+  YYSQ+ +  E    S +    +A +NG  F GRRD+        ESLR 
Sbjct: 125 AVIVVGQDNAAYYSQHFKTVEASFVSRNEESSIAADNGCDFSGRRDLSSSSSNSIESLRT 184

Query: 262 ILTDPVTGSLMDDAMILPCGHSFGRGGIEHVLRL------------------VTLQAAVR 321
           IL+DP TGSLM DAMILPCGH+FG GGIE V ++                  +TL+ AV+
Sbjct: 185 ILSDPTTGSLMADAMILPCGHTFGAGGIEQVKQMKACCTCSQPVSEDSITPNLTLRVAVQ 244

Query: 322 AFRREEELLFYRSPKRRRERFEQDKVGYS-DSTMGTRRGRGVQFPFAVTDRVIIKGNKRT 381
           AF REE        KR+RE F+Q++  +   +  G  R +   FPFAV DRVIIKGNKRT
Sbjct: 245 AFCREENSQSNHPSKRKREGFDQERRAFGVTNHSGRSRNKSNHFPFAVADRVIIKGNKRT 304

Query: 382 PLRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDGASKTTTSKIATNWV 417
           P RFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAK P D ++K T +K+ +NW+
Sbjct: 305 PPRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKAPEDPSAKATPNKMVSNWL 363

[Close]
BLAST of Carg24473 vs. TAIR10
Match: AT2G40640.1 (RING/U-box superfamily protein)

HSP 1 Score: 173.7 bits (439), Expect = 2.4e-43
Identity = 89/184 (48.37%), Postives = 128/184 (69.57%), Query Frame = 0 

Query: 252 ESLRAILTDPVTGSLMDDAMILPCGHSFGRGGIEHVLRL------------------VTL 311
           ESL+AIL+DPVTG+LM+DA ILPCGHSFG GG++ V ++                  ++L
Sbjct: 200 ESLKAILSDPVTGALMNDATILPCGHSFGAGGLKEVKKMKACFTCSQPTLEGSEKPNLSL 259

Query: 312 QAAVRAFRREEELLFYRSPKRRRERFEQDK-VGYSDSTMGTRRGRGVQFPFAVTDRVIIK 371
           +  V AFR+EE+     + KRR+ER +Q +     + T   +  RG+QFPF++ D +II+
Sbjct: 260 RIVVHAFRQEEDSDHIHTLKRRKERSDQKRSFCIPNITETPKSSRGIQFPFSIGDHIIIE 319

Query: 372 GNKRTPLRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDGASKTTTSKIA 417
           GNKRTP RFVGR AV+ TQCLNGWYVVKT+DN+ES+KLQ+ SLAK+ ++ ++K T +++ 
Sbjct: 320 GNKRTPPRFVGRIAVIMTQCLNGWYVVKTVDNSESIKLQHCSLAKISDNSSTKVTVAEMP 379

[Close]
BLAST of Carg24473 vs. TAIR10
Match: AT3G19895.1 (RING/U-box superfamily protein)

HSP 1 Score: 116.3 bits (290), Expect = 4.5e-26
Identity = 64/170 (37.65%), Postives = 97/170 (57.06%), Query Frame = 0 

Query: 253 SLRAILTDPVTGSLMDDAMILPCGHSFGRGGIEHVLRL--------------VTLQAAVR 312
           SLR++L+DP++G+ ++DAM++ CGHSFG   +  VL +              +    A+R
Sbjct: 369 SLRSVLSDPISGAFLEDAMVVSCGHSFGGLMLRRVLEMSRCTLCNTEIESGSLVPNHALR 428

Query: 313 A-------FRREEELLFYRSPKRRRERFEQDKVGYSDSTMGTRRGRGVQFPFAVTDRVII 372
           A                        E  +Q  V   D        R V +PFAV ++V+I
Sbjct: 429 AAXXXXXXXXXXXXXXXXXXXXXXXEMSDQMDVENGDPATDDGMHRVVHYPFAVNEKVLI 488

Query: 373 KGNKRTPLRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPND 402
           KGN+RTP +FVG+EA+VT+QCLNGWY++K +++ ++V+LQYRSL K+ ND
Sbjct: 489 KGNRRTPEKFVGKEAIVTSQCLNGWYLLKIVESGDNVRLQYRSLKKMVND 538

[Close]
BLAST of Carg24473 vs. Swiss-Prot
Match: sp|Q6DBN5|PUB62_ARATH (U-box domain-containing protein 62 OS=Arabidopsis thaliana OX=3702 GN=PUB62 PE=2 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 4.4e-55
Identity = 125/239 (52.30%), Postives = 153/239 (64.02%), Query Frame = 0 

Query: 202 AVTIAEHDSETYYSQYLQGTEG---SASGHKDLAMENGRGF-GRRDVFLLGEPG-ESLRA 261
           AV +   D+  YYSQ+ +  E    S +    +A +NG  F GRRD+        ESLR 
Sbjct: 125 AVIVVGQDNAAYYSQHFKTVEASFVSRNEESSIAADNGCDFSGRRDLSSSSSNSIESLRT 184

Query: 262 ILTDPVTGSLMDDAMILPCGHSFGRGGIEHVLRL------------------VTLQAAVR 321
           IL+DP TGSLM DAMILPCGH+FG GGIE V ++                  +TL+ AV+
Sbjct: 185 ILSDPTTGSLMADAMILPCGHTFGAGGIEQVKQMKACCTCSQPVSEDSITPNLTLRVAVQ 244

Query: 322 AFRREEELLFYRSPKRRRERFEQDKVGYS-DSTMGTRRGRGVQFPFAVTDRVIIKGNKRT 381
           AF REE        KR+RE F+Q++  +   +  G  R +   FPFAV DRVIIKGNKRT
Sbjct: 245 AFCREENSQSNHPSKRKREGFDQERRAFGVTNHSGRSRNKSNHFPFAVADRVIIKGNKRT 304

Query: 382 PLRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDGASKTTTSKIATNWV 417
           P RFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAK P D ++K T +K+ +NW+
Sbjct: 305 PPRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKAPEDPSAKATPNKMVSNWL 363

[Close]
BLAST of Carg24473 vs. Swiss-Prot
Match: sp|Q58FY4|PUB63_ARATH (U-box domain-containing protein 63 OS=Arabidopsis thaliana OX=3702 GN=PUB63 PE=2 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 4.3e-42
Identity = 89/184 (48.37%), Postives = 128/184 (69.57%), Query Frame = 0 

Query: 252 ESLRAILTDPVTGSLMDDAMILPCGHSFGRGGIEHVLRL------------------VTL 311
           ESL+AIL+DPVTG+LM+DA ILPCGHSFG GG++ V ++                  ++L
Sbjct: 200 ESLKAILSDPVTGALMNDATILPCGHSFGAGGLKEVKKMKACFTCSQPTLEGSEKPNLSL 259

Query: 312 QAAVRAFRREEELLFYRSPKRRRERFEQDK-VGYSDSTMGTRRGRGVQFPFAVTDRVIIK 371
           +  V AFR+EE+     + KRR+ER +Q +     + T   +  RG+QFPF++ D +II+
Sbjct: 260 RIVVHAFRQEEDSDHIHTLKRRKERSDQKRSFCIPNITETPKSSRGIQFPFSIGDHIIIE 319

Query: 372 GNKRTPLRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDGASKTTTSKIA 417
           GNKRTP RFVGR AV+ TQCLNGWYVVKT+DN+ES+KLQ+ SLAK+ ++ ++K T +++ 
Sbjct: 320 GNKRTPPRFVGRIAVIMTQCLNGWYVVKTVDNSESIKLQHCSLAKISDNSSTKVTVAEMP 379

[Close]
BLAST of Carg24473 vs. TrEMBL
Match: tr|A0A1S3BYQ9|A0A1S3BYQ9_CUCME (U-box domain-containing protein 62-like OS=Cucumis melo OX=3656 GN=LOC103495030 PE=4 SV=1)

HSP 1 Score: 522.7 bits (1345), Expect = 7.5e-145
Identity = 315/436 (72.25%), Postives = 346/436 (79.36%), Query Frame = 0 

Query: 1   MSSQHINALNSHLLFQHEAIPFNSSTTSQRRVTDPAPKTRELCGFMDDKLFP-AERDRFF 60
           MSS+ IN L+SHL+FQ+E++PFN S+T  RR+ DP PKTRELCGFMDDKLFP  +RDRFF
Sbjct: 1   MSSEDINGLDSHLVFQNESLPFNCSSTPHRRLPDPPPKTRELCGFMDDKLFPVVDRDRFF 60

Query: 61  AHQGGDFRQSLFCDGRNWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGLVS 120
           + QG DFR+++F   RNW         XXXXXXXXXXXXXXXXXXXXXXXXXXXX  LVS
Sbjct: 61  SQQGEDFRRNVFGHNRNW---NGTARTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLVS 120

Query: 121 LDDVNKSRKTGNPNSSNNERSDQSGGGLKNGTNKLGNGKPKQHSSFGGTLLVKDGMAAPS 180
           LDDVNK  KT NP  +NN+RSDQS  GLKNG NKLGNGK KQHSSF GTLLVKD +   S
Sbjct: 121 LDDVNKCSKTANPIDNNNDRSDQSSEGLKNGINKLGNGKLKQHSSFCGTLLVKDALVGSS 180

Query: 181 GSNTGEVQSENHQQGRLGNYPNAVTIAEHDSETYYSQYLQGTEGSASGHKDLAMENGRGF 240
           G+     QSEN+ Q RL NYPNAVT+AE DSE YYSQYLQ  EGSASG KDL+ ENG GF
Sbjct: 181 GA----TQSENNPQARLRNYPNAVTVAEPDSEAYYSQYLQSNEGSASGQKDLSTENGCGF 240

Query: 241 GRRDVFLLGEPGESLRAILTDPVTGSLMDDAMILPCGHSFGRGGIEHVLRL--------- 300
           GRRDV   GEPGESLRAILTDPVTG+LM+DAMILPCGHSFG GGI+HVLR+         
Sbjct: 241 GRRDVSFSGEPGESLRAILTDPVTGALMNDAMILPCGHSFGSGGIQHVLRVRSCYSCSQS 300

Query: 301 ---------VTLQAAVRAFRREEELLFYRSPKRRRERFEQDKVGYSDST-MGTRRGRGVQ 360
                    ++LQAAV+AF REEELLF+RSPKRRRERFEQDK GY D T M T+RGRGVQ
Sbjct: 301 VSEDSVAQNLSLQAAVQAFCREEELLFHRSPKRRRERFEQDKCGYGDLTLMDTQRGRGVQ 360

Query: 361 FPFAVTDRVIIKGNKRTPLRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPN 417
           FPFAVTDRVIIKGNKRTP RFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPN
Sbjct: 361 FPFAVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPN 420

[Close]
BLAST of Carg24473 vs. TrEMBL
Match: tr|A0A1S3C4H0|A0A1S3C4H0_CUCME (U-box domain-containing protein 62-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496749 PE=4 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 1.6e-139
Identity = 302/436 (69.27%), Postives = 324/436 (74.31%), Query Frame = 0 

Query: 1   MSSQHINALNSHLLFQHEAIPFNSSTTSQRRVTDPAPKTRELCGFMDDKLFP-AERDRFF 60
           MSSQHIN LNSHLLFQ E++PFN S+T  RR+ DP PKTRELCGFMDDKLFP  +RDRFF
Sbjct: 1   MSSQHINGLNSHLLFQDESLPFNCSSTPHRRLPDPPPKTRELCGFMDDKLFPVVDRDRFF 60

Query: 61  AHQGGDFRQSLFCDGRNWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGLVS 120
           + QG DFR+S+F   RNW                XXXXXXXXXXXXXXXXXXXXX     
Sbjct: 61  SQQGEDFRRSVFGPNRNW---NGTARTGSGKGSDXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 LDDVNKSRKTGNPNSSNNERSDQSGGGLKNGTNKLGNGKPKQHSSFGGTLLVKDGMAAPS 180
                                    GGLKNGTNKLGNGK KQHSSFGGTLLVKD +   S
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXSGGLKNGTNKLGNGKLKQHSSFGGTLLVKDALVGSS 180

Query: 181 GSNTGEVQSENHQQGRLGNYPNAVTIAEHDSETYYSQYLQGTEGSASGHKDLAMENGRGF 240
           G++    QSEN+ QGRLGNYPNAVT+AE DSE YYSQYLQ  EGSAS  KDL+MENG GF
Sbjct: 181 GAS----QSENNPQGRLGNYPNAVTVAEPDSEAYYSQYLQSNEGSASEQKDLSMENGCGF 240

Query: 241 GRRDVFLLGEPGESLRAILTDPVTGSLMDDAMILPCGHSFGRGGIEHVLRL--------- 300
           GRRDV   GEPGESLRAILTDPVTG+LMDDAMILPCGHSFG GGI+HVLR+         
Sbjct: 241 GRRDVLFSGEPGESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRVKSCYSCSQS 300

Query: 301 ---------VTLQAAVRAFRREEELLFYRSPKRRRERFEQDKVGYSDST-MGTRRGRGVQ 360
                    ++LQAAVRAFRREEELLFY SPKRRRERFEQDK GY D T M T+RGRGVQ
Sbjct: 301 VSEDSIAQNLSLQAAVRAFRREEELLFYHSPKRRRERFEQDKGGYGDLTLMATQRGRGVQ 360

Query: 361 FPFAVTDRVIIKGNKRTPLRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPN 417
           FPFAVTDRVIIKGNKRTP RFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPN
Sbjct: 361 FPFAVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPN 420

[Close]
BLAST of Carg24473 vs. TrEMBL
Match: tr|A0A0A0LIQ7|A0A0A0LIQ7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G852550 PE=4 SV=1)

HSP 1 Score: 475.3 bits (1222), Expect = 1.4e-130
Identity = 288/436 (66.06%), Postives = 319/436 (73.17%), Query Frame = 0 

Query: 1   MSSQHINALNSHLLFQHEAIPFNSSTTSQRRVTDPAPKTRELCGFMDDKLFP-AERDRFF 60
           MSS+ IN L+SHL+FQ+E++PFN S+T  RR+ DP PKTRELCGFMDDKLFP  +RDRFF
Sbjct: 1   MSSEDINGLDSHLVFQNESLPFNCSSTPHRRLPDPPPKTRELCGFMDDKLFPIVDRDRFF 60

Query: 61  AHQGGDFRQSLFCDGRNWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGLVS 120
           + QG DFR+++F   RNW                XXXXXXXXXXXXXXXXXXXXX     
Sbjct: 61  SQQGEDFRRNVFGHNRNW---NGSARTGSGKGSDXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 LDDVNKSRKTGNPNSSNNERSDQSGGGLKNGTNKLGNGKPKQHSSFGGTLLVKDGMAAPS 180
                                      LKNG NKLGNGK KQHSSF GTLLVKD     S
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXLKNGINKLGNGKLKQHSSFCGTLLVKDAFVGSS 180

Query: 181 GSNTGEVQSENHQQGRLGNYPNAVTIAEHDSETYYSQYLQGTEGSASGHKDLAMENGRGF 240
           G+     QSEN+ QGRLGNYPNAVT+AE DSE YYSQYLQ  EGSASG K+L+MENG GF
Sbjct: 181 GA----TQSENNPQGRLGNYPNAVTVAEPDSEAYYSQYLQSNEGSASGQKNLSMENGCGF 240

Query: 241 GRRDVFLLGEPGESLRAILTDPVTGSLMDDAMILPCGHSFGRGGIEHVLRL--------- 300
           GRRDV   GEPGESLR+ILTDPVTG+LM+DAMILPCGHSFG GGI+HVL++         
Sbjct: 241 GRRDVSFSGEPGESLRSILTDPVTGALMNDAMILPCGHSFGSGGIQHVLKVRSCYSCSQS 300

Query: 301 ---------VTLQAAVRAFRREEELLFYRSPKRRRERFEQDKVGYSDST-MGTRRGRGVQ 360
                    ++LQAAV+AF REEELLF+RSPKRRRERFEQDK GY D T M T+RGRGVQ
Sbjct: 301 VSEDSIAQNLSLQAAVQAFCREEELLFHRSPKRRRERFEQDKGGYGDLTLMDTQRGRGVQ 360

Query: 361 FPFAVTDRVIIKGNKRTPLRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPN 417
           FPFAVTDRVIIKGNKRTP RFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPN
Sbjct: 361 FPFAVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPN 420

[Close]
BLAST of Carg24473 vs. TrEMBL
Match: tr|A0A0A0KQN9|A0A0A0KQN9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222470 PE=4 SV=1)

HSP 1 Score: 466.5 bits (1199), Expect = 6.4e-128
Identity = 291/436 (66.74%), Postives = 317/436 (72.71%), Query Frame = 0 

Query: 1   MSSQHINALNSHLLFQHEAIPFNSSTTSQRRVTDPAPKTRELCGFMDDKLFPA-ERDRFF 60
           MSS+ IN LNSHL+FQ E++PFN S+T  RR+ DP PKTRE CGFMDDKLFPA +RDRFF
Sbjct: 1   MSSEDINGLNSHLVFQDESLPFNCSSTPHRRLPDPPPKTRERCGFMDDKLFPAVDRDRFF 60

Query: 61  AHQGGDFRQSLFCDGRNWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGLVS 120
           + QG DFR+++F   RNW             XXXXXXXXXXXXXXXXXXXXXXXX     
Sbjct: 61  SQQGEDFRRNVFGHNRNW--NGTARTGSEEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 LDDVNKSRKTGNPNSSNNERSDQSGGGLKNGTNKLGNGKPKQHSSFGGTLLVKDGMAAPS 180
                    T NP  SNN+RSDQS GGLKNGT+KLGNGK KQHSSF     VKD +A  S
Sbjct: 121 XXXXXXXXXTANPICSNNDRSDQSSGGLKNGTDKLGNGKRKQHSSF-----VKDALAGSS 180

Query: 181 GSNTGEVQSENHQQGRLGNYPNAVTIAEHDSETYYSQYLQGTEGSASGHKDLAMENGRGF 240
               G  QSEN+ QGRLGNYPNAVT AE DSE YYSQYLQ  EGSAS  KDL++ENG GF
Sbjct: 181 ----GVTQSENNPQGRLGNYPNAVTAAEPDSEAYYSQYLQSNEGSASEQKDLSIENGCGF 240

Query: 241 GRRDVFLLGEPGESLRAILTDPVTGSLMDDAMILPCGHSFGRGGIEHVLRL--------- 300
           GRRDV   GEP ESLRAILTDPVTG+LMDDAMILPCGHSFG GGI+HVLRL         
Sbjct: 241 GRRDVSFSGEPRESLRAILTDPVTGALMDDAMILPCGHSFGSGGIQHVLRLKSCYSCSQS 300

Query: 301 ---------VTLQAAVRAFRREEELLFYRSPKRRRERFEQDKVGYSDST-MGTRRGRGVQ 360
                    ++LQAAV+AFRRE            RERFEQ+K GY D T M T+RGRGVQ
Sbjct: 301 VSEDSIAQNLSLQAAVQAFRREXXXXXXXXXXXXRERFEQEKGGYGDLTLMDTQRGRGVQ 360

Query: 361 FPFAVTDRVIIKGNKRTPLRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPN 417
           FPFAVTDRVIIKGNKRTP RFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKV N
Sbjct: 361 FPFAVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVQN 420

[Close]
BLAST of Carg24473 vs. TrEMBL
Match: tr|A0A1S3C4D8|A0A1S3C4D8_CUCME (U-box domain-containing protein 62-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496749 PE=4 SV=1)

HSP 1 Score: 453.4 bits (1165), Expect = 5.6e-124
Identity = 281/418 (67.22%), Postives = 302/418 (72.25%), Query Frame = 0 

Query: 1   MSSQHINALNSHLLFQHEAIPFNSSTTSQRRVTDPAPKTRELCGFMDDKLFP-AERDRFF 60
           MSSQHIN LNSHLLFQ E++PFN S+T  RR+ DP PKTRELCGFMDDKLFP  +RDRFF
Sbjct: 1   MSSQHINGLNSHLLFQDESLPFNCSSTPHRRLPDPPPKTRELCGFMDDKLFPVVDRDRFF 60

Query: 61  AHQGGDFRQSLFCDGRNWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGLVS 120
           + QG DFR+S+F   RNW                XXXXXXXXXXXXXXXXXXXXX     
Sbjct: 61  SQQGEDFRRSVFGPNRNW---NGTARTGSGKGSDXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 LDDVNKSRKTGNPNSSNNERSDQSGGGLKNGTNKLGNGKPKQHSSFGGTLLVKDGMAAPS 180
                                    GGLKNGTNKLGNGK KQHSSFGGTLLVKD +   S
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXSGGLKNGTNKLGNGKLKQHSSFGGTLLVKDALVGSS 180

Query: 181 GSNTGEVQSENHQQGRLGNYPNAVTIAEHDSETYYSQYLQGTEGSASGHKDLAMENGRGF 240
           G++    QSEN+ QGRLGNYPNAVT+AE DSE YYSQYLQ  EGSAS  KDL+MENG GF
Sbjct: 181 GAS----QSENNPQGRLGNYPNAVTVAEPDSEAYYSQYLQSNEGSASEQKDLSMENGCGF 240

Query: 241 GRRDVFLLGEPGESLRAILTDPVTGSLMDDAMILPCGHSFGRGGIEHVLRLVTLQAAVRA 300
           GRRDV   GEPGESLRAILTDPVT     + + L           +  L   +LQAAVRA
Sbjct: 241 GRRDVLFSGEPGESLRAILTDPVT-----NLVTLALSQFLKTLLPKTYLGKTSLQAAVRA 300

Query: 301 FRREEELLFYRSPKRRRERFEQDKVGYSDST-MGTRRGRGVQFPFAVTDRVIIKGNKRTP 360
           FRREEELLFY SPKRRRERFEQDK GY D T M T+RGRGVQFPFAVTDRVIIKGNKRTP
Sbjct: 301 FRREEELLFYHSPKRRRERFEQDKGGYGDLTLMATQRGRGVQFPFAVTDRVIIKGNKRTP 360

Query: 361 LRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDGASKTTTSKIATNWV 417
            RFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPND  SKT T K+  NW+
Sbjct: 361 QRFVGREAVVTTQCLNGWYVVKTLDNAESVKLQYRSLAKVPNDARSKTITRKVTPNWL 406

The following BLAST results are available for this feature:
BLAST of Carg24473 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023532305.14.6e-20294.01U-box domain-containing protein 62 [Cucurbita pepo subsp. pepo][more]
XP_022941845.11.9e-20093.55U-box domain-containing protein 62-like [Cucurbita moschata][more]
XP_022995804.16.8e-19892.63U-box domain-containing protein 62-like [Cucurbita maxima][more]
XP_022942528.11.4e-14774.37U-box domain-containing protein 62 isoform X1 [Cucurbita moschata][more]
XP_023541871.12.5e-14773.23U-box domain-containing protein 62 [Cucurbita pepo subsp. pepo][more]
BLAST of Carg24473 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G05230.12.4e-5652.30RING/U-box superfamily protein[more]
AT2G40640.12.4e-4348.37RING/U-box superfamily protein[more]
AT3G19895.14.5e-2637.65RING/U-box superfamily protein[more]
BLAST of Carg24473 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q6DBN5|PUB62_ARATH4.4e-5552.30U-box domain-containing protein 62 OS=Arabidopsis thaliana OX=3702 GN=PUB62 PE=2... [more]
sp|Q58FY4|PUB63_ARATH4.3e-4248.37U-box domain-containing protein 63 OS=Arabidopsis thaliana OX=3702 GN=PUB63 PE=2... [more]
BLAST of Carg24473 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BYQ9|A0A1S3BYQ9_CUCME7.5e-14572.25U-box domain-containing protein 62-like OS=Cucumis melo OX=3656 GN=LOC103495030 ... [more]
tr|A0A1S3C4H0|A0A1S3C4H0_CUCME1.6e-13969.27U-box domain-containing protein 62-like isoform X1 OS=Cucumis melo OX=3656 GN=LO... [more]
tr|A0A0A0LIQ7|A0A0A0LIQ7_CUCSA1.4e-13066.06Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G852550 PE=4 SV=1[more]
tr|A0A0A0KQN9|A0A0A0KQN9_CUCSA6.4e-12866.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222470 PE=4 SV=1[more]
tr|A0A1S3C4D8|A0A1S3C4D8_CUCME5.6e-12467.22U-box domain-containing protein 62-like isoform X2 OS=Cucumis melo OX=3656 GN=LO... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0016567 protein ubiquitination
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0004842 ubiquitin-protein transferase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24473-RACarg24473-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..117
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 73..87
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 180..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..163
NoneNo IPR availablePANTHERPTHR33644:SF3U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATEDcoord: 7..416
NoneNo IPR availablePANTHERPTHR33644FAMILY NOT NAMEDcoord: 7..416
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 257..290