Carg24462 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24462
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	serine/arginine repetitive matrix protein 2-like isoform X2
Location	Cucurbita_argyrosperma_scaffold_303 : 24004 .. 25990 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCCGCCTTGCTCCGTCATCCCCGGTCGGATTGCAAACCCCAGGTACCATTTCAATGTTTTTCATCAATGTAGTTGAAGAATTCGGCGTTTGAGTGAGTTCTGTGCGAGAAAATGCATTTGAAGAGAACTGGGAATTTGTCGTTGCTTCTAGGGTTTTTCTGGTGAACTGATGGGTTTTGCAGGGATTTTCCAGATCTGGGCTGTGTGTGTTTGCTTGGGTTTGATGGGTAGAATTTGTTTATCTGGAAGTTGTAAATTGTTAACGAGTGATTGTCTAATGATATATGCTTGATGATTTTTGACGACCTGTTCTTCTAATTTGTGTTGCTTATGCTGTTGAACTTAGTAGCATTGTGTTTGTTTCAGTATCTGCTTCTTTGTTTAGCTGATCGAAATGAGTGGTGGAGATGATGATGGGCCTTTAGATTATGCCACCATTCAGATCATACCTTCTCAGAACAGGTTTTCCTCTTTCTTTTTTACCATTTCTGTTTGAAACAACAATGTAGATGAGATTCTGCCTGTACAAAACATGTTCTACCATTACTGTCGGTCGATGTCGATTCAATTACATGATGAACACGAGGAACGAGTATCATAGGATATGTGAGATCCCACATCGGTTGGGGAGGTGGGAAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGACGAGAGTCTCCCCGGTGTCTGCATTCTCCTCACTATCACTTTGTTTAATAAAATTTCATAATTTCGTGTCCTGAAAGCTTTTCCCCTCTTGATGGGAATGAGTGTGTACAGATATGAGGCATTTGCTTGTTGTGGCAATAAGGTAGATGTTCTGGCTGATGGGATTCTGGATACCCTTTTGCCACATTTACCGGAACTACAAGAGCTGAATGCCAAAGAATCTAAAGCGAGCATTAAACTCCAATCACCAGCTTCTTCAGCTGGTTCAGCATGGTTCACAAAATCTACTCTAACCAGGTTATTCTAACTACATTATTTGGATTATCAGCTGAAGTGTGCATTTTTGTTAATACTCTTACTTCTCTACTCAGGTTCCTCCATCTAGTTGGCTCGCCAGAGTTAACGAAAATTACGAAAACGATGAACGAGATGGCTCAACTAGAAGAAACCAGGAGATTTCATGTTTCTTTATATGGTCAGGTAGTGATTCATGCTATCTTTTGAAGCCATTTTCCTATGATGTTTCCTTGCTGGTGAAGTTTAATTTATTGTGTTGACAGTCTGGAGCTGAATTTACTTCATCAGCTGAATCTAAGTAGGTTATTTGAATTCTTAATTATCTGTTCTGTTTCTTACAAAACATAGAATTGGTTTGTTCAACTGTGAAATATGCAAACATGAATGCCAGAAACGAATTGTTGCGAGCTATGGAATTGAGGCTTACAGCATTGAATAAGGACTTCACTGCATCATTTGAAAAGGGTTGCAATGCAACCTGCAGTTCTAAGGAAATCAGTCATTTAGTGAAGTTTATGGAACATTTCGGAGCTACAAATTTGAAGAAGGTTATTCCTGGTAAAAGCTTGCCTGTTTGTTGTTAACAAAATGCAAACAAACTTCATTTCTGCTATATCCGTTAACTCAGTATGTGCTCGATCTTCACAACTCTGCAGAAACTGTGCATACAAATATTTGGAACTAAATCCAAAGAGTGATAGTATCGATCCTGTTGATGACGACGACGATGATGATAGTAGGCACACGGTTACATCGAATTCGTTAACTCAAGTGAATTATGGTGTTTCACCTGCAAAAGTTGCACAGGTTGAGCGACAGGATTCATCAGAAAGTGAGGAGTCTGATGAAAATGGGACACTGGTAGAAAGAAGTAGAACAATGGCACGGTCAGCGCCTCCCAGAAGGTCAGCATCACCCATGAGAAGGGTTCAGATAGGAAGAACGGGATCCCGCCGAGCACCTGCGATAATGATTAGGAGTCTGCAAACAAGAGAGTAG

mRNA sequence

ATGTTCCGCCTTGCTCCGTCATCCCCGGTCGGATTGCAAACCCCAGGTACCATTTCAATGTTTTTCATCAATGGATTTTCCAGATCTGGGCTGTGTGTGTTTGCTTGGCTGATCGAAATGAGTGGTGGAGATGATGATGGGCCTTTAGATTATGCCACCATTCAGATCATACCTTCTCAGAACAGATATGAGGCATTTGCTTGTTGTGGCAATAAGGTAGATGTTCTGGCTGATGGGATTCTGGATACCCTTTTGCCACATTTACCGGAACTACAAGAGCTGAATGCCAAAGAATCTAAAGCGAGCATTAAACTCCAATCACCAGCTTCTTCAGCTGGTTCAGCATGGTTCACAAAATCTACTCTAACCAGGTTCCTCCATCTAGTTGGCTCGCCAGAGTTAACGAAAATTACGAAAACGATGAACGAGATGGCTCAACTAGAAGAAACCAGGAGATTTCATGTTTCTTTATATGAATTGGTTTGTTCAACTGTGAAATATGCAAACATGAATGCCAGAAACGAATTGTTGCGAGCTATGGAATTGAGGCTTACAGCATTGAATAAGGACTTCACTGCATCATTTGAAAAGGGTTGCAATGCAACCTGCAGTTCTAAGGAAATCAGTCATTTAGTGAAGTTTATGGAACATTTCGGAGCTACAAATTTGAAGAAGGTTATTCCTGTATGTGCTCGATCTTCACAACTCTGCAGAAACTGTGCATACAAATATTTGGAACTAAATCCAAAGAGTGATAGTATCGATCCTGTTGATGACGACGACGATGATGATAGTAGGCACACGGTTACATCGAATTCGTTAACTCAAGTGAATTATGGTGTTTCACCTGCAAAAGTTGCACAGGTTGAGCGACAGGATTCATCAGAAAGTGAGGAGTCTGATGAAAATGGGACACTGGTAGAAAGAAGTAGAACAATGGCACGGTCAGCGCCTCCCAGAAGGTCAGCATCACCCATGAGAAGGGTTCAGATAGGAAGAACGGGATCCCGCCGAGCACCTGCGATAATGATTAGGAGTCTGCAAACAAGAGAGTAG

Coding sequence (CDS)

ATGTTCCGCCTTGCTCCGTCATCCCCGGTCGGATTGCAAACCCCAGGTACCATTTCAATGTTTTTCATCAATGGATTTTCCAGATCTGGGCTGTGTGTGTTTGCTTGGCTGATCGAAATGAGTGGTGGAGATGATGATGGGCCTTTAGATTATGCCACCATTCAGATCATACCTTCTCAGAACAGATATGAGGCATTTGCTTGTTGTGGCAATAAGGTAGATGTTCTGGCTGATGGGATTCTGGATACCCTTTTGCCACATTTACCGGAACTACAAGAGCTGAATGCCAAAGAATCTAAAGCGAGCATTAAACTCCAATCACCAGCTTCTTCAGCTGGTTCAGCATGGTTCACAAAATCTACTCTAACCAGGTTCCTCCATCTAGTTGGCTCGCCAGAGTTAACGAAAATTACGAAAACGATGAACGAGATGGCTCAACTAGAAGAAACCAGGAGATTTCATGTTTCTTTATATGAATTGGTTTGTTCAACTGTGAAATATGCAAACATGAATGCCAGAAACGAATTGTTGCGAGCTATGGAATTGAGGCTTACAGCATTGAATAAGGACTTCACTGCATCATTTGAAAAGGGTTGCAATGCAACCTGCAGTTCTAAGGAAATCAGTCATTTAGTGAAGTTTATGGAACATTTCGGAGCTACAAATTTGAAGAAGGTTATTCCTGTATGTGCTCGATCTTCACAACTCTGCAGAAACTGTGCATACAAATATTTGGAACTAAATCCAAAGAGTGATAGTATCGATCCTGTTGATGACGACGACGATGATGATAGTAGGCACACGGTTACATCGAATTCGTTAACTCAAGTGAATTATGGTGTTTCACCTGCAAAAGTTGCACAGGTTGAGCGACAGGATTCATCAGAAAGTGAGGAGTCTGATGAAAATGGGACACTGGTAGAAAGAAGTAGAACAATGGCACGGTCAGCGCCTCCCAGAAGGTCAGCATCACCCATGAGAAGGGTTCAGATAGGAAGAACGGGATCCCGCCGAGCACCTGCGATAATGATTAGGAGTCTGCAAACAAGAGAGTAG

Protein sequence

MFRLAPSSPVGLQTPGTISMFFINGFSRSGLCVFAWLIEMSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLPELQELNAKESKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTMNEMAQLEETRRFHVSLYELVCSTVKYANMNARNELLRAMELRLTALNKDFTASFEKGCNATCSSKEISHLVKFMEHFGATNLKKVIPVCARSSQLCRNCAYKYLELNPKSDSIDPVDDDDDDDSRHTVTSNSLTQVNYGVSPAKVAQVERQDSSESEESDENGTLVERSRTMARSAPPRRSASPMRRVQIGRTGSRRAPAIMIRSLQTRE

Homology

[Close]

BLAST of Carg24462 vs. NCBI nr
Match: XP_022943178.1 (uncharacterized protein LOC111447987 isoform X2 [Cucurbita moschata])

HSP 1 Score: 432.2 bits (1110), Expect = 1.7e-117
Identity = 279/312 (89.42%), Postives = 285/312 (91.35%), Query Frame = 0


Query: 40  MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLPELQELNAKES 99
           MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHL ELQELNAKES
Sbjct: 1   MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKES 60

Query: 100 KASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTMNEMAQLEETRRFHVSLYE 159
           KASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTMNEMAQLEETRRFHVSLY 
Sbjct: 61  KASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTMNEMAQLEETRRFHVSLYG 120

Query: 160 LVCSTVKYANMNARNELLRAMELRLTALNKDFTASFEKGCNATCSSKEISHLVKFMEHFG 219
              +    ++  ++NELLRAMELRLTALNKDFTASFEKGCNATCSSKEISHLVKFMEHFG
Sbjct: 121 QSGAEFT-SSAESKNELLRAMELRLTALNKDFTASFEKGCNATCSSKEISHLVKFMEHFG 180

Query: 220 ATNLKKVIPVCARSSQLCRNCAYKYLELNPKSDSIDPVXXXXXXXXXXTVTSNSLTQVNY 279
           ATNLK              NCAYKYLELNPKSDSIDPVXXXXXXXXXX VTSNSLTQVNY
Sbjct: 181 ATNLK--------------NCAYKYLELNPKSDSIDPVXXXXXXXXXXXVTSNSLTQVNY 240

Query: 280 GVSPAKVAQVERQDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVQIGRTGSRRA 339
           GVSPAKVAQVERQDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVQIGRTGSRRA
Sbjct: 241 GVSPAKVAQVERQDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVQIGRTGSRRA 297

Query: 340 PAIMIRSLQTRE 352
           P IMIRSLQTR+
Sbjct: 301 PVIMIRSLQTRD 297

[Close]

BLAST of Carg24462 vs. NCBI nr
Match: XP_022943177.1 (uncharacterized protein LOC111447987 isoform X1 [Cucurbita moschata])

HSP 1 Score: 432.2 bits (1110), Expect = 1.7e-117
Identity = 279/312 (89.42%), Postives = 285/312 (91.35%), Query Frame = 0


Query: 40  MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLPELQELNAKES 99
           MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHL ELQELNAKES
Sbjct: 1   MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLLELQELNAKES 60

Query: 100 KASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTMNEMAQLEETRRFHVSLYE 159
           KASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTMNEMAQLEETRRFHVSLY 
Sbjct: 61  KASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTMNEMAQLEETRRFHVSLYG 120

Query: 160 LVCSTVKYANMNARNELLRAMELRLTALNKDFTASFEKGCNATCSSKEISHLVKFMEHFG 219
              +    ++  ++NELLRAMELRLTALNKDFTASFEKGCNATCSSKEISHLVKFMEHFG
Sbjct: 121 QSGAEFT-SSAESKNELLRAMELRLTALNKDFTASFEKGCNATCSSKEISHLVKFMEHFG 180

Query: 220 ATNLKKVIPVCARSSQLCRNCAYKYLELNPKSDSIDPVXXXXXXXXXXTVTSNSLTQVNY 279
           ATNLK              NCAYKYLELNPKSDSIDPVXXXXXXXXXX VTSNSLTQVNY
Sbjct: 181 ATNLK--------------NCAYKYLELNPKSDSIDPVXXXXXXXXXXXVTSNSLTQVNY 240

Query: 280 GVSPAKVAQVERQDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVQIGRTGSRRA 339
           GVSPAKVAQVERQDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVQIGRTGSRRA
Sbjct: 241 GVSPAKVAQVERQDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVQIGRTGSRRA 297

Query: 340 PAIMIRSLQTRE 352
           P IMIRSLQTR+
Sbjct: 301 PVIMIRSLQTRD 297

[Close]

BLAST of Carg24462 vs. NCBI nr
Match: XP_022994969.1 (uncharacterized protein LOC111490565 isoform X1 [Cucurbita maxima])

HSP 1 Score: 427.2 bits (1097), Expect = 5.5e-116
Identity = 265/312 (84.94%), Postives = 272/312 (87.18%), Query Frame = 0


Query: 40  MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLPELQELNAKES 99
           MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVD LADGILDTLLPHLPELQELNAKES
Sbjct: 1   MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDALADGILDTLLPHLPELQELNAKES 60

Query: 100 KASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTMNEMAQLEETRRFHVSLYE 159
           KASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTMNEMAQLEETRRFHVSLY 
Sbjct: 61  KASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTMNEMAQLEETRRFHVSLYG 120

Query: 160 LVCSTVKYANMNARNELLRAMELRLTALNKDFTASFEKGCNATCSSKEISHLVKFMEHFG 219
              +    ++  ++NELLRAMELRLTALNKDFTASFEKGCNATCSSK+ISHLVKFMEHFG
Sbjct: 121 QSGAEFT-SSAESKNELLRAMELRLTALNKDFTASFEKGCNATCSSKKISHLVKFMEHFG 180

Query: 220 ATNLKKVIPVCARSSQLCRNCAYKYLELNPKSDSIDPVXXXXXXXXXXTVTSNSLTQVNY 279
           ATNLK              NC  KYLELNPKSDSIDPV          TVTSN  TQVNY
Sbjct: 181 ATNLK--------------NCTCKYLELNPKSDSIDPVPVDDDDDNRHTVTSNLSTQVNY 240

Query: 280 GVSPAKVAQVERQDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVQIGRTGSRRA 339
           GVSPAKVAQVERQDS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVQIGRTGSRRA
Sbjct: 241 GVSPAKVAQVERQDSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVQIGRTGSRRA 297

Query: 340 PAIMIRSLQTRE 352
           PAIMIRSLQTR+
Sbjct: 301 PAIMIRSLQTRD 297

[Close]

BLAST of Carg24462 vs. NCBI nr
Match: XP_022994971.1 (uncharacterized protein LOC111490565 isoform X3 [Cucurbita maxima])

HSP 1 Score: 427.2 bits (1097), Expect = 5.5e-116
Identity = 265/312 (84.94%), Postives = 272/312 (87.18%), Query Frame = 0


Query: 40  MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLPELQELNAKES 99
           MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVD LADGILDTLLPHLPELQELNAKES
Sbjct: 1   MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDALADGILDTLLPHLPELQELNAKES 60

Query: 100 KASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTMNEMAQLEETRRFHVSLYE 159
           KASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTMNEMAQLEETRRFHVSLY 
Sbjct: 61  KASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTMNEMAQLEETRRFHVSLYG 120

Query: 160 LVCSTVKYANMNARNELLRAMELRLTALNKDFTASFEKGCNATCSSKEISHLVKFMEHFG 219
              +    ++  ++NELLRAMELRLTALNKDFTASFEKGCNATCSSK+ISHLVKFMEHFG
Sbjct: 121 QSGAEFT-SSAESKNELLRAMELRLTALNKDFTASFEKGCNATCSSKKISHLVKFMEHFG 180

Query: 220 ATNLKKVIPVCARSSQLCRNCAYKYLELNPKSDSIDPVXXXXXXXXXXTVTSNSLTQVNY 279
           ATNLK              NC  KYLELNPKSDSIDPV          TVTSN  TQVNY
Sbjct: 181 ATNLK--------------NCTCKYLELNPKSDSIDPVPVDDDDDNRHTVTSNLSTQVNY 240

Query: 280 GVSPAKVAQVERQDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVQIGRTGSRRA 339
           GVSPAKVAQVERQDS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVQIGRTGSRRA
Sbjct: 241 GVSPAKVAQVERQDSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVQIGRTGSRRA 297

Query: 340 PAIMIRSLQTRE 352
           PAIMIRSLQTR+
Sbjct: 301 PAIMIRSLQTRD 297

[Close]

BLAST of Carg24462 vs. NCBI nr
Match: XP_022994970.1 (uncharacterized protein LOC111490565 isoform X2 [Cucurbita maxima])

HSP 1 Score: 427.2 bits (1097), Expect = 5.5e-116
Identity = 265/312 (84.94%), Postives = 272/312 (87.18%), Query Frame = 0


Query: 40  MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLPELQELNAKES 99
           MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVD LADGILDTLLPHLPELQELNAKES
Sbjct: 1   MSGGDDDGPLDYATIQIIPSQNRYEAFACCGNKVDALADGILDTLLPHLPELQELNAKES 60

Query: 100 KASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTMNEMAQLEETRRFHVSLYE 159
           KASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTMNEMAQLEETRRFHVSLY 
Sbjct: 61  KASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTMNEMAQLEETRRFHVSLYG 120

Query: 160 LVCSTVKYANMNARNELLRAMELRLTALNKDFTASFEKGCNATCSSKEISHLVKFMEHFG 219
              +    ++  ++NELLRAMELRLTALNKDFTASFEKGCNATCSSK+ISHLVKFMEHFG
Sbjct: 121 QSGAEFT-SSAESKNELLRAMELRLTALNKDFTASFEKGCNATCSSKKISHLVKFMEHFG 180

Query: 220 ATNLKKVIPVCARSSQLCRNCAYKYLELNPKSDSIDPVXXXXXXXXXXTVTSNSLTQVNY 279
           ATNLK              NC  KYLELNPKSDSIDPV          TVTSN  TQVNY
Sbjct: 181 ATNLK--------------NCTCKYLELNPKSDSIDPVPVDDDDDNRHTVTSNLSTQVNY 240

Query: 280 GVSPAKVAQVERQDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVQIGRTGSRRA 339
           GVSPAKVAQVERQDS XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVQIGRTGSRRA
Sbjct: 241 GVSPAKVAQVERQDSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVQIGRTGSRRA 297

Query: 340 PAIMIRSLQTRE 352
           PAIMIRSLQTR+
Sbjct: 301 PAIMIRSLQTRD 297

[Close]

BLAST of Carg24462 vs. TAIR10
Match: AT1G17360.1 (BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TAIR:AT1G72410.1))

HSP 1 Score: 96.3 bits (238), Expect = 4.0e-20
Identity = 65/211 (30.81%), Postives = 107/211 (50.71%), Query Frame = 0


Query: 46  DGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLPELQELNAKESKASIKL 105
           D  LDYA  ++ P  +R E F     + + LA G+++  + HL  ++   +K  ++S++L
Sbjct: 4   DTVLDYAVFELSPKYSRCELFVSSNEEREKLASGLIEPFVNHLRVIESQASKRDQSSVRL 63

Query: 106 QSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTMN-EMAQLEETRRFHVSLYELVCST 165
           +   S  G +WFT+ TL RF+  V SPE+ +   T + EM+QLE  R    +LY      
Sbjct: 64  EVEQSENGESWFTRRTLERFVQYVNSPEVLERVNTFDLEMSQLEAAR----TLYSQDDGG 123

Query: 166 VKYANMNARNELLRAMELRLTALNKDFTASFEKGCNATCSSKEISHLVKFMEHFGATNLK 225
           V  A    + EL+RA++LRL A+ KD T +           + +S L +F + FGA +L 
Sbjct: 124 VADA---TQKELVRAIDLRLEAIKKDLTTAIAHASANGFDPQTVSDLQRFADRFGAHHLN 183

Query: 226 KVIPVCARSSQLCRNCAYKYLELNPKSDSID 256
           +        SQ   +   K +  N ++ S+D
Sbjct: 184 EACSKYISLSQRRPDLITKNVNTNTRT-SVD 206

[Close]

BLAST of Carg24462 vs. TAIR10
Match: AT3G14172.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 94.4 bits (233), Expect = 1.5e-19
Identity = 61/200 (30.50%), Postives = 102/200 (51.00%), Query Frame = 0


Query: 48  PLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLPELQELNAKESKASIKLQS 107
           PLDYA  Q+ P ++R E F       + LA G++   + HL   +E  ++E + SI+L+ 
Sbjct: 6   PLDYAVFQLSPKRSRCELFVSTTGNTEKLASGLVKPFVAHLKVAEEQVSREVQ-SIRLEV 65

Query: 108 PASSAGSAWFTKSTLTRFLHLVGSPELTKITKTMN-EMAQLEETRRFHVSLYELVCSTVK 167
            ++     WFTK TL RF+  V +PE+ ++   ++ EM+QLE  R+ +        S+ K
Sbjct: 66  ESNKNAGTWFTKGTLERFVRFVSTPEVLELVSALDVEMSQLEAARKIYGEGTSDQRSSAK 125

Query: 168 YANMN------ARNELLRAMELRLTALNKDFTASFEKGCNATCSSKEISHLVKFMEHFGA 227
            +          + ELL+A++LRL A+ +D   +  +   A  +   +S L +F + FGA
Sbjct: 126 DSTDTTPAADVTKKELLKAIDLRLAAVRQDLATACNRASAAGFNPITVSELSQFADRFGA 185

Query: 228 TNLK----KVIPVCARSSQL 237
             L     K I +C R  +L
Sbjct: 186 NRLNEACTKFITLCQRRPEL 204

[Close]

BLAST of Carg24462 vs. TAIR10
Match: AT1G72410.2 (COP1-interacting protein-related)

HSP 1 Score: 86.7 bits (213), Expect = 3.2e-17
Identity = 58/182 (31.87%), Postives = 89/182 (48.90%), Query Frame = 0


Query: 46  DGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLPELQELNAKESKASIKL 105
           D  LDY   ++ P  ++ E F     + + LA G++   + HL  L+   +  +++SI+L
Sbjct: 4   DTVLDYVVFELSPKHSKCELFVSSNEQTEKLASGLIQPFVNHLKVLEAKASPVAQSSIRL 63

Query: 106 QSPASSAGSAWFTKSTLTRFLHLVGSPE-LTKITKTMNEMAQLEETRRFHVSLYE---LV 165
           +   S   + WFTK TL RF+  V SPE L K+    +EM QLE  R  +    E     
Sbjct: 64  EVEKS---NTWFTKRTLERFVQFVNSPETLEKVNTYYSEMLQLEAARTLYSQRSEDSKFG 123

Query: 166 CSTVKYANMNARNELLRAMELRLTALNKDFTASFEKGCNATCSSKEISHLVKFMEHFGAT 224
            S    A    + ELL+A++LRL A+ KD T S      +      +S L +F + F A 
Sbjct: 124 ASDDGAAADATKKELLKAIDLRLEAIKKDLTTSISHASASGFDPHTVSELKQFADRFSAH 182

[Close]

BLAST of Carg24462 vs. TAIR10
Match: AT4G27430.1 (COP1-interacting protein 7)

HSP 1 Score: 60.8 bits (146), Expect = 1.9e-09
Identity = 54/214 (25.23%), Postives = 90/214 (42.06%), Query Frame = 0


Query: 49  LDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLPELQELNAKESKASIKLQSP 108
           LDYA  Q+ P++ R +     G + + LA GI    + HL  + +   + SK    +   
Sbjct: 7   LDYALFQLTPTRTRCDLVIFSGGENEKLASGIFQPFVTHLKSVSD---QISKGGYSVTLR 66

Query: 109 ASSAGSAWFTKSTLTRFLHLVGSPELTKITKTM-NEMAQLEETRRFH------------- 168
            SS G  WFTK TL RF+  V +PE+ + + T+  E+ Q+E++ + +             
Sbjct: 67  PSSVGVPWFTKVTLQRFVRFVTTPEVLERSVTLEKEIEQIEDSIQANAAAIAGEAEGNEL 126

Query: 169 ----VSLYELVCSTVK------YANMNARNELLRAMELRLTALNKDFTASFEKGCNATCS 228
                S      S  K          N++  L R +E R  AL K+   ++ +       
Sbjct: 127 GGTWTSQKSTALSKTKGETDGDTVEENSKVGLQRVLENRKAALCKEQAMAYARALVVGFE 186

Query: 229 SKEISHLVKFMEHFGATNLKKVIPVCARSSQLCR 239
              +  L  F + FGA+ L++    C     LC+
Sbjct: 187 LDYMDDLFSFADAFGASRLRE---ACVNFVDLCK 214

[Close]

BLAST of Carg24462 vs. TAIR10
Match: AT5G43310.1 (COP1-interacting protein-related)

HSP 1 Score: 57.0 bits (136), Expect = 2.7e-08
Identity = 32/102 (31.37%), Postives = 53/102 (51.96%), Query Frame = 0


Query: 49  LDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLPELQELNAKESKASIKLQSP 108
           LD    Q+ P++ R +       K + +A G+LD  L HL   ++   K   + I    P
Sbjct: 7   LDSVAFQLTPTRTRCDLLVTANGKTEKIATGLLDPFLAHLKTAKDQLEKGGYSII--LKP 66

Query: 109 ASSAGSAWFTKSTLTRFLHLVGSPELTKITKTM-NEMAQLEE 150
            +S  +AWFTK T+ RF+  V +PE+ +   T+  E+ Q++E
Sbjct: 67  EASDNAAWFTKGTIERFVRFVSTPEVIERVYTLETEIIQIKE 106

[Close]

BLAST of Carg24462 vs. Swiss-Prot
Match: sp|O80386|CIP7_ARATH (COP1-interacting protein 7 OS=Arabidopsis thaliana OX=3702 GN=CIP7 PE=1 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 3.4e-08
Identity = 54/214 (25.23%), Postives = 90/214 (42.06%), Query Frame = 0


Query: 49  LDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLPELQELNAKESKASIKLQSP 108
           LDYA  Q+ P++ R +     G + + LA GI    + HL  + +   + SK    +   
Sbjct: 7   LDYALFQLTPTRTRCDLVIFSGGENEKLASGIFQPFVTHLKSVSD---QISKGGYSVTLR 66

Query: 109 ASSAGSAWFTKSTLTRFLHLVGSPELTKITKTM-NEMAQLEETRRFH------------- 168
            SS G  WFTK TL RF+  V +PE+ + + T+  E+ Q+E++ + +             
Sbjct: 67  PSSVGVPWFTKVTLQRFVRFVTTPEVLERSVTLEKEIEQIEDSIQANAAAIAGEAEGNEL 126

Query: 169 ----VSLYELVCSTVK------YANMNARNELLRAMELRLTALNKDFTASFEKGCNATCS 228
                S      S  K          N++  L R +E R  AL K+   ++ +       
Sbjct: 127 GGTWTSQKSTALSKTKGETDGDTVEENSKVGLQRVLENRKAALCKEQAMAYARALVVGFE 186

Query: 229 SKEISHLVKFMEHFGATNLKKVIPVCARSSQLCR 239
              +  L  F + FGA+ L++    C     LC+
Sbjct: 187 LDYMDDLFSFADAFGASRLRE---ACVNFVDLCK 214

[Close]

BLAST of Carg24462 vs. TrEMBL
Match: tr|A0A0A0KPC7|A0A0A0KPC7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G229140 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 1.4e-80
Identity = 198/353 (56.09%), Postives = 223/353 (63.17%), Query Frame = 0


Query: 40  MSGG-DDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLPELQELNAKE 99
           MSGG  DDG LDYA IQ+IPS+NRYEAF C GN+VD LA+G LDTLL HLPELQELN+K 
Sbjct: 1   MSGGVADDGALDYARIQMIPSENRYEAFVCYGNEVDGLAEGNLDTLLLHLPELQELNSKG 60

Query: 100 SKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTMNEMAQLEETRRFHVSLY 159
           SKASIKLQ  ASS G+ WFTKSTL RFL +VGSPEL  I KTMNEM+QLEET+RFH+SLY
Sbjct: 61  SKASIKLQPSASSGGTTWFTKSTLRRFLQIVGSPELPNIMKTMNEMSQLEETKRFHLSLY 120

Query: 160 --------------ELVCSTVKY-------ANMNARNELLRAMELRLTALNKDFTASFEK 219
                          L  S+ K+       ++  ++N+LLRAM+LRLTALNKD TA+FEK
Sbjct: 121 GQGQMSKTEEKDGCNLDSSSPKHGSGPEFASSAASKNDLLRAMDLRLTALNKDLTAAFEK 180

Query: 220 GCNATCSSKEISHLVKFMEHFGATNLKKVIPVCARSSQLCRNCAYKYLELNPKSDSIDPV 279
              A CSSKEISHL KF EHFGA NLK              NC YKYLELNPKSD+++ V
Sbjct: 181 AHGAACSSKEISHLAKFTEHFGAINLK--------------NCTYKYLELNPKSDNVELV 240

Query: 280 XXXXXXXXXXTV-------------TSNSLTQVNYGVSPAKVAQVERQDS---XXXXXXX 339
                      +              SNS T V YGVSPAKVAQ+ERQDS    XXXXXX
Sbjct: 241 NDDNKYTITSNICNENAISGSIKAEKSNSSTPVKYGVSPAKVAQIERQDSSETEXXXXXX 300

Query: 340 XXXXXXXXXXXXXXXXXXXXXXXXXXRVQIGRTGSRRAPAIMIRS---LQTRE 352
           X                         RVQIGRTGSRRAPAIMIRS   LQTR+
Sbjct: 301 XNGTPAERSRTMVRSTVARRSASPMRRVQIGRTGSRRAPAIMIRSLNHLQTRD 339

[Close]

BLAST of Carg24462 vs. TrEMBL
Match: tr|A0A1S3C5Q2|A0A1S3C5Q2_CUCME (uncharacterized protein LOC103496768 OS=Cucumis melo OX=3656 GN=LOC103496768 PE=4 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 1.8e-78
Identity = 195/354 (55.08%), Postives = 221/354 (62.43%), Query Frame = 0


Query: 40  MSGG-DDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLPELQELNAKE 99
           MSGG  DDGPLDYA IQIIPS+NRYEAF C GN+VD LA+G LD LL HLPELQELNAK 
Sbjct: 1   MSGGVADDGPLDYARIQIIPSENRYEAFVCYGNEVDGLAEGNLDALLLHLPELQELNAKG 60

Query: 100 SKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTMNEMAQLEETRRFHVSLY 159
           SKASIKL   ASS G+ WFTKSTL RFL +VGSPEL  + KT NEM+QLEET+RFH+SLY
Sbjct: 61  SKASIKLLPSASSGGTTWFTKSTLRRFLQIVGSPELPNMMKTRNEMSQLEETKRFHLSLY 120

Query: 160 -------------ELVCSTVKY-------ANMNARNELLRAMELRLTALNKDFTASFEKG 219
                         L  S+ K+       ++  ++N+LLRAM+LRLTALNKD TA+FEK 
Sbjct: 121 GQGQRSKTEEKDGNLDSSSPKHGSGPEFASSAASKNDLLRAMDLRLTALNKDLTAAFEKA 180

Query: 220 CNATCSSKEISHLVKFMEHFGATNLKKVIPVCARSSQLCRNCAYKYLELNPKSDSIDPVX 279
             ATCSSKEIS+L KF E+FGA NLK              NC YKYLELNPKSD+++ V 
Sbjct: 181 HGATCSSKEISNLAKFTEYFGAINLK--------------NCTYKYLELNPKSDNVELVT 240

Query: 280 XXXXXXXXXTV---------------TSNSLTQVNYGVSPAKVAQVERQDS---XXXXXX 339
                     +                SNS T V YGVSPAKVAQ+ERQDS    XXXXX
Sbjct: 241 DDNKHTITSNLCNENAISVNGSIRAEKSNSSTPVKYGVSPAKVAQIERQDSSETEXXXXX 300

Query: 340 XXXXXXXXXXXXXXXXXXXXXXXXXXXRVQIGRTGSRRAPAIMIRS---LQTRE 352
           X                          RVQIGRTGSRRAPAIMIRS   LQTR+
Sbjct: 301 XENGTPAERSRTMVCSTVARRSASPMRRVQIGRTGSRRAPAIMIRSLNHLQTRD 340

[Close]

BLAST of Carg24462 vs. TrEMBL
Match: tr|A0A061FT12|A0A061FT12_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_045601 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 7.0e-51
Identity = 174/352 (49.43%), Postives = 213/352 (60.51%), Query Frame = 0


Query: 40  MSGG-DDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLPELQELNAKE 99
           M GG   D PLDYATIQI+PSQNRYEA+ C  NKV+ LA G+L+ LLPHLP +  L  K 
Sbjct: 1   MDGGIHGDAPLDYATIQILPSQNRYEAYTCHDNKVEKLAVGVLEKLLPHLPGVSNLYTKG 60

Query: 100 SKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTM-NEMAQLEETRRFHVSL 159
             A+ KLQ P +   +AWFTKSTL+RFL +VGS +L    K +  EM+QLEE R+FH+SL
Sbjct: 61  FNANFKLQPPENLKSAAWFTKSTLSRFLDIVGSTDLVDTVKVIEGEMSQLEEARKFHLSL 120

Query: 160 YE--------------------LVCSTVKYANMN---ARNELLRAMELRLTALNKDFTAS 219
           Y                     ++ S  K  N +   ++NELLRAM+ RLTAL  +  A+
Sbjct: 121 YAKGHEDHIESSETDICKSVDVVLASNSKVQNSSSDTSKNELLRAMDSRLTALRSELVAA 180

Query: 220 FEKGCNATCSSKEISHLVKFMEHFGATNLKKVIPVCARSSQLCRNCAYKYLELNPKSDSI 279
           F +    TCS +EI+HL KF E+FGA +LK              N    +LEL+PKS + 
Sbjct: 181 FNQAVGETCSYEEITHLAKFSENFGANDLK--------------NFLCMFLELSPKSQAA 240

Query: 280 DPVXXXXXXXXXXTVTSNSL---------------TQVNYGVSPAKVAQVERQ----DSX 339
           +P           +V  + +               T V YGVSPAKVAQVERQ      X
Sbjct: 241 NPPDDEKSSFSRASVNDSIIKTDGNSQISKPVCAETPVKYGVSPAKVAQVERQXXXXXXX 300

Query: 340 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVQIGRTGSRRAPAIMIRSL 348
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  QIGR+GSRRAPA+ I+SL
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIGRSGSRRAPALTIKSL 338

[Close]

BLAST of Carg24462 vs. TrEMBL
Match: tr|A0A061FTU8|A0A061FTU8_THECC (Uncharacterized protein isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_045601 PE=4 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 7.0e-51
Identity = 174/352 (49.43%), Postives = 213/352 (60.51%), Query Frame = 0


Query: 40  MSGG-DDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLPELQELNAKE 99
           M GG   D PLDYATIQI+PSQNRYEA+ C  NKV+ LA G+L+ LLPHLP +  L  K 
Sbjct: 1   MDGGIHGDAPLDYATIQILPSQNRYEAYTCHDNKVEKLAVGVLEKLLPHLPGVSNLYTKG 60

Query: 100 SKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTM-NEMAQLEETRRFHVSL 159
             A+ KLQ P +   +AWFTKSTL+RFL +VGS +L    K +  EM+QLEE R+FH+SL
Sbjct: 61  FNANFKLQPPENLKSAAWFTKSTLSRFLDIVGSTDLVDTVKVIEGEMSQLEEARKFHLSL 120

Query: 160 YE--------------------LVCSTVKYANMN---ARNELLRAMELRLTALNKDFTAS 219
           Y                     ++ S  K  N +   ++NELLRAM+ RLTAL  +  A+
Sbjct: 121 YAKGHEDHIESSETDICKSVDVVLASNSKVQNSSSDTSKNELLRAMDSRLTALRSELVAA 180

Query: 220 FEKGCNATCSSKEISHLVKFMEHFGATNLKKVIPVCARSSQLCRNCAYKYLELNPKSDSI 279
           F +    TCS +EI+HL KF E+FGA +LK              N    +LEL+PKS + 
Sbjct: 181 FNQAVGETCSYEEITHLAKFSENFGANDLK--------------NFLCMFLELSPKSQAA 240

Query: 280 DPVXXXXXXXXXXTVTSNSL---------------TQVNYGVSPAKVAQVERQ----DSX 339
           +P           +V  + +               T V YGVSPAKVAQVERQ      X
Sbjct: 241 NPPDDEKSSFSRASVNDSIIKTDGNSQISKPVCAETPVKYGVSPAKVAQVERQXXXXXXX 300

Query: 340 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVQIGRTGSRRAPAIMIRSL 348
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  QIGR+GSRRAPA+ I+SL
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIGRSGSRRAPALTIKSL 338

[Close]

BLAST of Carg24462 vs. TrEMBL
Match: tr|A0A061FTD8|A0A061FTD8_THECC (Uncharacterized protein isoform 3 OS=Theobroma cacao OX=3641 GN=TCM_045601 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 9.1e-51
Identity = 175/353 (49.58%), Postives = 214/353 (60.62%), Query Frame = 0


Query: 40  MSGG-DDDGPLDYATIQIIPSQNRYEAFACCGNKVDVLADGILDTLLPHLPELQELNAKE 99
           M GG   D PLDYATIQI+PSQNRYEA+ C  NKV+ LA G+L+ LLPHLP +  L  K 
Sbjct: 1   MDGGIHGDAPLDYATIQILPSQNRYEAYTCHDNKVEKLAVGVLEKLLPHLPGVSNLYTKG 60

Query: 100 SKASIKLQSPASSAGSAWFTKSTLTRFLHLVGSPELTKITKTM-NEMAQLEETRRFHVSL 159
             A+ KLQ P +   +AWFTKSTL+RFL +VGS +L    K +  EM+QLEE R+FH+SL
Sbjct: 61  FNANFKLQPPENLKSAAWFTKSTLSRFLDIVGSTDLVDTVKVIEGEMSQLEEARKFHLSL 120

Query: 160 YEL------------VCSTV---------KYANMN---ARNELLRAMELRLTALNKDFTA 219
           Y              +C +V         K  N +   ++NELLRAM+ RLTAL  +  A
Sbjct: 121 YAKGHEDHIESSETDICKSVDVVLASNQSKVQNSSSDTSKNELLRAMDSRLTALRSELVA 180

Query: 220 SFEKGCNATCSSKEISHLVKFMEHFGATNLKKVIPVCARSSQLCRNCAYKYLELNPKSDS 279
           +F +    TCS +EI+HL KF E+FGA +LK              N    +LEL+PKS +
Sbjct: 181 AFNQAVGETCSYEEITHLAKFSENFGANDLK--------------NFLCMFLELSPKSQA 240

Query: 280 IDPVXXXXXXXXXXTVTSNSL---------------TQVNYGVSPAKVAQVERQ----DS 339
            +P           +V  + +               T V YGVSPAKVAQVERQ      
Sbjct: 241 ANPPDDEKSSFSRASVNDSIIKTDGNSQISKPVCAETPVKYGVSPAKVAQVERQXXXXXX 300

Query: 340 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRVQIGRTGSRRAPAIMIRSL 348
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  QIGR+GSRRAPA+ I+SL
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIGRSGSRRAPALTIKSL 339

The following BLAST results are available for this feature:

BLAST of Carg24462 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943178.1	1.7e-117	89.42	uncharacterized protein LOC111447987 isoform X2 [Cucurbita moschata]	[more]
XP_022943177.1	1.7e-117	89.42	uncharacterized protein LOC111447987 isoform X1 [Cucurbita moschata]	[more]
XP_022994969.1	5.5e-116	84.94	uncharacterized protein LOC111490565 isoform X1 [Cucurbita maxima]	[more]
XP_022994971.1	5.5e-116	84.94	uncharacterized protein LOC111490565 isoform X3 [Cucurbita maxima]	[more]
XP_022994970.1	5.5e-116	84.94	uncharacterized protein LOC111490565 isoform X2 [Cucurbita maxima]	[more]

BLAST of Carg24462 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G17360.1	4.0e-20	30.81	BEST Arabidopsis thaliana protein match is: COP1-interacting protein-related (TA...	[more]
AT3G14172.1	1.5e-19	30.50	FUNCTIONS IN: molecular_function unknown	[more]
AT1G72410.2	3.2e-17	31.87	COP1-interacting protein-related	[more]
AT4G27430.1	1.9e-09	25.23	COP1-interacting protein 7	[more]
AT5G43310.1	2.7e-08	31.37	COP1-interacting protein-related	[more]

BLAST of Carg24462 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O80386\|CIP7_ARATH	3.4e-08	25.23	COP1-interacting protein 7 OS=Arabidopsis thaliana OX=3702 GN=CIP7 PE=1 SV=1	[more]

BLAST of Carg24462 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KPC7\|A0A0A0KPC7_CUCSA	1.4e-80	56.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G229140 PE=4 SV=1	[more]
tr\|A0A1S3C5Q2\|A0A1S3C5Q2_CUCME	1.8e-78	55.08	uncharacterized protein LOC103496768 OS=Cucumis melo OX=3656 GN=LOC103496768 PE=...	[more]
tr\|A0A061FT12\|A0A061FT12_THECC	7.0e-51	49.43	Uncharacterized protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_045601 PE=4 ...	[more]
tr\|A0A061FTU8\|A0A061FTU8_THECC	7.0e-51	49.43	Uncharacterized protein isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_045601 PE=4 ...	[more]
tr\|A0A061FTD8\|A0A061FTD8_THECC	9.1e-51	49.58	Uncharacterized protein isoform 3 OS=Theobroma cacao OX=3641 GN=TCM_045601 PE=4 ...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24462-RA	Carg24462-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 251..351
None	No IPR available	PANTHER	PTHR31008:SF5	SUBFAMILY NOT NAMED	coord: 47..348
None	No IPR available	PANTHER	PTHR31008	COP1-INTERACTING PROTEIN-RELATED	coord: 47..348

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24462	Cla002216	Watermelon (97103) v1	carwmB0910
Carg24462	Csa5G229140	Cucumber (Chinese Long) v2	carcuB0926
Carg24462	MELO3C020181	Melon (DHL92) v3.5.1	carmeB0895
Carg24462	ClCG07G005350	Watermelon (Charleston Gray)	carwcgB0887
Carg24462	CSPI05G11780	Wild cucumber (PI 183967)	carcpiB0947
Carg24462	Cucsa.143720	Cucumber (Gy14) v1	carcgyB1028
Carg24462	CmaCh04G010470	Cucurbita maxima (Rimu)	carcmaB1250
Carg24462	CmaCh04G000920	Cucurbita maxima (Rimu)	carcmaB1249
Carg24462	CmoCh04G011170	Cucurbita moschata (Rifu)	carcmoB1220
Carg24462	CmoCh04G000920	Cucurbita moschata (Rifu)	carcmoB1219
Carg24462	Cp4.1LG01g07120	Cucurbita pepo (Zucchini)	carcpeB1259
Carg24462	CsGy5G009040	Cucumber (Gy14) v2	carcgybB0898
Carg24462	MELO3C020181.2	Melon (DHL92) v3.6.1	carmedB0903
Carg24462	CsaV3_5G011180	Cucumber (Chinese Long) v3	carcucB0948
Carg24462	Cla97C07G133690	Watermelon (97103) v2	carwmbB0953
Carg24462	Bhi07G000390	Wax gourd	carwgoB1053

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg24462	Carg00153	Silver-seed gourd	carcarB570

The following block(s) are covering this gene:

None