Carg24459 (gene) Silver-seed gourd

Overview
NameCarg24459
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUbiquitin-fold modifier 1
LocationCucurbita_argyrosperma_scaffold_353 : 189402 .. 191886 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGGTGCTGGAGGCGGAAAGGTCTCCTTCAAAGTGACCCTCACCTCGGACCCTAAGCTCCCTTTCAAAGTGTTCGTAATCTTAAACCTTTGATCTTTCGTTTTTAGGGTTTTTCTCCCTGTTCAGACTTAAGATCCAATCTTACGGTCTTTCAATTTCCTTGACTCTCAGGTTTAGTGTTCCAGAGGCCGCGCCCTTCACCGCTGTCCTTAAATTTGCCGCTGAAGAATTTAAGGTGCCCCCGCAAACCAGCGCCATCATCACCAATGGTAATTGATTGCCTCCGTGTTGATTTGTTCCTTGAATTTTGATTCGATTGTGATTGGATTCTGCATGCGTGAAATGTCTTTTGTATTTAACAATTTGGGATCGGAAATCGCCGATTCAGGTAGTTCTAGAAACTAGAATTGGTATTGAGTTCCTGGCGCCCACAATAGCACGAAGCGTAAAGGCTTCTGAGAGAAACGAGTATCAGTCATTGTTATTATTGTTATCATTTATGAGTTCAATTGTGAGCCTAGAGATTCAGCCTCTGGGTGGAGGTATATGCCTTAACCTGTTGTGCTAGGCTTTGCCTGGCAGATAGGTTAGTATTAGTTTTAGAGCGCAATTTCTTATTCATCTTACCAAGAAAGTAATTACGTCCTTTCTTTTTGATGAAAAGTTGGGGTTTTCCCCATCAGAAACGTAAACTCTTCTTGAATCCTTCCACATTACTTCATTGATCGCGTGGTGTCAATCTGTATCCAAACCATATAACTATTGCTTATTTGAATTTTATTGCTCTGAAGATTCGAGTGTTAAAAGATCGCCAACAGTACTTGAATATGAGAAAAGTCGAATGTCATCGAACAAACTACTGCACGTTTGGAAATGTATTGGTTATCTTTGATGTTAGTTGAACTTTCCTACATTGTTCTTCATATTTTTTATCTTGTCATGAGATGTGCTAGTGATTCTTTTTTGTATTTTAGGTCAGAGAGATTCCTGTTCATAATAGTTTTTATTGTACTAATATGGAAGCTAAAGTACTTAGGCTTTTCTTCCCAGATAAAGAAAAACCAACACCTTTGAACTTGCAAATAGTTGAGCTTATTTGCAACTGCTGGGTGCTTGAGCTAGCTATTTAGTTGCCTCATGATTTCACTGAAATCTTTCGGAAGAAGGGTCGGAGGTTGTGCTTTAGGATTTGTAAACTATGAGATGTGGACCGTGGTTGTAGGTGTTAGTGTGAGATCACACATCGGTTGGAGAGAAAAACAAAACATTCCTCGTAAGGGTGTGGAAACCTCTCCCTAACATACGCGTTTTAAAAACCGTGAGGTTGATGGCGATACGTAACGGGTTGAAATGGACAATATCTATTAGCGGTGGGGTTGGACTATTACAGTTAGATACTCTTTGCACGATTCTTTTTATGGGGAAAATATCTAAGAATCCGATACAAGCACAACATTTCCCTTGTAGAGACTATTTTACGGGCCATATAACGGTCCTTGGATTCACACTGCACATATGCTTTTAGATGCACTGATATTATCATTTTCGTTTCAGCCATTTAGCCTCTCATTTTAGGTGTTAACATTTGTCGTATGCCTTACAGATGGCGTTGGAATCAACCCTCAGCAAAGTGCTGGTAAGCTAAGTCATGGTTCTATTCTTAAGCTCTACAATTTATTGTCCATTCTTCTGTTCTGCTTATTCTTCTTGTTATTCAAGTTTTCCAACCATAGAAGCATATGCTGAACTGTTTTACGTGGAGAAAAAAAAAAAAAAACAATTGATATATGGATGGGGTAAATAATGTGAGATCCCACGTCGATTGGAGAGGGGAATAGAATACTATTTATAAGGGTGTAGAAACCTCTCCCTAGCAAACACGTTTTAAAAACTTTGAGAGGAGCTCGAAAGGGAAGCTCAAAGAGGACAATATTTTTCTAGCAGTGAGCTTGGGCTGTTATAGATATTGGTGTTTCATGAGCCAAAGGCACCGCCATTGCCCGAAAGCTAAAACATAACAATTGATGTTTTCTTCTTTAACGCCCATCGCAAATGTTAAGAACCTTACCTTTGAAACTCGAAATCAGATTGTTTTTTTCTTTTATTCTTCCCGGATTACATCCTGCGCCGGGTGCTTCCTCAAGCATGAGATACATTTTGTGTTTGTTCTAAATTTTAACATATTGGTCGATATTGCCATAAACTTTTACATATTCCTACTGCCAAACAGCCTACAATTGTGGCCATAATATTCCATTTGAAGCTGAAATTTATGGTTGATGTGCTTTTTGCAGGCAATGTCTTCCTCAAGCACGGCTCTGAACTACGCCTGATTCCTCGTGATAGAGTCGGAGCTGCTGGATCTATGAGAATGTAAACTACAATACTCGCCTTAGTCAACTGGCTCCACACTTTTTTTTATCACATTACTGCAATTGATGAGATGAGAACCAATGTCTGCTTATCCTTTCGATTTCACTAG

mRNA sequence

ATGGCGGGTGCTGGAGGCGGAAAGGTCTCCTTCAAAGTGACCCTCACCTCGGACCCTAAGCTCCCTTTCAAAGTGTTTAGTGTTCCAGAGGCCGCGCCCTTCACCGCTGTCCTTAAATTTGCCGCTGAAGAATTTAAGGTGCCCCCGCAAACCAGCGCCATCATCACCAATGATGGCGTTGGAATCAACCCTCAGCAAAGTGCTGGCAATGTCTTCCTCAAGCACGGCTCTGAACTACGCCTGATTCCTCGTGATAGAGTCGGAGCTGCTGGATCTATGAGAATGTAAACTACAATACTCGCCTTAGTCAACTGGCTCCACACTTTTTTTTATCACATTACTGCAATTGATGAGATGAGAACCAATGTCTGCTTATCCTTTCGATTTCACTAG

Coding sequence (CDS)

ATGGCGGGTGCTGGAGGCGGAAAGGTCTCCTTCAAAGTGACCCTCACCTCGGACCCTAAGCTCCCTTTCAAAGTGTTTAGTGTTCCAGAGGCCGCGCCCTTCACCGCTGTCCTTAAATTTGCCGCTGAAGAATTTAAGGTGCCCCCGCAAACCAGCGCCATCATCACCAATGATGGCGTTGGAATCAACCCTCAGCAAAGTGCTGGCAATGTCTTCCTCAAGCACGGCTCTGAACTACGCCTGATTCCTCGTGATAGAGTCGGAGCTGCTGGATCTATGAGAATGTAA

Protein sequence

MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMRM
Homology
[Close]
BLAST of Carg24459 vs. NCBI nr
Match: XP_023547732.1 (ubiquitin-fold modifier 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 188.7 bits (478), Expect = 8.9e-45
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60
          MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV
Sbjct: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60

Query: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMRM 96
          GINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMRM
Sbjct: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMRM 95

[Close]
BLAST of Carg24459 vs. NCBI nr
Match: XP_022141697.1 (ubiquitin-fold modifier 1 [Momordica charantia])

HSP 1 Score: 185.3 bits (469), Expect = 9.9e-44
Identity = 92/95 (96.84%), Postives = 95/95 (100.00%), Query Frame = 0 

Query: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60
          MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV
Sbjct: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60

Query: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGAAGSMRM 96
          GINPQQSAGNVFLKHGSELRLIPRDRVGA+G++RM
Sbjct: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGASGALRM 95

[Close]
BLAST of Carg24459 vs. NCBI nr
Match: XP_022990075.1 (ubiquitin-fold modifier 1-like [Cucurbita maxima])

HSP 1 Score: 179.9 bits (455), Expect = 4.1e-42
Identity = 90/91 (98.90%), Postives = 90/91 (98.90%), Query Frame = 0 

Query: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60
          MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV
Sbjct: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60

Query: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGAAG 92
          GINPQQSAGNVFLKHGSELRLIPRDRVGA G
Sbjct: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGATG 91

[Close]
BLAST of Carg24459 vs. NCBI nr
Match: XP_004140331.1 (PREDICTED: ubiquitin-fold modifier 1 [Cucumis sativus] >XP_008465795.1 PREDICTED: ubiquitin-fold modifier 1 [Cucumis melo] >XP_022939161.1 ubiquitin-fold modifier 1 [Cucurbita moschata] >XP_022993821.1 ubiquitin-fold modifier 1 [Cucurbita maxima] >XP_023550471.1 ubiquitin-fold modifier 1 [Cucurbita pepo subsp. pepo] >KGN50966.1 hypothetical protein Csa_5G374760 [Cucumis sativus])

HSP 1 Score: 179.1 bits (453), Expect = 7.1e-42
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0 

Query: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60
          MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV
Sbjct: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60

Query: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGAA 91
          GINPQQSAGNVFLKHGSELRLIPRDRVGAA
Sbjct: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGAA 90

[Close]
BLAST of Carg24459 vs. NCBI nr
Match: XP_008378491.1 (PREDICTED: ubiquitin-fold modifier 1 [Malus domestica] >XP_008365862.1 PREDICTED: ubiquitin-fold modifier 1 [Malus domestica] >XP_009366979.1 PREDICTED: ubiquitin-fold modifier 1 [Pyrus x bretschneideri] >XP_009367297.1 PREDICTED: ubiquitin-fold modifier 1 [Pyrus x bretschneideri] >XP_009341669.1 PREDICTED: ubiquitin-fold modifier 1 [Pyrus x bretschneideri])

HSP 1 Score: 176.0 bits (445), Expect = 6.0e-41
Identity = 88/90 (97.78%), Postives = 89/90 (98.89%), Query Frame = 0 

Query: 4  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGIN 63
          AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGIN
Sbjct: 2  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGIN 61

Query: 64 PQQSAGNVFLKHGSELRLIPRDRVGAAGSM 94
          PQQSAGNVFLKHGSELRLIPRDRVGA G+M
Sbjct: 62 PQQSAGNVFLKHGSELRLIPRDRVGAFGTM 91

[Close]
BLAST of Carg24459 vs. TAIR10
Match: AT1G77710.1 (Ubiquitin-like, Ufm1 (InterPro:IPR005375))

HSP 1 Score: 166.8 bits (421), Expect = 6.6e-42
Identity = 83/86 (96.51%), Postives = 84/86 (97.67%), Query Frame = 0 

Query: 4  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGIN 63
          A GGKVSFKVTLTSDPKLPFKVFSVPE APFTAVLKFAAEEFKVPPQTSAIITNDG+GIN
Sbjct: 2  ATGGKVSFKVTLTSDPKLPFKVFSVPEGAPFTAVLKFAAEEFKVPPQTSAIITNDGIGIN 61

Query: 64 PQQSAGNVFLKHGSELRLIPRDRVGA 90
          PQQSAGNVFLKHGSELRLIPRDRVGA
Sbjct: 62 PQQSAGNVFLKHGSELRLIPRDRVGA 87

[Close]
BLAST of Carg24459 vs. Swiss-Prot
Match: sp|Q9CA23|UFM1_ARATH (Ubiquitin-fold modifier 1 OS=Arabidopsis thaliana OX=3702 GN=At1g77710 PE=3 SV=1)

HSP 1 Score: 166.8 bits (421), Expect = 1.2e-40
Identity = 83/86 (96.51%), Postives = 84/86 (97.67%), Query Frame = 0 

Query: 4  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGIN 63
          A GGKVSFKVTLTSDPKLPFKVFSVPE APFTAVLKFAAEEFKVPPQTSAIITNDG+GIN
Sbjct: 2  ATGGKVSFKVTLTSDPKLPFKVFSVPEGAPFTAVLKFAAEEFKVPPQTSAIITNDGIGIN 61

Query: 64 PQQSAGNVFLKHGSELRLIPRDRVGA 90
          PQQSAGNVFLKHGSELRLIPRDRVGA
Sbjct: 62 PQQSAGNVFLKHGSELRLIPRDRVGA 87

[Close]
BLAST of Carg24459 vs. Swiss-Prot
Match: sp|Q94DM8|UFM1_ORYSJ (Ubiquitin-fold modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0962400 PE=3 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 5.0e-39
Identity = 80/82 (97.56%), Postives = 81/82 (98.78%), Query Frame = 0 

Query: 8  KVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQS 67
          KVSFK+ LTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQS
Sbjct: 16 KVSFKIILTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQS 75

Query: 68 AGNVFLKHGSELRLIPRDRVGA 90
          AGNVFLKHGSELRLIPRDRVGA
Sbjct: 76 AGNVFLKHGSELRLIPRDRVGA 97

[Close]
BLAST of Carg24459 vs. Swiss-Prot
Match: sp|Q5PU89|UFM1_CHLIN (Ubiquitin-fold modifier 1 OS=Chlamydomonas incerta OX=51695 GN=PR46a PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 4.7e-37
Identity = 78/90 (86.67%), Postives = 82/90 (91.11%), Query Frame = 0 

Query: 5  GGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINP 64
          G  KV+FKVTLTSDPKLPF+VFSVPE APFTAVLKFAAEEFKVP QTSAIITNDGVGINP
Sbjct: 10 GVTKVTFKVTLTSDPKLPFRVFSVPEEAPFTAVLKFAAEEFKVPAQTSAIITNDGVGINP 69

Query: 65 QQSAGNVFLKHGSELRLIPRDRVGAAGSMR 95
          QQ+AGNVFLKHGSELRLIPRDRVG +   R
Sbjct: 70 QQTAGNVFLKHGSELRLIPRDRVGGSSLAR 99

[Close]
BLAST of Carg24459 vs. Swiss-Prot
Match: sp|Q94EY2|UFM1_CHLRE (Ubiquitin-fold modifier 1 OS=Chlamydomonas reinhardtii OX=3055 GN=PR46a PE=3 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 1.0e-36
Identity = 77/87 (88.51%), Postives = 79/87 (90.80%), Query Frame = 0 

Query: 8  KVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQS 67
          KV+FKVTLTSDPKLPF+VFSVPE APFTAVLKFAAEEFKVP QTSAIITNDGVGINPQQ 
Sbjct: 10 KVTFKVTLTSDPKLPFRVFSVPEEAPFTAVLKFAAEEFKVPAQTSAIITNDGVGINPQQI 69

Query: 68 AGNVFLKHGSELRLIPRDRVGAAGSMR 95
          AGNVFLKHGSELRLIPRDRVG     R
Sbjct: 70 AGNVFLKHGSELRLIPRDRVGGISRAR 96

[Close]
BLAST of Carg24459 vs. Swiss-Prot
Match: sp|Q176V0|UFM1_AEDAE (Ubiquitin-fold modifier 1 OS=Aedes aegypti OX=7159 GN=AAEL006251 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 4.0e-36
Identity = 73/82 (89.02%), Postives = 79/82 (96.34%), Query Frame = 0 

Query: 8  KVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGINPQQS 67
          KV+FK+TLTSDPKLPFKV SVPEA PFTAVLKFAAEEFKVPP TSAIIT+DG+GINPQQ+
Sbjct: 4  KVTFKITLTSDPKLPFKVLSVPEATPFTAVLKFAAEEFKVPPATSAIITDDGIGINPQQT 63

Query: 68 AGNVFLKHGSELRLIPRDRVGA 90
          AGNVFLKHGSELRLIPRDRVG+
Sbjct: 64 AGNVFLKHGSELRLIPRDRVGS 85

[Close]
BLAST of Carg24459 vs. TrEMBL
Match: tr|A0A1S3CPQ1|A0A1S3CPQ1_CUCME (Ubiquitin-fold modifier 1 OS=Cucumis melo OX=3656 GN=LOC103503394 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 4.7e-42
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0 

Query: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60
          MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV
Sbjct: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60

Query: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGAA 91
          GINPQQSAGNVFLKHGSELRLIPRDRVGAA
Sbjct: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGAA 90

[Close]
BLAST of Carg24459 vs. TrEMBL
Match: tr|A0A0A0KTD7|A0A0A0KTD7_CUCSA (Ubiquitin-fold modifier 1 OS=Cucumis sativus OX=3659 GN=Csa_5G374760 PE=3 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 4.7e-42
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0 

Query: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60
          MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV
Sbjct: 1  MAGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGV 60

Query: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGAA 91
          GINPQQSAGNVFLKHGSELRLIPRDRVGAA
Sbjct: 61 GINPQQSAGNVFLKHGSELRLIPRDRVGAA 90

[Close]
BLAST of Carg24459 vs. TrEMBL
Match: tr|A0A2P2IYL2|A0A2P2IYL2_RHIMU (Ubiquitin-fold modifier 1 OS=Rhizophora mucronata OX=61149 PE=3 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.3e-41
Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 0 

Query: 3  GAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGI 62
          GAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGI
Sbjct: 5  GAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGI 64

Query: 63 NPQQSAGNVFLKHGSELRLIPRDRVGAAG 92
          NPQQSAGNVFLKHGSELRLIPRDRVGA+G
Sbjct: 65 NPQQSAGNVFLKHGSELRLIPRDRVGASG 93

[Close]
BLAST of Carg24459 vs. TrEMBL
Match: tr|A0A1U8GN52|A0A1U8GN52_CAPAN (Ubiquitin-fold modifier 1 OS=Capsicum annuum OX=4072 GN=LOC107870609 PE=3 SV=1)

HSP 1 Score: 175.6 bits (444), Expect = 5.2e-41
Identity = 87/90 (96.67%), Postives = 89/90 (98.89%), Query Frame = 0 

Query: 2  AGAGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVG 61
          +G GGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVG
Sbjct: 3  SGGGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVG 62

Query: 62 INPQQSAGNVFLKHGSELRLIPRDRVGAAG 92
          INPQQSAGNVFLKHGSELRLIPRDRVGA+G
Sbjct: 63 INPQQSAGNVFLKHGSELRLIPRDRVGASG 92

[Close]
BLAST of Carg24459 vs. TrEMBL
Match: tr|A0A2P5E5N5|A0A2P5E5N5_9ROSA (Ubiquitin-fold modifier 1 OS=Trema orientalis OX=63057 GN=TorRG33x02_233380 PE=3 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.2e-40
Identity = 87/91 (95.60%), Postives = 89/91 (97.80%), Query Frame = 0 

Query: 4  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGIN 63
          AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGIN
Sbjct: 2  AGGGKVSFKVTLTSDPKLPFKVFSVPEAAPFTAVLKFAAEEFKVPPQTSAIITNDGVGIN 61

Query: 64 PQQSAGNVFLKHGSELRLIPRDRVGAAGSMR 95
          PQQSAGNVFLKHGSELRLIPRDRVGA G+ +
Sbjct: 62 PQQSAGNVFLKHGSELRLIPRDRVGAFGTFK 92

The following BLAST results are available for this feature:
BLAST of Carg24459 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023547732.18.9e-45100.00ubiquitin-fold modifier 1-like [Cucurbita pepo subsp. pepo][more]
XP_022141697.19.9e-4496.84ubiquitin-fold modifier 1 [Momordica charantia][more]
XP_022990075.14.1e-4298.90ubiquitin-fold modifier 1-like [Cucurbita maxima][more]
XP_004140331.17.1e-42100.00PREDICTED: ubiquitin-fold modifier 1 [Cucumis sativus] >XP_008465795.1 PREDICTED... [more]
XP_008378491.16.0e-4197.78PREDICTED: ubiquitin-fold modifier 1 [Malus domestica] >XP_008365862.1 PREDICTED... [more]
BLAST of Carg24459 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G77710.16.6e-4296.51Ubiquitin-like, Ufm1 (InterPro:IPR005375)[more]
BLAST of Carg24459 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9CA23|UFM1_ARATH1.2e-4096.51Ubiquitin-fold modifier 1 OS=Arabidopsis thaliana OX=3702 GN=At1g77710 PE=3 SV=1[more]
sp|Q94DM8|UFM1_ORYSJ5.0e-3997.56Ubiquitin-fold modifier 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g09624... [more]
sp|Q5PU89|UFM1_CHLIN4.7e-3786.67Ubiquitin-fold modifier 1 OS=Chlamydomonas incerta OX=51695 GN=PR46a PE=3 SV=1[more]
sp|Q94EY2|UFM1_CHLRE1.0e-3688.51Ubiquitin-fold modifier 1 OS=Chlamydomonas reinhardtii OX=3055 GN=PR46a PE=3 SV=... [more]
sp|Q176V0|UFM1_AEDAE4.0e-3689.02Ubiquitin-fold modifier 1 OS=Aedes aegypti OX=7159 GN=AAEL006251 PE=3 SV=1[more]
BLAST of Carg24459 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3CPQ1|A0A1S3CPQ1_CUCME4.7e-42100.00Ubiquitin-fold modifier 1 OS=Cucumis melo OX=3656 GN=LOC103503394 PE=3 SV=1[more]
tr|A0A0A0KTD7|A0A0A0KTD7_CUCSA4.7e-42100.00Ubiquitin-fold modifier 1 OS=Cucumis sativus OX=3659 GN=Csa_5G374760 PE=3 SV=1[more]
tr|A0A2P2IYL2|A0A2P2IYL2_RHIMU2.3e-4198.88Ubiquitin-fold modifier 1 OS=Rhizophora mucronata OX=61149 PE=3 SV=1[more]
tr|A0A1U8GN52|A0A1U8GN52_CAPAN5.2e-4196.67Ubiquitin-fold modifier 1 OS=Capsicum annuum OX=4072 GN=LOC107870609 PE=3 SV=1[more]
tr|A0A2P5E5N5|A0A2P5E5N5_9ROSA1.2e-4095.60Ubiquitin-fold modifier 1 OS=Trema orientalis OX=63057 GN=TorRG33x02_233380 PE=3... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR029071Ubiquitin-like_domsf
IPR005375UFM1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24459-RACarg24459-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 93..95
NoneNo IPR availableGENE3DG3DSA:3.10.20.90coord: 1..89
e-value: 9.2E-49
score: 165.5
NoneNo IPR availablePANTHERPTHR15825:SF1UBIQUITIN-FOLD MODIFIER 1coord: 2..90
IPR005375Ubiquitin-fold modifier 1PIRSFPIRSF038027Ufm1coord: 1..90
e-value: 3.3E-47
score: 156.4
IPR005375Ubiquitin-fold modifier 1PFAMPF03671Ufm1coord: 8..82
e-value: 5.7E-43
score: 144.8
IPR005375Ubiquitin-fold modifier 1PANTHERPTHR15825FAMILY NOT NAMEDcoord: 2..90
IPR005375Ubiquitin-fold modifier 1CDDcd01766Ufm1coord: 7..88
e-value: 3.10761E-54
score: 164.81
IPR029071Ubiquitin-like domain superfamilySUPERFAMILYSSF54236Ubiquitin-likecoord: 5..88

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg24459CmaCh15G006980Cucurbita maxima (Rimu)carcmaB0620
Carg24459CmoCh15G007140Cucurbita moschata (Rifu)carcmoB0603
Carg24459CmoCh04G024510Cucurbita moschata (Rifu)carcmoB0604
Carg24459Cp4.1LG13g04700Cucurbita pepo (Zucchini)carcpeB0626
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg24459Carg01509Silver-seed gourdcarcarB451
The following block(s) are covering this gene:
GeneOrganismBlock
Carg24459Cucurbita maxima (Rimu)carcmaB0621
Carg24459Cucurbita pepo (Zucchini)carcpeB0627