Carg24439 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24439
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	chlorophyllide a oxygenase, chloroplastic
Location	Cucurbita_argyrosperma_scaffold_353 : 81755 .. 83847 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACCGTCGTAGCAACGGCTGCAGCTCTCTCGTTGCCGATCTCATTTTCTAAATCTCCGAAGTTCAATTTCAAGAAGGTGCGTGTTTCTTTTTCCTTCCCTGATTTGGTCGTTTGTATCTTGGTATCGATTTCTGTTCGTGGAAAAGAAGATCGAGAGTTCATTTTGGTCATTTCAATGTACATTTTGCTGGTAATTTTGCTGCAAGTATCTTACGGAGTTTATTGAGCTTAGTTTTTGTATCTCTTTTGATTACCGAACTTTGTGGCTGTTTTCTGTTCATACTTGTGGTCACTTGCTTTAGTTGCTGTAGAAGGAGCGTTTAGGTGAGTAGTGGAATAAATTAACGAATTGGATGGGCGTCTGCTACCTAGCTGTTTGATGTAGTGTTTCTGTTAAACTGTGGCGTGGATTGTTGGCCCTGTGGTTGTAGATTTTTGGCTCCATTTCTATGTTGTTGAGATTCATTTGAATGTATGGTTTGATGTTGTGGAATGTTGAATTTTCAGAGTGTGAAAGTTGGATTTAGAGTGTTTGCTGTGTTTGGAGAGGAGGGGGCTATAGAGAGGAAGAGTGGTTGGCAGACGCTCTTTGACGTAGAAGATCCAAGGACAAAAGTTCCTCAATCTAAAGGGAAATTCTTAGATGCTAACCAAGCTCTGGAAGTGGCCAGAAATGATATTCAATACTGTGATTGGCGAGCTCGGCAAGATGTTCTTACAATCATGCACCTCCATGAGAAGGTTCCTCCAATCTCATGCTACTTCATTTGTTTGTTTTTAACATTCCTTTCATTTCATACTTCTATGGTTCCTTTTTGCCATCCTCCTCGTACTTCATTTAGTTGGTTTATCTTACATCAAATTGCCTTTAGGCTAATGAAGCTGTGCAACTTGTTGATCCATCTTCTCGAAACATGTTTTATGCTGAAAATTTGTTGCTTAAATACCGGTTTAGGTTGTGGAAGTCCTAAATCCCCTAGCCCGGAACTACAAGTCTATTGGAACAATGAAAAAGGAGCTTGCTGAATTACAGGGGGAATTGGCAGAAGCTCACAAACAGGTCTGTAAAGTTTCTAGTTAGTTCTTGTCACTAAATTTCCTAAAACGTAGTTAGCTTAGTTCATCAAGAAGAAGATGGGTCAATGACATTTAGTTGTTGGATCTTCAACCTGGTGAGGTGATTATTCTCCTGTCTATAATATTATCATGTTTGACCACCTATGAACAACAACAGGTTCATAAATCTGAAGCACGGGTTAGCACTGCCTTAGATAAACTAGCTTATATGGAAGAATTGGTGCATGATAGGCTGTTACAAGACAGAAACACAGCGGAATTGGATAGCCCATCTACCTCGCCCGGTACCTCAAGACAATCTCATGATTCCATAACTAGAAGATCGCCAAAGAAAAGCTTAAATGTATCAGGACCTGTCGAACCGTATCATCCCCGATTGAAGAACTTCTGGTATCCTGTTGCTTTCTCCAGTGATCTGAGAGATGACACAATGGTAGGGTAATTCTATGGATCGCCTCGTCCAATATCCTTTAGATTCAACTGTACGTTGGGTGCCCTCTTACTGATTCATCATCTATTTCAGATCCCATTTGATTGTTTTGAAGAACCATGGGTTCTTTTCCGTGGAAAGGATGGCAATCCTGGATGCATACGAAACACATGTGCCCATAGGGCATGCCCTCTTCACCTCGGTTCTGTCAACGATGGTCGAGTCCAGTGTCCTTACCATGGTTGGTGTTGAATAAAAGAAATATGGACTAAAATCTCAAATTCTTGTATTGATAAAAACAGTAATTAAGAGAAATAATCTCTAAGGGTTGGTTTCATTTGTTGAAAATTTCAGGTTGGGAATACTCAACGGATGGCAAATGTGAGAAAATGCCATCGACGCGACTACTAAATGTGAAAATAAAATCGTTGCCATGCTTCGAGAAAGAAGGAATGATCTGGGTTTGGCCAGGTAATGATCCTCCAGCAGCTAATCTTCCTTCACTCCAACCTCCTCCTGGTTTTCAAATCCATGCTGAGGTAATTGTTAGAAACATTCTGTTCCTTTTAGCAGTTGAGTTATAA

mRNA sequence

ATGACCGTCGTAGCAACGGCTGCAGCTCTCTCGTTGCCGATCTCATTTTCTAAATCTCCGAAGTTCAATTTCAAGAAGGTGCGTGTTTCTTTTTCCTTCCCTGATTTGGTCGTTTGTATCTTGGTATCGATTTCTGTTCGTGGAAAAGAAGATCGAGAGTTCATTTTGGTCATTTCAATGTACATTTTGCTGAGTGTGAAAGTTGGATTTAGAGTGTTTGCTGTGTTTGGAGAGGAGGGGGCTATAGAGAGGAAGAGTGGTTGGCAGACGCTCTTTGACGTAGAAGATCCAAGGACAAAAGTTCCTCAATCTAAAGGGAAATTCTTAGATGCTAACCAAGCTCTGGAAGTGGCCAGAAATGATATTCAATACTGTGATTGGCGAGCTCGGCAAGATGTTCTTACAATCATGCACCTCCATGAGAAGGTTGTGGAAGTCCTAAATCCCCTAGCCCGGAACTACAAGTCTATTGGAACAATGAAAAAGGAGCTTGCTGAATTACAGGGGGAATTGGCAGAAGCTCACAAACAGGTTCATAAATCTGAAGCACGGGTTAGCACTGCCTTAGATAAACTAGCTTATATGGAAGAATTGGTGCATGATAGGCTGTTACAAGACAGAAACACAGCGGAATTGGATAGCCCATCTACCTCGCCCGGTACCTCAAGACAATCTCATGATTCCATAACTAGAAGATCGCCAAAGAAAAGCTTAAATGTATCAGGACCTGTCGAACCGTATCATCCCCGATTGAAGAACTTCTGGTATCCTGTTGCTTTCTCCAGTGATCTGAGAGATGACACAATGATCCCATTTGATTGTTTTGAAGAACCATGGGTTCTTTTCCGTGGAAAGGATGGCAATCCTGGATGCATACGAAACACATGTGCCCATAGGGCATGCCCTCTTCACCTCGGTTCTGTCAACGATGGTCGAGTCCAGTGTCCTTACCATGGTTGGGAATACTCAACGGATGGCAAATGTGAGAAAATGCCATCGACGCGACTACTAAATGTGAAAATAAAATCGTTGCCATGCTTCGAGAAAGAAGGAATGATCTGGGTTTGGCCAGGTAATGATCCTCCAGCAGCTAATCTTCCTTCACTCCAACCTCCTCCTGGTTTTCAAATCCATGCTGAGGTAATTGTTAGAAACATTCTGTTCCTTTTAGCAGTTGAGTTATAA

Coding sequence (CDS)

ATGACCGTCGTAGCAACGGCTGCAGCTCTCTCGTTGCCGATCTCATTTTCTAAATCTCCGAAGTTCAATTTCAAGAAGGTGCGTGTTTCTTTTTCCTTCCCTGATTTGGTCGTTTGTATCTTGGTATCGATTTCTGTTCGTGGAAAAGAAGATCGAGAGTTCATTTTGGTCATTTCAATGTACATTTTGCTGAGTGTGAAAGTTGGATTTAGAGTGTTTGCTGTGTTTGGAGAGGAGGGGGCTATAGAGAGGAAGAGTGGTTGGCAGACGCTCTTTGACGTAGAAGATCCAAGGACAAAAGTTCCTCAATCTAAAGGGAAATTCTTAGATGCTAACCAAGCTCTGGAAGTGGCCAGAAATGATATTCAATACTGTGATTGGCGAGCTCGGCAAGATGTTCTTACAATCATGCACCTCCATGAGAAGGTTGTGGAAGTCCTAAATCCCCTAGCCCGGAACTACAAGTCTATTGGAACAATGAAAAAGGAGCTTGCTGAATTACAGGGGGAATTGGCAGAAGCTCACAAACAGGTTCATAAATCTGAAGCACGGGTTAGCACTGCCTTAGATAAACTAGCTTATATGGAAGAATTGGTGCATGATAGGCTGTTACAAGACAGAAACACAGCGGAATTGGATAGCCCATCTACCTCGCCCGGTACCTCAAGACAATCTCATGATTCCATAACTAGAAGATCGCCAAAGAAAAGCTTAAATGTATCAGGACCTGTCGAACCGTATCATCCCCGATTGAAGAACTTCTGGTATCCTGTTGCTTTCTCCAGTGATCTGAGAGATGACACAATGATCCCATTTGATTGTTTTGAAGAACCATGGGTTCTTTTCCGTGGAAAGGATGGCAATCCTGGATGCATACGAAACACATGTGCCCATAGGGCATGCCCTCTTCACCTCGGTTCTGTCAACGATGGTCGAGTCCAGTGTCCTTACCATGGTTGGGAATACTCAACGGATGGCAAATGTGAGAAAATGCCATCGACGCGACTACTAAATGTGAAAATAAAATCGTTGCCATGCTTCGAGAAAGAAGGAATGATCTGGGTTTGGCCAGGTAATGATCCTCCAGCAGCTAATCTTCCTTCACTCCAACCTCCTCCTGGTTTTCAAATCCATGCTGAGGTAATTGTTAGAAACATTCTGTTCCTTTTAGCAGTTGAGTTATAA

Protein sequence

MTVVATAAALSLPISFSKSPKFNFKKVRVSFSFPDLVVCILVSISVRGKEDREFILVISMYILLSVKVGFRVFAVFGEEGAIERKSGWQTLFDVEDPRTKVPQSKGKFLDANQALEVARNDIQYCDWRARQDVLTIMHLHEKVVEVLNPLARNYKSIGTMKKELAELQGELAEAHKQVHKSEARVSTALDKLAYMEELVHDRLLQDRNTAELDSPSTSPGTSRQSHDSITRRSPKKSLNVSGPVEPYHPRLKNFWYPVAFSSDLRDDTMIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRACPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGNDPPAANLPSLQPPPGFQIHAEVIVRNILFLLAVEL

Homology

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BLAST of Carg24439 vs. NCBI nr
Match: XP_023541912.1 (chlorophyllide a oxygenase, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 693.7 bits (1789), Expect = 3.5e-196
Identity = 340/383 (88.77%), Postives = 344/383 (89.82%), Query Frame = 0


Query: 1   MTVVATAAALSLPISFSKSPKFNFKKVRVSFSFPDLVVCILVSISVRGKEDREFILVISM 60
           MTVVATAAALSLPISFSKSPKFNFKK                                  
Sbjct: 1   MTVVATAAALSLPISFSKSPKFNFKK---------------------------------- 60

Query: 61  YILLSVKVGFRVFAVFGEEGAIERKSGWQTLFDVEDPRTKVPQSKGKFLDANQALEVARN 120
               SVKVGFRVFAVFGEEGAIERKSGWQTLFDVEDPRTKVPQSKGKFLDANQALEVARN
Sbjct: 61  ----SVKVGFRVFAVFGEEGAIERKSGWQTLFDVEDPRTKVPQSKGKFLDANQALEVARN 120

Query: 121 DIQYCDWRARQDVLTIMHLHEKVVEVLNPLARNYKSIGTMKKELAELQGELAEAHKQVHK 180
           DIQYCDWRARQDVLTIMHLHEKVVEVLNPLARNYKSIGTMKKELAELQGELAEAHKQVHK
Sbjct: 121 DIQYCDWRARQDVLTIMHLHEKVVEVLNPLARNYKSIGTMKKELAELQGELAEAHKQVHK 180

Query: 181 SEARVSTALDKLAYMEELVHDRLLQDRNTAELDSPSTSPGTSRQSHDSITRRSPKKSLNV 240
           SEARVSTALDKLAYMEELVHDRLLQDRNTAELDSPSTSPGTS QSHDSITRRSPK+SLNV
Sbjct: 181 SEARVSTALDKLAYMEELVHDRLLQDRNTAELDSPSTSPGTSTQSHDSITRRSPKRSLNV 240

Query: 241 SGPVEPYHPRLKNFWYPVAFSSDLRDDTMIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRA 300
           SGPVEPYHPRLKNFWYPVAFSSDLRDDTMIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRA
Sbjct: 241 SGPVEPYHPRLKNFWYPVAFSSDLRDDTMIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRA 300

Query: 301 CPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGND 360
           CPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGND
Sbjct: 301 CPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGND 345

Query: 361 PPAANLPSLQPPPGFQIHAEVIV 384
           PPAANLPSLQPPPGFQIHAE+++
Sbjct: 361 PPAANLPSLQPPPGFQIHAELVI 345

[Close]

BLAST of Carg24439 vs. NCBI nr
Match: XP_022962444.1 (chlorophyllide a oxygenase, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 693.0 bits (1787), Expect = 6.0e-196
Identity = 340/383 (88.77%), Postives = 343/383 (89.56%), Query Frame = 0


Query: 1   MTVVATAAALSLPISFSKSPKFNFKKVRVSFSFPDLVVCILVSISVRGKEDREFILVISM 60
           MTVVATAAALSLPISFSKSPKFNFKK                                  
Sbjct: 1   MTVVATAAALSLPISFSKSPKFNFKK---------------------------------- 60

Query: 61  YILLSVKVGFRVFAVFGEEGAIERKSGWQTLFDVEDPRTKVPQSKGKFLDANQALEVARN 120
               SVKVGFRVFAVFGEEGAIERKSGWQTLFDVEDPRTKVPQSKGKFLDANQALEVARN
Sbjct: 61  ----SVKVGFRVFAVFGEEGAIERKSGWQTLFDVEDPRTKVPQSKGKFLDANQALEVARN 120

Query: 121 DIQYCDWRARQDVLTIMHLHEKVVEVLNPLARNYKSIGTMKKELAELQGELAEAHKQVHK 180
           DIQYCDWRARQDVLTIMHLHEKVVEVLNPLARNYKSIGTMKKELAELQGELAEAHKQVHK
Sbjct: 121 DIQYCDWRARQDVLTIMHLHEKVVEVLNPLARNYKSIGTMKKELAELQGELAEAHKQVHK 180

Query: 181 SEARVSTALDKLAYMEELVHDRLLQDRNTAELDSPSTSPGTSRQSHDSITRRSPKKSLNV 240
           SEARVSTALDKLAYMEELVHDRLLQDRN AELDSPSTSPGTS QSHDSITRRSPKKSLNV
Sbjct: 181 SEARVSTALDKLAYMEELVHDRLLQDRNAAELDSPSTSPGTSTQSHDSITRRSPKKSLNV 240

Query: 241 SGPVEPYHPRLKNFWYPVAFSSDLRDDTMIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRA 300
           SGPVEPYHPRLKNFWYPVAFSSDLRDDTMIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRA
Sbjct: 241 SGPVEPYHPRLKNFWYPVAFSSDLRDDTMIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRA 300

Query: 301 CPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGND 360
           CPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGND
Sbjct: 301 CPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGND 345

Query: 361 PPAANLPSLQPPPGFQIHAEVIV 384
           PPAANLPSLQPPPGFQIHAE+++
Sbjct: 361 PPAANLPSLQPPPGFQIHAELVI 345

[Close]

BLAST of Carg24439 vs. NCBI nr
Match: XP_022990515.1 (chlorophyllide a oxygenase, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 683.3 bits (1762), Expect = 4.8e-193
Identity = 336/383 (87.73%), Postives = 340/383 (88.77%), Query Frame = 0


Query: 1   MTVVATAAALSLPISFSKSPKFNFKKVRVSFSFPDLVVCILVSISVRGKEDREFILVISM 60
           MTVVATAAALSLPISFSKSPK N+KK                                  
Sbjct: 1   MTVVATAAALSLPISFSKSPKLNYKK---------------------------------- 60

Query: 61  YILLSVKVGFRVFAVFGEEGAIERKSGWQTLFDVEDPRTKVPQSKGKFLDANQALEVARN 120
               SVKVGFRVFAVFGEEGA E KSGWQTLFDVEDPRTKVPQSKGKFLDANQALEVARN
Sbjct: 61  ----SVKVGFRVFAVFGEEGATEIKSGWQTLFDVEDPRTKVPQSKGKFLDANQALEVARN 120

Query: 121 DIQYCDWRARQDVLTIMHLHEKVVEVLNPLARNYKSIGTMKKELAELQGELAEAHKQVHK 180
           DIQYCDWRARQDVLTIMHLHEKVVEVLNPLARNYKSIGTMKKELAELQGELAEAHKQVHK
Sbjct: 121 DIQYCDWRARQDVLTIMHLHEKVVEVLNPLARNYKSIGTMKKELAELQGELAEAHKQVHK 180

Query: 181 SEARVSTALDKLAYMEELVHDRLLQDRNTAELDSPSTSPGTSRQSHDSITRRSPKKSLNV 240
           SEARVSTALDKLAYMEELVHDRLLQDRNTAELDSPSTSPGTS QSHDSITRRSPKKSLNV
Sbjct: 181 SEARVSTALDKLAYMEELVHDRLLQDRNTAELDSPSTSPGTSTQSHDSITRRSPKKSLNV 240

Query: 241 SGPVEPYHPRLKNFWYPVAFSSDLRDDTMIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRA 300
           SGPVEPYHPRLKNFWYPVAFSSDLRDDTMIPFDCFEE WVLFRGKDGNPGCIRNTCAHRA
Sbjct: 241 SGPVEPYHPRLKNFWYPVAFSSDLRDDTMIPFDCFEESWVLFRGKDGNPGCIRNTCAHRA 300

Query: 301 CPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGND 360
           CPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGND
Sbjct: 301 CPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGND 345

Query: 361 PPAANLPSLQPPPGFQIHAEVIV 384
           PPAANLPSLQPPPGFQIHAE+++
Sbjct: 361 PPAANLPSLQPPPGFQIHAELVI 345

[Close]

BLAST of Carg24439 vs. NCBI nr
Match: XP_008466715.2 (PREDICTED: chlorophyllide a oxygenase, chloroplastic [Cucumis melo])

HSP 1 Score: 651.0 bits (1678), Expect = 2.6e-183
Identity = 320/383 (83.55%), Postives = 331/383 (86.42%), Query Frame = 0


Query: 1   MTVVATAAALSLPISFSKSPKFNFKKVRVSFSFPDLVVCILVSISVRGKEDREFILVISM 60
           MTVVATAAALSLPISFSKSPK NFKK                                  
Sbjct: 1   MTVVATAAALSLPISFSKSPKLNFKK---------------------------------- 60

Query: 61  YILLSVKVGFRVFAVFGEEGAIERKSGWQTLFDVEDPRTKVPQSKGKFLDANQALEVARN 120
               SVK GFRVFAVFGEEGAIERKSGW+TLFDVEDPRTKVPQ KGKFLD NQALEVAR 
Sbjct: 61  ----SVKGGFRVFAVFGEEGAIERKSGWETLFDVEDPRTKVPQCKGKFLDVNQALEVARY 120

Query: 121 DIQYCDWRARQDVLTIMHLHEKVVEVLNPLARNYKSIGTMKKELAELQGELAEAHKQVHK 180
           DIQYCDWRARQDVL IM LHEKVVEVLNPLAR+YKSIGTMKKELA LQ ELAEAH+QVH 
Sbjct: 121 DIQYCDWRARQDVLAIMLLHEKVVEVLNPLARDYKSIGTMKKELAGLQDELAEAHRQVHI 180

Query: 181 SEARVSTALDKLAYMEELVHDRLLQDRNTAELDSPSTSPGTSRQSHDSITRRSPKKSLNV 240
           SEARV+TALDKLAYMEELVHDRLLQDRNTAELDSPST PGTS QSHDS+ RRSPKKSLNV
Sbjct: 181 SEARVATALDKLAYMEELVHDRLLQDRNTAELDSPSTLPGTSTQSHDSVNRRSPKKSLNV 240

Query: 241 SGPVEPYHPRLKNFWYPVAFSSDLRDDTMIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRA 300
           SGPVEPY+PRLKNFWYPVAFSSDL+DD MIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRA
Sbjct: 241 SGPVEPYNPRLKNFWYPVAFSSDLKDDIMIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRA 300

Query: 301 CPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGND 360
           CPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGND
Sbjct: 301 CPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGND 345

Query: 361 PPAANLPSLQPPPGFQIHAEVIV 384
           PPAANLPSL+PPPGFQIHAE+++
Sbjct: 361 PPAANLPSLKPPPGFQIHAELVI 345

[Close]

BLAST of Carg24439 vs. NCBI nr
Match: XP_022992995.1 (chlorophyllide a oxygenase, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 648.3 bits (1671), Expect = 1.7e-182
Identity = 316/383 (82.51%), Postives = 330/383 (86.16%), Query Frame = 0


Query: 1   MTVVATAAALSLPISFSKSPKFNFKKVRVSFSFPDLVVCILVSISVRGKEDREFILVISM 60
           MTVVATAAALSLPI  SKSPK NF+K                                  
Sbjct: 1   MTVVATAAALSLPIYISKSPKLNFRK---------------------------------- 60

Query: 61  YILLSVKVGFRVFAVFGEEGAIERKSGWQTLFDVEDPRTKVPQSKGKFLDANQALEVARN 120
               SVK GFRVFAVFG+EGAIERKSGW+TLFDVEDPRTKVPQ KGKFLD NQALEVAR 
Sbjct: 61  ----SVKGGFRVFAVFGDEGAIERKSGWETLFDVEDPRTKVPQCKGKFLDVNQALEVARY 120

Query: 121 DIQYCDWRARQDVLTIMHLHEKVVEVLNPLARNYKSIGTMKKELAELQGELAEAHKQVHK 180
           DIQYCDWRARQDVLTIM LHEKVVEVLNPLAR+YKSIGTMKKELA LQ ELAEAH+QVH 
Sbjct: 121 DIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSIGTMKKELAGLQDELAEAHRQVHI 180

Query: 181 SEARVSTALDKLAYMEELVHDRLLQDRNTAELDSPSTSPGTSRQSHDSITRRSPKKSLNV 240
           SEARV+TALDKLAYMEELVHDRLLQDRNTAELD+PSTSPGTS QSHDS+ RRSPKKSLNV
Sbjct: 181 SEARVATALDKLAYMEELVHDRLLQDRNTAELDTPSTSPGTSTQSHDSVNRRSPKKSLNV 240

Query: 241 SGPVEPYHPRLKNFWYPVAFSSDLRDDTMIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRA 300
           SGP +PYHPRLKNFWYPVAFSSDL+DDTM+PFDCFEEPWVLFRGKDGNPGCIRNTCAHRA
Sbjct: 241 SGPTQPYHPRLKNFWYPVAFSSDLKDDTMVPFDCFEEPWVLFRGKDGNPGCIRNTCAHRA 300

Query: 301 CPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGND 360
           CPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRL NVKIKSLPCFEKEGMIWVWPGND
Sbjct: 301 CPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLQNVKIKSLPCFEKEGMIWVWPGND 345

Query: 361 PPAANLPSLQPPPGFQIHAEVIV 384
           PPAANLPSLQPPPGFQIHAE+++
Sbjct: 361 PPAANLPSLQPPPGFQIHAELVI 345

[Close]

BLAST of Carg24439 vs. TAIR10
Match: AT1G44446.1 (Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain)

HSP 1 Score: 490.3 bits (1261), Expect = 1.1e-138
Identity = 230/319 (72.10%), Postives = 269/319 (84.33%), Query Frame = 0


Query: 66  VKVGFRVFAVFGEE-GAIERKSGWQTLFDVEDPRTKVPQSKGKFLDANQALEVARNDIQY 125
           VK  FRVFAVFG+E G +E+KS W+ LFDVEDPR+K P  KGKFLD NQA+EVAR DIQY
Sbjct: 31  VKGEFRVFAVFGDESGLVEKKSQWRPLFDVEDPRSKAPPYKGKFLDVNQAIEVARFDIQY 90

Query: 126 CDWRARQDVLTIMHLHEKVVEVLNPLARNYKSIGTMKKELAELQGELAEAHKQVHKSEAR 185
            DWRARQD+LTIM LH+KVV+VLNPLAR YKSIGT+KKELA LQ EL++AH+QVH SEAR
Sbjct: 91  LDWRARQDLLTIMILHDKVVDVLNPLAREYKSIGTVKKELAGLQEELSKAHQQVHISEAR 150

Query: 186 VSTALDKLAYMEELVHDRLLQDRNTAELDSPSTSPGTSRQSHDSITRRSPKKSLNVSGPV 245
           VSTALDKLA+MEELV+DRLL  R   ELD PS+S   S    D     +  KSLNVSGPV
Sbjct: 151 VSTALDKLAHMEELVNDRLLPGRVVTELDKPSSSTTASAVELDREKTNTGAKSLNVSGPV 210

Query: 246 EPYHPRLKNFWYPVAFSSDLRDDTMIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRACPLH 305
            PY P LKNFWYPVAF++DL+ DTM+P +CFE+PWV+FRG+DG PGC+RNTCAHRACPL 
Sbjct: 211 PPYSPHLKNFWYPVAFTADLKHDTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPLD 270

Query: 306 LGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGNDPPAA 365
           LG+VN+GR+QCPYHGWEYSTDG+C+KMPST+LL VKIKSLPC E+EGMIW+WPG++PPA 
Sbjct: 271 LGTVNEGRIQCPYHGWEYSTDGECKKMPSTKLLKVKIKSLPCLEQEGMIWIWPGDEPPAP 330

Query: 366 NLPSLQPPPGFQIHAEVIV 384
            LPSLQPP GF IHAE+++
Sbjct: 331 ILPSLQPPSGFLIHAELVM 349

[Close]

BLAST of Carg24439 vs. TAIR10
Match: AT2G24820.1 (translocon at the inner envelope membrane of chloroplasts 55-II)

HSP 1 Score: 85.9 bits (211), Expect = 6.1e-17
Identity = 37/128 (28.91%), Postives = 64/128 (50.00%), Query Frame = 0


Query: 255 WYPVAFSSDLRDDTMIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRACPLHLGSVNDGRVQ 314
           WYP+  + ++ +D  +    ++   VL++  +G   C  + C HR   L  G + DGR++
Sbjct: 88  WYPLYLTKNVPEDAPLGLTVYDRQIVLYKDGEGTLRCYEDRCPHRLAKLSEGQLIDGRLE 147

Query: 315 CPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCF------EKEGMIWVWPGNDPPAANLPS 374
           C YHGW++  +GKC K+P     + KI    C       + +G++WVW     P    P+
Sbjct: 148 CLYHGWQFEGEGKCVKIPQLP-ASAKIPKAACVKTYEVKDSQGVVWVWMSTKTP----PN 207

Query: 375 LQPPPGFQ 377
            +  P F+
Sbjct: 208 PEKLPWFE 210

[Close]

BLAST of Carg24439 vs. TAIR10
Match: AT4G25650.2 (ACD1-like)

HSP 1 Score: 66.2 bits (160), Expect = 5.0e-11
Identity = 38/139 (27.34%), Postives = 57/139 (41.01%), Query Frame = 0


Query: 255 WYPVAFSSDLRD-----------DTMIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRACPL 314
           WYPV    DL             D ++ +D  E+ W +          + +TC HR  PL
Sbjct: 85  WYPVMPICDLDKKVPHGKKVMGIDLVVWWDRNEKQWKV----------MDDTCPHRLAPL 144

Query: 315 HLGSVND-GRVQCPYHGWEYSTDGKCEKMPST--------RLLNVKIKSLPCFEKEGMIW 374
             G ++  GR+QC YHGW ++  G C+ +P                +   P   +  +IW
Sbjct: 145 SDGRIDQWGRLQCVYHGWCFNGSGDCKLIPQAPPDGPPVHTFKQACVAVYPSTVQHEIIW 204

[Close]

BLAST of Carg24439 vs. Swiss-Prot
Match: sp|Q9MBA1|CAO_ARATH (Chlorophyllide a oxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CAO PE=1 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 1.9e-137
Identity = 230/319 (72.10%), Postives = 269/319 (84.33%), Query Frame = 0


Query: 66  VKVGFRVFAVFGEE-GAIERKSGWQTLFDVEDPRTKVPQSKGKFLDANQALEVARNDIQY 125
           VK  FRVFAVFG+E G +E+KS W+ LFDVEDPR+K P  KGKFLD NQA+EVAR DIQY
Sbjct: 31  VKGEFRVFAVFGDESGLVEKKSQWRPLFDVEDPRSKAPPYKGKFLDVNQAIEVARFDIQY 90

Query: 126 CDWRARQDVLTIMHLHEKVVEVLNPLARNYKSIGTMKKELAELQGELAEAHKQVHKSEAR 185
            DWRARQD+LTIM LH+KVV+VLNPLAR YKSIGT+KKELA LQ EL++AH+QVH SEAR
Sbjct: 91  LDWRARQDLLTIMILHDKVVDVLNPLAREYKSIGTVKKELAGLQEELSKAHQQVHISEAR 150

Query: 186 VSTALDKLAYMEELVHDRLLQDRNTAELDSPSTSPGTSRQSHDSITRRSPKKSLNVSGPV 245
           VSTALDKLA+MEELV+DRLL  R   ELD PS+S   S    D     +  KSLNVSGPV
Sbjct: 151 VSTALDKLAHMEELVNDRLLPGRVVTELDKPSSSTTASAVELDREKTNTGAKSLNVSGPV 210

Query: 246 EPYHPRLKNFWYPVAFSSDLRDDTMIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRACPLH 305
            PY P LKNFWYPVAF++DL+ DTM+P +CFE+PWV+FRG+DG PGC+RNTCAHRACPL 
Sbjct: 211 PPYSPHLKNFWYPVAFTADLKHDTMVPIECFEQPWVIFRGEDGKPGCVRNTCAHRACPLD 270

Query: 306 LGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGNDPPAA 365
           LG+VN+GR+QCPYHGWEYSTDG+C+KMPST+LL VKIKSLPC E+EGMIW+WPG++PPA 
Sbjct: 271 LGTVNEGRIQCPYHGWEYSTDGECKKMPSTKLLKVKIKSLPCLEQEGMIWIWPGDEPPAP 330

Query: 366 NLPSLQPPPGFQIHAEVIV 384
            LPSLQPP GF IHAE+++
Sbjct: 331 ILPSLQPPSGFLIHAELVM 349

[Close]

BLAST of Carg24439 vs. Swiss-Prot
Match: sp|Q8S7E1|CAO_ORYSJ (Chlorophyllide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CAO PE=2 SV=1)

HSP 1 Score: 485.0 bits (1247), Expect = 8.2e-136
Identity = 222/318 (69.81%), Postives = 267/318 (83.96%), Query Frame = 0


Query: 69  GFRVFAVFGEEGA-IERKSGWQTLFDVEDPRTKVPQSKGKFLDANQALEVARNDIQYCDW 128
           G +V+AV G++GA   + + W+ LF V+DP  +VP +KGKFLD NQALEV R DIQYCDW
Sbjct: 32  GIKVYAVLGDDGADYAKNNAWEALFHVDDPGPRVPIAKGKFLDVNQALEVVRFDIQYCDW 91

Query: 129 RARQDVLTIMHLHEKVVEVLNPLARNYKSIGTMKKELAELQGELAEAHKQVHKSEARVST 188
           RARQD+LTIM LH KVVEVLNPLAR +KSIGT++KELAELQ ELA+AH QVH SE RVS+
Sbjct: 92  RARQDLLTIMVLHNKVVEVLNPLAREFKSIGTLRKELAELQEELAKAHNQVHLSETRVSS 151

Query: 189 ALDKLAYMEELVHDRLLQDRNTAELDSPSTS--PGTSRQSHDSITRRSPKKSLNVSGPVE 248
           ALDKLA ME LV+DRLLQD  ++   +  TS  P TS  S   + ++ P++SLNVSGPV+
Sbjct: 152 ALDKLAQMETLVNDRLLQDGGSSASTAECTSLAPSTSSASR-VVNKKPPRRSLNVSGPVQ 211

Query: 249 PYHPRLKNFWYPVAFSSDLRDDTMIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRACPLHL 308
           PY+P LKNFWYPVAFSSDL+DDTM+P DCFEE WV+FRGKDG PGC+ NTCAHRACPLHL
Sbjct: 212 PYNPSLKNFWYPVAFSSDLKDDTMVPIDCFEEQWVIFRGKDGRPGCVMNTCAHRACPLHL 271

Query: 309 GSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGNDPPAAN 368
           GSVN+GR+QCPYHGWEYSTDGKCEKMPST++LNV+I+SLPCFE+EGM+W+WPGNDPP + 
Sbjct: 272 GSVNEGRIQCPYHGWEYSTDGKCEKMPSTKMLNVRIRSLPCFEQEGMVWIWPGNDPPKST 331

Query: 369 LPSLQPPPGFQIHAEVIV 384
           +PSL PP GF IHAE+++
Sbjct: 332 IPSLLPPSGFTIHAEIVM 348

[Close]

BLAST of Carg24439 vs. Swiss-Prot
Match: sp|Q9ZWM5|CAO_CHLRE (Chlorophyllide a oxygenase, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=CAO PE=2 SV=2)

HSP 1 Score: 193.0 bits (489), Expect = 6.4e-48
Identity = 89/177 (50.28%), Postives = 115/177 (64.97%), Query Frame = 0


Query: 209 TAELDSPSTSPGTSRQSHDSITRRSPKKSLNVSGPVEPYHPRLKNFWYPVAFSSDLRDDT 268
           T   + PSTS GT        ++ + ++S  +   +E     L+NFWYP  FS+ L  DT
Sbjct: 260 TVTQEVPSTSYGTPVDRAPRRSKAAIRRSRGLESSME-IEEGLRNFWYPAEFSARLPKDT 319

Query: 269 MIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRACPLHLGSVNDGRVQCPYHGWEYSTDGKC 328
           ++PF+ F EPWV+FR + G P CIR+ CAHR CPL LG V +G+V CPYHGWE++ DG C
Sbjct: 320 LVPFELFGEPWVMFRDEKGQPSCIRDECAHRGCPLSLGKVVEGQVMCPYHGWEFNGDGAC 379

Query: 329 EKMPSTRLL-NVKIKSLPCFEKEGMIWVWPGNDPPAANLPSL-QPPPGFQIHAEVIV 384
            KMPST    NV + +LPC EK+G IWVWPG+  PA  LP   QPP GF IHAE++V
Sbjct: 380 TKMPSTPFCRNVGVAALPCAEKDGFIWVWPGDGLPAETLPDFAQPPEGFLIHAEIMV 435

[Close]

BLAST of Carg24439 vs. Swiss-Prot
Match: sp|Q9XJ38|CAO_DUNSA (Chlorophyllide a oxygenase, chloroplastic OS=Dunaliella salina OX=3046 GN=CAO PE=2 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.3e-43
Identity = 103/265 (38.87%), Postives = 137/265 (51.70%), Query Frame = 0


Query: 160 MKKELAELQGELAEAHKQVHKSEARVSTALDKL----AYMEELVHDRLLQDRNTAELDSP 219
           M+ +L  LQ E++EA  ++  SEARV+  L ++    A    L   RL    +T    S 
Sbjct: 1   MQSKLLGLQDEISEARDKLRTSEARVAQNLKRVDELKAEAASLERMRLASSSSTDSTVSI 60

Query: 220 STSPG-----------------------------TSRQSH----DSITRR--SPKKSLNV 279
           ++  G                             TS  SH        RR   PK S  +
Sbjct: 61  ASRGGAAVAATTSVPDHVEREGIQSRVRGSGMASTSYPSHVPQPSQAVRRGPKPKDSRRL 120

Query: 280 SGPVEPYHPRLKNFWYPVAFSSDLRDDTMIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRA 339
              +E     L+NFWYP  F+  L    M+PFD F  PWVLFR +   P CI+++CAHRA
Sbjct: 121 RSSLE-LEDGLRNFWYPTEFAKKLEPGMMVPFDLFGVPWVLFRDEHSAPTCIKDSCAHRA 180

Query: 340 CPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLN-VKIKSLPCFEKEGMIWVWPGN 384
           CPL LG V +G VQCPYHGWE+   G C KMPSTR+ + V + +LPC EK+G +WVWPG+
Sbjct: 181 CPLSLGKVINGHVQCPYHGWEFDGSGACTKMPSTRMCHGVGVAALPCVEKDGFVWVWPGD 240

[Close]

BLAST of Carg24439 vs. Swiss-Prot
Match: sp|O05616|VANA_PSEUH (Vanillate O-demethylase oxygenase subunit OS=Pseudomonas sp. (strain HR199 / DSM 7063) OX=86003 GN=vanA PE=3 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 2.2e-16
Identity = 44/109 (40.37%), Postives = 56/109 (51.38%), Query Frame = 0


Query: 252 KNFWYPVAFSSDLRDDTMIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRACPLHLGSVNDG 311
           KN WY VA + D   D  +      E  V +RG +G    + + C HR  PL LG V DG
Sbjct: 4   KNAWY-VACTPDEIADKPLGRQICNEKIVFYRGPEGRVAAVEDFCPHRGAPLSLGFVRDG 63

Query: 312 RVQCPYHGWEYSTDGKCEKMPSTRLLNVK-IKSLPCFEKEGMIWVWPGN 360
           ++ C YHG E   +GK   MP  R+     IKS    E+ G IWVWPG+
Sbjct: 64  KLICGYHGLEMGCEGKTLAMPGQRVQGFPCIKSYAVEERYGFIWVWPGD 111

[Close]

BLAST of Carg24439 vs. TrEMBL
Match: tr|A0A1S3CRX3|A0A1S3CRX3_CUCME (chlorophyllide a oxygenase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103504061 PE=4 SV=1)

HSP 1 Score: 651.0 bits (1678), Expect = 1.7e-183
Identity = 320/383 (83.55%), Postives = 331/383 (86.42%), Query Frame = 0


Query: 1   MTVVATAAALSLPISFSKSPKFNFKKVRVSFSFPDLVVCILVSISVRGKEDREFILVISM 60
           MTVVATAAALSLPISFSKSPK NFKK                                  
Sbjct: 1   MTVVATAAALSLPISFSKSPKLNFKK---------------------------------- 60

Query: 61  YILLSVKVGFRVFAVFGEEGAIERKSGWQTLFDVEDPRTKVPQSKGKFLDANQALEVARN 120
               SVK GFRVFAVFGEEGAIERKSGW+TLFDVEDPRTKVPQ KGKFLD NQALEVAR 
Sbjct: 61  ----SVKGGFRVFAVFGEEGAIERKSGWETLFDVEDPRTKVPQCKGKFLDVNQALEVARY 120

Query: 121 DIQYCDWRARQDVLTIMHLHEKVVEVLNPLARNYKSIGTMKKELAELQGELAEAHKQVHK 180
           DIQYCDWRARQDVL IM LHEKVVEVLNPLAR+YKSIGTMKKELA LQ ELAEAH+QVH 
Sbjct: 121 DIQYCDWRARQDVLAIMLLHEKVVEVLNPLARDYKSIGTMKKELAGLQDELAEAHRQVHI 180

Query: 181 SEARVSTALDKLAYMEELVHDRLLQDRNTAELDSPSTSPGTSRQSHDSITRRSPKKSLNV 240
           SEARV+TALDKLAYMEELVHDRLLQDRNTAELDSPST PGTS QSHDS+ RRSPKKSLNV
Sbjct: 181 SEARVATALDKLAYMEELVHDRLLQDRNTAELDSPSTLPGTSTQSHDSVNRRSPKKSLNV 240

Query: 241 SGPVEPYHPRLKNFWYPVAFSSDLRDDTMIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRA 300
           SGPVEPY+PRLKNFWYPVAFSSDL+DD MIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRA
Sbjct: 241 SGPVEPYNPRLKNFWYPVAFSSDLKDDIMIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRA 300

Query: 301 CPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGND 360
           CPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGND
Sbjct: 301 CPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGND 345

Query: 361 PPAANLPSLQPPPGFQIHAEVIV 384
           PPAANLPSL+PPPGFQIHAE+++
Sbjct: 361 PPAANLPSLKPPPGFQIHAELVI 345

[Close]

BLAST of Carg24439 vs. TrEMBL
Match: tr|A0A0A0KIX0|A0A0A0KIX0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G385090 PE=4 SV=1)

HSP 1 Score: 642.5 bits (1656), Expect = 6.2e-181
Identity = 317/383 (82.77%), Postives = 328/383 (85.64%), Query Frame = 0


Query: 1   MTVVATAAALSLPISFSKSPKFNFKKVRVSFSFPDLVVCILVSISVRGKEDREFILVISM 60
           MTVVATAAALSLPISFSKSP+ NFKK                                  
Sbjct: 1   MTVVATAAALSLPISFSKSPRLNFKK---------------------------------- 60

Query: 61  YILLSVKVGFRVFAVFGEEGAIERKSGWQTLFDVEDPRTKVPQSKGKFLDANQALEVARN 120
               SVK GFRVFAVFGEEGAIERKSGW+TLFDVEDPRTKVPQ KGKFLD NQALEVAR 
Sbjct: 61  ----SVKGGFRVFAVFGEEGAIERKSGWETLFDVEDPRTKVPQCKGKFLDVNQALEVARY 120

Query: 121 DIQYCDWRARQDVLTIMHLHEKVVEVLNPLARNYKSIGTMKKELAELQGELAEAHKQVHK 180
           DIQYCDWRARQDVL IM LHEKVVEVLNPLAR+YKSIGTMKKELA LQ ELAEAH+QVH 
Sbjct: 121 DIQYCDWRARQDVLAIMLLHEKVVEVLNPLARDYKSIGTMKKELAGLQDELAEAHRQVHI 180

Query: 181 SEARVSTALDKLAYMEELVHDRLLQDRNTAELDSPSTSPGTSRQSHDSITRRSPKKSLNV 240
           SEARV+TALDKLAYMEELVHDRLLQDRNTAELDSPST PGTS Q  DSI R SPKKSLNV
Sbjct: 181 SEARVATALDKLAYMEELVHDRLLQDRNTAELDSPSTLPGTSTQPLDSINRSSPKKSLNV 240

Query: 241 SGPVEPYHPRLKNFWYPVAFSSDLRDDTMIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRA 300
           SGPVEPYHPRLKNFWYPVAFSSDL++D MIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRA
Sbjct: 241 SGPVEPYHPRLKNFWYPVAFSSDLKNDIMIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRA 300

Query: 301 CPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGND 360
           CPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGND
Sbjct: 301 CPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGND 345

Query: 361 PPAANLPSLQPPPGFQIHAEVIV 384
           PPAANLPSL+PPPGFQIHAE+++
Sbjct: 361 PPAANLPSLKPPPGFQIHAELVI 345

[Close]

BLAST of Carg24439 vs. TrEMBL
Match: tr|A0A2N9F5K2|A0A2N9F5K2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14118 PE=4 SV=1)

HSP 1 Score: 575.5 bits (1482), Expect = 9.3e-161
Identity = 280/383 (73.11%), Postives = 308/383 (80.42%), Query Frame = 0


Query: 1   MTVVATAAALSLPISFSKSPKFNFKKVRVSFSFPDLVVCILVSISVRGKEDREFILVISM 60
           MT+VATAAALSLPIS S+S K N KK                   VRG            
Sbjct: 1   MTIVATAAALSLPISLSRSSKLNTKK------------------GVRG------------ 60

Query: 61  YILLSVKVGFRVFAVFGEEGAIERKSGWQTLFDVEDPRTKVPQSKGKFLDANQALEVARN 120
                   GFRV AVFGEEG   +KS W TLFDVEDPR+KVPQ KGKFLD +QA+EVAR 
Sbjct: 61  --------GFRVVAVFGEEGGTGKKSAWGTLFDVEDPRSKVPQCKGKFLDVHQAVEVARY 120

Query: 121 DIQYCDWRARQDVLTIMHLHEKVVEVLNPLARNYKSIGTMKKELAELQGELAEAHKQVHK 180
           DIQYCDWRAR+DVLTIM LHEKVVEVLNPLAR YKSIGTMKKELAELQGELA+AHKQVH 
Sbjct: 121 DIQYCDWRARRDVLTIMLLHEKVVEVLNPLAREYKSIGTMKKELAELQGELAQAHKQVHI 180

Query: 181 SEARVSTALDKLAYMEELVHDRLLQDRNTAELDSPSTSPGTSRQSHDSITRRSPKKSLNV 240
           SEARV TALDKLAYMEELV+DRLLQDRNT   D  S SP TS QS + + R+  +KSLNV
Sbjct: 181 SEARVGTALDKLAYMEELVNDRLLQDRNTTASDQTSPSPSTSTQSLEVVQRKLQRKSLNV 240

Query: 241 SGPVEPYHPRLKNFWYPVAFSSDLRDDTMIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRA 300
           SGPV+PYHPRLKNFWYPVAFS+DL++DTM+P DCFEE WV+FRG DG PGC+RNTCAHRA
Sbjct: 241 SGPVKPYHPRLKNFWYPVAFSTDLKEDTMMPIDCFEEQWVVFRGNDGKPGCVRNTCAHRA 300

Query: 301 CPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGND 360
           CPLHLGSVN+GR+QCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFE+EGMIW+WPGND
Sbjct: 301 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEQEGMIWIWPGND 345

Query: 361 PPAANLPSLQPPPGFQIHAEVIV 384
           PP A +PSLQPPPGFQIHAE+++
Sbjct: 361 PPTATIPSLQPPPGFQIHAEIVM 345

[Close]

BLAST of Carg24439 vs. TrEMBL
Match: tr|A0A2I4DKV1|A0A2I4DKV1_9ROSI (chlorophyllide a oxygenase, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC108981140 PE=4 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 1.5e-158
Identity = 273/383 (71.28%), Postives = 305/383 (79.63%), Query Frame = 0


Query: 1   MTVVATAAALSLPISFSKSPKFNFKKVRVSFSFPDLVVCILVSISVRGKEDREFILVISM 60
           MT VATA ALSLPIS  +  K N KK                                  
Sbjct: 1   MTTVATALALSLPISLCRPSKLNTKK---------------------------------- 60

Query: 61  YILLSVKVGFRVFAVFGEEGAIERKSGWQTLFDVEDPRTKVPQSKGKFLDANQALEVARN 120
                VK G RVFAVFGEEG IE++S W  LFDVEDPR+K+PQ KGKFLD NQALEVAR 
Sbjct: 61  ----GVKGGLRVFAVFGEEGGIEKRSSWGPLFDVEDPRSKLPQCKGKFLDVNQALEVARL 120

Query: 121 DIQYCDWRARQDVLTIMHLHEKVVEVLNPLARNYKSIGTMKKELAELQGELAEAHKQVHK 180
           DIQYCDWRARQDVLTIM LHEKVVEVLNPLAR++KSIGTMKK+LAELQ EL +AH+QVH 
Sbjct: 121 DIQYCDWRARQDVLTIMLLHEKVVEVLNPLARDFKSIGTMKKDLAELQDELTQAHRQVHI 180

Query: 181 SEARVSTALDKLAYMEELVHDRLLQDRNTAELDSPSTSPGTSRQSHDSITRRSPKKSLNV 240
           SEARV+TALDKLAYMEELV+DRLLQDRN   L+  S SP TS Q+ + + RR P+KSLNV
Sbjct: 181 SEARVATALDKLAYMEELVNDRLLQDRNATALEQTSPSPSTSTQATNVMQRRLPRKSLNV 240

Query: 241 SGPVEPYHPRLKNFWYPVAFSSDLRDDTMIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRA 300
           SGPV+PYHPRL NFWYPVAFS+DL+DDTM+P DCFEE WV+FRGKDG PGC+RNTCAHRA
Sbjct: 241 SGPVQPYHPRLMNFWYPVAFSADLKDDTMVPIDCFEEQWVIFRGKDGKPGCVRNTCAHRA 300

Query: 301 CPLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGND 360
           CPLHLGSVN+GR+QCPYHGWEYSTDGKCEKMPSTRLL+VKIKSLPCFE+EGMIW+WPGND
Sbjct: 301 CPLHLGSVNEGRIQCPYHGWEYSTDGKCEKMPSTRLLDVKIKSLPCFEQEGMIWIWPGND 345

Query: 361 PPAANLPSLQPPPGFQIHAEVIV 384
           PP A LPSLQPPPGFQ+HAE+++
Sbjct: 361 PPTATLPSLQPPPGFQVHAEIVM 345

[Close]

BLAST of Carg24439 vs. TrEMBL
Match: tr|A0A2P4J0X6|A0A2P4J0X6_QUESU (Chlorophyllide a oxygenase, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_35646 PE=4 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 1.5e-158
Identity = 276/382 (72.25%), Postives = 307/382 (80.37%), Query Frame = 0


Query: 2   TVVATAAALSLPISFSKSPKFNFKKVRVSFSFPDLVVCILVSISVRGKEDREFILVISMY 61
           T +  AAALSLPIS  +S K N KK                   VRG             
Sbjct: 456 TKILKAAALSLPISLCRSSKLNTKK------------------GVRG------------- 515

Query: 62  ILLSVKVGFRVFAVFGEEGAIERKSGWQTLFDVEDPRTKVPQSKGKFLDANQALEVARND 121
                  GFRV AVF EEG +E+KS W  LFDVEDPR+KVPQ KGKFLD  QALEVAR D
Sbjct: 516 -------GFRVVAVFREEGGLEKKSTWGQLFDVEDPRSKVPQCKGKFLDVYQALEVARYD 575

Query: 122 IQYCDWRARQDVLTIMHLHEKVVEVLNPLARNYKSIGTMKKELAELQGELAEAHKQVHKS 181
           +QYCDWRARQDVLTIM LHEKVVEVLNPLAR+YKSIGTMKKELAELQGELA+AHKQVH S
Sbjct: 576 LQYCDWRARQDVLTIMLLHEKVVEVLNPLARDYKSIGTMKKELAELQGELAQAHKQVHMS 635

Query: 182 EARVSTALDKLAYMEELVHDRLLQDRNTAELDSPSTSPGTSRQSHDSITRRSPKKSLNVS 241
           EARV+TALDKLAYMEELV+DRLLQDR++   D  S SP TS QS + + RRSP+KSLNVS
Sbjct: 636 EARVATALDKLAYMEELVNDRLLQDRSSTASDQTSPSPSTSTQSLEVVQRRSPRKSLNVS 695

Query: 242 GPVEPYHPRLKNFWYPVAFSSDLRDDTMIPFDCFEEPWVLFRGKDGNPGCIRNTCAHRAC 301
           GPV+PYHPRLKNFWYPVAFS+DL++DTMIP +CFEEPWV+FRGKDG PGCI+NTCAHRAC
Sbjct: 696 GPVKPYHPRLKNFWYPVAFSNDLKEDTMIPIECFEEPWVVFRGKDGKPGCIQNTCAHRAC 755

Query: 302 PLHLGSVNDGRVQCPYHGWEYSTDGKCEKMPSTRLLNVKIKSLPCFEKEGMIWVWPGNDP 361
           PLHLGSVN GR+QCPYHGWEYSTDGKCEKMPSTRLLN+KIKSLPCFE+EGMIW+WPGNDP
Sbjct: 756 PLHLGSVNKGRIQCPYHGWEYSTDGKCEKMPSTRLLNLKIKSLPCFEQEGMIWIWPGNDP 799

Query: 362 PAANLPSLQPPPGFQIHAEVIV 384
           P A +PSL+PPPGFQIHAE+++
Sbjct: 816 PTATIPSLEPPPGFQIHAEIVM 799

The following BLAST results are available for this feature:

BLAST of Carg24439 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023541912.1	3.5e-196	88.77	chlorophyllide a oxygenase, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022962444.1	6.0e-196	88.77	chlorophyllide a oxygenase, chloroplastic-like [Cucurbita moschata]	[more]
XP_022990515.1	4.8e-193	87.73	chlorophyllide a oxygenase, chloroplastic-like [Cucurbita maxima]	[more]
XP_008466715.2	2.6e-183	83.55	PREDICTED: chlorophyllide a oxygenase, chloroplastic [Cucumis melo]	[more]
XP_022992995.1	1.7e-182	82.51	chlorophyllide a oxygenase, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of Carg24439 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G44446.1	1.1e-138	72.10	Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain	[more]
AT2G24820.1	6.1e-17	28.91	translocon at the inner envelope membrane of chloroplasts 55-II	[more]
AT4G25650.2	5.0e-11	27.34	ACD1-like	[more]

BLAST of Carg24439 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9MBA1\|CAO_ARATH	1.9e-137	72.10	Chlorophyllide a oxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CAO...	[more]
sp\|Q8S7E1\|CAO_ORYSJ	8.2e-136	69.81	Chlorophyllide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica OX=399...	[more]
sp\|Q9ZWM5\|CAO_CHLRE	6.4e-48	50.28	Chlorophyllide a oxygenase, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 G...	[more]
sp\|Q9XJ38\|CAO_DUNSA	1.3e-43	38.87	Chlorophyllide a oxygenase, chloroplastic OS=Dunaliella salina OX=3046 GN=CAO PE...	[more]
sp\|O05616\|VANA_PSEUH	2.2e-16	40.37	Vanillate O-demethylase oxygenase subunit OS=Pseudomonas sp. (strain HR199 / DSM...	[more]

BLAST of Carg24439 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CRX3\|A0A1S3CRX3_CUCME	1.7e-183	83.55	chlorophyllide a oxygenase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10350406...	[more]
tr\|A0A0A0KIX0\|A0A0A0KIX0_CUCSA	6.2e-181	82.77	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G385090 PE=4 SV=1	[more]
tr\|A0A2N9F5K2\|A0A2N9F5K2_FAGSY	9.3e-161	73.11	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14118 PE=4 SV=1	[more]
tr\|A0A2I4DKV1\|A0A2I4DKV1_9ROSI	1.5e-158	71.28	chlorophyllide a oxygenase, chloroplastic-like OS=Juglans regia OX=51240 GN=LOC1...	[more]
tr\|A0A2P4J0X6\|A0A2P4J0X6_QUESU	1.5e-158	72.25	Chlorophyllide a oxygenase, chloroplastic OS=Quercus suber OX=58331 GN=CFP56_356...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005506	iron ion binding
GO:0016491	oxidoreductase activity
GO:0051537	2 iron, 2 sulfur cluster binding

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **INTERPRO**
Term	Definition
IPR015881	Ring-hydroxy_dOase_2Fe2S_BS
IPR036922	Rieske_2Fe-2S_sf
IPR017941	Rieske_2Fe-2S

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0051537	2 iron, 2 sulfur cluster binding
molecular_function	GO:0005506	iron ion binding
molecular_function	GO:0016491	oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24439-RA	Carg24439-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 157..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..243
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 209..227
None	No IPR available	PANTHER	PTHR21266	IRON-SULFUR DOMAIN CONTAINING PROTEIN	coord: 124..383
None	No IPR available	PANTHER	PTHR21266:SF19	SUBFAMILY NOT NAMED	coord: 124..383
None	No IPR available	CDD	cd04337	Rieske_RO_Alpha_Cao	coord: 238..366 e-value: 4.7059E-89 score: 266.664
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PFAM	PF00355	Rieske	coord: 255..336 e-value: 8.0E-22 score: 76.9
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PROSITE	PS51296	RIESKE	coord: 255..355 score: 31.65
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	GENE3D	G3DSA:2.102.10.10		coord: 250..373 e-value: 1.2E-35 score: 123.9
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	SUPERFAMILY	SSF50022	ISP domain	coord: 251..360
IPR015881	Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site	PROSITE	PS00570	RING_HYDROXYL_ALPHA	coord: 296..318

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg24439	Wax gourd	carwgoB0538
Carg24439	Wax gourd	carwgoB0540
Carg24439	Silver-seed gourd	carcarB451
Carg24439	Cucumber (Gy14) v2	carcgybB0455
Carg24439	Cucumber (Gy14) v2	carcgybB0456
Carg24439	Cucumber (Gy14) v1	carcgyB0515
Carg24439	Cucurbita maxima (Rimu)	carcmaB0619
Carg24439	Cucurbita maxima (Rimu)	carcmaB0620
Carg24439	Cucurbita maxima (Rimu)	carcmaB0621
Carg24439	Cucurbita moschata (Rifu)	carcmoB0602
Carg24439	Cucurbita moschata (Rifu)	carcmoB0603
Carg24439	Cucurbita moschata (Rifu)	carcmoB0604
Carg24439	Cucurbita pepo (Zucchini)	carcpeB0626
Carg24439	Cucurbita pepo (Zucchini)	carcpeB0627
Carg24439	Cucurbita pepo (Zucchini)	carcpeB0628
Carg24439	Wild cucumber (PI 183967)	carcpiB0482
Carg24439	Wild cucumber (PI 183967)	carcpiB0483
Carg24439	Cucumber (Chinese Long) v2	carcuB0478
Carg24439	Cucumber (Chinese Long) v2	carcuB0477
Carg24439	Cucumber (Chinese Long) v3	carcucB0479
Carg24439	Cucumber (Chinese Long) v3	carcucB0480
Carg24439	Bottle gourd (USVL1VR-Ls)	carlsiB406
Carg24439	Bottle gourd (USVL1VR-Ls)	carlsiB407
Carg24439	Melon (DHL92) v3.5.1	carmeB0451
Carg24439	Melon (DHL92) v3.5.1	carmeB0452
Carg24439	Melon (DHL92) v3.6.1	carmedB0454
Carg24439	Melon (DHL92) v3.6.1	carmedB0455
Carg24439	Watermelon (Charleston Gray)	carwcgB0437
Carg24439	Watermelon (Charleston Gray)	carwcgB0438
Carg24439	Watermelon (97103) v1	carwmB0445
Carg24439	Watermelon (97103) v1	carwmB0446
Carg24439	Watermelon (97103) v2	carwmbB0468
Carg24439	Watermelon (97103) v2	carwmbB0469