Carg24437 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24437
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Chlorophyllide a oxygenase
Location	Cucurbita_argyrosperma_scaffold_353 : 79808 .. 81214 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAACCCAACAGCTTGGTGAAATTTTTGACCCCTGCATCTGGTCTCCAAGGATACTGGGACCCATATCCAATCGACATGGAGTTTCGACCACCTTGTATGGTACTATCAACCATAGGGATTTCCAAGCCAGGAAAACTAGAAGGCCAAACTACAAGGGAATGCTCAACACATCTTCATCAACTTCATGTGTGCTTACCTTCAACAAGACATAAGACAAGACTACTCTATAGAATGTCACTGGATTTCGCTCCCATATTGAAGCATATTCCTTTCATGCACTATCTCTGGAGACATTTCGCAGAACAGGTAAAATTCTCAACTTCTTTTCAGAACAGTATTAAAAGCCCCAGCATTCATGATCATACACGTCCATTTTACAACCAACACCAAGGCTTTTCTTTGTGCAACTCATGCAGGTATTGAATGAGGACTTGAGGCTTGTCATTGGACAGCAAGAAAGAATGCTCAACGGAGAAAACATCTGGAACATGCCAGTTTCTTATGATAAGCTAGGTGTAAGATATAGGCTATGGAGAAATGCAGTAGAGGAAGGAGCAAAACAACTACCCTTCAGCAAATCAAATTGAACAGTATCCAATCGTAATTAACTTGAAACACTTCTTAGGACCCATAAACAAGCCAAGCCCCCTTCATTTTTAGAACTCAAAATTGCAGATGAAAGACCCATGAGGCTGAGATAAGACCAACCTACCTCCCTTTCAGCTTCCACTTTTGATAAGAACACTTACAATCAAAACTCTACAGAAGCTGAAGAAGAAAATCATCTGAAAACAGAGAGAAGCCAGCTCTTGCCCCCTACAGAATCCCCTTGTAAATTAGAAACTGCTATATAAATTAAATCGGCTTTGTAAAAGTATTCGAGTACTCTTTGTTGTAAGCATCTTCTTCAATGATAAAGTAATGTTCAAAATTCATTCTCAATCAGATACCATTTCGATTACTTGCAAACAAAAACCATAAAAGATCACCGGACGATTTGAAACAAAAGTAAATTTACAGAGAAGAGCCACAGAAAGGGCAGAAGCTGAAATCGGGCTCCACTACTTTGTTACAGGAATGGCAACGAAGGGCCCTCAAAAGAGCGGTGGACGGCGGCAATTGATCGGAAATAGGCCGCGGTGAGAATGACCGAGGGAAAAACAGCTTACAGTTGTTGCAGTGCATCAACGGCTCTTTTCCCGGCCACCGCCACACTGGAACAAAGAAGAGCTTCAGAACTTTTTCGTAGTCTACGAGATCGGCCGGTGAGTTGCAGCTTATGCATCGGCCGGCACCGGCTTTCAAGAGATGGCGGACTTGTTGCTCTAACCCTCCGACCAAGAAGAAGAACATTTTGTTTCGCGATTTGAGATTTTGGTAAAACGATGGGTCTCTGTTTATTTG

mRNA sequence

ATGCAACCCAACAGCTTGGTGAAATTTTTGACCCCTGCATCTGGTCTCCAAGGATACTGGGACCCATATCCAATCGACATGGAGTTTCGACCACCTTGTATGGTACTATCAACCATAGGGATTTCCAAGCCAGGAAAACTAGAAGGCCAAACTACAAGGGAATGCTCAACACATCTTCATCAACTTCATGTGTGCTTACCTTCAACAAGACATAAGACAAGACTACTCTATAGAATGTCACTGGATTTCGCTCCCATATTGAAGCATATTCCTTTCATGCACTATCTCTGGAGACATTTCGCAGAACAGGTATTGAATGAGGACTTGAGGCTTGTCATTGGACAGCAAGAAAGAATGCTCAACGGAGAAAACATCTGGAACATGCCAGTTTCTTATGATAAGCTAGGTGTAAGATATAGGCTATGGAGAAATGCAGTAGAGGAAGGAGCAAAACAACTACCCTTCAGCAAATCAAATTGAACAGTATCCAATCGTAATTAACTTGAAACACTTCTTAGGACCCATAAACAAGCCAAGCCCCCTTCATTTTTAGAACTCAAAATTGCAGATGAAAGACCCATGAGGCTGAGATAAGACCAACCTACCTCCCTTTCAGCTTCCACTTTTGATAAGAACACTTACAATCAAAACTCTACAGAAGCTGAAGAAGAAAATCATCTGAAAACAGAGAGAAGCCAGCTCTTGCCCCCTACAGAATCCCCTTGTAAATTAGAAACTGCTATATAAATTAAATCGGCTTTGTAAAAGTATTCGAGTACTCTTTGTTGTAAGCATCTTCTTCAATGATAAAGTAATGTTCAAAATTCATTCTCAATCAGATACCATTTCGATTACTTGCAAACAAAAACCATAAAAGATCACCGGACGATTTGAAACAAAAGTAAATTTACAGAGAAGAGCCACAGAAAGGGCAGAAGCTGAAATCGGGCTCCACTACTTTGTTACAGGAATGGCAACGAAGGGCCCTCAAAAGAGCGGTGGACGGCGGCAATTGATCGGAAATAGGCCGCGGTGAGAATGACCGAGGGAAAAACAGCTTACAGTTGTTGCAGTGCATCAACGGCTCTTTTCCCGGCCACCGCCACACTGGAACAAAGAAGAGCTTCAGAACTTTTTCGTAGTCTACGAGATCGGCCGGTGAGTTGCAGCTTATGCATCGGCCGGCACCGGCTTTCAAGAGATGGCGGACTTGTTGCTCTAACCCTCCGACCAAGAAGAAGAACATTTTGTTTCGCGATTTGAGATTTTGGTAAAACGATGGGTCTCTGTTTATTTG

Coding sequence (CDS)

ATGCAACCCAACAGCTTGGTGAAATTTTTGACCCCTGCATCTGGTCTCCAAGGATACTGGGACCCATATCCAATCGACATGGAGTTTCGACCACCTTGTATGGTACTATCAACCATAGGGATTTCCAAGCCAGGAAAACTAGAAGGCCAAACTACAAGGGAATGCTCAACACATCTTCATCAACTTCATGTGTGCTTACCTTCAACAAGACATAAGACAAGACTACTCTATAGAATGTCACTGGATTTCGCTCCCATATTGAAGCATATTCCTTTCATGCACTATCTCTGGAGACATTTCGCAGAACAGGTATTGAATGAGGACTTGAGGCTTGTCATTGGACAGCAAGAAAGAATGCTCAACGGAGAAAACATCTGGAACATGCCAGTTTCTTATGATAAGCTAGGTGTAAGATATAGGCTATGGAGAAATGCAGTAGAGGAAGGAGCAAAACAACTACCCTTCAGCAAATCAAATTGA

Protein sequence

MQPNSLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQTTRECSTHLHQLHVCLPSTRHKTRLLYRMSLDFAPILKHIPFMHYLWRHFAEQVLNEDLRLVIGQQERMLNGENIWNMPVSYDKLGVRYRLWRNAVEEGAKQLPFSKSN

Homology

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BLAST of Carg24437 vs. NCBI nr
Match: XP_022962444.1 (chlorophyllide a oxygenase, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 329.3 bits (843), Expect = 7.1e-87
Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 5   SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQTTRECSTHLHQLHV 64
           SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQTTRECSTHLHQLHV
Sbjct: 380 SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQTTRECSTHLHQLHV 439

Query: 65  CLPSTRHKTRLLYRMSLDFAPILKHIPFMHYLWRHFAEQVLNEDLRLVIGQQERMLNGEN 124
           CLPSTR KTRLLYRMSLDFAPILKHIPFMHYLWRHFAEQVLNEDLRLVIGQQERMLNGEN
Sbjct: 440 CLPSTRQKTRLLYRMSLDFAPILKHIPFMHYLWRHFAEQVLNEDLRLVIGQQERMLNGEN 499

Query: 125 IWNMPVSYDKLGVRYRLWRNAVEEGAKQLPFSKSN 160
           IWNMPVSYDKLGVRYRLWRNAVEEGAKQLPFSKSN
Sbjct: 500 IWNMPVSYDKLGVRYRLWRNAVEEGAKQLPFSKSN 534

[Close]

BLAST of Carg24437 vs. NCBI nr
Match: XP_022990515.1 (chlorophyllide a oxygenase, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 329.3 bits (843), Expect = 7.1e-87
Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 5   SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQTTRECSTHLHQLHV 64
           SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQTTRECSTHLHQLHV
Sbjct: 380 SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQTTRECSTHLHQLHV 439

Query: 65  CLPSTRHKTRLLYRMSLDFAPILKHIPFMHYLWRHFAEQVLNEDLRLVIGQQERMLNGEN 124
           CLPSTR KTRLLYRMSLDFAPILKHIPFMHYLWRHFAEQVLNEDLRLVIGQQERMLNGEN
Sbjct: 440 CLPSTRQKTRLLYRMSLDFAPILKHIPFMHYLWRHFAEQVLNEDLRLVIGQQERMLNGEN 499

Query: 125 IWNMPVSYDKLGVRYRLWRNAVEEGAKQLPFSKSN 160
           IWNMPVSYDKLGVRYRLWRNAVEEGAKQLPFSKSN
Sbjct: 500 IWNMPVSYDKLGVRYRLWRNAVEEGAKQLPFSKSN 534

[Close]

BLAST of Carg24437 vs. NCBI nr
Match: XP_023541912.1 (chlorophyllide a oxygenase, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 329.3 bits (843), Expect = 7.1e-87
Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 0


Query: 5   SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQTTRECSTHLHQLHV 64
           SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQTTRECSTHLHQLHV
Sbjct: 380 SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQTTRECSTHLHQLHV 439

Query: 65  CLPSTRHKTRLLYRMSLDFAPILKHIPFMHYLWRHFAEQVLNEDLRLVIGQQERMLNGEN 124
           CLPSTR KTRLLYRMSLDFAPILKHIPFMHYLWRHFAEQVLNEDLRLVIGQQERMLNGEN
Sbjct: 440 CLPSTRQKTRLLYRMSLDFAPILKHIPFMHYLWRHFAEQVLNEDLRLVIGQQERMLNGEN 499

Query: 125 IWNMPVSYDKLGVRYRLWRNAVEEGAKQLPFSKSN 160
           IWNMPVSYDKLGVRYRLWRNAVEEGAKQLPFSKSN
Sbjct: 500 IWNMPVSYDKLGVRYRLWRNAVEEGAKQLPFSKSN 534

[Close]

BLAST of Carg24437 vs. NCBI nr
Match: XP_022992995.1 (chlorophyllide a oxygenase, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 323.9 bits (829), Expect = 3.0e-85
Identity = 151/155 (97.42%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 5   SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQTTRECSTHLHQLHV 64
           SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQTTRECSTHLHQLHV
Sbjct: 380 SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQTTRECSTHLHQLHV 439

Query: 65  CLPSTRHKTRLLYRMSLDFAPILKHIPFMHYLWRHFAEQVLNEDLRLVIGQQERMLNGEN 124
           CLPSTR KTRLLYRMSLDFAP+LK+IPFMHYLWRHFAEQVLNEDLRLVIGQQERMLNG N
Sbjct: 440 CLPSTRQKTRLLYRMSLDFAPVLKNIPFMHYLWRHFAEQVLNEDLRLVIGQQERMLNGAN 499

Query: 125 IWNMPVSYDKLGVRYRLWRNAVEEGAKQLPFSKSN 160
           IWNMPVSYDKLGVRYRLWRNAVEEGAKQLPFSKSN
Sbjct: 500 IWNMPVSYDKLGVRYRLWRNAVEEGAKQLPFSKSN 534

[Close]

BLAST of Carg24437 vs. NCBI nr
Match: XP_023550890.1 (chlorophyllide a oxygenase, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 321.2 bits (822), Expect = 1.9e-84
Identity = 149/155 (96.13%), Postives = 153/155 (98.71%), Query Frame = 0


Query: 5   SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQTTRECSTHLHQLHV 64
           SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ+TRECSTHLHQLHV
Sbjct: 380 SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQSTRECSTHLHQLHV 439

Query: 65  CLPSTRHKTRLLYRMSLDFAPILKHIPFMHYLWRHFAEQVLNEDLRLVIGQQERMLNGEN 124
           CLPSTR KTRLLYRMSLDFAP+LK+IPFMHYLWRHFAEQVLNEDLRLVIGQQERMLNG N
Sbjct: 440 CLPSTRQKTRLLYRMSLDFAPVLKNIPFMHYLWRHFAEQVLNEDLRLVIGQQERMLNGAN 499

Query: 125 IWNMPVSYDKLGVRYRLWRNAVEEGAKQLPFSKSN 160
           IWNMPVSYDKLGVRYR+WRNAVEEGAKQLPFSKSN
Sbjct: 500 IWNMPVSYDKLGVRYRVWRNAVEEGAKQLPFSKSN 534

[Close]

BLAST of Carg24437 vs. TAIR10
Match: AT1G44446.1 (Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain)

HSP 1 Score: 287.0 bits (733), Expect = 7.3e-78
Identity = 128/152 (84.21%), Postives = 146/152 (96.05%), Query Frame = 0


Query: 5   SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQTTRECSTHLHQLHV 64
           SLVKFLTP SGLQGYWDPYPIDMEF+PPC+VLSTIGISKPGKLEG++T++C+THLHQLHV
Sbjct: 384 SLVKFLTPTSGLQGYWDPYPIDMEFKPPCIVLSTIGISKPGKLEGKSTQQCATHLHQLHV 443

Query: 65  CLPSTRHKTRLLYRMSLDFAPILKHIPFMHYLWRHFAEQVLNEDLRLVIGQQERMLNGEN 124
           CLPS+++KTRLLYRMSLDFAPILK++PFM +LWRHFAEQVLNEDLRLV+GQQERMLNG N
Sbjct: 444 CLPSSKNKTRLLYRMSLDFAPILKNLPFMEHLWRHFAEQVLNEDLRLVLGQQERMLNGAN 503

Query: 125 IWNMPVSYDKLGVRYRLWRNAVEEGAKQLPFS 157
           IWN+PV+YDKLGVRYRLWRNAV+ G  +LPFS
Sbjct: 504 IWNLPVAYDKLGVRYRLWRNAVDRGDDKLPFS 535

[Close]

BLAST of Carg24437 vs. Swiss-Prot
Match: sp|Q8S7E1|CAO_ORYSJ (Chlorophyllide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CAO PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 4.5e-77
Identity = 126/155 (81.29%), Postives = 145/155 (93.55%), Query Frame = 0


Query: 5   SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQTTRECSTHLHQLHV 64
           SLVKFLTP+SGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEG++T++CSTHLHQLH+
Sbjct: 383 SLVKFLTPSSGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGKSTKQCSTHLHQLHI 442

Query: 65  CLPSTRHKTRLLYRMSLDFAPILKHIPFMHYLWRHFAEQVLNEDLRLVIGQQERMLNGEN 124
           CLPS+R+KTRLLYRMSLDFAP +KH+PFMH LW HFAE+VLNEDLRLV+GQQERM+NG N
Sbjct: 443 CLPSSRNKTRLLYRMSLDFAPWIKHVPFMHILWSHFAEKVLNEDLRLVLGQQERMINGAN 502

Query: 125 IWNMPVSYDKLGVRYRLWRNAVEEGAKQLPFSKSN 160
           +WN PVSYDKLG+RYRLWR+A+E G  +LPFS  +
Sbjct: 503 VWNWPVSYDKLGIRYRLWRDAIERGVDRLPFSNQS 537

[Close]

BLAST of Carg24437 vs. Swiss-Prot
Match: sp|Q9MBA1|CAO_ARATH (Chlorophyllide a oxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CAO PE=1 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 1.3e-76
Identity = 128/152 (84.21%), Postives = 146/152 (96.05%), Query Frame = 0


Query: 5   SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQTTRECSTHLHQLHV 64
           SLVKFLTP SGLQGYWDPYPIDMEF+PPC+VLSTIGISKPGKLEG++T++C+THLHQLHV
Sbjct: 384 SLVKFLTPTSGLQGYWDPYPIDMEFKPPCIVLSTIGISKPGKLEGKSTQQCATHLHQLHV 443

Query: 65  CLPSTRHKTRLLYRMSLDFAPILKHIPFMHYLWRHFAEQVLNEDLRLVIGQQERMLNGEN 124
           CLPS+++KTRLLYRMSLDFAPILK++PFM +LWRHFAEQVLNEDLRLV+GQQERMLNG N
Sbjct: 444 CLPSSKNKTRLLYRMSLDFAPILKNLPFMEHLWRHFAEQVLNEDLRLVLGQQERMLNGAN 503

Query: 125 IWNMPVSYDKLGVRYRLWRNAVEEGAKQLPFS 157
           IWN+PV+YDKLGVRYRLWRNAV+ G  +LPFS
Sbjct: 504 IWNLPVAYDKLGVRYRLWRNAVDRGDDKLPFS 535

[Close]

BLAST of Carg24437 vs. Swiss-Prot
Match: sp|Q9ZWM5|CAO_CHLRE (Chlorophyllide a oxygenase, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=CAO PE=2 SV=2)

HSP 1 Score: 186.8 bits (473), Expect = 1.9e-46
Identity = 82/132 (62.12%), Postives = 101/132 (76.52%), Query Frame = 0


Query: 16  LQGYWDPYPIDMEFRPPCMVLSTIGISKPGK-LEGQTTRECSTHLHQLHVCLPSTRHKTR 75
           L G+WDPYPIDM F+PPCM LSTIG+++PGK + G T  +C  HLHQLHVC+PS +  TR
Sbjct: 480 LSGFWDPYPIDMAFQPPCMTLSTIGLAQPGKIMRGVTASQCKNHLHQLHVCMPSKKGHTR 539

Query: 76  LLYRMSLDFAPILKHIPFMHYLWRHFAEQVLNEDLRLVIGQQERMLNGENIWNMPVSYDK 135
           LLYRMSLDF P ++H+PF+  +W+  A QVL EDL LV+GQQ+RML G + W+ P  YDK
Sbjct: 540 LLYRMSLDFLPWMRHVPFIDRIWKQVAAQVLGEDLVLVLGQQDRMLRGGSNWSNPAPYDK 599

Query: 136 LGVRYRLWRNAV 147
           L VRYR WRN V
Sbjct: 600 LAVRYRRWRNGV 611

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BLAST of Carg24437 vs. Swiss-Prot
Match: sp|Q9XJ38|CAO_DUNSA (Chlorophyllide a oxygenase, chloroplastic OS=Dunaliella salina OX=3046 GN=CAO PE=2 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 6.6e-44
Identity = 82/135 (60.74%), Postives = 96/135 (71.11%), Query Frame = 0


Query: 16  LQGYWDPYPIDMEFRPPCMVLSTIGISKPGK-LEGQTTRECSTHLHQLHVCLPSTRHKTR 75
           L G WDPYPI M F PPC+ LSTIG+S+PGK + G    EC  HLHQLHVC+PS    TR
Sbjct: 309 LAGDWDPYPISMSFNPPCIALSTIGLSQPGKIMRGYKAEECKRHLHQLHVCMPSKEGHTR 368

Query: 76  LLYRMSLDFAPILKHIPFMHYLWRHFAEQVLNEDLRLVIGQQERMLNGENIWNMPVSYDK 135
           LLYRMSLDF    KH+PF+  LW+  A QVL EDL LV+GQQ RM+ G++ W  P+ YDK
Sbjct: 369 LLYRMSLDFWGWAKHVPFVDVLWKKIAGQVLGEDLVLVLGQQARMIGGDDTWCTPMPYDK 428

Query: 136 LGVRYRLWRNAVEEG 150
           L VRYR WRN V +G
Sbjct: 429 LAVRYRRWRNMVADG 443

[Close]

BLAST of Carg24437 vs. TrEMBL
Match: tr|A0A1S3CRX3|A0A1S3CRX3_CUCME (chlorophyllide a oxygenase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103504061 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 2.4e-83
Identity = 147/154 (95.45%), Postives = 151/154 (98.05%), Query Frame = 0


Query: 5   SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQTTRECSTHLHQLHV 64
           SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ+TRECSTHLHQLHV
Sbjct: 380 SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQSTRECSTHLHQLHV 439

Query: 65  CLPSTRHKTRLLYRMSLDFAPILKHIPFMHYLWRHFAEQVLNEDLRLVIGQQERMLNGEN 124
           CLPSTR KTRLLYRMSLDFAP+LK IPFMHYLWRHFAEQVLNEDLRLVIGQQERM+NG N
Sbjct: 440 CLPSTRQKTRLLYRMSLDFAPVLKQIPFMHYLWRHFAEQVLNEDLRLVIGQQERMVNGAN 499

Query: 125 IWNMPVSYDKLGVRYRLWRNAVEEGAKQLPFSKS 159
           IWNMPVSYDKLGVRYRLWRNAVEEGAKQLPFS+S
Sbjct: 500 IWNMPVSYDKLGVRYRLWRNAVEEGAKQLPFSQS 533

[Close]

BLAST of Carg24437 vs. TrEMBL
Match: tr|A0A0A0KIX0|A0A0A0KIX0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G385090 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 5.4e-83
Identity = 146/154 (94.81%), Postives = 151/154 (98.05%), Query Frame = 0


Query: 5   SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQTTRECSTHLHQLHV 64
           SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ+TRECSTHLHQLHV
Sbjct: 380 SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQSTRECSTHLHQLHV 439

Query: 65  CLPSTRHKTRLLYRMSLDFAPILKHIPFMHYLWRHFAEQVLNEDLRLVIGQQERMLNGEN 124
           CLPSTR KTRLLYRMSLDFAP+LK IPFMHYLWRHFAEQVLNEDLRLVIGQQERM+NG N
Sbjct: 440 CLPSTRQKTRLLYRMSLDFAPVLKQIPFMHYLWRHFAEQVLNEDLRLVIGQQERMVNGAN 499

Query: 125 IWNMPVSYDKLGVRYRLWRNAVEEGAKQLPFSKS 159
           IWNMPVSYDKLGVRYRLWRNAVEEGAKQLPFS++
Sbjct: 500 IWNMPVSYDKLGVRYRLWRNAVEEGAKQLPFSET 533

[Close]

BLAST of Carg24437 vs. TrEMBL
Match: tr|A0A2K2AI93|A0A2K2AI93_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G178300v3 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 2.7e-82
Identity = 141/154 (91.56%), Postives = 151/154 (98.05%), Query Frame = 0


Query: 5   SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQTTRECSTHLHQLHV 64
           SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ+TREC+THLHQLHV
Sbjct: 381 SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQSTRECATHLHQLHV 440

Query: 65  CLPSTRHKTRLLYRMSLDFAPILKHIPFMHYLWRHFAEQVLNEDLRLVIGQQERMLNGEN 124
           CLPS+RHKTRLLYRMSLDFAP+LKH+PFMHYLWRHFAEQVLNEDLRLV+GQQERM+NG N
Sbjct: 441 CLPSSRHKTRLLYRMSLDFAPVLKHVPFMHYLWRHFAEQVLNEDLRLVLGQQERMINGAN 500

Query: 125 IWNMPVSYDKLGVRYRLWRNAVEEGAKQLPFSKS 159
           +WN PVSYDKLGVRYRLWR+AVE+GAKQLPF KS
Sbjct: 501 VWNWPVSYDKLGVRYRLWRDAVEKGAKQLPFEKS 534

[Close]

BLAST of Carg24437 vs. TrEMBL
Match: tr|A0A067KKL7|A0A067KKL7_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_12097 PE=4 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 5.9e-82
Identity = 140/154 (90.91%), Postives = 152/154 (98.70%), Query Frame = 0


Query: 5   SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQTTRECSTHLHQLHV 64
           S+VKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ+T++C+THLHQLHV
Sbjct: 380 SMVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQSTKQCATHLHQLHV 439

Query: 65  CLPSTRHKTRLLYRMSLDFAPILKHIPFMHYLWRHFAEQVLNEDLRLVIGQQERMLNGEN 124
           CLPS+R KTRLLYRMSLDFAP+LKHIPFMHYLWRHFAEQVLNEDLRLV+GQQERM+NGEN
Sbjct: 440 CLPSSRQKTRLLYRMSLDFAPVLKHIPFMHYLWRHFAEQVLNEDLRLVLGQQERMINGEN 499

Query: 125 IWNMPVSYDKLGVRYRLWRNAVEEGAKQLPFSKS 159
           +WN+PVSYDKLGVRYRLWR+AVE GAKQLPFSKS
Sbjct: 500 VWNLPVSYDKLGVRYRLWRDAVERGAKQLPFSKS 533

[Close]

BLAST of Carg24437 vs. TrEMBL
Match: tr|A0A0B0N5V0|A0A0B0N5V0_GOSAR (Chlorophyllide a oxygenase, chloroplastic-like protein OS=Gossypium arboreum OX=29729 GN=F383_02447 PE=4 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 6.5e-81
Identity = 138/153 (90.20%), Postives = 151/153 (98.69%), Query Frame = 0


Query: 5   SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQTTRECSTHLHQLHV 64
           SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQ+T+EC+THLHQLHV
Sbjct: 382 SLVKFLTPASGLQGYWDPYPIDMEFRPPCMVLSTIGISKPGKLEGQSTKECTTHLHQLHV 441

Query: 65  CLPSTRHKTRLLYRMSLDFAPILKHIPFMHYLWRHFAEQVLNEDLRLVIGQQERMLNGEN 124
           C+PS+R+KTRLLYRMSLDFAP+LKHIPFMHYLWRHFAEQVLNEDLRLVIGQQERM+NG N
Sbjct: 442 CIPSSRNKTRLLYRMSLDFAPVLKHIPFMHYLWRHFAEQVLNEDLRLVIGQQERMINGAN 501

Query: 125 IWNMPVSYDKLGVRYRLWRNAVEEGAKQLPFSK 158
           +WN+PV+YDKLGVRYRLWRNAV++G KQLPFSK
Sbjct: 502 VWNLPVAYDKLGVRYRLWRNAVDQGDKQLPFSK 534

The following BLAST results are available for this feature:

BLAST of Carg24437 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022962444.1	7.1e-87	99.35	chlorophyllide a oxygenase, chloroplastic-like [Cucurbita moschata]	[more]
XP_022990515.1	7.1e-87	99.35	chlorophyllide a oxygenase, chloroplastic-like [Cucurbita maxima]	[more]
XP_023541912.1	7.1e-87	99.35	chlorophyllide a oxygenase, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]
XP_022992995.1	3.0e-85	97.42	chlorophyllide a oxygenase, chloroplastic-like [Cucurbita maxima]	[more]
XP_023550890.1	1.9e-84	96.13	chlorophyllide a oxygenase, chloroplastic-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg24437 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G44446.1	7.3e-78	84.21	Pheophorbide a oxygenase family protein with Rieske [2Fe-2S] domain	[more]

BLAST of Carg24437 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8S7E1\|CAO_ORYSJ	4.5e-77	81.29	Chlorophyllide a oxygenase, chloroplastic OS=Oryza sativa subsp. japonica OX=399...	[more]
sp\|Q9MBA1\|CAO_ARATH	1.3e-76	84.21	Chlorophyllide a oxygenase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CAO...	[more]
sp\|Q9ZWM5\|CAO_CHLRE	1.9e-46	62.12	Chlorophyllide a oxygenase, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 G...	[more]
sp\|Q9XJ38\|CAO_DUNSA	6.6e-44	60.74	Chlorophyllide a oxygenase, chloroplastic OS=Dunaliella salina OX=3046 GN=CAO PE...	[more]

BLAST of Carg24437 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CRX3\|A0A1S3CRX3_CUCME	2.4e-83	95.45	chlorophyllide a oxygenase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC10350406...	[more]
tr\|A0A0A0KIX0\|A0A0A0KIX0_CUCSA	5.4e-83	94.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G385090 PE=4 SV=1	[more]
tr\|A0A2K2AI93\|A0A2K2AI93_POPTR	2.7e-82	91.56	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G178300v3 PE=...	[more]
tr\|A0A067KKL7\|A0A067KKL7_JATCU	5.9e-82	90.91	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_12097 PE=4 SV=1	[more]
tr\|A0A0B0N5V0\|A0A0B0N5V0_GOSAR	6.5e-81	90.20	Chlorophyllide a oxygenase, chloroplastic-like protein OS=Gossypium arboreum OX=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0010277	chlorophyllide a oxygenase [overall] activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **INTERPRO**
Term	Definition
IPR013626	PaO

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0010277	chlorophyllide a oxygenase [overall] activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24437-RA	Carg24437-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.30.530.90		coord: 2..153 e-value: 2.8E-6 score: 29.0
None	No IPR available	PANTHER	PTHR21266:SF19	SUBFAMILY NOT NAMED	coord: 5..156
None	No IPR available	PANTHER	PTHR21266	IRON-SULFUR DOMAIN CONTAINING PROTEIN	coord: 5..156
None	No IPR available	SUPERFAMILY	SSF55961	Bet v1-like	coord: 20..146
IPR013626	Pheophorbide a oxygenase	PFAM	PF08417	PaO	coord: 29..123 e-value: 2.2E-14 score: 53.2

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24437	Csa6G385090	Cucumber (Chinese Long) v2	carcuB0478
Carg24437	MELO3C010614	Melon (DHL92) v3.5.1	carmeB0451
Carg24437	CSPI06G20380	Wild cucumber (PI 183967)	carcpiB0483
Carg24437	Cucsa.188130	Cucumber (Gy14) v1	carcgyB0515
Carg24437	CmaCh04G023630	Cucurbita maxima (Rimu)	carcmaB0621
Carg24437	CmaCh15G006760	Cucurbita maxima (Rimu)	carcmaB0620
Carg24437	Lsi08G004360	Bottle gourd (USVL1VR-Ls)	carlsiB407
Carg24437	CsGy6G019830	Cucumber (Gy14) v2	carcgybB0456
Carg24437	MELO3C010614.2	Melon (DHL92) v3.6.1	carmedB0454
Carg24437	Bhi04G001517	Wax gourd	carwgoB0538

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg24437	Watermelon (97103) v2	carwmbB0468
Carg24437	Watermelon (97103) v2	carwmbB0469
Carg24437	Wax gourd	carwgoB0540
Carg24437	Silver-seed gourd	carcarB451
Carg24437	Cucumber (Gy14) v2	carcgybB0455
Carg24437	Cucurbita maxima (Rimu)	carcmaB0619
Carg24437	Cucurbita moschata (Rifu)	carcmoB0602
Carg24437	Cucurbita moschata (Rifu)	carcmoB0603
Carg24437	Cucurbita moschata (Rifu)	carcmoB0604
Carg24437	Cucurbita pepo (Zucchini)	carcpeB0626
Carg24437	Cucurbita pepo (Zucchini)	carcpeB0627
Carg24437	Cucurbita pepo (Zucchini)	carcpeB0628
Carg24437	Wild cucumber (PI 183967)	carcpiB0482
Carg24437	Cucumber (Chinese Long) v2	carcuB0477
Carg24437	Cucumber (Chinese Long) v3	carcucB0479
Carg24437	Cucumber (Chinese Long) v3	carcucB0480
Carg24437	Bottle gourd (USVL1VR-Ls)	carlsiB406
Carg24437	Melon (DHL92) v3.5.1	carmeB0452
Carg24437	Melon (DHL92) v3.6.1	carmedB0455
Carg24437	Watermelon (Charleston Gray)	carwcgB0437
Carg24437	Watermelon (Charleston Gray)	carwcgB0438
Carg24437	Watermelon (97103) v1	carwmB0445
Carg24437	Watermelon (97103) v1	carwmB0446