Carg24352 (gene) Silver-seed gourd

Overview
NameCarg24352
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionzinc finger protein ZAT11
LocationCucurbita_argyrosperma_scaffold_298 : 147851 .. 148336 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCTAAGAGAATCCGACAAGAATTTGAAGCCTCCGACATCGCCAAATCTTTAATGCTTCTTTCTCAGACATCCAACTCCAAAATTCCCGGACAAAACGCCGCCGTTTTCCAGTGCAAAACCTGCAACCGGCTCTTCTCTTCGTTTCAGGCTCTCGGCGGCCACCGTGCCAGCCACAAACGCCCACGAACGGCGGCTGACGAACCGAAGGATGCGGCGGAATCAAAGAAAATGCACGAGTGTGGACTGTGCGGGCAGGTGTTCTCTACCGGGCAGGCTCTCGGCGGGCACATGCGGCGGCACCGGATGACGACGACGAACGGAGGTGGGTTTTCGGTGGTGCCGGCGGTGGAGAAGATTCCGGTGCTGAACAGGTCCGGGAGTATGGGAGTTAAGTGCTTGGATCTTAATTTGACGCCATTGGAGAATGACTTGAAGCTCCTATTTGGACAAATGGCTCCAAGAGTTGATCTTGTTCTTTGA

mRNA sequence

ATGGCGGCTAAGAGAATCCGACAAGAATTTGAAGCCTCCGACATCGCCAAATCTTTAATGCTTCTTTCTCAGACATCCAACTCCAAAATTCCCGGACAAAACGCCGCCGTTTTCCAGTGCAAAACCTGCAACCGGCTCTTCTCTTCGTTTCAGGCTCTCGGCGGCCACCGTGCCAGCCACAAACGCCCACGAACGGCGGCTGACGAACCGAAGGATGCGGCGGAATCAAAGAAAATGCACGAGTGTGGACTGTGCGGGCAGGTGTTCTCTACCGGGCAGGCTCTCGGCGGGCACATGCGGCGGCACCGGATGACGACGACGAACGGAGGTGGGTTTTCGGTGGTGCCGGCGGTGGAGAAGATTCCGGTGCTGAACAGGTCCGGGAGTATGGGAGTTAAGTGCTTGGATCTTAATTTGACGCCATTGGAGAATGACTTGAAGCTCCTATTTGGACAAATGGCTCCAAGAGTTGATCTTGTTCTTTGA

Coding sequence (CDS)

ATGGCGGCTAAGAGAATCCGACAAGAATTTGAAGCCTCCGACATCGCCAAATCTTTAATGCTTCTTTCTCAGACATCCAACTCCAAAATTCCCGGACAAAACGCCGCCGTTTTCCAGTGCAAAACCTGCAACCGGCTCTTCTCTTCGTTTCAGGCTCTCGGCGGCCACCGTGCCAGCCACAAACGCCCACGAACGGCGGCTGACGAACCGAAGGATGCGGCGGAATCAAAGAAAATGCACGAGTGTGGACTGTGCGGGCAGGTGTTCTCTACCGGGCAGGCTCTCGGCGGGCACATGCGGCGGCACCGGATGACGACGACGAACGGAGGTGGGTTTTCGGTGGTGCCGGCGGTGGAGAAGATTCCGGTGCTGAACAGGTCCGGGAGTATGGGAGTTAAGTGCTTGGATCTTAATTTGACGCCATTGGAGAATGACTTGAAGCTCCTATTTGGACAAATGGCTCCAAGAGTTGATCTTGTTCTTTGA

Protein sequence

MAAKRIRQEFEASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASHKRPRTAADEPKDAAESKKMHECGLCGQVFSTGQALGGHMRRHRMTTTNGGGFSVVPAVEKIPVLNRSGSMGVKCLDLNLTPLENDLKLLFGQMAPRVDLVL
Homology
[Close]
BLAST of Carg24352 vs. NCBI nr
Match: XP_022962800.1 (zinc finger protein ZAT11-like [Cucurbita moschata])

HSP 1 Score: 235.7 bits (600), Expect = 1.1e-58
Identity = 161/161 (100.00%), Postives = 161/161 (100.00%), Query Frame = 0 

Query: 1   MAAKRIRQEFEASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASH 60
           MAAKRIRQEFEASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASH
Sbjct: 1   MAAKRIRQEFEASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASH 60

Query: 61  KRPRTAADEPKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGGFSVVPAVEK 120
           KRPRTAADEPKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGGFSVVPAVEK
Sbjct: 61  KRPRTAADEPKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGGFSVVPAVEK 120

Query: 121 IPVLNRSGSMGVKCLDLNLTPLENDLKLLFGQMAPRVDLVL 162
           IPVLNRSGSMGVKCLDLNLTPLENDLKLLFGQMAPRVDLVL
Sbjct: 121 IPVLNRSGSMGVKCLDLNLTPLENDLKLLFGQMAPRVDLVL 161

[Close]
BLAST of Carg24352 vs. NCBI nr
Match: XP_023517898.1 (zinc finger protein ZAT11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 234.2 bits (596), Expect = 3.1e-58
Identity = 160/161 (99.38%), Postives = 161/161 (100.00%), Query Frame = 0 

Query: 1   MAAKRIRQEFEASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASH 60
           MAAKRIRQEFEASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASH
Sbjct: 1   MAAKRIRQEFEASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASH 60

Query: 61  KRPRTAADEPKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGGFSVVPAVEK 120
           KRPRTAADEPKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGGFSVVPAVEK
Sbjct: 61  KRPRTAADEPKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGGFSVVPAVEK 120

Query: 121 IPVLNRSGSMGVKCLDLNLTPLENDLKLLFGQMAPRVDLVL 162
           IPVLNRSGSMGVKCLDLNLTPLENDLKLLFG+MAPRVDLVL
Sbjct: 121 IPVLNRSGSMGVKCLDLNLTPLENDLKLLFGKMAPRVDLVL 161

[Close]
BLAST of Carg24352 vs. NCBI nr
Match: XP_022972734.1 (zinc finger protein ZAT11-like [Cucurbita maxima])

HSP 1 Score: 223.0 bits (567), Expect = 7.2e-55
Identity = 157/164 (95.73%), Postives = 159/164 (96.95%), Query Frame = 0 

Query: 1   MAAKRIRQEFEASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASH 60
           MAAKRIRQEFEASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASH
Sbjct: 1   MAAKRIRQEFEASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASH 60

Query: 61  KRPRTAADEPKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGGFSV---VPA 120
           KRPRTAA+EPKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGGFSV   VPA
Sbjct: 61  KRPRTAAEEPKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGGFSVVPLVPA 120

Query: 121 VEKIPVLNRSGSMGVKCLDLNLTPLENDLKLLFGQMAPRVDLVL 162
           VEKIPVL RSGSMGV CLDLNLTPLENDLKLLFG+MAPRVDLVL
Sbjct: 121 VEKIPVLKRSGSMGVNCLDLNLTPLENDLKLLFGKMAPRVDLVL 164

[Close]
BLAST of Carg24352 vs. NCBI nr
Match: XP_023545102.1 (zinc finger protein ZAT11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 157.5 bits (397), Expect = 3.7e-35
Identity = 113/164 (68.90%), Postives = 127/164 (77.44%), Query Frame = 0 

Query: 1   MAAKRIRQEFEASDIAKSLMLLS---QTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHR 60
           MAAKRIRQEFEA+D+AKS M +S   ++SN  IP QNA+VF+CKTCNR FSSFQALGGHR
Sbjct: 1   MAAKRIRQEFEATDMAKSPMFISYGIESSNPIIPFQNASVFECKTCNRHFSSFQALGGHR 60

Query: 61  ASHKRPRTAADEPKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGGFSVVPA 120
           ASHKRPRT A++PK+              XXXXXXXXXXXXXXXXXXXXX     + VP 
Sbjct: 61  ASHKRPRTTAEDPKE-------AVDLKHKXXXXXXXXXXXXXXXXXXXXXXXXXXTAVP- 120

Query: 121 VEKIPVLNRSGSMGVKCLDLNLTPLENDLKLLFGQMAPRVDLVL 162
            EKIPVL RSGS  + CLDLNLTPLENDLK+LFG+MAP VDLVL
Sbjct: 121 -EKIPVLKRSGSRRIMCLDLNLTPLENDLKMLFGKMAPTVDLVL 155

[Close]
BLAST of Carg24352 vs. NCBI nr
Match: XP_022977880.1 (zinc finger protein ZAT11-like [Cucurbita maxima])

HSP 1 Score: 157.1 bits (396), Expect = 4.9e-35
Identity = 113/164 (68.90%), Postives = 125/164 (76.22%), Query Frame = 0 

Query: 1   MAAKRIRQEFEASDIAKSLMLLS---QTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHR 60
           MAAKRIR+EFE SD+AKS M +S   + SN  IP QNA+VF+CKTCNR FSSFQALGGHR
Sbjct: 1   MAAKRIREEFEVSDMAKSRMFISYGIEPSNPIIPFQNASVFECKTCNRHFSSFQALGGHR 60

Query: 61  ASHKRPRTAADEPKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGGFSVVPA 120
           ASHKRPRT A++PK+              XXXXXXXXXXXXXXXXXXXXX     + VP 
Sbjct: 61  ASHKRPRTTAEDPKE-------PVDLKHKXXXXXXXXXXXXXXXXXXXXXXXXXXTAVP- 120

Query: 121 VEKIPVLNRSGSMGVKCLDLNLTPLENDLKLLFGQMAPRVDLVL 162
            EKIPVL RSGS  + CLDLNLTPLENDLK+LFGQMAP VDLVL
Sbjct: 121 -EKIPVLKRSGSRRIMCLDLNLTPLENDLKMLFGQMAPTVDLVL 155

[Close]
BLAST of Carg24352 vs. TAIR10
Match: AT2G37430.1 (C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 94.7 bits (234), Expect = 5.4e-20
Identity = 90/174 (51.72%), Postives = 109/174 (62.64%), Query Frame = 0 

Query: 4   KRIRQEFEAS----DIAKSLMLLSQTSNSKIPGQN-------AAVFQCKTCNRLFSSFQA 63
           KR R +FE S    DIAK LM+L+QTS  K  G N       +  F+CKTCN+ FSSFQA
Sbjct: 2   KRERSDFEESLKNIDIAKCLMILAQTSMVKQIGLNQHTESHTSNQFECKTCNKRFSSFQA 61

Query: 64  LGGHRASHKRPRTAADEPKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGGF 123
           LGGHRASHK+P+    E KD             XXXXXXXXXXXXXXXXXXXXXX     
Sbjct: 62  LGGHRASHKKPKLTV-EQKDVKHLSNDYKGNHFXXXXXXXXXXXXXXXXXXXXXXXXXSM 121

Query: 124 SVVPA-----VEKIPVLNRSG-SMGVKCLDLNLTPLENDLKLLFGQ-MAPRVDL 160
           +V P+     +  +PVL R G S  +  LDLNLTPLENDL+ +FG+   P++D+
Sbjct: 122 TVEPSFISPMIPSMPVLKRCGSSKRILSLDLNLTPLENDLEYIFGKTFVPKIDM 174

[Close]
BLAST of Carg24352 vs. TAIR10
Match: AT3G53600.1 (C2H2-type zinc finger family protein)

HSP 1 Score: 86.3 bits (212), Expect = 1.9e-17
Identity = 100/173 (57.80%), Postives = 119/173 (68.79%), Query Frame = 0 

Query: 4   KRIRQEFEAS----DIAKSLMLLS-----------QTSNSKIPGQNAAVFQCKTCNRLFS 63
           KR R ++E S    DI +SLM+LS           Q++ SK    N   F+CKTCNR F 
Sbjct: 2   KRDRSDYEESMKHIDIVESLMMLSRSFVVKQIDVKQSTGSKTNHNNH--FECKTCNRKFD 61

Query: 64  SFQALGGHRASHKRPRTAADEPKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN 123
           SFQALGGHRASHK+P+   D+ +  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 
Sbjct: 62  SFQALGGHRASHKKPKLIVDQEQVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXM 121

Query: 124 GGGFSVVPA-VEKIPVLNRSGSMGVKCLDLNLTPLENDLKLLFGQ-MAPRVDL 160
               S+VP+ V   PV NR  S   + LDLNLTPLENDL L+FG+ + P++DL
Sbjct: 122 ITEQSIVPSVVYSRPVFNRCSS-SKEILDLNLTPLENDLVLIFGKNLVPQIDL 171

[Close]
BLAST of Carg24352 vs. TAIR10
Match: AT2G28200.1 (C2H2-type zinc finger family protein)

HSP 1 Score: 66.2 bits (160), Expect = 2.1e-11
Identity = 30/49 (61.22%), Postives = 40/49 (81.63%), Query Frame = 0 

Query: 23  SQTSNSKIPGQNAA--VFQCKTCNRLFSSFQALGGHRASHKRPRTAADE 70
           S+  + KI  +N++  V++CKTCNR FSSFQALGGHRASHK+PRT+ +E
Sbjct: 98  SRKIHQKISSENSSFYVYECKTCNRTFSSFQALGGHRASHKKPRTSTEE 146

[Close]
BLAST of Carg24352 vs. TAIR10
Match: AT2G28710.1 (C2H2-type zinc finger family protein)

HSP 1 Score: 57.4 bits (137), Expect = 9.5e-09
Identity = 80/155 (51.61%), Postives = 93/155 (60.00%), Query Frame = 0 

Query: 4   KRIRQEFE-ASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASHKR 63
           +R R + E  +++A  L+LLS+   +      + VF CKTCN+ F SFQALGGHRASH+R
Sbjct: 2   ERGRSDMEMINNMANCLILLSKAHQN---DTKSRVFACKTCNKEFPSFQALGGHRASHRR 61

Query: 64  PRT----AADEPKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGGFSVVPAV 123
                  A   PK      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         A 
Sbjct: 62  SAALEGHAPPSPKRVKPVKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAP 121

Query: 124 EKIPVLNRSGSMGVKCLDLNLTPLEN-DLKLLFGQ 153
             +          V CLDLNLTPLEN DLKL  G+
Sbjct: 122 VTMKKSGGGNGKRVLCLDLNLTPLENEDLKLELGR 153

[Close]
BLAST of Carg24352 vs. TAIR10
Match: AT5G59820.1 (C2H2-type zinc finger family protein)

HSP 1 Score: 57.0 bits (136), Expect = 1.2e-08
Identity = 29/53 (54.72%), Postives = 33/53 (62.26%), Query Frame = 0 

Query: 16 AKSLMLLSQTSNSKIP-GQNAAVFQCKTCNRLFSSFQALGGHRASHKRPRTAA 68
          A  LMLLS+     +  G    VF CKTC + F SFQALGGHRASHK+P   A
Sbjct: 16 ANCLMLLSRVGQENVDGGDQKRVFTCKTCLKQFHSFQALGGHRASHKKPNNDA 68

[Close]
BLAST of Carg24352 vs. Swiss-Prot
Match: sp|Q9SLD4|ZAT11_ARATH (Zinc finger protein ZAT11 OS=Arabidopsis thaliana OX=3702 GN=ZAT11 PE=2 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 9.7e-19
Identity = 90/174 (51.72%), Postives = 109/174 (62.64%), Query Frame = 0 

Query: 4   KRIRQEFEAS----DIAKSLMLLSQTSNSKIPGQN-------AAVFQCKTCNRLFSSFQA 63
           KR R +FE S    DIAK LM+L+QTS  K  G N       +  F+CKTCN+ FSSFQA
Sbjct: 2   KRERSDFEESLKNIDIAKCLMILAQTSMVKQIGLNQHTESHTSNQFECKTCNKRFSSFQA 61

Query: 64  LGGHRASHKRPRTAADEPKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGGF 123
           LGGHRASHK+P+    E KD             XXXXXXXXXXXXXXXXXXXXXX     
Sbjct: 62  LGGHRASHKKPKLTV-EQKDVKHLSNDYKGNHFXXXXXXXXXXXXXXXXXXXXXXXXXSM 121

Query: 124 SVVPA-----VEKIPVLNRSG-SMGVKCLDLNLTPLENDLKLLFGQ-MAPRVDL 160
           +V P+     +  +PVL R G S  +  LDLNLTPLENDL+ +FG+   P++D+
Sbjct: 122 TVEPSFISPMIPSMPVLKRCGSSKRILSLDLNLTPLENDLEYIFGKTFVPKIDM 174

[Close]
BLAST of Carg24352 vs. Swiss-Prot
Match: sp|Q681X4|ZAT5_ARATH (Zinc finger protein ZAT5 OS=Arabidopsis thaliana OX=3702 GN=ZAT5 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.7e-10
Identity = 30/49 (61.22%), Postives = 40/49 (81.63%), Query Frame = 0 

Query: 23  SQTSNSKIPGQNAA--VFQCKTCNRLFSSFQALGGHRASHKRPRTAADE 70
           S+  + KI  +N++  V++CKTCNR FSSFQALGGHRASHK+PRT+ +E
Sbjct: 98  SRKIHQKISSENSSFYVYECKTCNRTFSSFQALGGHRASHKKPRTSTEE 146

[Close]
BLAST of Carg24352 vs. Swiss-Prot
Match: sp|Q42410|ZAT12_ARATH (Zinc finger protein ZAT12 OS=Arabidopsis thaliana OX=3702 GN=ZAT12 PE=2 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.2e-07
Identity = 29/53 (54.72%), Postives = 33/53 (62.26%), Query Frame = 0 

Query: 16 AKSLMLLSQTSNSKIP-GQNAAVFQCKTCNRLFSSFQALGGHRASHKRPRTAA 68
          A  LMLLS+     +  G    VF CKTC + F SFQALGGHRASHK+P   A
Sbjct: 16 ANCLMLLSRVGQENVDGGDQKRVFTCKTCLKQFHSFQALGGHRASHKKPNNDA 68

[Close]
BLAST of Carg24352 vs. Swiss-Prot
Match: sp|Q9LX85|ZAT8_ARATH (Zinc finger protein ZAT8 OS=Arabidopsis thaliana OX=3702 GN=ZAT8 PE=2 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.8e-07
Identity = 33/68 (48.53%), Postives = 41/68 (60.29%), Query Frame = 0 

Query: 1  MAAKRIRQEFEASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASH 60
          M A+    E      AK LMLLS+       G+   VF+CKTC + FSSFQALGGHRASH
Sbjct: 1  MVARSEEVEIVEDTAAKCLMLLSRVGECGGGGEK-RVFRCKTCLKEFSSFQALGGHRASH 60

Query: 61 KRPRTAAD 69
          K+   ++D
Sbjct: 61 KKLINSSD 67

[Close]
BLAST of Carg24352 vs. Swiss-Prot
Match: sp|Q42453|ZAT7_ARATH (Zinc finger protein ZAT7 OS=Arabidopsis thaliana OX=3702 GN=ZAT7 PE=2 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 2.5e-06
Identity = 30/53 (56.60%), Postives = 35/53 (66.04%), Query Frame = 0 

Query: 11 EASDIAKSLMLLSQTSN-SKIPGQNAAVFQCKTCNRLFSSFQALGGHRASHKR 63
          E    AK LMLLS+        G +  VF+CKTC + FSSFQALGGHRASHK+
Sbjct: 12 EEDTTAKCLMLLSRVGECGGGCGGDERVFRCKTCLKEFSSFQALGGHRASHKK 64

[Close]
BLAST of Carg24352 vs. TrEMBL
Match: tr|A0A0A0KXE6|A0A0A0KXE6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293330 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 5.1e-33
Identity = 116/167 (69.46%), Postives = 126/167 (75.45%), Query Frame = 0 

Query: 1   MAAKRIRQEFEASDIAKSLMLLS----QTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGH 60
           MAAKRIR++FEASDIAKSL LLS    ++S+ K   QNAAVF+CKTCNR F SFQALGGH
Sbjct: 1   MAAKRIREQFEASDIAKSLTLLSYGIQESSDLKFQPQNAAVFECKTCNRQFPSFQALGGH 60

Query: 61  RASHKRPRTAADEPKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGGFSVVP 120
           RASHKRPRT+ +EPKD           XXXXXXXXXXXXXXXXXXXXXXXX         
Sbjct: 61  RASHKRPRTSVEEPKD-----TADLKQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 AVEKIPVLNRSGSMGVKC--LDLNLTPLENDLKLLFGQMAPRVDLVL 162
             EKIPVL RSGS  V C  LDLNLTPLENDLKLLFG+MAP V+LVL
Sbjct: 121 XXEKIPVLKRSGSTRVMCLDLDLNLTPLENDLKLLFGKMAPAVNLVL 162

[Close]
BLAST of Carg24352 vs. TrEMBL
Match: tr|A0A1S3BH21|A0A1S3BH21_CUCME (zinc finger protein ZAT11 OS=Cucumis melo OX=3656 GN=LOC103489951 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 5.7e-32
Identity = 113/167 (67.66%), Postives = 122/167 (73.05%), Query Frame = 0 

Query: 1   MAAKRIRQEFEASDIAKSLMLLS----QTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGH 60
           MAAKRIR+EF  SDIAKSL LLS    ++S+ K   QN A+F+CKTCNR F SFQALGGH
Sbjct: 1   MAAKRIREEFGTSDIAKSLTLLSYGIQESSDPKFQPQNVALFECKTCNRQFPSFQALGGH 60

Query: 61  RASHKRPRTAADEPKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGGFSVVP 120
           RASHKRPRT+ +EPKD            XXXXXXXXXXXXXXXXXXXXXXX         
Sbjct: 61  RASHKRPRTSVEEPKD-----TADLKQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 AVEKIPVLNRSGSMGVKC--LDLNLTPLENDLKLLFGQMAPRVDLVL 162
             EKIPVL RSGS  V C  LDLNLTPLENDLKLLFG+MAP VDLVL
Sbjct: 121 XXEKIPVLKRSGSTRVMCLDLDLNLTPLENDLKLLFGKMAPTVDLVL 162

[Close]
BLAST of Carg24352 vs. TrEMBL
Match: tr|A0A2P4L178|A0A2P4L178_QUESU (Zinc finger protein zat11 OS=Quercus suber OX=58331 GN=CFP56_40866 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 5.7e-24
Identity = 100/168 (59.52%), Postives = 116/168 (69.05%), Query Frame = 0 

Query: 1   MAAKRIRQE--FEASDIAKSLMLLSQTSNSKI-PGQNAAVFQCKTCNRLFSSFQALGGHR 60
           MA KR+R++   E+ D+A  LMLLS +  +K      A VF+CKTCNR F SFQALGGHR
Sbjct: 1   MAMKRMREDDGIESLDMANCLMLLSHSLETKTRKASRADVFECKTCNRQFPSFQALGGHR 60

Query: 61  ASHKRPRTAADEPKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN----GGGFS 120
           ASHKRP+   +E K+         XXXXXXXXXXXXXXXXXXXXXXXXXX      G FS
Sbjct: 61  ASHKRPKLMGEELKERTKSQNLVNXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMMDGAFS 120

Query: 121 VVPAVEKIPVLNRSGSMGVKCLDLNLTPLENDLKLLFGQMAPRVDLVL 162
                +K+PVL RS S  V CLDLNLTPLENDLKLLFG+ AP++D  L
Sbjct: 121 SAAIEKKVPVLKRSNSTRVMCLDLNLTPLENDLKLLFGKKAPQIDFTL 168

[Close]
BLAST of Carg24352 vs. TrEMBL
Match: tr|A0A2P4L151|A0A2P4L151_QUESU (Zinc finger protein zat11 OS=Quercus suber OX=58331 GN=CFP56_40869 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 2.8e-23
Identity = 97/168 (57.74%), Postives = 116/168 (69.05%), Query Frame = 0 

Query: 1   MAAKRIRQE--FEASDIAKSLMLLSQTSNSKIPGQNAA-VFQCKTCNRLFSSFQALGGHR 60
           MA KR+R++   E+ D+A  LMLLS +  +++   +   VF+CKTCNR F SFQALGGHR
Sbjct: 1   MAMKRMREDGGMESLDMANCLMLLSHSLETQLKKTSRVDVFECKTCNRQFPSFQALGGHR 60

Query: 61  ASHKRPRTAADEPKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXN----GGGFS 120
           ASHKRP+   +E K+          XXXXXXXXXXXXXXXXXXXXXXXXX      G FS
Sbjct: 61  ASHKRPKLMGEELKERAKTQNQGNKXXXXXXXXXXXXXXXXXXXXXXXXXXXAMMDGSFS 120

Query: 121 VVPAVEKIPVLNRSGSMGVKCLDLNLTPLENDLKLLFGQMAPRVDLVL 162
                +K+PVL RS S  V CLDLNLTPLENDLKLLFG+ AP++D  L
Sbjct: 121 SATIEKKVPVLKRSNSTRVMCLDLNLTPLENDLKLLFGKKAPQIDFTL 168

[Close]
BLAST of Carg24352 vs. TrEMBL
Match: tr|A0A151QXH2|A0A151QXH2_CAJCA (Zinc finger protein 1 OS=Cajanus cajan OX=3821 GN=KK1_044046 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 1.1e-22
Identity = 101/163 (61.96%), Postives = 115/163 (70.55%), Query Frame = 0 

Query: 1   MAAKRIRQEFEASDIAKSLMLLSQTSNSKIPGQNAAVFQCKTCNRLFSSFQALGGHRASH 60
           +A  +  +E E+ ++A+SLMLLSQT    +     A F+CKTC R FSSFQALGGHRASH
Sbjct: 3   VATLKRERERESIELAQSLMLLSQTKKPLLDTLAPAEFECKTCKRKFSSFQALGGHRASH 62

Query: 61  KRPRTAADEPKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGGGFSVVPAVEK 120
           K+PR  A+E K     XXXXXXXXXXXXXXXXXXXXXXXXXXXX   +         +EK
Sbjct: 63  KKPRLEAEEEKGPRRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVADNN----EGVIEK 122

Query: 121 IPVLNRSGSMGVKC--LDLNLTPLENDLKLLFGQMAPRVDLVL 162
           +PVL RS S  V C  LDLNLTPLENDLKLLFG  APRVDL L
Sbjct: 123 VPVLKRSNSKRVLCLDLDLNLTPLENDLKLLFGNKAPRVDLSL 161

The following BLAST results are available for this feature:
BLAST of Carg24352 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022962800.11.1e-58100.00zinc finger protein ZAT11-like [Cucurbita moschata][more]
XP_023517898.13.1e-5899.38zinc finger protein ZAT11-like [Cucurbita pepo subsp. pepo][more]
XP_022972734.17.2e-5595.73zinc finger protein ZAT11-like [Cucurbita maxima][more]
XP_023545102.13.7e-3568.90zinc finger protein ZAT11-like [Cucurbita pepo subsp. pepo][more]
XP_022977880.14.9e-3568.90zinc finger protein ZAT11-like [Cucurbita maxima][more]
BLAST of Carg24352 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G37430.15.4e-2051.72C2H2 and C2HC zinc fingers superfamily protein[more]
AT3G53600.11.9e-1757.80C2H2-type zinc finger family protein[more]
AT2G28200.12.1e-1161.22C2H2-type zinc finger family protein[more]
AT2G28710.19.5e-0951.61C2H2-type zinc finger family protein[more]
AT5G59820.11.2e-0854.72C2H2-type zinc finger family protein[more]
BLAST of Carg24352 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SLD4|ZAT11_ARATH9.7e-1951.72Zinc finger protein ZAT11 OS=Arabidopsis thaliana OX=3702 GN=ZAT11 PE=2 SV=1[more]
sp|Q681X4|ZAT5_ARATH3.7e-1061.22Zinc finger protein ZAT5 OS=Arabidopsis thaliana OX=3702 GN=ZAT5 PE=2 SV=1[more]
sp|Q42410|ZAT12_ARATH2.2e-0754.72Zinc finger protein ZAT12 OS=Arabidopsis thaliana OX=3702 GN=ZAT12 PE=2 SV=1[more]
sp|Q9LX85|ZAT8_ARATH3.8e-0748.53Zinc finger protein ZAT8 OS=Arabidopsis thaliana OX=3702 GN=ZAT8 PE=2 SV=1[more]
sp|Q42453|ZAT7_ARATH2.5e-0656.60Zinc finger protein ZAT7 OS=Arabidopsis thaliana OX=3702 GN=ZAT7 PE=2 SV=1[more]
BLAST of Carg24352 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KXE6|A0A0A0KXE6_CUCSA5.1e-3369.46Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293330 PE=4 SV=1[more]
tr|A0A1S3BH21|A0A1S3BH21_CUCME5.7e-3267.66zinc finger protein ZAT11 OS=Cucumis melo OX=3656 GN=LOC103489951 PE=4 SV=1[more]
tr|A0A2P4L178|A0A2P4L178_QUESU5.7e-2459.52Zinc finger protein zat11 OS=Quercus suber OX=58331 GN=CFP56_40866 PE=4 SV=1[more]
tr|A0A2P4L151|A0A2P4L151_QUESU2.8e-2357.74Zinc finger protein zat11 OS=Quercus suber OX=58331 GN=CFP56_40869 PE=4 SV=1[more]
tr|A0A151QXH2|A0A151QXH2_CAJCA1.1e-2261.96Zinc finger protein 1 OS=Cajanus cajan OX=3821 GN=KK1_044046 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036236Znf_C2H2_sf
IPR013087Znf_C2H2_type
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24352-RACarg24352-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 80..102
e-value: 0.034
score: 23.3
coord: 38..60
e-value: 0.38
score: 19.8
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 82..102
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 40..60
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 38..65
score: 10.325
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 80..107
score: 9.91
NoneNo IPR availablePFAMPF13912zf-C2H2_6coord: 37..62
e-value: 1.9E-11
score: 43.5
coord: 80..103
e-value: 1.4E-9
score: 37.5
NoneNo IPR availableGENE3DG3DSA:3.30.160.60coord: 36..102
e-value: 3.1E-10
score: 42.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..73
NoneNo IPR availablePANTHERPTHR26374:SF198ZINC FINGER PROTEIN ZAT11coord: 4..152
NoneNo IPR availablePANTHERPTHR26374FAMILY NOT NAMEDcoord: 4..152
IPR036236Zinc finger C2H2 superfamilySUPERFAMILYSSF57667beta-beta-alpha zinc fingerscoord: 37..102

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg24352Cla018235Watermelon (97103) v1carwmB0468
Carg24352Csa4G293330Cucumber (Chinese Long) v2carcuB0503
Carg24352MELO3C003103Melon (DHL92) v3.5.1carmeB0477
Carg24352ClCG04G008460Watermelon (Charleston Gray)carwcgB0458
Carg24352CSPI04G14350Wild cucumber (PI 183967)carcpiB0511
Carg24352Cucsa.065930Cucumber (Gy14) v1carcgyB0543
Carg24352CmaCh07G009630Cucurbita maxima (Rimu)carcmaB0659
Carg24352CmaCh03G004430Cucurbita maxima (Rimu)carcmaB0657
Carg24352CmoCh07G010150Cucurbita moschata (Rifu)carcmoB0641
Carg24352CmoCh03G004560Cucurbita moschata (Rifu)carcmoB0639
Carg24352Lsi01G014000Bottle gourd (USVL1VR-Ls)carlsiB426
Carg24352Cp4.1LG10g08860Cucurbita pepo (Zucchini)carcpeB0661
Carg24352Cp4.1LG19g04400Cucurbita pepo (Zucchini)carcpeB0662
Carg24352CsGy4G013870Cucumber (Gy14) v2carcgybB0480
Carg24352MELO3C003103.2Melon (DHL92) v3.6.1carmedB0481
Carg24352CsaV3_4G024690Cucumber (Chinese Long) v3carcucB0508
Carg24352Cla97C02G046380Watermelon (97103) v2carwmbB0495
Carg24352Cla97C04G075160Watermelon (97103) v2carwmbB0496
Carg24352Bhi10G000538Wax gourdcarwgoB0574
Carg24352Bhi03G001243Wax gourdcarwgoB0576
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg24352Carg20275Silver-seed gourdcarcarB334
Carg24352Carg03295Silver-seed gourdcarcarB356
Carg24352Carg13793Silver-seed gourdcarcarB465
The following block(s) are covering this gene:
GeneOrganismBlock
Carg24352Silver-seed gourdcarcarB193
Carg24352Silver-seed gourdcarcarB466
Carg24352Cucumber (Gy14) v2carcgybB0479
Carg24352Cucurbita maxima (Rimu)carcmaB0656
Carg24352Cucurbita maxima (Rimu)carcmaB0658
Carg24352Cucurbita moschata (Rifu)carcmoB0638
Carg24352Cucurbita moschata (Rifu)carcmoB0640
Carg24352Cucurbita pepo (Zucchini)carcpeB0663
Carg24352Cucurbita pepo (Zucchini)carcpeB0664
Carg24352Wild cucumber (PI 183967)carcpiB0510
Carg24352Cucumber (Chinese Long) v2carcuB0502
Carg24352Cucumber (Chinese Long) v3carcucB0507
Carg24352Bottle gourd (USVL1VR-Ls)carlsiB427
Carg24352Melon (DHL92) v3.5.1carmeB0476
Carg24352Melon (DHL92) v3.6.1carmedB0480
Carg24352Watermelon (Charleston Gray)carwcgB0457
Carg24352Watermelon (97103) v1carwmB0467
Carg24352Watermelon (97103) v2carwmbB0494
Carg24352Watermelon (97103) v2carwmbB0497
Carg24352Wax gourdcarwgoB0573