Carg24270 (gene) Silver-seed gourd

Overview
NameCarg24270
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionProtoporphyrinogen oxidase
LocationCucurbita_argyrosperma_scaffold_352 : 97102 .. 101149 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCACAAATAGAATATTTATTATATATATGGAATGCCTTCTTTATTCGACTTGTCCTAAATTTCAAGGTTGTTGACTATCTAATTGATCCTATTGTTGCTGGTACAAGTGCTGGAGATCCCGACTCTCTTTCTGTGAGTACTAACATTTCGGTTTTCTGTTTCTTGTATTAGTTATAAGGCAAACATGCCTTTTAAATCATGCAAGCCAATAAACTCAAGTACAGGTTTCTACGTTATTTGCATGTTTGACAATAGTCATGCTTAGGGTTGAGTTGAGCTTCCAATTTTGTGTGTGAAAAGCTGTACGTTGGTCATCAATCAACTAATAAGCAGGGGCATATTTGTTATTATCCTATTGCAGCTTAACTAATTCTGCTTCTTTTTTTTACTTCCGTTCAACAGATGAGTCATTCATTTCCGGAGCTGTGGAATATAGAGAAAAGGTAATTTTGATACATACTTCACGTTAAATTACTTTACTACTGTTCCGATTTTAGAAACCTTAGAATAAGTTTCTAAATAACCCATTAAGTTACTGCTCTAATCGAGCTTCAATCAAGTCATTTTGGTTGAAGTTTTATTGCACTGCACCAAGCAGTTTCATTATTTATAAACTCACTGTAAACGTAAAAAGAACTGAAACTGCTTTAGCCCAATGTCTATCCTTGGTCGGAATACTGTACAATTTTTCTAGACTTGGGTGTTTTGCTTTATGGCATTGTAATGCCTGTTATACAAAATGTATTGATTTGTTAGTGGTGAGCTTTCTTTTTTCCTCAGGTTTGGTTCTATTTTATCTGGATTAGTGCAGTCGAAATTGTCTACCAAAAAGGAGAATAGTGGAGTGAGAAATGGTACTACAGGAAAAAGGAAACCTACTCGTGGTTCATTTTCCTTTCAGAATGGAATGCAGGTATCTTCTGTGCCATTTTCTTTAAGTCCCCTCTTTTGTAGGATTTGGTTCATTTAGTTTCACTATTGTTGAGTTCATTTTCTACTAGTATTTTGACAGTTGTCCAATAAGCCTCGTTTTACATGGATTATTGTTGTCTCCTCCTCGGCTGAAACTAAATGTTTAGATTGATCCATCTTGTGACAGACGCTCACTGATACACTAAGCAAAGAGCTCGGTGAAGATGTGCTTAAGTTAAGATCAGAAGTTTTGTCATTATCTTACAATGCTGGGAAGTCCGCCTCACAAAATTGGTCACTCACTTATTCTAGTGACCGGAATTCTAAGAATTTAATTGCTGACGCTGATGCTGTAATCATGACGGTTAGGCCCATTGGAGATTTTTGTTTGCTTTTATGTGTTTCTGAACTTTCTAATTTGTTTGCTTTGCACAATCCTTCATACTTTAGACGACCTTACTAAATGTACAGCGGTAAGCTTCCCTTAATTGAAGAGAAATGAGCTAAAAGAATGTTAAAACTCATACTGTATGACTACATAAGGGCATTTCAAGTTTAGAACTGGATACCACTGCTAGAAAAAAAAATTAATATTTTGATTGGCCCGACAGGGACCATCTCTGGGAACAACTTTAATTATTTTTTATTATTATCGTTTAATTTCTAATTCAATTATACCTGCCTTGTCTCGAGTAGAGGCAAATATTTAAATACTATTATCAATTGATTATTATTTTCAGAAATGTCTTATTTTTAAGTTTGTATTTGTTCTGCTGATTAATAACATGTTGAGGCATTTAATGACACGCTTGTCTTATCCCAGGCTCCTGTTTGCAATGTCAGAGAAATGAAGTTTATGAAAGGAGGAATTCCATTTCCGCTAAATTTTCTTCCTGAGGTAATATGAGCAGATTTATGAAAGGAAAAGCAATAATGATATTGTTATATGGCATGCATGTTTGCAATGTTCATACAAATAGAAATTATGACGAGAAAGAGATTAATAGTTGAATTTTTCTTTTATTTTCTTTTCTTTTCAATTCTTTTCGTTTGAAGTGGTGAAGCTCGACCCTGAATAGGAAAGAAAGAAAGAGGCTTTCCCCATATTTTATTATCTTCTGAAAATGTAAAGAACTCTTCAACCACAGAAGATATATCTTCAGAAAACCTAAAGAACTTTTCAACCACTTCTCTGCTTCTGTATCTACTCTGATGCAATAGTTTGGATGGATGCATGTAACATCTAAACCGACCAACGCTTAAATTCTTGCCCTAATTCTATTCTGAATGTTCAGATCAGGGAACAGTTGGATGGCGTGTTGTGACATCATCCTTACGTACTTCCTACCTGAACTCCCCCACACTTGCATCACACTCCCATCCCCCAGAGTCTAAACACCTGAGCCCCCTTCACGACTTTTCCCTTTCTTCCTTTGGTACATAAAGTACTGGATCTTCTTAAACCTCAAAGCAACTTCGTAAGAGTAGCTGAAGACTTCACTATTTTTATTACAGGTGGCTTACTTGCCTTTGTCAGTCATGATAACTACCTTCAGAAAGGAAAGTGTTAAGCGACCACTGGAGGGATTTGGAGTTCTTGTACCTTCCTTAGAGCAACAAAATGGTCTAACTACCCTTGGTATTTTTATTTGTTCTTTTGGATTCCTGAAAACTTACATTGTTCCTCCAAACAGACGAGTAATTCTTCTCTACAGGTACACTCTTTTCCTCCATGATGTTTCCAAATCGTGCATCAAATGATGAGTATCTGTATACTACTTTTATTGGAGGGAGTCGAAACAGGGAGCTTGCAAAGTCATCAACGTTAGTAGCGCTACTTGGTTTTCGTTATTATGCAAACAAACAAAAAATATATTGCTGCCATTATCTAGTTCAACAAATTGTTTTTGTTTTATTTTTACTTCTGTTTTATTCTTGCATGTTGCAACTAAACTTTCCTTCTCTTGCTTTCCAGGGATGAGCTGAAGCAAATTGTTACATCGGATCTCAGACAGCTGTTGGGAGTTGAAGGGGAGCCCACTTTTGTCAAGTACACAAACTTCCATTTACATCGTATCACTCCTGATAGTTTTGATTAGAAATAAATGTCAAGAACTTTCACGTGTGTTCACACTTTCTTCTGGCACGTTATACGTACAATGACAGCCATTTCTACTGGAGCAAAGCATTTCCCTTATATGGGCGTAACTATGATTCAGTTGTGAAGGCAATTGAAACAATGGAAAAAAGTCTTCCTGGCTTCTTTTATGCAGGTAACTACAAGGCATCCAGAATTTGCAGAAATTATTCTTGTGTTCGAGTGTTCTGAATTAGAATGAGAACTAGAATTTGAGGTTGTTAAATAACTGTTATTCTTGAAAATTAAATTTAAGAGTGATTTGTTTTTAAAATTTATTTTCAGCGCATCCTCTATTATGTGGATTTGATTATTAGTTTGATTAGCAATGTCTAACACAAGGCATGGTACTGTTGATATGAGGTGGAATAATACTAATATGAAGTTTTTATTATTATCTTTTCTAGCAGAGAAGCAAAGGATGACTCAAATTTTAGAATATCCTTTTTCATATTATTTTAAATAATTACTAGTTAAAAAAATTTAGCTAGGTTTCCTCGTAAGTTAAGGTTAATATAATCATCAAACTTTCTTTCTTAAATCATATTATACCTTTAACTTTTTGTCATCCTCATATCCGTTTTTCGTTTTTTGGTTCACATTACTTACATCTAGCTTCGTACATATTTGTTCAAATCCTATGACGTGATGTGATGGGCATATTCTTACTGTTTTGTTACATTCAATTTTCCTATCCCCGAGTAATATGAACTATTTCATTTCTGAATCTTGCATACTTTTAGTTTCTTGTGAGTTGTGGATTTTCAACCTTATGAATTACGCACCTTGTAGGTAACCACAGGGATGGTTTGTCTGTTGGAAAATCTATAGCCTCCGGATGCAAAGCTGCTGATCTTGTTATTTCTTATCTGGAGTCTTCTACTCATCAGCCGTGTGCTGAACAACAAGAGTTGAAAAAATGAAAGTGCATCCTTGTTACATAGTGAGTGATTTTACCCTTTTCTTAGATCTTTAAATTTTAAATGATTTGAAAGT

mRNA sequence

ATGGCACAAATAGAATATTTATTATATATATGGAATGCCTTCTTTATTCGACTTGTCCTAAATTTCAAGGTTGTTGACTATCTAATTGATCCTATTGTTGCTGGTACAAGTGCTGGAGATCCCGACTCTCTTTCTATGAGTCATTCATTTCCGGAGCTGTGGAATATAGAGAAAAGGTTTGGTTCTATTTTATCTGGATTAGTGCAGTCGAAATTGTCTACCAAAAAGGAGAATAGTGGAGTGAGAAATGGTACTACAGGAAAAAGGAAACCTACTCGTGGTTCATTTTCCTTTCAGAATGGAATGCAGACGCTCACTGATACACTAAGCAAAGAGCTCGGTGAAGATGTGCTTAAGTTAAGATCAGAAGTTTTGTCATTATCTTACAATGCTGGGAAGTCCGCCTCACAAAATTGGTCACTCACTTATTCTAGTGACCGGAATTCTAAGAATTTAATTGCTGACGCTGATGCTGTAATCATGACGGCTCCTGTTTGCAATGTCAGAGAAATGAAGTTTATGAAAGGAGGAATTCCATTTCCGCTAAATTTTCTTCCTGAGGTGGCTTACTTGCCTTTGTCAGTCATGATAACTACCTTCAGAAAGGAAAGTGTTAAGCGACCACTGGAGGGATTTGGAGTTCTTGTACCTTCCTTAGAGCAACAAAATGGTCTAACTACCCTTGGTACACTCTTTTCCTCCATGATGTTTCCAAATCGTGCATCAAATGATGAGTATCTGTATACTACTTTTATTGGAGGGAGTCGAAACAGGGAGCTTGCAAAGTCATCAACGGATGAGCTGAAGCAAATTGTTACATCGGATCTCAGACAGCTGTTGGGAGTTGAAGGGGAGCCCACTTTTGTCAACCATTTCTACTGGAGCAAAGCATTTCCCTTATATGGGCGTAACTATGATTCAGTTGTGAAGGCAATTGAAACAATGGAAAAAAGTCTTCCTGGCTTCTTTTATGCAGGTAACCACAGGGATGGTTTGTCTGTTGGAAAATCTATAGCCTCCGGATGCAAAGCTGCTGATCTTGTTATTTCTTATCTGGAGTCTTCTACTCATCAGCCGTGTGCTGAACAACAAGAGTTGAAAAAATGAAAGTGCATCCTTGTTACATAGTGAGTGATTTTACCCTTTTCTTAGATCTTTAAATTTTAAATGATTTGAAAGT

Coding sequence (CDS)

ATGGCACAAATAGAATATTTATTATATATATGGAATGCCTTCTTTATTCGACTTGTCCTAAATTTCAAGGTTGTTGACTATCTAATTGATCCTATTGTTGCTGGTACAAGTGCTGGAGATCCCGACTCTCTTTCTATGAGTCATTCATTTCCGGAGCTGTGGAATATAGAGAAAAGGTTTGGTTCTATTTTATCTGGATTAGTGCAGTCGAAATTGTCTACCAAAAAGGAGAATAGTGGAGTGAGAAATGGTACTACAGGAAAAAGGAAACCTACTCGTGGTTCATTTTCCTTTCAGAATGGAATGCAGACGCTCACTGATACACTAAGCAAAGAGCTCGGTGAAGATGTGCTTAAGTTAAGATCAGAAGTTTTGTCATTATCTTACAATGCTGGGAAGTCCGCCTCACAAAATTGGTCACTCACTTATTCTAGTGACCGGAATTCTAAGAATTTAATTGCTGACGCTGATGCTGTAATCATGACGGCTCCTGTTTGCAATGTCAGAGAAATGAAGTTTATGAAAGGAGGAATTCCATTTCCGCTAAATTTTCTTCCTGAGGTGGCTTACTTGCCTTTGTCAGTCATGATAACTACCTTCAGAAAGGAAAGTGTTAAGCGACCACTGGAGGGATTTGGAGTTCTTGTACCTTCCTTAGAGCAACAAAATGGTCTAACTACCCTTGGTACACTCTTTTCCTCCATGATGTTTCCAAATCGTGCATCAAATGATGAGTATCTGTATACTACTTTTATTGGAGGGAGTCGAAACAGGGAGCTTGCAAAGTCATCAACGGATGAGCTGAAGCAAATTGTTACATCGGATCTCAGACAGCTGTTGGGAGTTGAAGGGGAGCCCACTTTTGTCAACCATTTCTACTGGAGCAAAGCATTTCCCTTATATGGGCGTAACTATGATTCAGTTGTGAAGGCAATTGAAACAATGGAAAAAAGTCTTCCTGGCTTCTTTTATGCAGGTAACCACAGGGATGGTTTGTCTGTTGGAAAATCTATAGCCTCCGGATGCAAAGCTGCTGATCTTGTTATTTCTTATCTGGAGTCTTCTACTCATCAGCCGTGTGCTGAACAACAAGAGTTGAAAAAATGA

Protein sequence

MAQIEYLLYIWNAFFIRLVLNFKVVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILSGLVQSKLSTKKENSGVRNGTTGKRKPTRGSFSFQNGMQTLTDTLSKELGEDVLKLRSEVLSLSYNAGKSASQNWSLTYSSDRNSKNLIADADAVIMTAPVCNVREMKFMKGGIPFPLNFLPEVAYLPLSVMITTFRKESVKRPLEGFGVLVPSLEQQNGLTTLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAKSSTDELKQIVTSDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKSLPGFFYAGNHRDGLSVGKSIASGCKAADLVISYLESSTHQPCAEQQELKK
Homology
[Close]
BLAST of Carg24270 vs. NCBI nr
Match: XP_022938648.1 (protoporphyrinogen oxidase 2, chloroplastic/mitochondrial isoform X4 [Cucurbita moschata])

HSP 1 Score: 681.0 bits (1756), Expect = 2.2e-192
Identity = 344/346 (99.42%), Postives = 345/346 (99.71%), Query Frame = 0 

Query: 23  KVVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILSGLVQSKLSTKKENSGVR 82
           +VVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILSGLVQSKLSTKKENSGVR
Sbjct: 173 EVVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILSGLVQSKLSTKKENSGVR 232

Query: 83  NGTTGKRKPTRGSFSFQNGMQTLTDTLSKELGEDVLKLRSEVLSLSYNAGKSASQNWSLT 142
           NGTTGKRKPTRGSFSFQNGMQTLTDTLSKELGEDVLKLRSEVLSLSYNAGKSASQNWSLT
Sbjct: 233 NGTTGKRKPTRGSFSFQNGMQTLTDTLSKELGEDVLKLRSEVLSLSYNAGKSASQNWSLT 292

Query: 143 YSSDRNSKNLIADADAVIMTAPVCNVREMKFMKGGIPFPLNFLPEVAYLPLSVMITTFRK 202
           YSSDRNSKNLIADADAVIMTAPVCNVREMKFMKGGIPFPLNFLPEVAYLPLSVMITTFRK
Sbjct: 293 YSSDRNSKNLIADADAVIMTAPVCNVREMKFMKGGIPFPLNFLPEVAYLPLSVMITTFRK 352

Query: 203 ESVKRPLEGFGVLVPSLEQQNGLTTLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK 262
           ESVKRPLEGFGVLVPSLEQQNGL TLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK
Sbjct: 353 ESVKRPLEGFGVLVPSLEQQNGLRTLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK 412

Query: 263 SSTDELKQIVTSDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKSLPGF 322
           SSTDELKQIVTSDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKSLPGF
Sbjct: 413 SSTDELKQIVTSDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKSLPGF 472

Query: 323 FYAGNHRDGLSVGKSIASGCKAADLVISYLESSTHQPCAEQQELKK 369
           FYAGNHRDGLSVGKSIASGCKAADLVISYLESSTHQPCAEQQELKK
Sbjct: 473 FYAGNHRDGLSVGKSIASGCKAADLVISYLESSTHQPCAEQQELKK 518

[Close]
BLAST of Carg24270 vs. NCBI nr
Match: XP_022938645.1 (protoporphyrinogen oxidase 2, chloroplastic/mitochondrial isoform X2 [Cucurbita moschata])

HSP 1 Score: 681.0 bits (1756), Expect = 2.2e-192
Identity = 344/346 (99.42%), Postives = 345/346 (99.71%), Query Frame = 0 

Query: 23  KVVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILSGLVQSKLSTKKENSGVR 82
           +VVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILSGLVQSKLSTKKENSGVR
Sbjct: 173 EVVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILSGLVQSKLSTKKENSGVR 232

Query: 83  NGTTGKRKPTRGSFSFQNGMQTLTDTLSKELGEDVLKLRSEVLSLSYNAGKSASQNWSLT 142
           NGTTGKRKPTRGSFSFQNGMQTLTDTLSKELGEDVLKLRSEVLSLSYNAGKSASQNWSLT
Sbjct: 233 NGTTGKRKPTRGSFSFQNGMQTLTDTLSKELGEDVLKLRSEVLSLSYNAGKSASQNWSLT 292

Query: 143 YSSDRNSKNLIADADAVIMTAPVCNVREMKFMKGGIPFPLNFLPEVAYLPLSVMITTFRK 202
           YSSDRNSKNLIADADAVIMTAPVCNVREMKFMKGGIPFPLNFLPEVAYLPLSVMITTFRK
Sbjct: 293 YSSDRNSKNLIADADAVIMTAPVCNVREMKFMKGGIPFPLNFLPEVAYLPLSVMITTFRK 352

Query: 203 ESVKRPLEGFGVLVPSLEQQNGLTTLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK 262
           ESVKRPLEGFGVLVPSLEQQNGL TLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK
Sbjct: 353 ESVKRPLEGFGVLVPSLEQQNGLRTLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK 412

Query: 263 SSTDELKQIVTSDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKSLPGF 322
           SSTDELKQIVTSDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKSLPGF
Sbjct: 413 SSTDELKQIVTSDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKSLPGF 472

Query: 323 FYAGNHRDGLSVGKSIASGCKAADLVISYLESSTHQPCAEQQELKK 369
           FYAGNHRDGLSVGKSIASGCKAADLVISYLESSTHQPCAEQQELKK
Sbjct: 473 FYAGNHRDGLSVGKSIASGCKAADLVISYLESSTHQPCAEQQELKK 518

[Close]
BLAST of Carg24270 vs. NCBI nr
Match: XP_022938650.1 (protoporphyrinogen oxidase 2, chloroplastic/mitochondrial isoform X6 [Cucurbita moschata])

HSP 1 Score: 681.0 bits (1756), Expect = 2.2e-192
Identity = 344/346 (99.42%), Postives = 345/346 (99.71%), Query Frame = 0 

Query: 23  KVVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILSGLVQSKLSTKKENSGVR 82
           +VVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILSGLVQSKLSTKKENSGVR
Sbjct: 168 EVVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILSGLVQSKLSTKKENSGVR 227

Query: 83  NGTTGKRKPTRGSFSFQNGMQTLTDTLSKELGEDVLKLRSEVLSLSYNAGKSASQNWSLT 142
           NGTTGKRKPTRGSFSFQNGMQTLTDTLSKELGEDVLKLRSEVLSLSYNAGKSASQNWSLT
Sbjct: 228 NGTTGKRKPTRGSFSFQNGMQTLTDTLSKELGEDVLKLRSEVLSLSYNAGKSASQNWSLT 287

Query: 143 YSSDRNSKNLIADADAVIMTAPVCNVREMKFMKGGIPFPLNFLPEVAYLPLSVMITTFRK 202
           YSSDRNSKNLIADADAVIMTAPVCNVREMKFMKGGIPFPLNFLPEVAYLPLSVMITTFRK
Sbjct: 288 YSSDRNSKNLIADADAVIMTAPVCNVREMKFMKGGIPFPLNFLPEVAYLPLSVMITTFRK 347

Query: 203 ESVKRPLEGFGVLVPSLEQQNGLTTLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK 262
           ESVKRPLEGFGVLVPSLEQQNGL TLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK
Sbjct: 348 ESVKRPLEGFGVLVPSLEQQNGLRTLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK 407

Query: 263 SSTDELKQIVTSDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKSLPGF 322
           SSTDELKQIVTSDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKSLPGF
Sbjct: 408 SSTDELKQIVTSDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKSLPGF 467

Query: 323 FYAGNHRDGLSVGKSIASGCKAADLVISYLESSTHQPCAEQQELKK 369
           FYAGNHRDGLSVGKSIASGCKAADLVISYLESSTHQPCAEQQELKK
Sbjct: 468 FYAGNHRDGLSVGKSIASGCKAADLVISYLESSTHQPCAEQQELKK 513

[Close]
BLAST of Carg24270 vs. NCBI nr
Match: XP_022938647.1 (protoporphyrinogen oxidase 2, chloroplastic/mitochondrial isoform X3 [Cucurbita moschata])

HSP 1 Score: 681.0 bits (1756), Expect = 2.2e-192
Identity = 344/346 (99.42%), Postives = 345/346 (99.71%), Query Frame = 0 

Query: 23  KVVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILSGLVQSKLSTKKENSGVR 82
           +VVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILSGLVQSKLSTKKENSGVR
Sbjct: 173 EVVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILSGLVQSKLSTKKENSGVR 232

Query: 83  NGTTGKRKPTRGSFSFQNGMQTLTDTLSKELGEDVLKLRSEVLSLSYNAGKSASQNWSLT 142
           NGTTGKRKPTRGSFSFQNGMQTLTDTLSKELGEDVLKLRSEVLSLSYNAGKSASQNWSLT
Sbjct: 233 NGTTGKRKPTRGSFSFQNGMQTLTDTLSKELGEDVLKLRSEVLSLSYNAGKSASQNWSLT 292

Query: 143 YSSDRNSKNLIADADAVIMTAPVCNVREMKFMKGGIPFPLNFLPEVAYLPLSVMITTFRK 202
           YSSDRNSKNLIADADAVIMTAPVCNVREMKFMKGGIPFPLNFLPEVAYLPLSVMITTFRK
Sbjct: 293 YSSDRNSKNLIADADAVIMTAPVCNVREMKFMKGGIPFPLNFLPEVAYLPLSVMITTFRK 352

Query: 203 ESVKRPLEGFGVLVPSLEQQNGLTTLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK 262
           ESVKRPLEGFGVLVPSLEQQNGL TLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK
Sbjct: 353 ESVKRPLEGFGVLVPSLEQQNGLRTLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK 412

Query: 263 SSTDELKQIVTSDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKSLPGF 322
           SSTDELKQIVTSDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKSLPGF
Sbjct: 413 SSTDELKQIVTSDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKSLPGF 472

Query: 323 FYAGNHRDGLSVGKSIASGCKAADLVISYLESSTHQPCAEQQELKK 369
           FYAGNHRDGLSVGKSIASGCKAADLVISYLESSTHQPCAEQQELKK
Sbjct: 473 FYAGNHRDGLSVGKSIASGCKAADLVISYLESSTHQPCAEQQELKK 518

[Close]
BLAST of Carg24270 vs. NCBI nr
Match: XP_022938652.1 (protoporphyrinogen oxidase, chloroplastic/mitochondrial isoform X8 [Cucurbita moschata])

HSP 1 Score: 681.0 bits (1756), Expect = 2.2e-192
Identity = 344/346 (99.42%), Postives = 345/346 (99.71%), Query Frame = 0 

Query: 23  KVVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILSGLVQSKLSTKKENSGVR 82
           +VVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILSGLVQSKLSTKKENSGVR
Sbjct: 165 EVVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILSGLVQSKLSTKKENSGVR 224

Query: 83  NGTTGKRKPTRGSFSFQNGMQTLTDTLSKELGEDVLKLRSEVLSLSYNAGKSASQNWSLT 142
           NGTTGKRKPTRGSFSFQNGMQTLTDTLSKELGEDVLKLRSEVLSLSYNAGKSASQNWSLT
Sbjct: 225 NGTTGKRKPTRGSFSFQNGMQTLTDTLSKELGEDVLKLRSEVLSLSYNAGKSASQNWSLT 284

Query: 143 YSSDRNSKNLIADADAVIMTAPVCNVREMKFMKGGIPFPLNFLPEVAYLPLSVMITTFRK 202
           YSSDRNSKNLIADADAVIMTAPVCNVREMKFMKGGIPFPLNFLPEVAYLPLSVMITTFRK
Sbjct: 285 YSSDRNSKNLIADADAVIMTAPVCNVREMKFMKGGIPFPLNFLPEVAYLPLSVMITTFRK 344

Query: 203 ESVKRPLEGFGVLVPSLEQQNGLTTLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK 262
           ESVKRPLEGFGVLVPSLEQQNGL TLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK
Sbjct: 345 ESVKRPLEGFGVLVPSLEQQNGLRTLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK 404

Query: 263 SSTDELKQIVTSDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKSLPGF 322
           SSTDELKQIVTSDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKSLPGF
Sbjct: 405 SSTDELKQIVTSDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKSLPGF 464

Query: 323 FYAGNHRDGLSVGKSIASGCKAADLVISYLESSTHQPCAEQQELKK 369
           FYAGNHRDGLSVGKSIASGCKAADLVISYLESSTHQPCAEQQELKK
Sbjct: 465 FYAGNHRDGLSVGKSIASGCKAADLVISYLESSTHQPCAEQQELKK 510

[Close]
BLAST of Carg24270 vs. TAIR10
Match: AT5G14220.1 (Flavin containing amine oxidoreductase family)

HSP 1 Score: 455.7 bits (1171), Expect = 2.7e-128
Identity = 227/335 (67.76%), Postives = 270/335 (80.60%), Query Frame = 0 

Query: 23  KVVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILSGLVQSKLSTKKENSGVR 82
           +VVDYLIDP V GTSA DPDSLSM HSFP+LWN+EK FGSI+ G +++K + K   S   
Sbjct: 167 EVVDYLIDPFVGGTSAADPDSLSMKHSFPDLWNVEKSFGSIIVGAIRTKFAAKGGKSRDT 226

Query: 83  NGTTGKRKPTRGSFSFQNGMQTLTDTLSKELGEDVLKLRSEVLSLSYNAGKSASQNWSLT 142
             + G +K +RGSFSF+ GMQ L DTL K L  D + L S+VLSLSYN+G S  +NWSL+
Sbjct: 227 KSSPGTKKGSRGSFSFKGGMQILPDTLCKSLSHDEINLDSKVLSLSYNSG-SRQENWSLS 286

Query: 143 YSSDRNSKNLIADADAVIMTAPVCNVREMKFMKGGIPFPLNFLPEVAYLPLSVMITTFRK 202
             S   ++      DAVIMTAP+CNV+EMK MKGG PF LNFLPE+ Y+PLSV+ITTF K
Sbjct: 287 CVSHNETQRQNPHYDAVIMTAPLCNVKEMKVMKGGQPFQLNFLPEINYMPLSVLITTFTK 346

Query: 203 ESVKRPLEGFGVLVPSLEQQNGLTTLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK 262
           E VKRPLEGFGVL+PS EQ++G  TLGTLFSSMMFP+R+ +D +LYTTFIGGSRN+ELAK
Sbjct: 347 EKVKRPLEGFGVLIPSKEQKHGFKTLGTLFSSMMFPDRSPSDVHLYTTFIGGSRNQELAK 406

Query: 263 SSTDELKQIVTSDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKSLPGF 322
           +STDELKQ+VTSDL++LLGVEGEP  VNH+YW KAFPLY  +YDSV++AI+ ME  LPGF
Sbjct: 407 ASTDELKQVVTSDLQRLLGVEGEPVSVNHYYWRKAFPLYDSSYDSVMEAIDKMENDLPGF 466

Query: 323 FYAGNHRDGLSVGKSIASGCKAADLVISYLESSTH 358
           FYAGNHR GLSVGKSIASGCKAADLVISYLES ++
Sbjct: 467 FYAGNHRGGLSVGKSIASGCKAADLVISYLESCSN 500

[Close]
BLAST of Carg24270 vs. TAIR10
Match: AT4G01690.1 (Flavin containing amine oxidoreductase family)

HSP 1 Score: 120.9 bits (302), Expect = 1.6e-27
Identity = 102/354 (28.81%), Postives = 176/354 (49.72%), Query Frame = 0 

Query: 15  FIRLVLNFKVVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILSGLVQSKLST 74
           F+R  L  +V + LI+P  +G  AGDP  LSM  +F ++W +E+  GSI+ G  ++    
Sbjct: 197 FVRRNLGDEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWKLEQNGGSIIGGTFKAIQER 256

Query: 75  KKENSGVRNGTTGK-RKPTRGSFSFQNGMQTLTDTLSKELGEDVLKLRSEVLSLSYNAGK 134
           K      R+    K +  T G  SF+ G++ L + +S  LG  V KL  ++  ++    K
Sbjct: 257 KNAPKAERDPRLPKPQGQTVG--SFRKGLRMLPEAISARLGSKV-KLSWKLSGIT----K 316

Query: 135 SASQNWSLTYSSDRNSKNLIADADAVIMTAPVCNVREMKFMKGGIPFPL-----NFLPEV 194
             S  ++LTY +     ++   + +V+MT P         +  G+  PL     N L ++
Sbjct: 317 LESGGYNLTYETPDGLVSV--QSKSVVMTVP-------SHVASGLLRPLSESAANALSKL 376

Query: 195 AYLPLSVMITTFRKESVKR------PLEGFGVLVPSLEQQNGLTTLGTLFSSMMFPNRAS 254
            Y P++ +  ++ KE+++        L+GFG L P   +  G+ TLGT++SS +FPNRA 
Sbjct: 377 YYPPVAAVSISYPKEAIRTECLIDGELKGFGQLHP---RTQGVETLGTIYSSSLFPNRAP 436

Query: 255 NDEYLYTTFIGGSRNRELAKSSTDELKQIVTSDLRQLL--GVEGEPTFVNHFYWSKAFPL 314
               L   +IGGS N  +   S  EL + V  DLR++L      +P  +    W +A P 
Sbjct: 437 PGRILLLNYIGGSTNTGILSKSEGELVEAVDRDLRKMLIKPNSTDPLKLGVRVWPQAIPQ 496

Query: 315 Y-GRNYDSVVKAIETMEKS-LPGFFYAGNHRDGLSVGKSIASGCKAADLVISYL 353
           +   ++D +  A  ++  S   G F  GN+  G+++G+ +    + A  V +++
Sbjct: 497 FLVGHFDILDTAKSSLTSSGYEGLFLGGNYVAGVALGRCVEGAYETAIEVNNFM 531

[Close]
BLAST of Carg24270 vs. Swiss-Prot
Match: sp|Q94IG7|PPOCM_SPIOL (Protoporphyrinogen oxidase 2 OS=Spinacia oleracea OX=3562 GN=POX2 PE=1 SV=1)

HSP 1 Score: 465.7 bits (1197), Expect = 4.8e-130
Identity = 239/332 (71.99%), Postives = 276/332 (83.13%), Query Frame = 0 

Query: 25  VDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILSGLVQSKLSTKKENSGVRNG 84
           VDYLIDP VAGTS GDP SLSM H+FPELWNIE RFGS++SG +QSKLS+KKE  G +  
Sbjct: 196 VDYLIDPFVAGTSGGDPQSLSMRHAFPELWNIENRFGSVISGFIQSKLSSKKEKGGEKQ- 255

Query: 85  TTGKRKPTRGSFSFQNGMQTLTDTLSKELGEDVLKLRSEVLSLSY-NAGKSASQNWSLTY 144
           ++ K+   RGSFSFQ GMQTL DT+ KE GED LKL+SEVLSLSY + G   S+NWS+  
Sbjct: 256 SSNKKPRVRGSFSFQGGMQTLVDTICKEFGEDELKLQSEVLSLSYSHNGSLTSENWSV-- 315

Query: 145 SSDRNSKNLIADADAVIMTAPVCNVREMKFMKGGIPFPLNFLPEVAYLPLSVMITTFRKE 204
           SS  NS       DAV++TAP+ NV+E+K MK   PF L+F+PEV+ LPLSV+ITTF+K 
Sbjct: 316 SSMSNSTIQDQPYDAVVVTAPINNVKELKIMKVENPFSLDFIPEVSCLPLSVIITTFKKT 375

Query: 205 SVKRPLEGFGVLVPSLEQQNGLTTLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAKS 264
           +VKRPLEGFGVLVPS EQ NGL TLGTLFSSMMFP+RA +D YLYTTF+GGSRNRELAK+
Sbjct: 376 NVKRPLEGFGVLVPSNEQHNGLKTLGTLFSSMMFPDRAPSDVYLYTTFVGGSRNRELAKA 435

Query: 265 STDELKQIVTSDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKSLPGFF 324
           STDELKQIV+SDL+QLLG EGEPTFVNHFYWSKAFPLYGRNYDSV++AIE ME+ LPG F
Sbjct: 436 STDELKQIVSSDLQQLLGTEGEPTFVNHFYWSKAFPLYGRNYDSVLRAIEKMERDLPGLF 495

Query: 325 YAGNHRDGLSVGKSIASGCKAADLVISYLESS 356
           YAGNH+ GLSVGKSIASG KAA+L ISYLES+
Sbjct: 496 YAGNHKGGLSVGKSIASGYKAAELAISYLESN 524

[Close]
BLAST of Carg24270 vs. Swiss-Prot
Match: sp|Q8S9J1|PPOCM_ARATH (Protoporphyrinogen oxidase 2, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PPOX2 PE=1 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 5.0e-127
Identity = 227/335 (67.76%), Postives = 270/335 (80.60%), Query Frame = 0 

Query: 23  KVVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILSGLVQSKLSTKKENSGVR 82
           +VVDYLIDP V GTSA DPDSLSM HSFP+LWN+EK FGSI+ G +++K + K   S   
Sbjct: 167 EVVDYLIDPFVGGTSAADPDSLSMKHSFPDLWNVEKSFGSIIVGAIRTKFAAKGGKSRDT 226

Query: 83  NGTTGKRKPTRGSFSFQNGMQTLTDTLSKELGEDVLKLRSEVLSLSYNAGKSASQNWSLT 142
             + G +K +RGSFSF+ GMQ L DTL K L  D + L S+VLSLSYN+G S  +NWSL+
Sbjct: 227 KSSPGTKKGSRGSFSFKGGMQILPDTLCKSLSHDEINLDSKVLSLSYNSG-SRQENWSLS 286

Query: 143 YSSDRNSKNLIADADAVIMTAPVCNVREMKFMKGGIPFPLNFLPEVAYLPLSVMITTFRK 202
             S   ++      DAVIMTAP+CNV+EMK MKGG PF LNFLPE+ Y+PLSV+ITTF K
Sbjct: 287 CVSHNETQRQNPHYDAVIMTAPLCNVKEMKVMKGGQPFQLNFLPEINYMPLSVLITTFTK 346

Query: 203 ESVKRPLEGFGVLVPSLEQQNGLTTLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK 262
           E VKRPLEGFGVL+PS EQ++G  TLGTLFSSMMFP+R+ +D +LYTTFIGGSRN+ELAK
Sbjct: 347 EKVKRPLEGFGVLIPSKEQKHGFKTLGTLFSSMMFPDRSPSDVHLYTTFIGGSRNQELAK 406

Query: 263 SSTDELKQIVTSDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKSLPGF 322
           +STDELKQ+VTSDL++LLGVEGEP  VNH+YW KAFPLY  +YDSV++AI+ ME  LPGF
Sbjct: 407 ASTDELKQVVTSDLQRLLGVEGEPVSVNHYYWRKAFPLYDSSYDSVMEAIDKMENDLPGF 466

Query: 323 FYAGNHRDGLSVGKSIASGCKAADLVISYLESSTH 358
           FYAGNHR GLSVGKSIASGCKAADLVISYLES ++
Sbjct: 467 FYAGNHRGGLSVGKSIASGCKAADLVISYLESCSN 500

[Close]
BLAST of Carg24270 vs. Swiss-Prot
Match: sp|O24164|PPOM_TOBAC (Protoporphyrinogen oxidase, mitochondrial OS=Nicotiana tabacum OX=4097 GN=PPXII PE=1 SV=1)

HSP 1 Score: 446.4 bits (1147), Expect = 3.0e-124
Identity = 225/333 (67.57%), Postives = 266/333 (79.88%), Query Frame = 0 

Query: 23  KVVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILSGLVQSKLSTKKENSGVR 82
           +VVDYLIDP VAGT  GDPDSLSM HSFPELWN+EKRFGS++ G ++SKLS K E     
Sbjct: 163 EVVDYLIDPFVAGTCGGDPDSLSMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGP 222

Query: 83  NGTTGKRKPTRGSFSFQNGMQTLTDTLSKELGEDVLKLRSEVLSLSYNAGK-SASQNWSL 142
             T+  +K  RGSFSF  GMQTLTD + K+L ED L+L S VL LS +  + SA  +WS+
Sbjct: 223 PKTSANKKRQRGSFSFLGGMQTLTDAICKDLREDELRLNSRVLELSCSCTEDSAIDSWSI 282

Query: 143 TYSSDRNSKNLIADADAVIMTAPVCNVREMKFMKGGIPFPLNFLPEVAYLPLSVMITTFR 202
             +S    ++     DAVIMTAP+C+V+ MK  K G PF LNF+PEV Y+PLSV+ITTF+
Sbjct: 283 ISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAKRGNPFLLNFIPEVDYVPLSVVITTFK 342

Query: 203 KESVKRPLEGFGVLVPSLEQQNGLTTLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELA 262
           +E+VK PLEGFGVLVPS EQQ+GL TLGTLFSSMMFP+RA N+ YLYTTF+GGSRNRELA
Sbjct: 343 RENVKYPLEGFGVLVPSKEQQHGLKTLGTLFSSMMFPDRAPNNVYLYTTFVGGSRNRELA 402

Query: 263 KSSTDELKQIVTSDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKSLPG 322
           K+S  ELK+IVTSDL+QLLG EGEPT+VNH YWSKAFPLYG NYDSV+ AI+ MEK+LPG
Sbjct: 403 KASRTELKEIVTSDLKQLLGAEGEPTYVNHLYWSKAFPLYGHNYDSVLDAIDKMEKNLPG 462

Query: 323 FFYAGNHRDGLSVGKSIASGCKAADLVISYLES 355
            FYAGNHR GLSVGK+++SGC AADLVISYLES
Sbjct: 463 LFYAGNHRGGLSVGKALSSGCNAADLVISYLES 495

[Close]
BLAST of Carg24270 vs. Swiss-Prot
Match: sp|O24163|PPOC_TOBAC (Protoporphyrinogen oxidase, chloroplastic OS=Nicotiana tabacum OX=4097 GN=PPXI PE=2 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.1e-29
Identity = 105/356 (29.49%), Postives = 175/356 (49.16%), Query Frame = 0 

Query: 15  FIRLVLNFKVVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILSGLVQSKLST 74
           F+R  L  +V + LI+P  +G  AGDP  LSM  +F ++W +E+  GSI+ G  ++    
Sbjct: 208 FVRRNLGGEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWKLEETGGSIIGGTFKA---- 267

Query: 75  KKENSGVRNGTTGKRKP-TRGSF--SFQNGMQTLTDTLSKELGEDVLKLRSEVLSLSYNA 134
            KE S         R P  +G    SF+ G++ L D +S  LG   LKL  ++ S++   
Sbjct: 268 IKERSSTPKAPRDPRLPKPKGQTVGSFRKGLRMLPDAISARLGSK-LKLSWKLSSIT--- 327

Query: 135 GKSASQNWSLTYSSDRNSKNLIADADAVIMTAPVCNVREMKFMKGGIPFPLNF-----LP 194
            KS    + LTY +     +L   + +++MT P        ++   I  PL+      L 
Sbjct: 328 -KSEKGGYHLTYETPEGVVSL--QSRSIVMTVP-------SYVASNILRPLSVAAADALS 387

Query: 195 EVAYLPLSVMITTFRKESVK------RPLEGFGVLVPSLEQQNGLTTLGTLFSSMMFPNR 254
              Y P+  +  T+ +E+++        L+GFG L P   +  G+ TLGT++SS +FPNR
Sbjct: 388 NFYYPPVGAVTITYPQEAIRDERLVDGELKGFGQLHP---RTQGVETLGTIYSSSLFPNR 447

Query: 255 ASNDEYLYTTFIGGSRNRELAKSSTDELKQIVTSDLRQLL--GVEGEPTFVNHFYWSKAF 314
           A     L   +IGG++N E+   +  +L ++V  DLR++L      +P  V    W +A 
Sbjct: 448 APKGRVLLLNYIGGAKNPEILSKTESQLVEVVDRDLRKMLIKPKAQDPLVVGVRVWPQAI 507

Query: 315 PLY-GRNYDSVVKAIETM-EKSLPGFFYAGNHRDGLSVGKSIASGCKAADLVISYL 353
           P +   + D++  A   M +  L G F  GN+  G+++G+ +    + A  V  +L
Sbjct: 508 PQFLVGHLDTLSTAKAAMNDNGLEGLFLGGNYVSGVALGRCVEGAYEVASEVTGFL 542

[Close]
BLAST of Carg24270 vs. Swiss-Prot
Match: sp|Q9AR38|PPOC_ORYSJ (Protoporphyrinogen oxidase, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PPOX1 PE=2 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 1.5e-27
Identity = 100/356 (28.09%), Postives = 174/356 (48.88%), Query Frame = 0 

Query: 15  FIRLVLNFKVVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILSGLVQSKLST 74
           F+R  L  +V + LI+P  +G  AGDP  LSM  +F ++W +E   GSI+ G +++    
Sbjct: 196 FVRRNLGAEVFERLIEPFCSGVYAGDPSKLSMKAAFGKVWRLEDTGGSIIGGTIKTIQER 255

Query: 75  KKENSGVRNGTTGKRKPT---RGSFSFQNGMQTLTDTLSKELGEDVLKLRSEVLSLSYNA 134
            K     R+     R PT   +   SF+ G+  L D ++  LG  V KL  ++ S++   
Sbjct: 256 GKNPKPPRD----PRLPTPKGQTVASFRKGLTMLPDAITSRLGSKV-KLSWKLTSIT--- 315

Query: 135 GKSASQNWSLTYSSDRNSKNLIADADAVIMTAPVCNVREMKFMKGGIPFPL-----NFLP 194
            KS ++ ++L Y +     ++   A  V+MT P        ++   I  PL     + L 
Sbjct: 316 -KSDNKGYALVYETPEGVVSV--QAKTVVMTIP-------SYVASDILRPLSSDAADALS 375

Query: 195 EVAYLPLSVMITTFRKESVKR------PLEGFGVLVPSLEQQNGLTTLGTLFSSMMFPNR 254
              Y P++ +  ++ KE++++       L+GFG L P   +  G+ TLGT++SS +FPNR
Sbjct: 376 IFYYPPVAAVTVSYPKEAIRKECLIDGELQGFGQLHP---RSQGVETLGTIYSSSLFPNR 435

Query: 255 ASNDEYLYTTFIGGSRNRELAKSSTDELKQIVTSDLRQLL--GVEGEPTFVNHFYWSKAF 314
           A     L   +IGGS N  +   +  EL + V  DLR++L      +P  +    W +A 
Sbjct: 436 APAGRVLLLNYIGGSTNTGIVSKTESELVEAVDRDLRKMLINPKAVDPLVLGVRVWPQAI 495

Query: 315 PLYGRNYDSVVKAIETM--EKSLPGFFYAGNHRDGLSVGKSIASGCKAADLVISYL 353
           P +   +   ++A ++   +    G F  GN+  G+++G+ +    ++A  +  YL
Sbjct: 496 PQFLIGHLDHLEAAKSALGKGGYDGLFLGGNYVAGVALGRCVEGAYESASQISDYL 530

[Close]
BLAST of Carg24270 vs. TrEMBL
Match: tr|A0A1S3B382|A0A1S3B382_CUCME (Protoporphyrinogen oxidase OS=Cucumis melo OX=3656 GN=LOC103485496 PE=3 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 9.6e-176
Identity = 317/340 (93.24%), Postives = 326/340 (95.88%), Query Frame = 0 

Query: 23  KVVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILSGLVQSKLSTKKENSGVR 82
           +VVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSIL+GLV SK STKKE+ GVR
Sbjct: 165 EVVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILAGLVLSKFSTKKESGGVR 224

Query: 83  NGTTGKRKPTRGSFSFQNGMQTLTDTLSKELGEDVLKLRSEVLSLSYNAGKSASQNWSLT 142
           NGTT KRKP RGSFSFQNGMQTLTDTLSKELGED LKLRSEVLSLSYNAGK ASQNWSL 
Sbjct: 225 NGTTEKRKPRRGSFSFQNGMQTLTDTLSKELGEDALKLRSEVLSLSYNAGKYASQNWSLI 284

Query: 143 YSSDRNSKNLIADADAVIMTAPVCNVREMKFMKGGIPFPLNFLPEVAYLPLSVMITTFRK 202
           YS D+NSK+LI  ADAVIMTAPVC+VREMKFMKGGIPFPLNFLPEVAY+PLSVMITTFRK
Sbjct: 285 YSKDKNSKDLI--ADAVIMTAPVCSVREMKFMKGGIPFPLNFLPEVAYMPLSVMITTFRK 344

Query: 203 ESVKRPLEGFGVLVPSLEQQNGLTTLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK 262
           ESVKRPLEGFGVLVPSLEQQNGL TLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK
Sbjct: 345 ESVKRPLEGFGVLVPSLEQQNGLRTLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK 404

Query: 263 SSTDELKQIVTSDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKSLPGF 322
           SSTDELKQIVT+DLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEK+LPGF
Sbjct: 405 SSTDELKQIVTTDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKNLPGF 464

Query: 323 FYAGNHRDGLSVGKSIASGCKAADLVISYLESSTHQPCAE 363
           FYAGNHRDGLSVGKSIASGCKAADLVISYLESST Q CAE
Sbjct: 465 FYAGNHRDGLSVGKSIASGCKAADLVISYLESSTDQSCAE 502

[Close]
BLAST of Carg24270 vs. TrEMBL
Match: tr|A0A1S4DU35|A0A1S4DU35_CUCME (Protoporphyrinogen oxidase OS=Cucumis melo OX=3656 GN=LOC103485496 PE=3 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 9.6e-176
Identity = 317/340 (93.24%), Postives = 326/340 (95.88%), Query Frame = 0 

Query: 23  KVVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILSGLVQSKLSTKKENSGVR 82
           +VVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSIL+GLV SK STKKE+ GVR
Sbjct: 108 EVVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILAGLVLSKFSTKKESGGVR 167

Query: 83  NGTTGKRKPTRGSFSFQNGMQTLTDTLSKELGEDVLKLRSEVLSLSYNAGKSASQNWSLT 142
           NGTT KRKP RGSFSFQNGMQTLTDTLSKELGED LKLRSEVLSLSYNAGK ASQNWSL 
Sbjct: 168 NGTTEKRKPRRGSFSFQNGMQTLTDTLSKELGEDALKLRSEVLSLSYNAGKYASQNWSLI 227

Query: 143 YSSDRNSKNLIADADAVIMTAPVCNVREMKFMKGGIPFPLNFLPEVAYLPLSVMITTFRK 202
           YS D+NSK+LI  ADAVIMTAPVC+VREMKFMKGGIPFPLNFLPEVAY+PLSVMITTFRK
Sbjct: 228 YSKDKNSKDLI--ADAVIMTAPVCSVREMKFMKGGIPFPLNFLPEVAYMPLSVMITTFRK 287

Query: 203 ESVKRPLEGFGVLVPSLEQQNGLTTLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK 262
           ESVKRPLEGFGVLVPSLEQQNGL TLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK
Sbjct: 288 ESVKRPLEGFGVLVPSLEQQNGLRTLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK 347

Query: 263 SSTDELKQIVTSDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKSLPGF 322
           SSTDELKQIVT+DLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEK+LPGF
Sbjct: 348 SSTDELKQIVTTDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKNLPGF 407

Query: 323 FYAGNHRDGLSVGKSIASGCKAADLVISYLESSTHQPCAE 363
           FYAGNHRDGLSVGKSIASGCKAADLVISYLESST Q CAE
Sbjct: 408 FYAGNHRDGLSVGKSIASGCKAADLVISYLESSTDQSCAE 445

[Close]
BLAST of Carg24270 vs. TrEMBL
Match: tr|A0A1S4DU02|A0A1S4DU02_CUCME (Protoporphyrinogen oxidase OS=Cucumis melo OX=3656 GN=LOC103485496 PE=3 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 9.6e-176
Identity = 317/340 (93.24%), Postives = 326/340 (95.88%), Query Frame = 0 

Query: 23  KVVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILSGLVQSKLSTKKENSGVR 82
           +VVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSIL+GLV SK STKKE+ GVR
Sbjct: 146 EVVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILAGLVLSKFSTKKESGGVR 205

Query: 83  NGTTGKRKPTRGSFSFQNGMQTLTDTLSKELGEDVLKLRSEVLSLSYNAGKSASQNWSLT 142
           NGTT KRKP RGSFSFQNGMQTLTDTLSKELGED LKLRSEVLSLSYNAGK ASQNWSL 
Sbjct: 206 NGTTEKRKPRRGSFSFQNGMQTLTDTLSKELGEDALKLRSEVLSLSYNAGKYASQNWSLI 265

Query: 143 YSSDRNSKNLIADADAVIMTAPVCNVREMKFMKGGIPFPLNFLPEVAYLPLSVMITTFRK 202
           YS D+NSK+LI  ADAVIMTAPVC+VREMKFMKGGIPFPLNFLPEVAY+PLSVMITTFRK
Sbjct: 266 YSKDKNSKDLI--ADAVIMTAPVCSVREMKFMKGGIPFPLNFLPEVAYMPLSVMITTFRK 325

Query: 203 ESVKRPLEGFGVLVPSLEQQNGLTTLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK 262
           ESVKRPLEGFGVLVPSLEQQNGL TLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK
Sbjct: 326 ESVKRPLEGFGVLVPSLEQQNGLRTLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK 385

Query: 263 SSTDELKQIVTSDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKSLPGF 322
           SSTDELKQIVT+DLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEK+LPGF
Sbjct: 386 SSTDELKQIVTTDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKNLPGF 445

Query: 323 FYAGNHRDGLSVGKSIASGCKAADLVISYLESSTHQPCAE 363
           FYAGNHRDGLSVGKSIASGCKAADLVISYLESST Q CAE
Sbjct: 446 FYAGNHRDGLSVGKSIASGCKAADLVISYLESSTDQSCAE 483

[Close]
BLAST of Carg24270 vs. TrEMBL
Match: tr|A0A1S3B3W8|A0A1S3B3W8_CUCME (Protoporphyrinogen oxidase OS=Cucumis melo OX=3656 GN=LOC103485496 PE=3 SV=1)

HSP 1 Score: 625.2 bits (1611), Expect = 9.6e-176
Identity = 317/340 (93.24%), Postives = 326/340 (95.88%), Query Frame = 0 

Query: 23  KVVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILSGLVQSKLSTKKENSGVR 82
           +VVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSIL+GLV SK STKKE+ GVR
Sbjct: 160 EVVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILAGLVLSKFSTKKESGGVR 219

Query: 83  NGTTGKRKPTRGSFSFQNGMQTLTDTLSKELGEDVLKLRSEVLSLSYNAGKSASQNWSLT 142
           NGTT KRKP RGSFSFQNGMQTLTDTLSKELGED LKLRSEVLSLSYNAGK ASQNWSL 
Sbjct: 220 NGTTEKRKPRRGSFSFQNGMQTLTDTLSKELGEDALKLRSEVLSLSYNAGKYASQNWSLI 279

Query: 143 YSSDRNSKNLIADADAVIMTAPVCNVREMKFMKGGIPFPLNFLPEVAYLPLSVMITTFRK 202
           YS D+NSK+LI  ADAVIMTAPVC+VREMKFMKGGIPFPLNFLPEVAY+PLSVMITTFRK
Sbjct: 280 YSKDKNSKDLI--ADAVIMTAPVCSVREMKFMKGGIPFPLNFLPEVAYMPLSVMITTFRK 339

Query: 203 ESVKRPLEGFGVLVPSLEQQNGLTTLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK 262
           ESVKRPLEGFGVLVPSLEQQNGL TLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK
Sbjct: 340 ESVKRPLEGFGVLVPSLEQQNGLRTLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK 399

Query: 263 SSTDELKQIVTSDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKSLPGF 322
           SSTDELKQIVT+DLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEK+LPGF
Sbjct: 400 SSTDELKQIVTTDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKNLPGF 459

Query: 323 FYAGNHRDGLSVGKSIASGCKAADLVISYLESSTHQPCAE 363
           FYAGNHRDGLSVGKSIASGCKAADLVISYLESST Q CAE
Sbjct: 460 FYAGNHRDGLSVGKSIASGCKAADLVISYLESSTDQSCAE 497

[Close]
BLAST of Carg24270 vs. TrEMBL
Match: tr|A0A0A0K7K1|A0A0A0K7K1_CUCSA (Protoporphyrinogen oxidase OS=Cucumis sativus OX=3659 GN=Csa_6G007980 PE=3 SV=1)

HSP 1 Score: 619.0 bits (1595), Expect = 6.8e-174
Identity = 314/340 (92.35%), Postives = 324/340 (95.29%), Query Frame = 0 

Query: 23  KVVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSILSGLVQSKLSTKKENSGVR 82
           +VVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSI +GLV SKLSTKKE+ GVR
Sbjct: 160 EVVDYLIDPIVAGTSAGDPDSLSMSHSFPELWNIEKRFGSIFAGLVLSKLSTKKESGGVR 219

Query: 83  NGTTGKRKPTRGSFSFQNGMQTLTDTLSKELGEDVLKLRSEVLSLSYNAGKSASQNWSLT 142
           NGTTGK KP RGSFSFQNGMQTLTDTLSKELGE VLKLRSEVLSLSYNAGK ASQNWSL 
Sbjct: 220 NGTTGKSKPRRGSFSFQNGMQTLTDTLSKELGEGVLKLRSEVLSLSYNAGKYASQNWSLI 279

Query: 143 YSSDRNSKNLIADADAVIMTAPVCNVREMKFMKGGIPFPLNFLPEVAYLPLSVMITTFRK 202
           YS D+NSK+LI  ADAVIMTAPVC+VREMKFMKGGIPF LNFLPEVAY+PLSVMITTFRK
Sbjct: 280 YSKDKNSKDLI--ADAVIMTAPVCSVREMKFMKGGIPFSLNFLPEVAYMPLSVMITTFRK 339

Query: 203 ESVKRPLEGFGVLVPSLEQQNGLTTLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK 262
           ESVKRPLEGFGVLVPS EQQNGL TLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK
Sbjct: 340 ESVKRPLEGFGVLVPSSEQQNGLRTLGTLFSSMMFPNRASNDEYLYTTFIGGSRNRELAK 399

Query: 263 SSTDELKQIVTSDLRQLLGVEGEPTFVNHFYWSKAFPLYGRNYDSVVKAIETMEKSLPGF 322
           SSTDELKQIVT+DLRQLLGVEGEPTF+NHFYWSKAFPLYGRNYDSVVKAIETMEK+LPGF
Sbjct: 400 SSTDELKQIVTTDLRQLLGVEGEPTFINHFYWSKAFPLYGRNYDSVVKAIETMEKNLPGF 459

Query: 323 FYAGNHRDGLSVGKSIASGCKAADLVISYLESSTHQPCAE 363
           FYAGNHRDGLSVGKSIASGCKAADLVISYLESST Q CAE
Sbjct: 460 FYAGNHRDGLSVGKSIASGCKAADLVISYLESSTDQSCAE 497

The following BLAST results are available for this feature:
BLAST of Carg24270 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022938648.12.2e-19299.42protoporphyrinogen oxidase 2, chloroplastic/mitochondrial isoform X4 [Cucurbita ... [more]
XP_022938645.12.2e-19299.42protoporphyrinogen oxidase 2, chloroplastic/mitochondrial isoform X2 [Cucurbita ... [more]
XP_022938650.12.2e-19299.42protoporphyrinogen oxidase 2, chloroplastic/mitochondrial isoform X6 [Cucurbita ... [more]
XP_022938647.12.2e-19299.42protoporphyrinogen oxidase 2, chloroplastic/mitochondrial isoform X3 [Cucurbita ... [more]
XP_022938652.12.2e-19299.42protoporphyrinogen oxidase, chloroplastic/mitochondrial isoform X8 [Cucurbita mo... [more]
BLAST of Carg24270 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G14220.12.7e-12867.76Flavin containing amine oxidoreductase family[more]
AT4G01690.11.6e-2728.81Flavin containing amine oxidoreductase family[more]
BLAST of Carg24270 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q94IG7|PPOCM_SPIOL4.8e-13071.99Protoporphyrinogen oxidase 2 OS=Spinacia oleracea OX=3562 GN=POX2 PE=1 SV=1[more]
sp|Q8S9J1|PPOCM_ARATH5.0e-12767.76Protoporphyrinogen oxidase 2, chloroplastic/mitochondrial OS=Arabidopsis thalian... [more]
sp|O24164|PPOM_TOBAC3.0e-12467.57Protoporphyrinogen oxidase, mitochondrial OS=Nicotiana tabacum OX=4097 GN=PPXII ... [more]
sp|O24163|PPOC_TOBAC2.1e-2929.49Protoporphyrinogen oxidase, chloroplastic OS=Nicotiana tabacum OX=4097 GN=PPXI P... [more]
sp|Q9AR38|PPOC_ORYSJ1.5e-2728.09Protoporphyrinogen oxidase, chloroplastic OS=Oryza sativa subsp. japonica OX=399... [more]
BLAST of Carg24270 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3B382|A0A1S3B382_CUCME9.6e-17693.24Protoporphyrinogen oxidase OS=Cucumis melo OX=3656 GN=LOC103485496 PE=3 SV=1[more]
tr|A0A1S4DU35|A0A1S4DU35_CUCME9.6e-17693.24Protoporphyrinogen oxidase OS=Cucumis melo OX=3656 GN=LOC103485496 PE=3 SV=1[more]
tr|A0A1S4DU02|A0A1S4DU02_CUCME9.6e-17693.24Protoporphyrinogen oxidase OS=Cucumis melo OX=3656 GN=LOC103485496 PE=3 SV=1[more]
tr|A0A1S3B3W8|A0A1S3B3W8_CUCME9.6e-17693.24Protoporphyrinogen oxidase OS=Cucumis melo OX=3656 GN=LOC103485496 PE=3 SV=1[more]
tr|A0A0A0K7K1|A0A0A0K7K1_CUCSA6.8e-17492.35Protoporphyrinogen oxidase OS=Cucumis sativus OX=3659 GN=Csa_6G007980 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004729oxygen-dependent protoporphyrinogen oxidase activity
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0006779porphyrin-containing compound biosynthetic process
GO:0055114oxidation-reduction process
Vocabulary: INTERPRO
TermDefinition
IPR004572Protoporphyrinogen_oxidase
IPR036188FAD/NAD-bd_sf
IPR002937Amino_oxidase
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015994 chlorophyll metabolic process
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0006779 porphyrin-containing compound biosynthetic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0004729 oxygen-dependent protoporphyrinogen oxidase activity
molecular_function GO:0016491 oxidoreductase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24270-RACarg24270-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002937Amine oxidasePFAMPF01593Amino_oxidasecoord: 9..349
e-value: 2.4E-43
score: 149.0
NoneNo IPR availableGENE3DG3DSA:1.10.3110.10coord: 11..73
e-value: 2.6E-16
score: 61.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..99
NoneNo IPR availablePANTHERPTHR42923FAMILY NOT NAMEDcoord: 21..358
NoneNo IPR availablePANTHERPTHR42923:SF14PROTOPORPHYRINOGEN OXIDASE 2, CHLOROPLASTIC/MITOCHONDRIALcoord: 21..358
NoneNo IPR availableSUPERFAMILYSSF54373FAD-linked reductases, C-terminal domaincoord: 190..299
IPR036188FAD/NAD(P)-binding domain superfamilyGENE3DG3DSA:3.50.50.60coord: 101..212
e-value: 1.7E-20
score: 75.7
coord: 239..363
e-value: 4.5E-23
score: 84.1
IPR036188FAD/NAD(P)-binding domain superfamilySUPERFAMILYSSF51905FAD/NAD(P)-binding domaincoord: 317..348
coord: 18..205
IPR004572Protoporphyrinogen oxidaseTIGRFAMTIGR00562TIGR00562coord: 23..353
e-value: 1.9E-41
score: 140.1

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg24270Cla006520Watermelon (97103) v1carwmB1010
Carg24270MELO3C008208Melon (DHL92) v3.5.1carmeB0983
Carg24270Lsi03G003820Bottle gourd (USVL1VR-Ls)carlsiB924
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg24270Silver-seed gourdcarcarB027
Carg24270Cucurbita maxima (Rimu)carcmaB1402
Carg24270Cucurbita maxima (Rimu)carcmaB1403
Carg24270Cucurbita moschata (Rifu)carcmoB1359
Carg24270Cucurbita moschata (Rifu)carcmoB1360
Carg24270Cucurbita pepo (Zucchini)carcpeB1407
Carg24270Cucurbita pepo (Zucchini)carcpeB1408
Carg24270Melon (DHL92) v3.6.1carmedB0993
Carg24270Watermelon (Charleston Gray)carwcgB0985
Carg24270Watermelon (97103) v2carwmbB1068
Carg24270Wax gourdcarwgoB1187