Carg24267 (gene) Silver-seed gourd

NameCarg24267
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionvon willebrand factor A domain protein
LocationCucurbita_argyrosperma_scaffold_352 : 71476 .. 72384 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATGGTGGTGGAGCAGCGGCGCGCCCCATGCTTGGATCTTGTGGTAAGACGATTATCCATCCGATAATGATGAGATTCCGCCCGATTGCGCCTAAGCCTGTCGTCGGAGCCTCTGTTTCCCTTGGTACATCGTCAGTAGACAGCAAGAACTCCTCGATTTCCAAACCACGGACGAAGAGGAAGTACGTTAGGGTTAGGAGATATAATAGGAAGAAGAAAACTACGAGGAACACCACCGGCAGTACCGACGGTAACAAAAACGGCGAGTTCGTGGATCGTACGGCGCCGACGACGACGACACTGCAACTGCTACCGGAGCGACATATAGAGTTGGTTGGCGGTGGCGGCAGATCTGAGTGGTCGGAGAAGAAAAGGGAAGTTGGGAGGATGGAAAACGACGTAGTATTGGTATCAGATCCGAAACGTGGAGCGTTGGAGTTGTGGGTAACGGTGGAATGCGTGAGGGAGGCATGCATGGATCTGGAAGTGGAGGAGGGAGAGATAGGGTGCACGGACGAGGAGAGGATAAAGAATCTAGAAGAGGACACGTGTCCGGGGTTCATATCGAACGGGATGAATAGAGTGGAGTGGTTGAACAAGGCATTCAAGAGGATGGTAAGGCAAAAAAGGGAAAGGGAAAGGCAAGAGGAAACGAGAAGCGGGAGTGAGTCAGGAGGAGCAGCAGAAGTAGCGGTGTGGTTGATATCAAACCCAAAACTGGGTATGACCAGCCGAGTGTTTAGCTGCCAAATAAAGCTGCAGTTCAAAAGAGACACCGAAATGGAGAAGGACTCCAAAGTGGTGCCCTGTGACGCCTGGAGATTGGACCGCGGTGGATTTGCATGGAAACTAGACGTCAAAGCCGCCCTCACTTTGGCTCCTTTTCTTCCAGAGGATTTTTATTGA

mRNA sequence

ATGGATGGTGGTGGAGCAGCGGCGCGCCCCATGCTTGGATCTTGTGGTAAGACGATTATCCATCCGATAATGATGAGATTCCGCCCGATTGCGCCTAAGCCTGTCGTCGGAGCCTCTGTTTCCCTTGGTACATCGTCAGTAGACAGCAAGAACTCCTCGATTTCCAAACCACGGACGAAGAGGAAGTACGTTAGGGTTAGGAGATATAATAGGAAGAAGAAAACTACGAGGAACACCACCGGCAGTACCGACGGTAACAAAAACGGCGAGTTCGTGGATCGTACGGCGCCGACGACGACGACACTGCAACTGCTACCGGAGCGACATATAGAGTTGGTTGGCGGTGGCGGCAGATCTGAGTGGTCGGAGAAGAAAAGGGAAGTTGGGAGGATGGAAAACGACGTAGTATTGGTATCAGATCCGAAACGTGGAGCGTTGGAGTTGTGGGTAACGGTGGAATGCGTGAGGGAGGCATGCATGGATCTGGAAGTGGAGGAGGGAGAGATAGGGTGCACGGACGAGGAGAGGATAAAGAATCTAGAAGAGGACACGTGTCCGGGGTTCATATCGAACGGGATGAATAGAGTGGAGTGGTTGAACAAGGCATTCAAGAGGATGGTAAGGCAAAAAAGGGAAAGGGAAAGGCAAGAGGAAACGAGAAGCGGGAGTGAGTCAGGAGGAGCAGCAGAAGTAGCGGTGTGGTTGATATCAAACCCAAAACTGGGTATGACCAGCCGAGTGTTTAGCTGCCAAATAAAGCTGCAGTTCAAAAGAGACACCGAAATGGAGAAGGACTCCAAAGTGGTGCCCTGTGACGCCTGGAGATTGGACCGCGGTGGATTTGCATGGAAACTAGACGTCAAAGCCGCCCTCACTTTGGCTCCTTTTCTTCCAGAGGATTTTTATTGA

Coding sequence (CDS)

ATGGATGGTGGTGGAGCAGCGGCGCGCCCCATGCTTGGATCTTGTGGTAAGACGATTATCCATCCGATAATGATGAGATTCCGCCCGATTGCGCCTAAGCCTGTCGTCGGAGCCTCTGTTTCCCTTGGTACATCGTCAGTAGACAGCAAGAACTCCTCGATTTCCAAACCACGGACGAAGAGGAAGTACGTTAGGGTTAGGAGATATAATAGGAAGAAGAAAACTACGAGGAACACCACCGGCAGTACCGACGGTAACAAAAACGGCGAGTTCGTGGATCGTACGGCGCCGACGACGACGACACTGCAACTGCTACCGGAGCGACATATAGAGTTGGTTGGCGGTGGCGGCAGATCTGAGTGGTCGGAGAAGAAAAGGGAAGTTGGGAGGATGGAAAACGACGTAGTATTGGTATCAGATCCGAAACGTGGAGCGTTGGAGTTGTGGGTAACGGTGGAATGCGTGAGGGAGGCATGCATGGATCTGGAAGTGGAGGAGGGAGAGATAGGGTGCACGGACGAGGAGAGGATAAAGAATCTAGAAGAGGACACGTGTCCGGGGTTCATATCGAACGGGATGAATAGAGTGGAGTGGTTGAACAAGGCATTCAAGAGGATGGTAAGGCAAAAAAGGGAAAGGGAAAGGCAAGAGGAAACGAGAAGCGGGAGTGAGTCAGGAGGAGCAGCAGAAGTAGCGGTGTGGTTGATATCAAACCCAAAACTGGGTATGACCAGCCGAGTGTTTAGCTGCCAAATAAAGCTGCAGTTCAAAAGAGACACCGAAATGGAGAAGGACTCCAAAGTGGTGCCCTGTGACGCCTGGAGATTGGACCGCGGTGGATTTGCATGGAAACTAGACGTCAAAGCCGCCCTCACTTTGGCTCCTTTTCTTCCAGAGGATTTTTATTGA

Protein sequence

MDGGGAAARPMLGSCGKTIIHPIMMRFRPIAPKPVVGASVSLGTSSVDSKNSSISKPRTKRKYVRVRRYNRKKKTTRNTTGSTDGNKNGEFVDRTAPTTTTLQLLPERHIELVGGGGRSEWSEKKREVGRMENDVVLVSDPKRGALELWVTVECVREACMDLEVEEGEIGCTDEERIKNLEEDTCPGFISNGMNRVEWLNKAFKRMVRQKRERERQEETRSGSESGGAAEVAVWLISNPKLGMTSRVFSCQIKLQFKRDTEMEKDSKVVPCDAWRLDRGGFAWKLDVKAALTLAPFLPEDFY
BLAST of Carg24267 vs. NCBI nr
Match: XP_022938665.1 (uncharacterized protein LOC111444824 [Cucurbita moschata] >XP_022938666.1 uncharacterized protein LOC111444824 [Cucurbita moschata])

HSP 1 Score: 589.7 bits (1519), Expect = 5.5e-165
Identity = 300/302 (99.34%), Postives = 300/302 (99.34%), Query Frame = 0

Query: 1   MDGGGAAARPMLGSCGKTIIHPIMMRFRPIAPKPVVGASVSLGTSSVDSKNSSISKPRTK 60
           MDGGGAAARPMLGSCGKTIIHPIMMRFRPIAPKPVVG SVSLGTSSVDSKNSSISKPRTK
Sbjct: 1   MDGGGAAARPMLGSCGKTIIHPIMMRFRPIAPKPVVGPSVSLGTSSVDSKNSSISKPRTK 60

Query: 61  RKYVRVRRYNRKKKTTRNXTGSTDGNKNGEFVDRTAPTTTTLQLLPERHIELVGGGGRSE 120
           RKYVRVRRYNRKKKTTRNX GSTDGNKNGEFVDRTAPTTTTLQLLPERHIELVGGGGRSE
Sbjct: 61  RKYVRVRRYNRKKKTTRNXXGSTDGNKNGEFVDRTAPTTTTLQLLPERHIELVGGGGRSE 120

Query: 121 WSEKKREVGRMENDVVLVSDPKRGALELWVTVECVREACMDLEVEEGEIGCTDEERIKNL 180
           WSEKKREVGRMENDVVLVSDPKRGALELWVTVECVREACMDLEVEEGEIGCTDEERIKNL
Sbjct: 121 WSEKKREVGRMENDVVLVSDPKRGALELWVTVECVREACMDLEVEEGEIGCTDEERIKNL 180

Query: 181 EEDTCPGFISNGMNRVEWLNKAFKRMVRQKRERXXXXXTRSGSESGGAAEVAVWLISNPK 240
           EEDTCPGFISNGMNRVEWLNKAFKRMVRQKRERXXXXXTRSGSESGGAAEVAVWLISNPK
Sbjct: 181 EEDTCPGFISNGMNRVEWLNKAFKRMVRQKRERXXXXXTRSGSESGGAAEVAVWLISNPK 240

Query: 241 LGMTSRVFSCQIKLQFKRDTEMEKDSKVVPCDAWRLDRGGFAWKLDVKAALTLAPFLPED 300
           LGMTSRVFSCQIKLQFKRDTEMEKDSKVVPCDAWRLDRGGFAWKLDVKAALTLAPFLPED
Sbjct: 241 LGMTSRVFSCQIKLQFKRDTEMEKDSKVVPCDAWRLDRGGFAWKLDVKAALTLAPFLPED 300

Query: 301 FY 303
           FY
Sbjct: 301 FY 302

BLAST of Carg24267 vs. NCBI nr
Match: XP_022992618.1 (uncharacterized protein LOC111488911 [Cucurbita maxima] >XP_022992619.1 uncharacterized protein LOC111488911 [Cucurbita maxima])

HSP 1 Score: 557.8 bits (1436), Expect = 2.3e-155
Identity = 285/303 (94.06%), Postives = 289/303 (95.38%), Query Frame = 0

Query: 1   MDGGGAAARPMLGSCGKTIIHPIMMRFRPIAPKPVVGASVSLGTSSVDSKNSSISKPRTK 60
           MDGGGAAARPMLGSCGKTIIHPIMMRFRPIAPKPVVG SVSLGTSSVDSK SSISKPRTK
Sbjct: 1   MDGGGAAARPMLGSCGKTIIHPIMMRFRPIAPKPVVGGSVSLGTSSVDSKTSSISKPRTK 60

Query: 61  RKYVRVRRYNRKKKTTRNXTGSTDGNKNGEFVDRTA-PTTTTLQLLPERHIELVGGGGRS 120
           RKYVRVRRYNRKKKTT  X   TDGNKNGEFVDRTA PTTTTLQLLPERHIELVGGGGRS
Sbjct: 61  RKYVRVRRYNRKKKTTXXXXXXTDGNKNGEFVDRTAPPTTTTLQLLPERHIELVGGGGRS 120

Query: 121 EWSEKKREVGRMENDVVLVSDPKRGALELWVTVECVREACMDLEVEEGEIGCTDEERIKN 180
           EWSEKKREVGRMENDVVLVSDPKRGALELWVTVECVREACMDLEVEEGEIGCTDEERIKN
Sbjct: 121 EWSEKKREVGRMENDVVLVSDPKRGALELWVTVECVREACMDLEVEEGEIGCTDEERIKN 180

Query: 181 LEEDTCPGFISNGMNRVEWLNKAFKRMVRQKRERXXXXXTRSGSESGGAAEVAVWLISNP 240
           L+EDTCPGF+SNGMNRVEWLNKAFKRMVRQKR+R     TRSGSES GAAEVAVWLISNP
Sbjct: 181 LDEDTCPGFVSNGMNRVEWLNKAFKRMVRQKRQR--QEQTRSGSES-GAAEVAVWLISNP 240

Query: 241 KLGMTSRVFSCQIKLQFKRDTEMEKDSKVVPCDAWRLDRGGFAWKLDVKAALTLAPFLPE 300
           KLGMTSRVFSCQIKLQFKRDTEMEKDSKVVPCDAWRL+RGGFAWKLDVKAALTLAPFLPE
Sbjct: 241 KLGMTSRVFSCQIKLQFKRDTEMEKDSKVVPCDAWRLNRGGFAWKLDVKAALTLAPFLPE 300

Query: 301 DFY 303
           DFY
Sbjct: 301 DFY 300

BLAST of Carg24267 vs. NCBI nr
Match: XP_023551035.1 (uncharacterized protein LOC111808988 [Cucurbita pepo subsp. pepo] >XP_023551036.1 uncharacterized protein LOC111808988 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 510.0 bits (1312), Expect = 5.6e-141
Identity = 267/302 (88.41%), Postives = 267/302 (88.41%), Query Frame = 0

Query: 1   MDGGGAAARPMLGSCGKTIIHPIMMRFRPIAPKPVVGASVSLGTSSVDSKNSSISKPRTK 60
           MDGGGAAARPMLGSCGKTIIHPIMMRFRPIAPKPVVG SVSLGTSSVDSKNSSISKPRTK
Sbjct: 1   MDGGGAAARPMLGSCGKTIIHPIMMRFRPIAPKPVVGPSVSLGTSSVDSKNSSISKPRTK 60

Query: 61  RKYVRVRRYNRKKKTTRNXTGSTDGNKNGEFVDRTAPTTTTLQLLPERHIELVGGGGRSE 120
           RKYVRVRRYNR       X                         LPERHIELVGGGGRSE
Sbjct: 61  RKYVRVRRYNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPERHIELVGGGGRSE 120

Query: 121 WSEKKREVGRMENDVVLVSDPKRGALELWVTVECVREACMDLEVEEGEIGCTDEERIKNL 180
           WSEKKREV RMENDVVLVSDPKRGALELWVTVECVREACMDLEVEEGEIGCTDEERIKNL
Sbjct: 121 WSEKKREVERMENDVVLVSDPKRGALELWVTVECVREACMDLEVEEGEIGCTDEERIKNL 180

Query: 181 EEDTCPGFISNGMNRVEWLNKAFKRMVRQKRERXXXXXTRSGSESGGAAEVAVWLISNPK 240
           EEDTCPGFISNGMNRVEWLNKAFKRMVRQKRERXXXXXTRSGSESGGAAEVAVWLISNPK
Sbjct: 181 EEDTCPGFISNGMNRVEWLNKAFKRMVRQKRERXXXXXTRSGSESGGAAEVAVWLISNPK 240

Query: 241 LGMTSRVFSCQIKLQFKRDTEMEKDSKVVPCDAWRLDRGGFAWKLDVKAALTLAPFLPED 300
           LGMTS VFSCQIKLQFKRDTEMEKDSKVVPCDAWRLDRGGFAWKLDVKAALTLAPFLPED
Sbjct: 241 LGMTSPVFSCQIKLQFKRDTEMEKDSKVVPCDAWRLDRGGFAWKLDVKAALTLAPFLPED 300

Query: 301 FY 303
           FY
Sbjct: 301 FY 302

BLAST of Carg24267 vs. NCBI nr
Match: XP_008441369.1 (PREDICTED: uncharacterized protein LOC103485503 [Cucumis melo])

HSP 1 Score: 287.0 bits (733), Expect = 7.6e-74
Identity = 179/321 (55.76%), Postives = 203/321 (63.24%), Query Frame = 0

Query: 1   MDGGGAAA-RPMLGSCG-----KTIIHPIMMRFRPIAPKPVVGASVSLGTSSVDSK--NS 60
           MDGG AA+ R ++GSC      K II+PIMMRFRPIAPKP+ G S+    SS+DSK  NS
Sbjct: 1   MDGGDAASTRRLIGSCTGGSNCKPIINPIMMRFRPIAPKPLPGGSI---PSSLDSKNNNS 60

Query: 61  SISKPRTKRKYVRVRRYNRKKKTTRNXTGSTDGNKNGEFVDRTAPTTTTLQLLPERHIEL 120
           SISK RTKRKYVRVR           X                                 
Sbjct: 61  SISKGRTKRKYVRVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 VGGGGRSEWSEKKREVGRMENDVVLVSDPKRG-ALELWVTVECVREACMDLEVEEGEIGC 180
                    + ++     ME ++ LVSDPK G  +ELWVTVECV +ACMDLE+ EGEIGC
Sbjct: 121 XXXXXXXXXTGRR----MMEKEMRLVSDPKGGVGVELWVTVECVTDACMDLELREGEIGC 180

Query: 181 TDEERIKNLEEDTCPGFISNGMNRVEWLNKAFKRMVRQKRERXXXXXTRSG--------- 240
           TDEERIKNLE+DTCPGF+S+GMNRVEWLNKAFKRMV Q+   XXXXX             
Sbjct: 181 TDEERIKNLEKDTCPGFVSDGMNRVEWLNKAFKRMVWQRXXXXXXXXXXXXXXXXXXKGD 240

Query: 241 --SESGGAAEVAVWLISNPKLGMTSRVFSCQIKLQFKRDTEMEKDSKVVPCDAWRLDRGG 300
              +    AEV+VWLIS PKL    RVF+CQIKLQFKR TEMEKDS+VVPCDAWR+D GG
Sbjct: 241 CEGDCESPAEVSVWLISKPKLPNMRRVFTCQIKLQFKRGTEMEKDSRVVPCDAWRMDGGG 300

Query: 301 FAWKLDVKAALTLAPFLPEDF 302
           FAWKLDVKAALTLAP L EDF
Sbjct: 301 FAWKLDVKAALTLAPLLQEDF 314

BLAST of Carg24267 vs. NCBI nr
Match: XP_004138488.1 (PREDICTED: uncharacterized protein LOC101219072 [Cucumis sativus] >KGN45723.1 hypothetical protein Csa_6G008060 [Cucumis sativus])

HSP 1 Score: 276.9 bits (707), Expect = 7.9e-71
Identity = 178/325 (54.77%), Postives = 196/325 (60.31%), Query Frame = 0

Query: 1   MDGGGAAA-RPMLGSCG-----KTIIHPIMMRFRPIAPKPVVGASVSLGTSSVDSK--NS 60
           MDGG AA+ R M+GSC      K I++PIMMRFRPIAPKP+ G SV    SS+DSK  NS
Sbjct: 1   MDGGEAASTRRMIGSCTGGSNCKPILNPIMMRFRPIAPKPLPGGSV---PSSLDSKNNNS 60

Query: 61  SISKPRTKRKYVRVRRYNRKKKTTRNXTGSTDGNKNGEFVDRTAPTTTTLQLLPERHIEL 120
           SISK RTKRKYVRVR           X                                 
Sbjct: 61  SISKGRTKRKYVRVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 VGGGGRSEWSEKKREVGRMENDVVLVSDPKRG-ALELWVTVECVREACMDLEVEEGEIGC 180
                             ME ++ LVSDPK G  +ELWVTVECVR+ACMDLE+ EGEIGC
Sbjct: 121 XXXXXTGR--------RMMEKEMRLVSDPKGGVGVELWVTVECVRDACMDLELREGEIGC 180

Query: 181 TDEERIKNLEEDTCPGFISNGMNRVEWLNKAFKRMVRQK---------------RERXXX 240
           TDEERIKNLE DTCPGF+S+GMNRVEWLNKAFKRMV Q+                  XXX
Sbjct: 181 TDEERIKNLEMDTCPGFVSDGMNRVEWLNKAFKRMVWQRXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXTRSGSESGGAAEVAVWLISNPKLGMTSRVFSCQIKLQFKRDTEMEKDSKVVPCDAWRL 300
           XX             +VWLIS PKL    RVF+CQIKLQFKR TEMEKDS+VVPCDAWR+
Sbjct: 241 XXXXXXXXXXXXXXXSVWLISKPKLPNMRRVFTCQIKLQFKRGTEMEKDSRVVPCDAWRM 300

Query: 301 DRGGFAWKLDVKAALTLAPFLPEDF 302
           D GGFAWKLDVKAALTLAP L EDF
Sbjct: 301 DGGGFAWKLDVKAALTLAPLLQEDF 314

BLAST of Carg24267 vs. TAIR10
Match: AT3G27250.1 (unknown protein)

HSP 1 Score: 139.4 bits (350), Expect = 3.6e-33
Identity = 96/292 (32.88%), Postives = 148/292 (50.68%), Query Frame = 0

Query: 17  KTIIHPIMMRFRPIAPKPVVGASVSLGTSSVDSKNSSISKPRTKRKYVRVRRYNRKKKTT 76
           K  +  +M+R+RPIAPKP  G     G +  ++ +S     RTKRKYVRV + N+     
Sbjct: 19  KVSVDALMLRYRPIAPKPTTGQ--PCGVADNNNNSSYGMSKRTKRKYVRVSKNNKGTCRG 78

Query: 77  RNXTGSTDGNKNGEFVDRTAPTTTTLQLLPER----------HIELVGGGGRSEWSEKKR 136
           ++ +  +D        DR      TLQLLPE+            + +    +S   E+ +
Sbjct: 79  KSRSDLSD--------DREQTDVVTLQLLPEKSDISGEYSPLDQDSLDPSVKSIIGEETQ 138

Query: 137 EVGRMENDVVLVSDPKRGALELWVTVECVREACMDLEVEEGEIGCTDEERIKNLEEDTCP 196
           E     N   + +      +E WVTVE V   C +  +    +G TD E + NL +DTCP
Sbjct: 139 ET----NTWGMFNGSVTAEMETWVTVESVTSVC-EGSLSSHAVGITDVEIVDNLGKDTCP 198

Query: 197 GFISNGMNRVEWLNKAFKRMVRQKRERXXXXXTRSGSESGGAA--EVAVWLI---SNPKL 256
            F+S+G NRV W+N+A++R V             SG +S  +   EV VWL+   +   +
Sbjct: 199 AFVSDGSNRVVWVNEAYRRNV-------------SGDDSTASVSPEVVVWLVAEEATAAM 258

Query: 257 GMTSRVFSCQIKLQFKRDTEMEKDSKVVPCDAWRLDRGGFAWKLDVKAALTL 294
               + F+C++++Q+    +  K +K VPCD W+++ GGFAW+LD  AALTL
Sbjct: 259 HCNYQAFTCRVRMQY--TWKETKYTKTVPCDVWKMEFGGFAWRLDTTAALTL 280

BLAST of Carg24267 vs. TAIR10
Match: AT5G40800.1 (unknown protein)

HSP 1 Score: 135.2 bits (339), Expect = 6.7e-32
Identity = 99/293 (33.79%), Postives = 145/293 (49.49%), Query Frame = 0

Query: 17  KTIIHPIMMRFRPIAPKPVVGASVSLGTSSVDSKNSSISKPRTKRKYVRVRRYNR---KK 76
           KT +  +M+++RPIAPKP       +G +S        S  RTKRKYVRV + N+   + 
Sbjct: 20  KTSVDTLMLKYRPIAPKPTTTGQPLVGDTS--------STRRTKRKYVRVSKNNKATCRS 79

Query: 77  KTTRNXTGSTDGNKNGEFVDRTAPTTTTLQLLPERHIELVGGGGRSEWSEKKREVGRMEN 136
           KT    + STD     E +        TLQLLPER   L       + +     V  +  
Sbjct: 80  KTNGFRSSSTDPENGREDI-------VTLQLLPERSTPL-----SLDHNNLDPTVETING 139

Query: 137 DVVLVSDP-----------KRGALELWVTVECVREACMDLEVEEGEIGCTDEERIKNLEE 196
           D    +D            ++  +E WVTVE V    +        +G TDEE    L++
Sbjct: 140 DETCNTDTWLKFNGGDDALQQVPVETWVTVESVNSGLV-----SHAVGLTDEELTYALDK 199

Query: 197 DTCPGFISNGMNRVEWLNKAFKRMVRQKRERXXXXXTRSGSESGGAAEVAVWLISNPKLG 256
           DTCPGFIS+G NRV  +N+A++R+V                + G   EV VWL+ +    
Sbjct: 200 DTCPGFISDGSNRVVMVNEAYRRIVT--------------GDGGFGREVIVWLVVDQTAT 259

Query: 257 MTS-RVFSCQIKLQFK-RDTEMEKDSKVVPCDAWRLDRGGFAWKLDVKAALTL 294
               R F+C++++++  R+T   K +K +PCD W+++ GGFAW+LD  AALTL
Sbjct: 260 FCDYRTFTCKVRMEYTWRET---KYTKTLPCDVWKMEFGGFAWRLDTTAALTL 270

BLAST of Carg24267 vs. TAIR10
Match: AT5G40790.1 (unknown protein)

HSP 1 Score: 132.9 bits (333), Expect = 3.3e-31
Identity = 105/309 (33.98%), Postives = 150/309 (48.54%), Query Frame = 0

Query: 17  KTIIHPIMMRFRPIAPKPVVGASVSLGTSSVDSKNSSISKPRTKRKYVRVR------RYN 76
           KT+I  IM RFRPIAPKP VG S    +   +S        R+KRKYVRVR        N
Sbjct: 21  KTVISKIMQRFRPIAPKPAVGES----SDDTNSDRFLGRNRRSKRKYVRVRDKKNSSGSN 80

Query: 77  RKKKTTRNXTG------STDGNKNGEFVDRTAPTTTTLQLLPERHIELVGGGGR-----S 136
            KK  T    G       TD +K  +  DRT     TLQLLPE+  ++   G +     S
Sbjct: 81  NKKDITGKKNGCDRGNIKTDLDKKIDGDDRT--DIVTLQLLPEKDRDIGNNGDKAGEFCS 140

Query: 137 EWSEKKREVGRMENDVVLVSDPKRGALELWVTVECVREACMDLE-----VEEGEIGCTDE 196
           + S+   +     + + L S   R  +E W+TVECV + C DL       + G +   +E
Sbjct: 141 DLSDMDPKKSLYNSIIGLSSSFDRKVVESWLTVECVSDTCTDLGWYHILEQLGRMDQAEE 200

Query: 197 ERIKNLEEDTCPGFISNGMNRVEWLNKAFKRMVRQKRERXXXXXTRSGSESGGAAEV--- 256
             ++ LE DTCP  +S+G NRV W+N+A++RM+                   GA +V   
Sbjct: 201 RVMRMLEVDTCPWLVSDGSNRVCWVNRAYRRMM-------------------GAPDVDVI 260

Query: 257 AVWLISNPKLGMTSR-------VFSCQIKLQFKRDTEMEKDSKVVPCDAWRLDRGGFAWK 294
            VWL+    L              +C+++++++  T  +     VPCD WR+  GGFAW+
Sbjct: 261 RVWLVVAMDLMEEIACMVELYGAVTCRVRVRYEPSTWRK---MTVPCDVWRIRSGGFAWR 301

BLAST of Carg24267 vs. TAIR10
Match: AT5G63350.1 (unknown protein)

HSP 1 Score: 121.7 bits (304), Expect = 7.7e-28
Identity = 114/333 (34.23%), Postives = 147/333 (44.14%), Query Frame = 0

Query: 1   MDGGGAAARPMLGS----CGKTIIHPIMMRFRPIAPKPVV-GASVSLGTSSVDS------ 60
           MDG G       G      G +    IM+RFRPIAPKP   G SVSL   S  +      
Sbjct: 1   MDGRGGCCIARYGGYGGRYGLSKADRIMLRFRPIAPKPASDGGSVSLTGKSGSTXXXXXX 60

Query: 61  -KNSSISKPRTKRKYVR------VRRYNRKKKTTRNXTGSTDGNKNGEFVDRTAPTTTTL 120
                    R KRKY +       RR N+KK+     T +T              T  TL
Sbjct: 61  XXXXXXXXXRGKRKYQKDCSGGNSRRCNKKKRDLSGDTATT--------------TAVTL 120

Query: 121 QLLPERHIELV----------------------GGGGRSEWSEKKREVGRMENDVVLVSD 180
            LLPE   + V                       GGG      K  E+ R     V+VS 
Sbjct: 121 SLLPETPEKRVFPDLNAFPVEKQKRNGPLWLSFNGGGEILTPYKTAEISRR---TVVVSS 180

Query: 181 PKRGALELWVTVECVREACMDLEVEEGEIGCTDEERIKNLEEDTCPGFISNGMNRVEWLN 240
                    VTVE V +A +D       +G T++ER  NL EDTCPGFIS+G+ RV W N
Sbjct: 181 --------CVTVERVTDAWID----GYGLGETNQERKMNLVEDTCPGFISDGVGRVTWTN 240

Query: 241 KAFKRMVRQKRERXXXXXTRSGSESGGAAEVAVWLISNPKLGMTSRVFSCQIKLQFKRDT 294
           +A+K+M R+               S     V V L+   +  +T   F+C+++LQ+    
Sbjct: 241 EAYKKMAREDINIPMEEGVPE-DISYDNFHVNVRLVMKERPMLTYPAFTCRVRLQYTCQ- 300

BLAST of Carg24267 vs. TAIR10
Match: AT3G48510.1 (unknown protein)

HSP 1 Score: 119.8 bits (299), Expect = 2.9e-27
Identity = 104/303 (34.32%), Postives = 146/303 (48.18%), Query Frame = 0

Query: 3   GGGAAARPMLGSCGKTI--IHPIMMRFRPIAPKPVVGASVSLGTSSVDSKNSSISKPRTK 62
           GG   AR  +GS    +     IM+RFRPIAPKP     V+  +S      SS    R+ 
Sbjct: 5   GGCCIARYAIGSGPYDLSKADRIMLRFRPIAPKPASPGGVNPVSSGDSGGGSSDVSFRSA 64

Query: 63  RKYVRVRRYNRKKKTTRNXTGSTDGNKNGEFVDRTAPTTTTLQLLPERHIELVGGGGRSE 122
            +  R R+ ++ K+   N    T    + + V   +    TL LLPE+ I+L     + +
Sbjct: 65  SR--RKRKCHQLKENGGNAKRCTRRKTSDKPVVHGSANAVTLSLLPEKPIDLKAAVEKQK 124

Query: 123 -----WSEKKREVGRMENDVVLVSDPKRG-ALELWVTVECVREACMDLEVEEGEIGCTDE 182
                W   K   G +          +R   +   +TVE V +A +D       +G +DE
Sbjct: 125 RQGPLWLSFKDGGGMLTPAYQTPEIVQRTVVISSCMTVERVTDAWID----GYGLGRSDE 184

Query: 183 ERIKNLEEDTCPGFISNGMNRVEWLNKAFKRMVRQKRERXXXXXTRSGS---ESGGAAEV 242
           ER  NL  DTCPGFIS+G  RV W N A+++M R             G+    SG +  V
Sbjct: 185 ERKMNLVRDTCPGFISDGSGRVTWTNDAYRKMARD------IIPVEEGAPEITSGDSFHV 244

Query: 243 AVWLISNPKLGMTSRVFSCQIKLQFKRDTEMEKDSKVVPCDAWRLD-RGGFAWKLDVKAA 294
            V L+   +  +TS  F+C++KLQ+      E+ S  VPCD WR+D  GGFAW+LDVKAA
Sbjct: 245 IVRLVMRERPMLTSPGFTCRMKLQYTCQNR-ERGSVTVPCDVWRMDVGGGFAWRLDVKAA 294

BLAST of Carg24267 vs. TrEMBL
Match: tr|A0A1S3B3A6|A0A1S3B3A6_CUCME (uncharacterized protein LOC103485503 OS=Cucumis melo OX=3656 GN=LOC103485503 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 5.1e-74
Identity = 179/321 (55.76%), Postives = 203/321 (63.24%), Query Frame = 0

Query: 1   MDGGGAAA-RPMLGSCG-----KTIIHPIMMRFRPIAPKPVVGASVSLGTSSVDSK--NS 60
           MDGG AA+ R ++GSC      K II+PIMMRFRPIAPKP+ G S+    SS+DSK  NS
Sbjct: 1   MDGGDAASTRRLIGSCTGGSNCKPIINPIMMRFRPIAPKPLPGGSI---PSSLDSKNNNS 60

Query: 61  SISKPRTKRKYVRVRRYNRKKKTTRNXTGSTDGNKNGEFVDRTAPTTTTLQLLPERHIEL 120
           SISK RTKRKYVRVR           X                                 
Sbjct: 61  SISKGRTKRKYVRVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 VGGGGRSEWSEKKREVGRMENDVVLVSDPKRG-ALELWVTVECVREACMDLEVEEGEIGC 180
                    + ++     ME ++ LVSDPK G  +ELWVTVECV +ACMDLE+ EGEIGC
Sbjct: 121 XXXXXXXXXTGRR----MMEKEMRLVSDPKGGVGVELWVTVECVTDACMDLELREGEIGC 180

Query: 181 TDEERIKNLEEDTCPGFISNGMNRVEWLNKAFKRMVRQKRERXXXXXTRSG--------- 240
           TDEERIKNLE+DTCPGF+S+GMNRVEWLNKAFKRMV Q+   XXXXX             
Sbjct: 181 TDEERIKNLEKDTCPGFVSDGMNRVEWLNKAFKRMVWQRXXXXXXXXXXXXXXXXXXKGD 240

Query: 241 --SESGGAAEVAVWLISNPKLGMTSRVFSCQIKLQFKRDTEMEKDSKVVPCDAWRLDRGG 300
              +    AEV+VWLIS PKL    RVF+CQIKLQFKR TEMEKDS+VVPCDAWR+D GG
Sbjct: 241 CEGDCESPAEVSVWLISKPKLPNMRRVFTCQIKLQFKRGTEMEKDSRVVPCDAWRMDGGG 300

Query: 301 FAWKLDVKAALTLAPFLPEDF 302
           FAWKLDVKAALTLAP L EDF
Sbjct: 301 FAWKLDVKAALTLAPLLQEDF 314

BLAST of Carg24267 vs. TrEMBL
Match: tr|A0A0A0K8B5|A0A0A0K8B5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G008060 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 5.2e-71
Identity = 178/325 (54.77%), Postives = 196/325 (60.31%), Query Frame = 0

Query: 1   MDGGGAAA-RPMLGSCG-----KTIIHPIMMRFRPIAPKPVVGASVSLGTSSVDSK--NS 60
           MDGG AA+ R M+GSC      K I++PIMMRFRPIAPKP+ G SV    SS+DSK  NS
Sbjct: 1   MDGGEAASTRRMIGSCTGGSNCKPILNPIMMRFRPIAPKPLPGGSV---PSSLDSKNNNS 60

Query: 61  SISKPRTKRKYVRVRRYNRKKKTTRNXTGSTDGNKNGEFVDRTAPTTTTLQLLPERHIEL 120
           SISK RTKRKYVRVR           X                                 
Sbjct: 61  SISKGRTKRKYVRVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 VGGGGRSEWSEKKREVGRMENDVVLVSDPKRG-ALELWVTVECVREACMDLEVEEGEIGC 180
                             ME ++ LVSDPK G  +ELWVTVECVR+ACMDLE+ EGEIGC
Sbjct: 121 XXXXXTGR--------RMMEKEMRLVSDPKGGVGVELWVTVECVRDACMDLELREGEIGC 180

Query: 181 TDEERIKNLEEDTCPGFISNGMNRVEWLNKAFKRMVRQK---------------RERXXX 240
           TDEERIKNLE DTCPGF+S+GMNRVEWLNKAFKRMV Q+                  XXX
Sbjct: 181 TDEERIKNLEMDTCPGFVSDGMNRVEWLNKAFKRMVWQRXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXTRSGSESGGAAEVAVWLISNPKLGMTSRVFSCQIKLQFKRDTEMEKDSKVVPCDAWRL 300
           XX             +VWLIS PKL    RVF+CQIKLQFKR TEMEKDS+VVPCDAWR+
Sbjct: 241 XXXXXXXXXXXXXXXSVWLISKPKLPNMRRVFTCQIKLQFKRGTEMEKDSRVVPCDAWRM 300

Query: 301 DRGGFAWKLDVKAALTLAPFLPEDF 302
           D GGFAWKLDVKAALTLAP L EDF
Sbjct: 301 DGGGFAWKLDVKAALTLAPLLQEDF 314

BLAST of Carg24267 vs. TrEMBL
Match: tr|A0A1R3KER4|A0A1R3KER4_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_08782 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 2.8e-48
Identity = 128/316 (40.51%), Postives = 179/316 (56.65%), Query Frame = 0

Query: 5   GAAARPMLGSCG----KTIIHPIMMRFRPIAPKPVVGASVSLGTSSVDSKNSSISKPRTK 64
           GA    ML   G    KT+I+ IM+RFRPIAPKPVVG  +  G +  D+KN  + KPRTK
Sbjct: 3   GAEKWSMLSYTGDSQDKTVINRIMLRFRPIAPKPVVG-EMGSGGAQFDNKNLLLCKPRTK 62

Query: 65  RKYVRVRRYN--RKKKTTRNXTGSTDGNKNGEFVDRTAPTTTTLQLLPER---------- 124
           RKYVRVR+ N  RKK+++ +     + +K+ E +        TLQLLPE+          
Sbjct: 63  RKYVRVRKNNIKRKKRSSSDQLHDEEASKDPEKI-------VTLQLLPEKTEANNGTISN 122

Query: 125 --HIELVGG---------GGRSEWSEKKREVGRMENDVVLVSDPKRGALELWVTVECVRE 184
                LVG             + W ++   V   +    ++   K   +E WVTVECV +
Sbjct: 123 QNGAVLVGNQDPPRFFNLNFSNGWIDRMGAVDGADRTAAMIQKRKVTVVESWVTVECVTD 182

Query: 185 ACMDLEVEEGEIGCTDEERIKNLEEDTCPGFISNGMNRVEWLNKAFKRMVRQKRERXXXX 244
            CM    E  E+G TD ER+KNLE DTCPGFIS+G+NRV+W+N A+KRM+          
Sbjct: 183 TCM----EGRELGSTDVERMKNLEADTCPGFISDGLNRVQWVNGAYKRML---------T 242

Query: 245 XTRSGSESGGAAEVAVWLISNPKLGMTSRVFSCQIKLQFKRDTEMEKDSKVVPCDAWRLD 294
             + G E G   E+ VW++   +L      FSC+++LQ+    + EK S+++PCD W++D
Sbjct: 243 VGKLGFE-GVTPEIMVWVVIKQELPRFCTAFSCKVRLQY--TWQKEKCSRMLPCDVWKMD 294

BLAST of Carg24267 vs. TrEMBL
Match: tr|A0A061EDM8|A0A061EDM8_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_017094 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.6e-46
Identity = 122/302 (40.40%), Postives = 170/302 (56.29%), Query Frame = 0

Query: 13  GSCGKTIIHPIMMRFRPIAPKPVVGASVSLGTSSVDSKNSSISKPRTKRKYVRVRRYNRK 72
           GS  KT+I+ IM+RFRPIAPKPV G + S G    D+KN  +SKPR KRKYVRVR+ N K
Sbjct: 15  GSLDKTVINGIMLRFRPIAPKPVAGETGS-GGGQFDNKNLLLSKPRAKRKYVRVRKNNIK 74

Query: 73  KKTTRNXTGSTDGNKNGEFVDRTAPTTTTLQLLPERH-------------IE-------L 132
           +K       S+  + + E V +      TLQLLPE+              +E       L
Sbjct: 75  RKKR-----SSSDHLHHEEVSKDPERIVTLQLLPEKTEANGSTINQNDAVLEENQGPPLL 134

Query: 133 VGGGGRSEWSEKKREVGRMENDVVLVSDPKRGALELWVTVECVREACMDLEVEEGEIGCT 192
                 + W ++   V   +  VV+    K   +E WVTVE V + CMD      E+G T
Sbjct: 135 FNLNFNNRWIDRMGVVEEPDQTVVVSQKRKVTVVESWVTVERVTDTCMD----GRELGST 194

Query: 193 DEERIKNLEEDTCPGFISNGMNRVEWLNKAFKRMVRQKRERXXXXXTRSGSESGGAAEVA 252
           D +R KNLE DTCPGFIS+G+N+V+W+N A+KRM+           T      G + ++ 
Sbjct: 195 DVDRTKNLEADTCPGFISDGLNKVQWVNGAYKRML-----------TVEEGNDGPSPDIM 254

Query: 253 VWLISNPKLGMTSRVFSCQIKLQFKRDTEMEKDSKVVPCDAWRLDRGG-FAWKLDVKAAL 294
           VWL+   +L      FSC+++LQ+    + EK S+++PCD W++D GG FAW+LDV+AAL
Sbjct: 255 VWLVMKQELPRFCTAFSCKVRLQY--TWQNEKYSRMLPCDVWKMDTGGCFAWRLDVEAAL 293

BLAST of Carg24267 vs. TrEMBL
Match: tr|A0A1R3HTK1|A0A1R3HTK1_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_17196 PE=4 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 2.6e-46
Identity = 127/316 (40.19%), Postives = 177/316 (56.01%), Query Frame = 0

Query: 5   GAAARPMLGSCG----KTIIHPIMMRFRPIAPKPVVGASVSLGTSSVDSKNSSISKPRTK 64
           GA    ML   G    KT+I+ IM+RFRPIAPKPVVG + S G +  D+KN  + KPRTK
Sbjct: 3   GAEKWSMLSYTGDSQDKTVINRIMLRFRPIAPKPVVGETGS-GGAQFDNKNLLLCKPRTK 62

Query: 65  RKYVRVRRYN--RKKKTTRNXTGSTDGNKNGEFVDRTAPTTTTLQLLPER---------- 124
           RKYVRVR+ N  RKK+++ +       +K+ E +        TLQLLPE+          
Sbjct: 63  RKYVRVRKNNIRRKKRSSSDQLHDEKASKDPEKI-------VTLQLLPEKTEANTGTINN 122

Query: 125 --HIELVGG---------GGRSEWSEKKREVGRMENDVVLVSDPKRGALELWVTVECVRE 184
                LVG             + W ++   V   +    ++   K   +E WVTVECV +
Sbjct: 123 QNGAVLVGNQDPPRFFNLNFSNGWIDRMGAVDEADRTAAVIQKRKVTVVESWVTVECVTD 182

Query: 185 ACMDLEVEEGEIGCTDEERIKNLEEDTCPGFISNGMNRVEWLNKAFKRMVRQKRERXXXX 244
            CM    E  E+G TD ER+KNLE DTCPGFIS+ +NRV+W+N A+KRM+          
Sbjct: 183 TCM----EGRELGSTDVERMKNLEADTCPGFISDSLNRVQWVNGAYKRML---------T 242

Query: 245 XTRSGSESGGAAEVAVWLISNPKLGMTSRVFSCQIKLQFKRDTEMEKDSKVVPCDAWRLD 294
             + G E G   E+ VW++   +L      FS +++LQ+    + EK S+++PCD W++D
Sbjct: 243 LGKLGFE-GVTPEIMVWVVIKQELPRFCTAFSLKVRLQY--TWQKEKCSRMLPCDVWKMD 294

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022938665.15.5e-16599.34uncharacterized protein LOC111444824 [Cucurbita moschata] >XP_022938666.1 unchar... [more]
XP_022992618.12.3e-15594.06uncharacterized protein LOC111488911 [Cucurbita maxima] >XP_022992619.1 uncharac... [more]
XP_023551035.15.6e-14188.41uncharacterized protein LOC111808988 [Cucurbita pepo subsp. pepo] >XP_023551036.... [more]
XP_008441369.17.6e-7455.76PREDICTED: uncharacterized protein LOC103485503 [Cucumis melo][more]
XP_004138488.17.9e-7154.77PREDICTED: uncharacterized protein LOC101219072 [Cucumis sativus] >KGN45723.1 hy... [more]
Match NameE-valueIdentityDescription
AT3G27250.13.6e-3332.88unknown protein[more]
AT5G40800.16.7e-3233.79unknown protein[more]
AT5G40790.13.3e-3133.98unknown protein[more]
AT5G63350.17.7e-2834.23unknown protein[more]
AT3G48510.12.9e-2734.32unknown protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3B3A6|A0A1S3B3A6_CUCME5.1e-7455.76uncharacterized protein LOC103485503 OS=Cucumis melo OX=3656 GN=LOC103485503 PE=... [more]
tr|A0A0A0K8B5|A0A0A0K8B5_CUCSA5.2e-7154.77Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G008060 PE=4 SV=1[more]
tr|A0A1R3KER4|A0A1R3KER4_9ROSI2.8e-4840.51Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_08782 PE=4 SV=1[more]
tr|A0A061EDM8|A0A061EDM8_THECC2.6e-4640.40Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_017094 PE=4 SV=1[more]
tr|A0A1R3HTK1|A0A1R3HTK1_COCAP2.6e-4640.19Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_17196 PE=4 ... [more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24267-RACarg24267-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 199..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..93
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 56..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..93
NoneNo IPR availablePANTHERPTHR33595FAMILY NOT NAMEDcoord: 8..293
NoneNo IPR availablePANTHERPTHR33595:SF4EMB|CAB62340.1coord: 8..293