Carg24240 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24240
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	zinc finger protein 830
Location	Cucurbita_argyrosperma_scaffold_191 : 174346 .. 175882 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGTCTAGCATTGTCTCACTTTTCAACATGTCTAATTTGATTTGTGCTCTTCCAGGAAAGGATGCTGAACCTGATTTACGCAGTGGTAGCATTGCACAGTCAGAGGTGATTGCAAAGGCCAGTGACCTTGGTAAGAAATCTTCTGTGAATGTTGGTTCAGAGGGGAAGCAAATAAAGGGAGCTCTGCCCGAAGGTTTCTTTGATGACAAAGAGGCTGATTTGCGTGCACATGGCATAAAACTTGTTAAGCCTGATGTCAAGTAGGTTCTTCCCACTTGTTATGAACTTTGTGTTTTTAATTCGGTATCTCAAGTGTTTCTAATCCTTTTATCACATGTAACAATTCTATCATGTTTCCTTGCTTGAAGGTAGGTGTTTTCATATTATCCTTAATATATTGAATTTGGTTTTATTTCTTATTTGTTCCTATATTTATTTGGCTGTAAATGCCAACCAGAGAGAATATTGGGAAATAGTTAACTGATGATGGCTGTGTCGTTAGTAATTCTCTATCTTGCTTCTGTTCGACATTTCCTGGTGTTTGCACTGATTTTGCATTTTCCAATAAACATCTATTTTCTTCAATATTGCTGTGGAGTCTCTGACCATTGATTGTGCCACTTAATATTGTTGACTAGGTCGCAGAATTGCATGGTGTATCATTTATGTTGACTCCCATTTAATTCTTACTACTTTTCCTTAAATATATGTATCTCTACTTCCACATATATCAGAGAACTGACAGCAACGATAGTGATGAAAACTGCAAATGGGGTTTTGCCTGTTGATTGTCTAAGAAATGATCTTATATGAACCTATGGAAAAAATGAGCAACCCTCTTGTTCAGCATTAATATATTGTTGTTGTGCATGCTCTTTTACTCCTTGTAATCTATGGCATGGGATTCCATAGGAGCTTGACTGTGTGTGCTTCATTATCAGAGATGAATACAAGGAATTTGAAAAGTTGATCCAAGAAGATTTGCAGGAGGTGGATAACCGTTTGGAAGAGGAGGAGGTAATGCCCAACTTGTATCCTTTCTCTGTCAATTAGTTGATTGAGGGTATTAGATTGGAGTTATTATACATTTTGTTGCTTTATGTACTACAGATTGATGCTGCCGAAATGATAGAGGAAGCTGAAACCTTAGAGCAGAAGTAAGTGAAGCACGTTAATTCCCGTGCCTTGTTCTTCTAATCTTCATTCCTGATTGCACCAAACTTTCTGGATTTCTGTTGACAGGGCCTACAGGGAGAGAGTAGAAAGGTTGAAGAGGAAGAAAATGGAGTTAAAGACCAAAAAATCAGTAGAACAAAGTAGAGCGGAGCCTGAAATTCCTACTAAAGAGTCTAGCCTTGACGATTCTTCGAGTGATGATGATAGTGACACAAATTATACAGTAGATTGGAGAGCTCAACACTTGTGATAGTAAGTTGATTCTAAATTTTTGATATCCTATAAGATGGGGAGAGAAGGAAGTGAATCATGTGATAATGTAGATATTGATTTGCTGTTCAACCACATTGTAGCTTGG

mRNA sequence

ATGTGGTCTAGCATTGTCTCACTTTTCAACATGTCTAATTTGATTTGTGCTCTTCCAGGAAAGGATGCTGAACCTGATTTACGCAGTGGTAGCATTGCACAGTCAGAGGTGATTGCAAAGGCCAGTGACCTTGGTAAGAAATCTTCTGTGAATGTTGGTTCAGAGGGGAAGCAAATAAAGGGAGCTCTGCCCGAAGGTTTCTTTGATGACAAAGAGGCTGATTTGCGTGCACATGGCATAAAACTTGTTAAGCCTGATGTCAAAGATGAATACAAGGAATTTGAAAAGTTGATCCAAGAAGATTTGCAGGAGGTGGATAACCGTTTGGAAGAGGAGGAGATTGATGCTGCCGAAATGATAGAGGAAGCTGAAACCTTAGAGCAGAAGGCCTACAGGGAGAGAGTAGAAAGGTTGAAGAGGAAGAAAATGGAGTTAAAGACCAAAAAATCAGTAGAACAAAGTAGAGCGGAGCCTGAAATTCCTACTAAAGAGTCTAGCCTTGACGATTCTTCGAGTGATGATGATAGTGACACAAATTATACAGTAGATTGGAGAGCTCAACACTTGTGATAGTAAGTTGATTCTAAATTTTTGATATCCTATAAGATGGGGAGAGAAGGAAGTGAATCATGTGATAATGTAGATATTGATTTGCTGTTCAACCACATTGTAGCTTGG

Coding sequence (CDS)

ATGTGGTCTAGCATTGTCTCACTTTTCAACATGTCTAATTTGATTTGTGCTCTTCCAGGAAAGGATGCTGAACCTGATTTACGCAGTGGTAGCATTGCACAGTCAGAGGTGATTGCAAAGGCCAGTGACCTTGGTAAGAAATCTTCTGTGAATGTTGGTTCAGAGGGGAAGCAAATAAAGGGAGCTCTGCCCGAAGGTTTCTTTGATGACAAAGAGGCTGATTTGCGTGCACATGGCATAAAACTTGTTAAGCCTGATGTCAAAGATGAATACAAGGAATTTGAAAAGTTGATCCAAGAAGATTTGCAGGAGGTGGATAACCGTTTGGAAGAGGAGGAGATTGATGCTGCCGAAATGATAGAGGAAGCTGAAACCTTAGAGCAGAAGGCCTACAGGGAGAGAGTAGAAAGGTTGAAGAGGAAGAAAATGGAGTTAAAGACCAAAAAATCAGTAGAACAAAGTAGAGCGGAGCCTGAAATTCCTACTAAAGAGTCTAGCCTTGACGATTCTTCGAGTGATGATGATAGTGACACAAATTATACAGTAGATTGGAGAGCTCAACACTTGTGA

Protein sequence

MWSSIVSLFNMSNLICALPGKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEMIEEAETLEQKAYRERVERLKRKKMELKTKKSVEQSRAEPEIPTKESSLDDSSSDDDSDTNYTVDWRAQHL

Homology

[Close]

BLAST of Carg24240 vs. NCBI nr
Match: XP_023529023.1 (zinc finger protein 830-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 277.3 bits (708), Expect = 3.8e-71
Identity = 156/170 (91.76%), Postives = 157/170 (92.35%), Query Frame = 0


Query: 20  GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHG 79
           GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGK+IKGALPEGFFDDKEADLRAHG
Sbjct: 134 GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKEIKGALPEGFFDDKEADLRAHG 193

Query: 80  IKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEMXXXXXXXXXKAYRERVERLX 139
           IKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEMXXXXXX   KAYRERVERL 
Sbjct: 194 IKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEMXXXXXXLEQKAYRERVERLK 253

Query: 140 XKKMELKTKKSVEQSRAEPEIPTKESSLDXXXXXXXXDTNYTVDWRAQHL 190
            KKMELKTKKSVEQSRAEPEIPTKESSLD        DTNYTVDWRAQHL
Sbjct: 254 RKKMELKTKKSVEQSRAEPEIPTKESSLDDSLSDDDSDTNYTVDWRAQHL 303

[Close]

BLAST of Carg24240 vs. NCBI nr
Match: XP_022934879.1 (zinc finger protein 830-like [Cucurbita moschata])

HSP 1 Score: 274.2 bits (700), Expect = 3.2e-70
Identity = 163/170 (95.88%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 20  GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHG 79
           GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHG
Sbjct: 134 GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHG 193

Query: 80  IKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEMXXXXXXXXXKAYRERVERLX 139
           IKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEMXXXXXX   KAYRERVERL 
Sbjct: 194 IKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEMXXXXXXLEQKAYRERVERLK 253

Query: 140 XKKMELKTKKSVEQSRAEPEIPTKESSLDXXXXXXXXDTNYTVDWRAQHL 190
            KKMELKTKKSVEQSRAEPEIPTKESSLD  XXXXXXDTNYTVDWRAQHL
Sbjct: 254 RKKMELKTKKSVEQSRAEPEIPTKESSLD-DXXXXXXDTNYTVDWRAQHL 302

[Close]

BLAST of Carg24240 vs. NCBI nr
Match: XP_022983328.1 (zinc finger protein 830-like [Cucurbita maxima])

HSP 1 Score: 271.9 bits (694), Expect = 1.6e-69
Identity = 154/170 (90.59%), Postives = 157/170 (92.35%), Query Frame = 0


Query: 20  GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHG 79
           GKDAEPDLRSGSIAQSE I KASDLGKKSS+NVGSEGKQIKG+LPEGFFDDKEADLRAHG
Sbjct: 134 GKDAEPDLRSGSIAQSEAITKASDLGKKSSMNVGSEGKQIKGSLPEGFFDDKEADLRAHG 193

Query: 80  IKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEMXXXXXXXXXKAYRERVERLX 139
           IKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEMXXXXXXXX KAYRERVERL 
Sbjct: 194 IKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEMXXXXXXXXQKAYRERVERLK 253

Query: 140 XKKMELKTKKSVEQSRAEPEIPTKESSLDXXXXXXXXDTNYTVDWRAQHL 190
            KKMELKTKK+VEQSRAEPEIPTKESSLD        DTNYTVDWRAQHL
Sbjct: 254 RKKMELKTKKTVEQSRAEPEIPTKESSLDDSLSDDDSDTNYTVDWRAQHL 303

[Close]

BLAST of Carg24240 vs. NCBI nr
Match: XP_004148048.1 (PREDICTED: zinc finger protein 830 [Cucumis sativus] >KGN62044.1 hypothetical protein Csa_2G292740 [Cucumis sativus])

HSP 1 Score: 237.7 bits (605), Expect = 3.3e-59
Identity = 139/171 (81.29%), Postives = 147/171 (85.96%), Query Frame = 0


Query: 20  GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHG 79
           GKD E D RSGSIAQS+VI KASDL KKSS+N GSEGKQIKGALPEGFFDDKEADLRAHG
Sbjct: 135 GKDIETDSRSGSIAQSQVIPKASDLNKKSSMNAGSEGKQIKGALPEGFFDDKEADLRAHG 194

Query: 80  IKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEMXXXXXXXXXKAYRERVERLX 139
           IKLVKPDVKDEYKEFEKLIQEDLQEVD+RLEEEEIDA   XXXXXXXX KAYRERVE L 
Sbjct: 195 IKLVKPDVKDEYKEFEKLIQEDLQEVDDRLEEEEIDAXXXXXXXXXXXQKAYRERVELLK 254

Query: 140 XKKMELKTKKSVEQSRAEPEIPTKESSLD-XXXXXXXXDTNYTVDWRAQHL 190
            KK+ELK+KKS EQSRAEP+IPTK+S +D         DTNYTVDWRAQHL
Sbjct: 255 RKKIELKSKKSAEQSRAEPQIPTKDSQVDYSSSDDDDSDTNYTVDWRAQHL 305

[Close]

BLAST of Carg24240 vs. NCBI nr
Match: XP_008457857.1 (PREDICTED: zinc finger protein 830 isoform X1 [Cucumis melo])

HSP 1 Score: 229.2 bits (583), Expect = 1.2e-56
Identity = 146/171 (85.38%), Postives = 150/171 (87.72%), Query Frame = 0


Query: 20  GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHG 79
           GKD   D RSGSIAQSEVI KASD  KKSS+N GSEGKQIKGALPEGFFDDKEADLRAHG
Sbjct: 132 GKDIVTDSRSGSIAQSEVIPKASDFNKKSSMNAGSEGKQIKGALPEGFFDDKEADLRAHG 191

Query: 80  IKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEMXXXXXXXXXKAYRERVERLX 139
           IKLVKPDVKDEYKEFEKLIQEDLQEVD+RLEEEEIDA   XXXXXXXXX AYRERVE L 
Sbjct: 192 IKLVKPDVKDEYKEFEKLIQEDLQEVDDRLEEEEIDAXXXXXXXXXXXXXAYRERVELLK 251

Query: 140 XKKMELKTKKSVEQSRAEPEIPTKESS-LDXXXXXXXXDTNYTVDWRAQHL 190
            KKMELKTKKS EQSRAEP+IPTK+S    XXXXXXXX TNYTVDWRAQHL
Sbjct: 252 RKKMELKTKKSAEQSRAEPQIPTKDSQXXXXXXXXXXXXTNYTVDWRAQHL 302

[Close]

BLAST of Carg24240 vs. TAIR10
Match: AT3G02860.2 (zinc ion binding)

HSP 1 Score: 66.6 bits (161), Expect = 1.8e-11
Identity = 33/39 (84.62%), Postives = 37/39 (94.87%), Query Frame = 0


Query: 75  LRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEE 114
           L AHGIKLVKPD+KDEYKEFEKLIQ+DLQ VD+R+EEEE
Sbjct: 198 LLAHGIKLVKPDIKDEYKEFEKLIQDDLQVVDSRMEEEE 236

[Close]

BLAST of Carg24240 vs. TrEMBL
Match: tr|A0A0A0LM08|A0A0A0LM08_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292740 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.2e-59
Identity = 139/171 (81.29%), Postives = 147/171 (85.96%), Query Frame = 0


Query: 20  GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHG 79
           GKD E D RSGSIAQS+VI KASDL KKSS+N GSEGKQIKGALPEGFFDDKEADLRAHG
Sbjct: 135 GKDIETDSRSGSIAQSQVIPKASDLNKKSSMNAGSEGKQIKGALPEGFFDDKEADLRAHG 194

Query: 80  IKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEMXXXXXXXXXKAYRERVERLX 139
           IKLVKPDVKDEYKEFEKLIQEDLQEVD+RLEEEEIDA   XXXXXXXX KAYRERVE L 
Sbjct: 195 IKLVKPDVKDEYKEFEKLIQEDLQEVDDRLEEEEIDAXXXXXXXXXXXQKAYRERVELLK 254

Query: 140 XKKMELKTKKSVEQSRAEPEIPTKESSLD-XXXXXXXXDTNYTVDWRAQHL 190
            KK+ELK+KKS EQSRAEP+IPTK+S +D         DTNYTVDWRAQHL
Sbjct: 255 RKKIELKSKKSAEQSRAEPQIPTKDSQVDYSSSDDDDSDTNYTVDWRAQHL 305

[Close]

BLAST of Carg24240 vs. TrEMBL
Match: tr|A0A1S3C6M3|A0A1S3C6M3_CUCME (zinc finger protein 830 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497442 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 7.8e-57
Identity = 146/171 (85.38%), Postives = 150/171 (87.72%), Query Frame = 0


Query: 20  GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHG 79
           GKD   D RSGSIAQSEVI KASD  KKSS+N GSEGKQIKGALPEGFFDDKEADLRAHG
Sbjct: 89  GKDIVTDSRSGSIAQSEVIPKASDFNKKSSMNAGSEGKQIKGALPEGFFDDKEADLRAHG 148

Query: 80  IKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEMXXXXXXXXXKAYRERVERLX 139
           IKLVKPDVKDEYKEFEKLIQEDLQEVD+RLEEEEIDA   XXXXXXXXX AYRERVE L 
Sbjct: 149 IKLVKPDVKDEYKEFEKLIQEDLQEVDDRLEEEEIDAXXXXXXXXXXXXXAYRERVELLK 208

Query: 140 XKKMELKTKKSVEQSRAEPEIPTKESS-LDXXXXXXXXDTNYTVDWRAQHL 190
            KKMELKTKKS EQSRAEP+IPTK+S    XXXXXXXX TNYTVDWRAQHL
Sbjct: 209 RKKMELKTKKSAEQSRAEPQIPTKDSQXXXXXXXXXXXXTNYTVDWRAQHL 259

[Close]

BLAST of Carg24240 vs. TrEMBL
Match: tr|A0A1S3C619|A0A1S3C619_CUCME (zinc finger protein 830 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497442 PE=4 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 7.8e-57
Identity = 146/171 (85.38%), Postives = 150/171 (87.72%), Query Frame = 0


Query: 20  GKDAEPDLRSGSIAQSEVIAKASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHG 79
           GKD   D RSGSIAQSEVI KASD  KKSS+N GSEGKQIKGALPEGFFDDKEADLRAHG
Sbjct: 132 GKDIVTDSRSGSIAQSEVIPKASDFNKKSSMNAGSEGKQIKGALPEGFFDDKEADLRAHG 191

Query: 80  IKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEMXXXXXXXXXKAYRERVERLX 139
           IKLVKPDVKDEYKEFEKLIQEDLQEVD+RLEEEEIDA   XXXXXXXXX AYRERVE L 
Sbjct: 192 IKLVKPDVKDEYKEFEKLIQEDLQEVDDRLEEEEIDAXXXXXXXXXXXXXAYRERVELLK 251

Query: 140 XKKMELKTKKSVEQSRAEPEIPTKESS-LDXXXXXXXXDTNYTVDWRAQHL 190
            KKMELKTKKS EQSRAEP+IPTK+S    XXXXXXXX TNYTVDWRAQHL
Sbjct: 252 RKKMELKTKKSAEQSRAEPQIPTKDSQXXXXXXXXXXXXTNYTVDWRAQHL 302

[Close]

BLAST of Carg24240 vs. TrEMBL
Match: tr|M5X1X1|M5X1X1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G048000 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.2e-35
Identity = 99/149 (66.44%), Postives = 106/149 (71.14%), Query Frame = 0


Query: 41  ASDLGKKSSVNVGSEGKQIKGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQE 100
           A DL + SS    SE KQIKGALPEGFFD+KEADL A GIKLVKPDVKDEYKEFEKLIQE
Sbjct: 159 ARDLTQTSSQIASSEAKQIKGALPEGFFDNKEADLSARGIKLVKPDVKDEYKEFEKLIQE 218

Query: 101 DLQEVDNRLEEEEIDAAEMXXXXXXXXXKAYRERVERLXXKKMELKTKKSVEQSRAEPEI 160
           DL+EVDNRLEEEEIDAA  XXXXX    + YRE+VE L  KKMELK   S  + R   EI
Sbjct: 219 DLKEVDNRLEEEEIDAAXXXXXXXSVEQRTYREKVELLRKKKMELKA-ASASKRRRVSEI 278

Query: 161 PTKESSLDXXXXXXXXDTNYTVDWRAQHL 190
             KE S D        D N+ VDWRAQHL
Sbjct: 279 VKKEPSHDESLSDSDSDENFAVDWRAQHL 306

[Close]

BLAST of Carg24240 vs. TrEMBL
Match: tr|A0A2I4EB68|A0A2I4EB68_9ROSI (zinc finger protein 830 OS=Juglans regia OX=51240 GN=LOC108988013 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.2e-35
Identity = 108/190 (56.84%), Postives = 124/190 (65.26%), Query Frame = 0


Query: 21  KDAEPDLRSGSI--AQSEVIAKASDLGKKSSVNV-------------------GSEGKQI 80
           K  EPDL    +  AQ E I  A ++ K  S NV                   G E KQ+
Sbjct: 142 KSLEPDLSKKMVTSAQPEEINLAIEIDKLPSANVAQDISVQSAGEHTTSVEIAGLEIKQV 201

Query: 81  KGALPEGFFDDKEADLRAHGIKLVKPDVKDEYKEFEKLIQEDLQEVDNRLEEEEIDAAEM 140
           KGALPEGFFD+KEADLRA GIKLVKPD+KDEYKEFEKLIQEDLQEVD+R EEEEIDAA  
Sbjct: 202 KGALPEGFFDNKEADLRARGIKLVKPDIKDEYKEFEKLIQEDLQEVDDRFEEEEIDAAXX 261

Query: 141 XXXXXXXXXKAYRERVERLXXKKMELKTKKSVEQSRAEPEIPTKESSLDXXXXXXXXDTN 190
           XXXXXXXX KAYRE+VE L  KK+EL+  +S +  +A  E+  KES+ D        D N
Sbjct: 262 XXXXXXXXQKAYREKVEMLRKKKLELQVARSSKHGKAS-EVVGKESNHDESSSDDDSDEN 321

The following BLAST results are available for this feature:

BLAST of Carg24240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023529023.1	3.8e-71	91.76	zinc finger protein 830-like [Cucurbita pepo subsp. pepo]	[more]
XP_022934879.1	3.2e-70	95.88	zinc finger protein 830-like [Cucurbita moschata]	[more]
XP_022983328.1	1.6e-69	90.59	zinc finger protein 830-like [Cucurbita maxima]	[more]
XP_004148048.1	3.3e-59	81.29	PREDICTED: zinc finger protein 830 [Cucumis sativus] >KGN62044.1 hypothetical pr...	[more]
XP_008457857.1	1.2e-56	85.38	PREDICTED: zinc finger protein 830 isoform X1 [Cucumis melo]	[more]

BLAST of Carg24240 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G02860.2	1.8e-11	84.62	zinc ion binding	[more]

BLAST of Carg24240 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg24240 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LM08\|A0A0A0LM08_CUCSA	2.2e-59	81.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292740 PE=4 SV=1	[more]
tr\|A0A1S3C6M3\|A0A1S3C6M3_CUCME	7.8e-57	85.38	zinc finger protein 830 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497442 PE=4 ...	[more]
tr\|A0A1S3C619\|A0A1S3C619_CUCME	7.8e-57	85.38	zinc finger protein 830 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497442 PE=4 ...	[more]
tr\|M5X1X1\|M5X1X1_PRUPE	2.2e-35	66.44	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G048000 PE=4 SV=1	[more]
tr\|A0A2I4EB68\|A0A2I4EB68_9ROSI	2.2e-35	56.84	zinc finger protein 830 OS=Juglans regia OX=51240 GN=LOC108988013 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24240-RA	Carg24240-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 95..155
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..169
None	No IPR available	PANTHER	PTHR13278	UNCHARACTERIZED	coord: 33..189

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg24240	Silver-seed gourd	carcarB213
Carg24240	Cucumber (Gy14) v2	carcgybB0190
Carg24240	Cucumber (Gy14) v1	carcgyB0216
Carg24240	Cucurbita maxima (Rimu)	carcmaB0240
Carg24240	Cucurbita maxima (Rimu)	carcmaB0241
Carg24240	Cucurbita moschata (Rifu)	carcmoB0248
Carg24240	Cucurbita moschata (Rifu)	carcmoB0249
Carg24240	Cucurbita pepo (Zucchini)	carcpeB0256
Carg24240	Cucurbita pepo (Zucchini)	carcpeB0257
Carg24240	Wild cucumber (PI 183967)	carcpiB0203
Carg24240	Cucumber (Chinese Long) v2	carcuB0196
Carg24240	Cucumber (Chinese Long) v3	carcucB0203
Carg24240	Bottle gourd (USVL1VR-Ls)	carlsiB158
Carg24240	Melon (DHL92) v3.5.1	carmeB0181
Carg24240	Melon (DHL92) v3.6.1	carmedB0185
Carg24240	Watermelon (Charleston Gray)	carwcgB0168
Carg24240	Watermelon (97103) v1	carwmB0166
Carg24240	Watermelon (97103) v2	carwmbB0181
Carg24240	Wax gourd	carwgoB0227