Carg24211 (gene) Silver-seed gourd

Overview
NameCarg24211
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionDUF1517 domain-containing protein
LocationCucurbita_argyrosperma_scaffold_225 : 271952 .. 273869 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCCGTTCCTCCATTGAAGTACACTCCAATCTTCCCCTCACCATGTCGTTGGCCTCATCGCAGCTCAGCTTTCTCTCCACCACCCTCTCCTTCTCCTCCGCCCCCACCCCTCGCCGGTCCAACAACATCCTCCATTCTTTCCATCCTATAATCGCCTCTAAACTTCCTCCCCACGCCGATGATCCTAAGTAAGTTCGATTCCGCGATTTCGTTTTAGTTTTGAGTCATTTAGGTTTCTGATTGATTGATTGAATCGATTTCTGGTTTTTTTTTATGTGTAGTGGATTAGAGAGGGGAAATGAGAATCGACTAGCGAAGCTTGCGATTGTTACTCTGGCGGCTGGGGTTTTGTCATTGGGATCGGTTCATGATGCGTCGGCCGCTAAGACCGGTGGCCGAGTTGGCGGCCAGGCGTTCCGGTCGGCGGCTCCCCGGTCTTCATCGCCGAGAATCAATAACAATTCCAGGTATCAAAGATTGCTAGTAATTTGCTTTGAATTTTGTTAGTTGAGTTGATGATTGGCTTGAACTTTGATGCTCTGTAGAACAGTATATGAACTGAAATTTATGAAACTATTACACAAATGATTGAGACTACATTGAAACTACAAATTATAATCATGAGATTTCTAGAAAAGTTAACTCAGAATCCATTTTAAATTTGATGGATATAATGTAAACTAAATTTGAATAGCTAAAAGTTTAAAGATTAAAATAGGATGAATTCTATAGTATAGAGACCGAAATGATAGTTTAAGTAGACCTTCGCAGTCTAGAGACAAGAGAACGAAATTGTTCTTGTACTTACACAATCTAGATGAAACAAAAACGTGTATTTTTTTGAAAATTACTTCATTTTGCTCGACTACTACTACGAAGGTCAAATCTTATACCTATTTATCTAGTAGGAAAATACGTCAAAAGATGTCAATATCGATTATCAATACATGTGAGCTTTCACCCCTGTTTGAATACATTAATGTATCAAATTATTCATGTATCTCAACTATTCATGTATTCAACATGTGTCTAGATTAGTTCAAACCGTATTAGCCATGGAAGGCTCGCTTCTTATGCTATAATCATTGCCCACACCTTAGAGTTTGAACTTTAGAAGCTTGAAAGATATCTCTAAACGGTTTACGCCCTTACTATAAGGGTCACTTTTGGGTGAATAAGAGTGTGTTTGAAATGACTTCTAAAGTGTTTAAAAAGACATTTTTAAATATAACCGCTTGTTTCTGATCTTACTTCTTATGCTATACTCATTGTCACACCTTACGAACTTTTGGAAAAGGCTTCCGCTATAACACTCTAAGAACTTAGAGCTTGAGCTTTAGAAGTTTGAAAGTATCTTTAAACCGTTTAAGCTTTTACTATAAAGTCACTTTTGAGCGAGTAAAAGTGTGTTTGAAATGACTTCTCAAGTGCTTAAAAAGACTCTTGCAAGTCAAACAGATCGTTTATGATATTACTTCTTATGCTTTACTCATTGTCCACACCTTGCTAACTTTTGGACAAGGCTTCCGCTACAACACTCTGAGAACTTAGAGCTTGAAAAGCTTGAAAAGCTTGAAAGATATCCTTAAACCGTTTAAGCCCTTACTATAAAGGTCACATTTGAGTCGTTTCCGATCTTGCTTCAAATCTATGTTGTGTGTTTGATTCGACAGGACAAATATCTACATAAACCCGAGAGTAGCGCCTCCTCTAGTAGGTGGGTATGGTTACGGTGTGCCATACTATGGAGGAGGATGGGGATGGTCGCCATTTTCATTCTTTGCACCAACCCCAAGTGTAGCTGTAGGCATTGGAGGAGGTTTTGATGTTCTTGTGCTCTTCATTTTTCTTGGAACTGTTGCAGCTTTTGTGAGAAGGTTCCTTGGAGGAAGAGGAGAAGATGATGATGATTATTAA

mRNA sequence

TCTCCGTTCCTCCATTGAAGTACACTCCAATCTTCCCCTCACCATGTCGTTGGCCTCATCGCAGCTCAGCTTTCTCTCCACCACCCTCTCCTTCTCCTCCGCCCCCACCCCTCGCCGGTCCAACAACATCCTCCATTCTTTCCATCCTATAATCGCCTCTAAACTTCCTCCCCACGCCGATGATCCTAATGGATTAGAGAGGGGAAATGAGAATCGACTAGCGAAGCTTGCGATTGTTACTCTGGCGGCTGGGGTTTTGTCATTGGGATCGGTTCATGATGCGTCGGCCGCTAAGACCGGTGGCCGAGTTGGCGGCCAGGCGTTCCGGTCGGCGGCTCCCCGGTCTTCATCGCCGAGAATCAATAACAATTCCAGGACAAATATCTACATAAACCCGAGAGTAGCGCCTCCTCTAGTAGGTGGGTATGGTTACGGTGTGCCATACTATGGAGGAGGATGGGGATGGTCGCCATTTTCATTCTTTGCACCAACCCCAAGTGTAGCTGTAGGCATTGGAGGAGGTTTTGATGTTCTTGTGCTCTTCATTTTTCTTGGAACTGTTGCAGCTTTTGTGAGAAGGTTCCTTGGAGGAAGAGGAGAAGATGATGATGATTATTAA

Coding sequence (CDS)

ATGTCGTTGGCCTCATCGCAGCTCAGCTTTCTCTCCACCACCCTCTCCTTCTCCTCCGCCCCCACCCCTCGCCGGTCCAACAACATCCTCCATTCTTTCCATCCTATAATCGCCTCTAAACTTCCTCCCCACGCCGATGATCCTAATGGATTAGAGAGGGGAAATGAGAATCGACTAGCGAAGCTTGCGATTGTTACTCTGGCGGCTGGGGTTTTGTCATTGGGATCGGTTCATGATGCGTCGGCCGCTAAGACCGGTGGCCGAGTTGGCGGCCAGGCGTTCCGGTCGGCGGCTCCCCGGTCTTCATCGCCGAGAATCAATAACAATTCCAGGACAAATATCTACATAAACCCGAGAGTAGCGCCTCCTCTAGTAGGTGGGTATGGTTACGGTGTGCCATACTATGGAGGAGGATGGGGATGGTCGCCATTTTCATTCTTTGCACCAACCCCAAGTGTAGCTGTAGGCATTGGAGGAGGTTTTGATGTTCTTGTGCTCTTCATTTTTCTTGGAACTGTTGCAGCTTTTGTGAGAAGGTTCCTTGGAGGAAGAGGAGAAGATGATGATGATTATTAA

Protein sequence

MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPHADDPNGLERGNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNSRTNIYINPRVAPPLVGGYGYGVPYYGGGWGWSPFSFFAPTPSVAVGIGGGFDVLVLFIFLGTVAAFVRRFLGGRGEDDDDY
Homology
[Close]
BLAST of Carg24211 vs. NCBI nr
Match: XP_022938204.1 (uncharacterized protein LOC111444353 [Cucurbita moschata])

HSP 1 Score: 268.1 bits (684), Expect = 2.3e-68
Identity = 190/191 (99.48%), Postives = 190/191 (99.48%), Query Frame = 0 

Query: 1   MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPHADDPNGLERGNENRLA 60
           MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPP ADDPNGLERGNENRLA
Sbjct: 1   MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPPADDPNGLERGNENRLA 60

Query: 61  KLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNSRTNIYINPRV 120
           KLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNSRTNIYINPRV
Sbjct: 61  KLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNSRTNIYINPRV 120

Query: 121 APPLVGGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTVAAFVRRF 180
           APPLVGGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTVAAFVRRF
Sbjct: 121 APPLVGGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTVAAFVRRF 180

Query: 181 LGGRGEDDDDY 192
           LGGRGEDDDDY
Sbjct: 181 LGGRGEDDDDY 191

[Close]
BLAST of Carg24211 vs. NCBI nr
Match: XP_023536753.1 (uncharacterized protein LOC111798034 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 265.4 bits (677), Expect = 1.5e-67
Identity = 189/190 (99.47%), Postives = 189/190 (99.47%), Query Frame = 0 

Query: 1   MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPHADDPNGLERGNENRLA 60
           MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPP ADDPNGLERGNENRLA
Sbjct: 1   MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPPADDPNGLERGNENRLA 60

Query: 61  KLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNSRTNIYINPRV 120
           KLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNSRTNIYINPRV
Sbjct: 61  KLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNSRTNIYINPRV 120

Query: 121 APPLVGGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTVAAFVRRF 180
           APPLVGGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTVAAFVRRF
Sbjct: 121 APPLVGGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTVAAFVRRF 180

Query: 181 LGGRGEDDDD 191
           LGGRGEDDDD
Sbjct: 181 LGGRGEDDDD 190

[Close]
BLAST of Carg24211 vs. NCBI nr
Match: XP_022969609.1 (uncharacterized protein LOC111468585 [Cucurbita maxima])

HSP 1 Score: 261.9 bits (668), Expect = 1.7e-66
Identity = 187/191 (97.91%), Postives = 189/191 (98.95%), Query Frame = 0 

Query: 1   MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPHADDPNGLERGNENRLA 60
           MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPP AD+PNGLERGNENRLA
Sbjct: 1   MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPPADNPNGLERGNENRLA 60

Query: 61  KLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNSRTNIYINPRV 120
           KLAIVTLAAGVL+LGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNSRTNIYINPRV
Sbjct: 61  KLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNSRTNIYINPRV 120

Query: 121 APPLVGGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTVAAFVRRF 180
           APPLVGGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTVAAFVRRF
Sbjct: 121 APPLVGGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTVAAFVRRF 180

Query: 181 LGGRGEDDDDY 192
           LGGR EDDDDY
Sbjct: 181 LGGREEDDDDY 191

[Close]
BLAST of Carg24211 vs. NCBI nr
Match: XP_008451528.1 (PREDICTED: uncharacterized protein LOC103492785 [Cucumis melo])

HSP 1 Score: 184.9 bits (468), Expect = 2.6e-43
Identity = 140/192 (72.92%), Postives = 154/192 (80.21%), Query Frame = 0 

Query: 1   MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPHADDPNGLERGNENRLA 60
           MSL SSQLSFLST  SFS +P    +  +L+S   +++ KLPP +DDP    +GNENR+A
Sbjct: 1   MSLPSSQLSFLSTAFSFSFSPPRAHNLRLLYSSSAVVSCKLPPASDDP----KGNENRVA 60

Query: 61  KLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNSRTNIYINPRV 120
           KLAIVTL AG+L+LGSVHDASAAKTGGRVGGQAFRSAAPR SSPRINNNSRTNIYINPRV
Sbjct: 61  KLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSPRINNNSRTNIYINPRV 120

Query: 121 APPLVGGY-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTVAAFVRR 180
           APPLVGGY XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            G+VAAFVR+
Sbjct: 121 APPLVGGYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLDVLFFFILLGSVAAFVRK 180

Query: 181 FLGGRGEDDDDY 192
            LG R  DDDDY
Sbjct: 181 ILGRREADDDDY 188

[Close]
BLAST of Carg24211 vs. NCBI nr
Match: XP_004148325.2 (PREDICTED: uncharacterized protein LOC101221328 [Cucumis sativus] >KGN61155.1 hypothetical protein Csa_2G060360 [Cucumis sativus])

HSP 1 Score: 174.1 bits (440), Expect = 4.6e-40
Identity = 146/195 (74.87%), Postives = 157/195 (80.51%), Query Frame = 0 

Query: 1   MSLASSQLSFLSTTLSFSSAPTPRRSNN--ILHSFHPIIASKLPPHADDPNGLERGNENR 60
           MSL SSQL+FLST  SFSS   P R++N  +LHS +P+I+ KLPP + DP    +GNENR
Sbjct: 1   MSLPSSQLTFLSTAFSFSSFSPPPRTHNLRLLHSSNPLISCKLPPPSHDP----KGNENR 60

Query: 61  LAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNSRTNIYINP 120
           +A LAIVTL AGVL+LGSVHDASAAKTGGRVGGQAFRSAAPR SSPRINNNSRTNIYINP
Sbjct: 61  VANLAIVTLMAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSPRINNNSRTNIYINP 120

Query: 121 RVAPPLVGGY--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTVAAF 180
           RVAPPL GGY  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     XXX  GTVAAF
Sbjct: 121 RVAPPL-GGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDVLFXXXLLGTVAAF 180

Query: 181 VRRFLGGRGEDDDDY 192
           VRR  G R     DY
Sbjct: 181 VRRIFGRREXXXXDY 190

[Close]
BLAST of Carg24211 vs. TAIR10
Match: AT5G57345.1 (unknown protein)

HSP 1 Score: 127.5 bits (319), Expect = 8.9e-30
Identity = 74/127 (58.27%), Postives = 89/127 (70.08%), Query Frame = 0 

Query: 2   SLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPHADDPNGLERGNENRLAK 61
           ++ASS+ SFLS   SF  +  P+ + N+     P        H DD     R NEN+LAK
Sbjct: 5   AIASSRQSFLSNNFSFQHSFKPKSNVNLT---RPNSICCKSSHHDDETDSSRKNENQLAK 64

Query: 62  LAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNSRTNIYINPRVA 121
           LAI TLA GVL+LGSV DA AAK+GGR+GGQAFRS+APR   PRINN SRTNIY+NP+VA
Sbjct: 65  LAIATLAVGVLALGSVGDAFAAKSGGRIGGQAFRSSAPR-PPPRINNRSRTNIYVNPQVA 124

Query: 122 PPLVGGY 129
           PPL+GGY
Sbjct: 125 PPLIGGY 127

[Close]
BLAST of Carg24211 vs. TrEMBL
Match: tr|A0A1S3BRQ8|A0A1S3BRQ8_CUCME (uncharacterized protein LOC103492785 OS=Cucumis melo OX=3656 GN=LOC103492785 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.7e-43
Identity = 140/192 (72.92%), Postives = 154/192 (80.21%), Query Frame = 0 

Query: 1   MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPHADDPNGLERGNENRLA 60
           MSL SSQLSFLST  SFS +P    +  +L+S   +++ KLPP +DDP    +GNENR+A
Sbjct: 1   MSLPSSQLSFLSTAFSFSFSPPRAHNLRLLYSSSAVVSCKLPPASDDP----KGNENRVA 60

Query: 61  KLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNSRTNIYINPRV 120
           KLAIVTL AG+L+LGSVHDASAAKTGGRVGGQAFRSAAPR SSPRINNNSRTNIYINPRV
Sbjct: 61  KLAIVTLMAGILTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSPRINNNSRTNIYINPRV 120

Query: 121 APPLVGGY-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTVAAFVRR 180
           APPLVGGY XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX            G+VAAFVR+
Sbjct: 121 APPLVGGYGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGLDVLFFFILLGSVAAFVRK 180

Query: 181 FLGGRGEDDDDY 192
            LG R  DDDDY
Sbjct: 181 ILGRREADDDDY 188

[Close]
BLAST of Carg24211 vs. TrEMBL
Match: tr|A0A0A0LGT3|A0A0A0LGT3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060360 PE=4 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.0e-40
Identity = 146/195 (74.87%), Postives = 157/195 (80.51%), Query Frame = 0 

Query: 1   MSLASSQLSFLSTTLSFSSAPTPRRSNN--ILHSFHPIIASKLPPHADDPNGLERGNENR 60
           MSL SSQL+FLST  SFSS   P R++N  +LHS +P+I+ KLPP + DP    +GNENR
Sbjct: 1   MSLPSSQLTFLSTAFSFSSFSPPPRTHNLRLLHSSNPLISCKLPPPSHDP----KGNENR 60

Query: 61  LAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNSRTNIYINP 120
           +A LAIVTL AGVL+LGSVHDASAAKTGGRVGGQAFRSAAPR SSPRINNNSRTNIYINP
Sbjct: 61  VANLAIVTLMAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPRPSSPRINNNSRTNIYINP 120

Query: 121 RVAPPLVGGY--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTVAAF 180
           RVAPPL GGY  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     XXX  GTVAAF
Sbjct: 121 RVAPPL-GGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLDVLFXXXLLGTVAAF 180

Query: 181 VRRFLGGRGEDDDDY 192
           VRR  G R     DY
Sbjct: 181 VRRIFGRREXXXXDY 190

[Close]
BLAST of Carg24211 vs. TrEMBL
Match: tr|A0A2P4LMH0|A0A2P4LMH0_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_57437 PE=4 SV=1)

HSP 1 Score: 144.8 bits (364), Expect = 2.0e-31
Identity = 139/193 (72.02%), Postives = 155/193 (80.31%), Query Frame = 0 

Query: 1   MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPHAD-DPNGLERGNENRL 60
           +++ASS  SFL+ T+  S+ P   + +  +      I+ + P H D   +   R NEN+L
Sbjct: 4   LTIASSHQSFLTNTI--SNPPNHYKPSTKILYPAKTISCRHPSHDDHQDSDSPRKNENQL 63

Query: 61  AKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNSRTNIYINPR 120
           AKLAIVTLAAGVL+LGSVHDASAAKTGGRVGGQAFRSAAPR   PR+NNNSRTNIYINP 
Sbjct: 64  AKLAIVTLAAGVLTLGSVHDASAAKTGGRVGGQAFRSAAPR-PPPRVNNNSRTNIYINPP 123

Query: 121 VAPPLVGGY-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTVAAFVR 180
           VAPPLVGGY XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG VAA VR
Sbjct: 124 VAPPLVGGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVAAVVR 183

Query: 181 RFLGGRGEDDDDY 192
           RF+G R EDDDDY
Sbjct: 184 RFVGSRFEDDDDY 193

[Close]
BLAST of Carg24211 vs. TrEMBL
Match: tr|M5XYU1|M5XYU1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa011652mg PE=4 SV=1)

HSP 1 Score: 139.8 bits (351), Expect = 6.3e-30
Identity = 132/199 (66.33%), Postives = 145/199 (72.86%), Query Frame = 0 

Query: 2   SLASSQLSFLSTTLSFSSAPTPRRSNNILHS-FHPIIASKLPPHADD-------PNGLER 61
           S+ASSQ SFL+  L   + PT +    IL S  +  I+ K    + D        +GL R
Sbjct: 4   SVASSQQSFLANAL---APPTHKPKTKILTSAANTTISCKRSYSSTDDHKGSSSDDGLLR 63

Query: 62  GNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFR-SAAPRSSSPRINNNSRT 121
            NEN+LAKLA+VTLAAGVL+LG VHDASAAKTGGRVGGQAFR SA PRSSSPRINNNSRT
Sbjct: 64  KNENKLAKLAMVTLAAGVLTLGPVHDASAAKTGGRVGGQAFRPSAPPRSSSPRINNNSRT 123

Query: 122 NIYINPRVAPPLVGGY-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 181
           NIYINP VAPPLVGGY XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          G
Sbjct: 124 NIYINPPVAPPLVGGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFQLLAFFAFLG 183

Query: 182 TVAAFVRRFLGGRGEDDDD 191
            VAA  RRF G R E++DD
Sbjct: 184 AVAAVARRFTGSRDEEEDD 199

[Close]
BLAST of Carg24211 vs. TrEMBL
Match: tr|A0A2P6QSX4|A0A2P6QSX4_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0400871 PE=4 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 8.3e-30
Identity = 127/199 (63.82%), Postives = 141/199 (70.85%), Query Frame = 0 

Query: 1   MSLASSQLSFLSTTLSFSSAPTPRRSNNILHSFHPIIASKLPPHADD-------PNGLER 60
           MS+ASSQ SFL+  L     P   +      +    I+ K    +DD        N + R
Sbjct: 1   MSVASSQQSFLANAL----IPQTHKPKTKFFTSPYTISCKRSSSSDDDHQKGLSSNEIPR 60

Query: 61  GNENRLAKLAIVTLAAGVLSLGSVHDASAAKTGGRVGGQAFRSAAPRSSSPRINNNSRTN 120
            NEN+ AKLA+VTLAAGVL+LGSV DASAAK+GGRVGGQAFRS+APR SSPRINNNSRTN
Sbjct: 61  KNENQFAKLAMVTLAAGVLTLGSVQDASAAKSGGRVGGQAFRSSAPRPSSPRINNNSRTN 120

Query: 121 IYINPRVAPPLVGGY-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGT 180
           IYINP VAPPLVGGY XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         G 
Sbjct: 121 IYINPPVAPPLVGGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLLAIAVFLGA 180

Query: 181 VAAFVRRFLGGRGEDDDDY 192
           +AA  RRF   R E+DDDY
Sbjct: 181 IAAVARRFNASRDEEDDDY 195

The following BLAST results are available for this feature:
BLAST of Carg24211 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022938204.12.3e-6899.48uncharacterized protein LOC111444353 [Cucurbita moschata][more]
XP_023536753.11.5e-6799.47uncharacterized protein LOC111798034 [Cucurbita pepo subsp. pepo][more]
XP_022969609.11.7e-6697.91uncharacterized protein LOC111468585 [Cucurbita maxima][more]
XP_008451528.12.6e-4372.92PREDICTED: uncharacterized protein LOC103492785 [Cucumis melo][more]
XP_004148325.24.6e-4074.87PREDICTED: uncharacterized protein LOC101221328 [Cucumis sativus] >KGN61155.1 hy... [more]
BLAST of Carg24211 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G57345.18.9e-3058.27unknown protein[more]
BLAST of Carg24211 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg24211 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BRQ8|A0A1S3BRQ8_CUCME1.7e-4372.92uncharacterized protein LOC103492785 OS=Cucumis melo OX=3656 GN=LOC103492785 PE=... [more]
tr|A0A0A0LGT3|A0A0A0LGT3_CUCSA3.0e-4074.87Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060360 PE=4 SV=1[more]
tr|A0A2P4LMH0|A0A2P4LMH0_QUESU2.0e-3172.02Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_57437 PE=4 SV=1[more]
tr|M5XYU1|M5XYU1_PRUPE6.3e-3066.33Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa011652mg PE=4 SV=1[more]
tr|A0A2P6QSX4|A0A2P6QSX4_ROSCH8.3e-3063.82Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0400871 PE=4... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR010903DUF1517
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg24211-RACarg24211-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010903Protein of unknown function DUF1517PFAMPF07466DUF1517coord: 82..186
e-value: 2.0E-6
score: 27.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 83..109
NoneNo IPR availablePANTHERPTHR37768FAMILY NOT NAMEDcoord: 2..191

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg24211Cla022807Watermelon (97103) v1carwmB0994
Carg24211Csa2G060360Cucumber (Chinese Long) v2carcuB1009
Carg24211MELO3C004003Melon (DHL92) v3.5.1carmeB0970
Carg24211ClCG11G011980Watermelon (Charleston Gray)carwcgB0969
Carg24211CSPI02G06200Wild cucumber (PI 183967)carcpiB1033
Carg24211Cucsa.089180Cucumber (Gy14) v1carcgyB1112
Carg24211CmaCh12G008930Cucurbita maxima (Rimu)carcmaB1378
Carg24211CmoCh12G009010Cucurbita moschata (Rifu)carcmoB1333
Carg24211Lsi11G007720Bottle gourd (USVL1VR-Ls)carlsiB908
Carg24211Cp4.1LG07g07400Cucurbita pepo (Zucchini)carcpeB1382
Carg24211CsGy2G006350Cucumber (Gy14) v2carcgybB0982
Carg24211MELO3C004003.2Melon (DHL92) v3.6.1carmedB0980
Carg24211CsaV3_2G008540Cucumber (Chinese Long) v3carcucB1039
Carg24211Cla97C11G217940Watermelon (97103) v2carwmbB1048
Carg24211Bhi06G001104Wax gourdcarwgoB1164
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg24211Silver-seed gourdcarcarB073
Carg24211Cucumber (Gy14) v2carcgybB0981
Carg24211Cucurbita maxima (Rimu)carcmaB1379
Carg24211Cucurbita moschata (Rifu)carcmoB1334
Carg24211Cucurbita pepo (Zucchini)carcpeB1381
Carg24211Wild cucumber (PI 183967)carcpiB1032
Carg24211Cucumber (Chinese Long) v2carcuB1008
Carg24211Cucumber (Chinese Long) v3carcucB1038
Carg24211Bottle gourd (USVL1VR-Ls)carlsiB909
Carg24211Melon (DHL92) v3.5.1carmeB0969
Carg24211Melon (DHL92) v3.6.1carmedB0979
Carg24211Watermelon (Charleston Gray)carwcgB0970
Carg24211Watermelon (97103) v1carwmB0995
Carg24211Watermelon (97103) v2carwmbB1049
Carg24211Wax gourdcarwgoB1165