Carg24205 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAATATTATCAAGCACCCTTCACTATTTCGGATAGTATTTATGGTTCTACCTTTTTCTTAGCAACTAGCTTTCATGGTTTTCATGTGATTATAGGTACTCTTTTCTTGATCATATGTGGTATTCGCCAATATCTTGGTCATCTGACCAAGGAGCATCACGTTGGCTTTGAAGCAGCTGCATGGTACTGGCATTTTGTAGACGTGGTTCGGTTATTCCTATTTGTCTCTATCTATTGGTGGGGAGGTATATGA ATGGAATATTATCAAGCACCCTTCACTATTTCGGATAGTACTCTTTTCTTGATCATATGTGGTATTCGCCAATATCTTGGTCATCTGACCAAGGAGCATCACGTTGGCTTTGAAGCAGCTGCATGGTACTGGCATTTTGTAGACGTGGTTCGGTTATTCCTATTTGTCTCTATCTATTGGTGGGGAGGTATATGA ATGGAATATTATCAAGCACCCTTCACTATTTCGGATAGTACTCTTTTCTTGATCATATGTGGTATTCGCCAATATCTTGGTCATCTGACCAAGGAGCATCACGTTGGCTTTGAAGCAGCTGCATGGTACTGGCATTTTGTAGACGTGGTTCGGTTATTCCTATTTGTCTCTATCTATTGGTGGGGAGGTATATGA MEYYQAPFTISDSTLFLIICGIRQYLGHLTKEHHVGFEAAAWYWHFVDVVRLFLFVSIYWWGGI
BLAST of Carg24205 vs. NCBI nr
Match: AHX81461.1 (cytochrome c oxidase subunit 3 (mitochondrion) [Licania sprucei] >AHX81480.1 cytochrome c oxidase subunit 3 (mitochondrion) [Hirtella physophora] >AHX81483.1 cytochrome c oxidase subunit 3 (mitochondrion) [Chrysobalanus icaco] >AHX81512.1 cytochrome c oxidase subunit 3 (mitochondrion) [Licania alba] >AHX81524.1 cytochrome c oxidase subunit 3 (mitochondrion) [Licania heteromorpha] >AHX81536.1 cytochrome c oxidase subunit 3 (mitochondrion) [Hirtella racemosa] >AHX81539.1 cytochrome c oxidase subunit 3 (mitochondrion) [Parinari campestris] >AHX81546.1 cytochrome c oxidase subunit 3 (mitochondrion) [Couepia guianensis]) HSP 1 Score: 129.8 bits (325), Expect = 3.3e-27 Identity = 64/84 (76.19%), Postives = 64/84 (76.19%), Query Frame = 0
BLAST of Carg24205 vs. NCBI nr
Match: YP_009045781.1 (cytochrome c oxidase subunit 3 (mitochondrion) [Batis maritima] >AIC83384.1 cytochrome c oxidase subunit 3 (mitochondrion) (mitochondrion) [Batis maritima]) HSP 1 Score: 129.8 bits (325), Expect = 3.3e-27 Identity = 64/84 (76.19%), Postives = 64/84 (76.19%), Query Frame = 0
BLAST of Carg24205 vs. NCBI nr
Match: AKZ24712.1 (cytochrome c oxidase subunit 3 (mitochondrion) [Androsace occidentalis]) HSP 1 Score: 129.8 bits (325), Expect = 3.3e-27 Identity = 64/84 (76.19%), Postives = 64/84 (76.19%), Query Frame = 0
BLAST of Carg24205 vs. NCBI nr
Match: AMC32862.1 (cytochrome c oxidase subunit 3 (mitochondrion) [Viola bicolor] >AMC32863.1 cytochrome c oxidase subunit 3 (mitochondrion) [Viola pedatifida]) HSP 1 Score: 129.8 bits (325), Expect = 3.3e-27 Identity = 64/84 (76.19%), Postives = 64/84 (76.19%), Query Frame = 0
BLAST of Carg24205 vs. NCBI nr
Match: XP_022973466.1 (uncharacterized protein LOC111472011 [Cucurbita maxima]) HSP 1 Score: 129.8 bits (325), Expect = 3.3e-27 Identity = 64/84 (76.19%), Postives = 64/84 (76.19%), Query Frame = 0
BLAST of Carg24205 vs. TAIR10
Match: AT2G07687.1 (Cytochrome c oxidase, subunit III) HSP 1 Score: 126.7 bits (317), Expect = 5.1e-30 Identity = 63/84 (75.00%), Postives = 63/84 (75.00%), Query Frame = 0
BLAST of Carg24205 vs. TAIR10
Match: ATMG00730.1 (cytochrome c oxidase subunit 3) HSP 1 Score: 126.7 bits (317), Expect = 5.1e-30 Identity = 63/84 (75.00%), Postives = 63/84 (75.00%), Query Frame = 0
BLAST of Carg24205 vs. Swiss-Prot
Match: sp|P92514|COX3_ARATH (Cytochrome c oxidase subunit 3 OS=Arabidopsis thaliana OX=3702 GN=COX3 PE=2 SV=2) HSP 1 Score: 126.7 bits (317), Expect = 9.2e-29 Identity = 63/84 (75.00%), Postives = 63/84 (75.00%), Query Frame = 0
BLAST of Carg24205 vs. Swiss-Prot
Match: sp|P14853|COX3_SOYBN (Cytochrome c oxidase subunit 3 OS=Glycine max OX=3847 GN=COX3 PE=2 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 9.2e-29 Identity = 63/84 (75.00%), Postives = 63/84 (75.00%), Query Frame = 0
BLAST of Carg24205 vs. Swiss-Prot
Match: sp|P08745|COX3_OENBE (Cytochrome c oxidase subunit 3 OS=Oenothera berteroana OX=3950 GN=COX3 PE=3 SV=2) HSP 1 Score: 123.6 bits (309), Expect = 7.8e-28 Identity = 62/84 (73.81%), Postives = 62/84 (73.81%), Query Frame = 0
BLAST of Carg24205 vs. Swiss-Prot
Match: sp|Q03227|COX3_VICFA (Cytochrome c oxidase subunit 3 OS=Vicia faba OX=3906 GN=COX3 PE=3 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 1.0e-27 Identity = 61/84 (72.62%), Postives = 62/84 (73.81%), Query Frame = 0
BLAST of Carg24205 vs. Swiss-Prot
Match: sp|P14852|COX3_ORYSI (Cytochrome c oxidase subunit 3 OS=Oryza sativa subsp. indica OX=39946 GN=COX3 PE=3 SV=2) HSP 1 Score: 122.1 bits (305), Expect = 2.3e-27 Identity = 60/84 (71.43%), Postives = 62/84 (73.81%), Query Frame = 0
BLAST of Carg24205 vs. TrEMBL
Match: tr|A0A0R0H600|A0A0R0H600_SOYBN (Cytochrome c oxidase subunit 3 OS=Glycine max OX=3847 GN=15308561 PE=3 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 2.2e-27 Identity = 64/84 (76.19%), Postives = 64/84 (76.19%), Query Frame = 0
BLAST of Carg24205 vs. TrEMBL
Match: tr|E9KZN7|E9KZN7_VIGRR (Cytochrome c oxidase subunit 3 OS=Vigna radiata var. radiata OX=3916 GN=cox3 PE=3 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 2.2e-27 Identity = 64/84 (76.19%), Postives = 64/84 (76.19%), Query Frame = 0
BLAST of Carg24205 vs. TrEMBL
Match: tr|E9P2B2|E9P2B2_RICCO (Cytochrome c oxidase subunit 3 OS=Ricinus communis OX=3988 GN=cox3 PE=3 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 2.2e-27 Identity = 64/84 (76.19%), Postives = 64/84 (76.19%), Query Frame = 0
BLAST of Carg24205 vs. TrEMBL
Match: tr|A0A023T2P2|A0A023T2P2_9ROSI (Cytochrome c oxidase subunit 3 OS=Hirtella racemosa OX=1125932 GN=cox3 PE=3 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 2.2e-27 Identity = 64/84 (76.19%), Postives = 64/84 (76.19%), Query Frame = 0
BLAST of Carg24205 vs. TrEMBL
Match: tr|A0A109RTV9|A0A109RTV9_9FABA (Cytochrome c oxidase subunit 3 OS=Lespedeza capitata OX=571920 PE=3 SV=1) HSP 1 Score: 129.8 bits (325), Expect = 2.2e-27 Identity = 64/84 (76.19%), Postives = 64/84 (76.19%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |