Carg24204 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24204
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	B3 domain-containing protein
Location	Cucurbita_argyrosperma_scaffold_225 : 218103 .. 223616 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAGTTTCTCCATATCCATCGATGTCAAAGTGGCGCAATGCATTCTTTCTAATCACAACGCCGGACATGCCAACTCGGATGCGCAAGCAGATCGAGGAGATGCAAGGATACAATCTCCAATTGGTGATTCATAAGAAATTAATAGAAACTGATATGAACGAGAAAGATGGCCGTTTGTTTCTTATAATCAAGAAAATCTTATTCCATTTCATCACCCCAGACGAGGAGAAGCTCTTGAATGATGCAAACGGATTCATGGAAGTCAAGATTCTTGATGAGGGTCAAAGGGTGAGCCCCATGTTCTTGACCAAAGGCAAGATTCAAGAACATGATGCATATTGTTTGACCACTCATTGGAATTCTTTTGTCGCCAAAAATTGCTTGAAAATTGGCCATCTTATCCAACTTTGGAGTTTCAGAAGAGTTCGACTCGTAGACATCGAAAACGAAATATTCACCTCTGATCTTTACTTCGCATTGAATACCATGGATGGTCGATGTTTTCTTTAGATGCGTTCTTGAGTAAATAATGGATAGGATAGGCAGCTTTCTTTAGAAGTTTTTCCATTCGTATATGTTTTCTTTTGATGCGATGCGTTCTTGCGTAGACTCCGCAGATTATTTTTAGAGTTTTTTTTTTTTTCCTATGTTCCAGTTCAAGAAATTATCCATTCTTAAATAAATGTCAGGATTAGTAGTTTAATAATTTTTACGTCTTGGATCTTGTTTATTGATTATATGTTTTCGATATTTTTAAGGGGCCTCGAGTAAACTTTTGATTACTCTGTCTCAATTATTTATATTTGTAGCGATTTAAGTCCAAGATCTAAGATCTGATGATCCTGACACTCCCTTATATCCCGTTCTAAGAGTGACGACTAGCAATGATGCTGATTATCTTGGGTAGCCCATTCTTAAAAATGGCTAGAACATTAATGGATGTCCACAGGATAATGATAATATTTAGAATGGTGTTCAACAAATAAAATTCAATATCAATGGCTATTTGAAATATTTAGTAATCTCTCGATTGATTTGAAACCAAGTAGAACAGAAGACGAGCAATGGCCCATGATGCAAACTTAACCAACTACTGAGCCTGCAATTTCATCCGAGCATATCTATCATATGAACCATAAAAGTTTATTCGTGATGCAAAAAGATATTTAGGGGATGAAACGATACAAATGAAAATTAAAAGGAATGAGTCGGGTATCATATTTTCGAGAAAAAGGAATGCTTCATCTTCCACTCTATATCACTTTTTTCTTTAAAACAATATATCAACATACTATGCTATCATAAGATACTTAACCTTTAAATAATATATTAACATCGGACCATTGAAGACAATGCCAACTTTAAGGTCACCATAAATGGGACAATAGACTTGACTCCACACCTCAAAACAATGTTAGACAAGTCTTTATATAAACATAGTAATACTAATTCTCGTACATGAATCAAATAAACGAGAACACTAATCAAAATGGCCTTTATACACACATAAAATTACTAATTCTCATACTTTAATCAAATAAACTAAAATACTAATCAAAATGGTTACAAACTGAAGGGAGGTTAAGAATGAATATTAATCAAAATAGTTATGTTGAGGCCATTGGGTGCTGAATCTAGATTTCAAATATGGGCATAAAATGTTACAAATAGTATCAAAGCGAAAACTCTTTCAAAAGGATGCAGTTCAAAGATGAACCAAGGTAAAAGTCAATAGTCATGTGATGCTCGTGCACAAGAAGAGTATATGTATAAACTGAGGCTATATCAAAATGATAGTGAAGTTAAGAAGGGAAAAAAAATTGATATGTATTGCCCATGCAAATAAGTTGCACATTAGTCCTATTCAGAAAGGGTAAAAAAATTTGATATGTATTGCCCATGCAAATAAGTTGCACATTCTTCCTAAAAATAATATCATGTTAAAGAGGATGCATTAGAGAGAGAAACATTAGGCAAGAGAAAAAGTTTGAGAAAGAGAGGAAATATAACTAACTCATGCCACTGTTAATAGGTATTGTCTTTTTTGGGCTTTTCTTTTCGGGATTTCCCTCAAAGCTTGCCCACCGCTAGCAGATATTGTCCTCTTCGGGTTTTCCCCTTCGGGATTTCCCTCAAGGCTTGCCCACCCCTAGTAGATATTGTCCTCTTTGGGTTTCCCTTTCGGGATTCCCCTCAAGACTTGCCCATCGCTAACAGATATTGTTCTCTTTGGGCTTTCCCCTTCGGGATTCCCCTCAAGACTTTAAAAGTCGTCTACTACTAGGGGAAGGTTTCCACACCTTATAAATGGTGTTTTGTTCTTCTCCCCAGCCAATGTGAAACATCACAATCCACCCTCCTTCGGGGTAAATGGTGTTTTGTTCTCCTCTCCAACCAATGTGAAACATCAGAATCCACCCTCCTTCGGGGCCAGCATCCTCACTGACACTTATTCCTTTCTCCAATCGAGGTGGGACCGCCACCAACACAATCCACCCTCCTTCGGGGTAAATGGTGTTTTGTTCTCCTCTCCAACCAATGTGAAACATCACAATCCACCCTCCTTCGGGGCCAGCATCCTCGCTGACGCTTATTCCTTTCTCCAATCGAGGTGGGACCGCCACCAAATCTACCCCCTTTGGGGCCCAACGTTCTTACATCACAATCCGCCTCGTGTCTACCCCCCTTCGGGGAACAACGAAAAGGCTGACACTTCGTCCAGTGTCTAACTCTGATACCATTTGTAACAACCTAGGCCCACTGCTAGCCGATGTCGTCCTCTTTGGGCTTCCCCTCAAGGCTTTAAAACGTGTCTACTAGTGGAAGGTTTCCACACCCTTGTAAAGGGTGTTTTGTTCTCCTTCCCCAACCAATGTGGGACATCACAGAAAATAAAATTTTAGGGAGAAAAAAATCATTTGTAGCAAACCGAGTTATTCCACTCTTATTAATTAGGGTCGTGATTTAAAACCAATAGTATCAGTTCTGGAATGGAAATTATAAACAAATCACTTACATGCCACTGCACTCCTCTATCAGGGTTAGATATACACACGATTTCATACTTCCTAATGGATCACCCTAGGGCACATGAATTCTCTTTGTAAAGAAGAAAAAAGATGGATCGTTGCACCTATGTATTGACTTTCAAGAATTGGACAAGATATCAATAAAAAATGAGGACTACTTTTACATATATTGACTTATTCGACCTGTTTCAAGGAGCGTCAATATTTCCAATACTGAATTTAGGAATGGTCCCACAACCGTTGAGAACAAGAGACAATGATACAAACATGAGTTTAGGCGGTGTCACATGAGTTGACAACTTATAATCTACGTACATGCTTGAGACTTCAACACTTACCTTATTACAAGCTCGAAGGCAATGACGTGTGGCAATGGTCTAGAGAGAAGGCCACGATGAGGGGACAAGAGTGTTGTGCAGCGATGGCAAGAGGTGAGAGTAGAGTGTTATGTGGCAACGACTAGAGGGCGAGAGTACTACACTAGAATAGGGGCGATAAAGGGCAAGACTCGAGACGAGAGTACTACGGGTTGCGGCTGCACTTTAGGGTTAGATTTCTAAATTTATTTTGAATATATATTACAAAAACAACAGGTTTGGGTCGGGTCAACTCGAAAACTTTTCCCCTCAACCCCCAACCCAAAACAAATAAAATCAGATAAAGAAACACCCAACCCAACTCTTATAATTCAGGTTAGCGATGCTAGATTTTCGAGTTAGATGTACAACCCTATTGAGAATGTGCCTATAGTTTTCATGGATTTGATGAACAAAGTGTTTAAGGGACATGTGGGCTAGTTAGAAAGGGATATATTGTGTCCTAAGCATCATTGATTATGATTCTCGCTATTTGAAAGTATAGCAGTCCAAGTCCACCACGAGTAGATATTGTTTTTTTTTTTTTTTTGAGGTTTCCCTTTTAATTTTTTCCTTCAAGGTTTTAAAACGTTGTCTATAGGGAGAGATTTCCACACCCTTTTAAAGAATGCTTCGTTTTCCTCTTCAACCGATGTGGGATTTCACAATCCACCCCCCTTCGGAGCCCAACGTCGTCACCGACACTCATTCCCTTCTCCAATCAATATTAGATCCCCCAATCCACCCCCTTTGAGTTCCAGTGTCCTTACTAGTACACCGCCTAGTGTCTGACTCTAATACCATTTGTAACAACCGAAGCCGATTGCTAACAGATAGCAGTGGGCTTAGGCTGTTACAAAAAGATCATGAGTAGAACTACTCAATTCATAATTTGTAGTTAGAAGTTGCGGTCCTTACTTTAAAAATTTGAAGACATTATTCGTAGGGTGAGAAGATTCCAATCATCATAGACCATAAGAGATTAAAGCACTTTTAAAGTCGAAAGTTCTAAACACGGGACAACAATAAGTGCCCGAAGCTAGTTACATATTATAAAGTTGAGATATTATATAATAGTAAGTTAAACGGTTGAATTTTAGTAATATCTCCTCAAGCGAAAATTTGAAAGTATTACCATAGAAATTGAGGGAATCGAAGTAAATAATTCTTAAAATGTATATATATTAGATGGTTTTTTCCTTTCTCTTCTCATAATCTTAACTTATGTCAGTTTCTCCAAATCGATCGATGTCAAATAAGCGTACTAAGTTTTTTATATACTCAACGCCCGACATACCAACTCGAATGCGAAAGAAGATCGAGGACATGCATGGATACAATCTCCAGATGGTGATTTATAAGAAATTGATAGATATTGATATGAACAAGAAAGATGGCCGTATGTTTTTTCAAATCAAGAATATATTTTTCGATTTCCTCACCCCAAAGGAGAAGGAGATCTTGAATGATGCAAACGGAGTCATCGAAGTCAAGATTGTCGATGAGGCTCAAAGGGTGAGTCCCATGCTCTTGACCAAAGGCAAGATTAAAGAACATGATGTTTATCTTTTTACCACTCATTGGAATTCTTTTGTCGACAAAAATTGCTTGAAATTTGGCAACCTCATCCAACTTTGGAGTTTCAGAAGAGTTCGACTCGTAGACATCGATAATGAAATATTCACCTCTGATCTTTATTTTGCGTTGAATACCATGGATGGCCGATGTATTCTTTAGAAGTGTTCTTGCATAAATAGTGGATAGGATCAGTAGTTTTCTGTAGATATTTTACAATTCAGGTAGATATTTTACAATTTGTAGATGTTTTCTTTAGATTGTTCATGTGTAGGTAGTTTTCTTTAGATATTTTACAATTGGTAGATGTTTTCTTTAGATTGTTCATGTGTAGGTAGTTTTCTTTAGATATTTTACAATTCGTAGATGTTTTCTTTAGATGTGTTCTTGTGTAGGCTTCGTCGATTTTTTGTAGAGTTTTTTCGTATGTCCCAGTTCAAGAAATTATCCATTCTTAAATAAATGTCAATATCAGTAGTTTAATAGTTTTCACGTTTTGGATCTTGTTTATTGATTATATGTTTTCAATATTTTTAGGGGGCATCGAGTAA

mRNA sequence

ATGTCAGTTTCTCCATATCCATCGATGTCAAAGTGGCGCAATGCATTCTTTCTAATCACAACGCCGGACATGCCAACTCGGATGCGCAAGCAGATCGAGGAGATGCAAGGATACAATCTCCAATTGGTGATTCATAAGAAATTAATAGAAACTGATATGAACGAGAAAGATGGCCGTTTGTTTCTTATAATCAAGAAAATCTTATTCCATTTCATCACCCCAGACGAGGAGAAGCTCTTGAATGATGCAAACGGATTCATGGAAGTCAAGATTCTTGATGAGGGTCAAAGGATCGAGGACATGCATGGATACAATCTCCAGATGGTGATTTATAAGAAATTGATAGATATTGATATGAACAAGAAAGATGGCCGTATGTTTTTTCAAATCAAGAATATATTTTTCGATTTCCTCACCCCAAAGGAGAAGGAGATCTTGAATGATGCAAACGGAGTCATCGAAGTCAAGATTGTCGATGAGGCTCAAAGGGTGAGTCCCATGCTCTTGACCAAAGGCAAGATTAAAGAACATGATGTTTATCTTTTTACCACTCATTGGAATTCTTTTGTCGACAAAAATTGCTTGAAATTTGGCAACCTCATCCAACTTTGGAGTTTCAGAAGAGTTCGACTCGTAGACATCGATAATGAAATATTCACCTCTGATCTTTATTTTGCGTTGAATACCATGGATGGCCGATGGGGCATCGAGTAA

Coding sequence (CDS)

ATGTCAGTTTCTCCATATCCATCGATGTCAAAGTGGCGCAATGCATTCTTTCTAATCACAACGCCGGACATGCCAACTCGGATGCGCAAGCAGATCGAGGAGATGCAAGGATACAATCTCCAATTGGTGATTCATAAGAAATTAATAGAAACTGATATGAACGAGAAAGATGGCCGTTTGTTTCTTATAATCAAGAAAATCTTATTCCATTTCATCACCCCAGACGAGGAGAAGCTCTTGAATGATGCAAACGGATTCATGGAAGTCAAGATTCTTGATGAGGGTCAAAGGATCGAGGACATGCATGGATACAATCTCCAGATGGTGATTTATAAGAAATTGATAGATATTGATATGAACAAGAAAGATGGCCGTATGTTTTTTCAAATCAAGAATATATTTTTCGATTTCCTCACCCCAAAGGAGAAGGAGATCTTGAATGATGCAAACGGAGTCATCGAAGTCAAGATTGTCGATGAGGCTCAAAGGGTGAGTCCCATGCTCTTGACCAAAGGCAAGATTAAAGAACATGATGTTTATCTTTTTACCACTCATTGGAATTCTTTTGTCGACAAAAATTGCTTGAAATTTGGCAACCTCATCCAACTTTGGAGTTTCAGAAGAGTTCGACTCGTAGACATCGATAATGAAATATTCACCTCTGATCTTTATTTTGCGTTGAATACCATGGATGGCCGATGGGGCATCGAGTAA

Protein sequence

MSVSPYPSMSKWRNAFFLITTPDMPTRMRKQIEEMQGYNLQLVIHKKLIETDMNEKDGRLFLIIKKILFHFITPDEEKLLNDANGFMEVKILDEGQRIEDMHGYNLQMVIYKKLIDIDMNKKDGRMFFQIKNIFFDFLTPKEKEILNDANGVIEVKIVDEAQRVSPMLLTKGKIKEHDVYLFTTHWNSFVDKNCLKFGNLIQLWSFRRVRLVDIDNEIFTSDLYFALNTMDGRWGIE

Homology

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BLAST of Carg24204 vs. NCBI nr
Match: XP_022938320.1 (B3 domain-containing protein At1g05930-like [Cucurbita moschata])

HSP 1 Score: 291.6 bits (745), Expect = 2.4e-75
Identity = 156/233 (66.95%), Postives = 159/233 (68.24%), Query Frame = 0


Query: 1   MSVSPYPSMSKWRNAFFLITTPDMPTRMRKQIEEMQGYNLQLVIHKKLIETDMNEKDGRL 60
           MSVSPYPSMSKWRNAFFLITTPDMPTRMRKQIEEMQGYNLQLVIHKKLIETDMNEKDGRL
Sbjct: 1   MSVSPYPSMSKWRNAFFLITTPDMPTRMRKQIEEMQGYNLQLVIHKKLIETDMNEKDGRL 60

Query: 61  FLIIKKILFHFITPDEEKLLNDANGFMEVKILDEGQRIEDMHGYNLQMVIYKKLIDIDMN 120
           FLIIKKILF FITPDEEKLLNDANG MEVKILDEG                         
Sbjct: 61  FLIIKKILFDFITPDEEKLLNDANGVMEVKILDEG------------------------- 120

Query: 121 KKDGRMFFQIKNIFFDFLTPKEKEILNDANGVIEVKIVDEAQRVSPMLLTKGKIKEHDVY 180
                                                    QRVSPM LTKGKI+EHD Y
Sbjct: 121 -----------------------------------------QRVSPMFLTKGKIQEHDAY 167

Query: 181 LFTTHWNSFVDKNCLKFGNLIQLWSFRRVRLVDIDNEIFTSDLYFALNTMDGR 234
             TTHWNSFV KNCLK G+LIQLWSFRRVRLVDI+NEIFTSDLYFALNTMDGR
Sbjct: 181 CLTTHWNSFVAKNCLKIGHLIQLWSFRRVRLVDIENEIFTSDLYFALNTMDGR 167

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BLAST of Carg24204 vs. NCBI nr
Match: XP_022938318.1 (B3 domain-containing protein At2g31420-like [Cucurbita moschata])

HSP 1 Score: 278.9 bits (712), Expect = 1.6e-71
Identity = 133/138 (96.38%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 96  QRIEDMHGYNLQMVIYKKLIDIDMNKKDGRMFFQIKNIFFDFLTPKEKEILNDANGVIEV 155
           ++IEDMHGYNLQMVIYKKLIDIDMNKKDGRMFFQIKNIFFDFLTPKEKEILNDANGVIEV
Sbjct: 3   KKIEDMHGYNLQMVIYKKLIDIDMNKKDGRMFFQIKNIFFDFLTPKEKEILNDANGVIEV 62

Query: 156 KIVDEAQRVSPMLLTKGKIKEHDVYLFTTHWNSFVDKNCLKFGNLIQLWSFRRVRLVDID 215
           KIVDEAQRVSPM LTKGKI+EHDVYLFTTHWNSFVDKNCLKFGNLIQLWSFRRVRL+DID
Sbjct: 63  KIVDEAQRVSPMFLTKGKIEEHDVYLFTTHWNSFVDKNCLKFGNLIQLWSFRRVRLIDID 122

Query: 216 NEIFTSDLYFALNTMDGR 234
           NEIFTSDLYFALNTMDGR
Sbjct: 123 NEIFTSDLYFALNTMDGR 140

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BLAST of Carg24204 vs. NCBI nr
Match: XP_022969589.1 (B3 domain-containing protein At2g31420-like [Cucurbita maxima])

HSP 1 Score: 278.1 bits (710), Expect = 2.8e-71
Identity = 132/138 (95.65%), Postives = 137/138 (99.28%), Query Frame = 0


Query: 96  QRIEDMHGYNLQMVIYKKLIDIDMNKKDGRMFFQIKNIFFDFLTPKEKEILNDANGVIEV 155
           ++IEDMHGYNLQMVIYKKLIDIDMNKKDGRMFFQIKN+FFDFLTPKEKE+LNDANGV+EV
Sbjct: 3   KQIEDMHGYNLQMVIYKKLIDIDMNKKDGRMFFQIKNVFFDFLTPKEKELLNDANGVMEV 62

Query: 156 KIVDEAQRVSPMLLTKGKIKEHDVYLFTTHWNSFVDKNCLKFGNLIQLWSFRRVRLVDID 215
           KIVDEAQRVSPM LTKGKIKEHDVYLFTTHWNSFVDKNCLKFGNLIQLWSFRRVRLVDID
Sbjct: 63  KIVDEAQRVSPMFLTKGKIKEHDVYLFTTHWNSFVDKNCLKFGNLIQLWSFRRVRLVDID 122

Query: 216 NEIFTSDLYFALNTMDGR 234
           NEIFTSDLYFALNTMDGR
Sbjct: 123 NEIFTSDLYFALNTMDGR 140

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BLAST of Carg24204 vs. NCBI nr
Match: XP_022938317.1 (B3 domain-containing protein At2g31420-like [Cucurbita moschata])

HSP 1 Score: 242.7 bits (618), Expect = 1.3e-60
Identity = 115/138 (83.33%), Postives = 130/138 (94.20%), Query Frame = 0


Query: 96  QRIEDMHGYNLQMVIYKKLIDIDMNKKDGRMFFQIKNIFFDFLTPKEKEILNDANGVIEV 155
           ++IEDMHGYNLQ+VI+K+LI+ DMN+K GR+FF+IK +FFDFLTP EKE+LNDANGV+EV
Sbjct: 7   KQIEDMHGYNLQLVIHKRLIEADMNEK-GRLFFRIKKMFFDFLTPNEKELLNDANGVMEV 66

Query: 156 KIVDEAQRVSPMLLTKGKIKEHDVYLFTTHWNSFVDKNCLKFGNLIQLWSFRRVRLVDID 215
           KIVDEAQRVSPM LTKGKIK+ DVY FTTHWNSFVDKNCLK G+LIQLWSFRRVRLVDID
Sbjct: 67  KIVDEAQRVSPMFLTKGKIKDQDVYFFTTHWNSFVDKNCLKLGHLIQLWSFRRVRLVDID 126

Query: 216 NEIFTSDLYFALNTMDGR 234
           NEIFTSDLYFALNT+DGR
Sbjct: 127 NEIFTSDLYFALNTVDGR 143

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BLAST of Carg24204 vs. NCBI nr
Match: XP_022144152.1 (B3 domain-containing protein At2g31420-like [Momordica charantia])

HSP 1 Score: 95.5 bits (236), Expect = 2.6e-16
Identity = 57/147 (38.78%), Postives = 83/147 (56.46%), Query Frame = 0


Query: 97  RIEDMHGYNLQMVIYKKLIDIDMNKKDGRMFFQIKNIFFDFLTPKEKEIL-------NDA 156
           RI ++ GY++Q+VI K+L D D+N+  GR+   IK +  DF T +EK++L       N+ 
Sbjct: 59  RIAELGGYDIQIVIQKRLQDTDLNRNHGRLSIPIKKLLNDFTTEEEKQLLDQQDEHQNNK 118

Query: 157 NGVIEVKIVDEAQRVSPMLLTKGKIKEHDVYLFTTHWNSFVDKNCLKFGNLIQLWSFRRV 216
           NGV  + I+D   R S + L K KI   ++Y   + WNS   KN L+ G+ IQLWSFR+ 
Sbjct: 119 NGVXAL-ILDPCLRESTIHLKKWKIGSREIYCLVSQWNSLAQKNSLESGDFIQLWSFRK- 178

Query: 217 RLVDIDNEIFTSDLYFALNTMDGRWGI 237
                ++   T  L FAL  +D   GI
Sbjct: 179 -----NSGTPTPHLCFALVKLDISEGI 198

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BLAST of Carg24204 vs. TAIR10
Match: AT2G27410.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 50.1 bits (118), Expect = 2.2e-06
Identity = 35/115 (30.43%), Postives = 57/115 (49.57%), Query Frame = 0


Query: 102 HGYNLQMVIYKKLIDIDMNKKDGRMFFQIKNIFF-DFLTPKEKEILND------ANGVIE 161
           +GYN +++  ++L   D+ K + R+    K +   DFLT  E  I+++       NGV  
Sbjct: 82  NGYNPKLISTRQLYKTDLKKTEARLSVPFKQVKTPDFLTEDETRIIHENAMKIRDNGV-P 141

Query: 162 VKIVDEAQRVSPMLLTKGKIKEHDVYLFTTHWNSFVD--KNCLKFGNLIQLWSFR 208
           V  VD       + L K K+K + +Y+F   W + +D  K   K  ++  LWSFR
Sbjct: 142 VNFVDPELNKHVLELRKWKMKGNWIYVFVKGWKNVLDACKTLFKEDDVYPLWSFR 195

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BLAST of Carg24204 vs. TAIR10
Match: AT5G24050.1 (Domain of unknown function (DUF313) )

HSP 1 Score: 43.1 bits (100), Expect = 2.7e-04
Identity = 38/132 (28.79%), Postives = 60/132 (45.45%), Query Frame = 0


Query: 107 QMVIYKKLIDIDMNKKDGRMFFQIKNIF-FDFLTPKEKEILND---ANGVIEVK--IVDE 166
           +++  K L   D+N    R+     N+   DFLT  E  I+N+    N  I V   +VD+
Sbjct: 217 KLIFEKTLFVTDVNPTKNRLSMPFNNLLRNDFLTSVESIIINEDINNNNKIGVGAILVDQ 276

Query: 167 AQRVSPMLLTKGKIKEHD-----VYLFTTHWNSFVDKNCLKFGNLIQLWSFRRVRLVDID 226
             +   ++L + ++K+        Y     WN  V+ N LK G+ I LWSFR   ++   
Sbjct: 277 RCKKWGVMLKRWEMKKESGKGSWSYNLICGWNDIVEANRLKEGDNITLWSFRCCGILCFA 336

Query: 227 NEIFTSDLYFAL 228
            E  +S L   L
Sbjct: 337 MEQSSSSLALCL 348

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BLAST of Carg24204 vs. Swiss-Prot
Match: sp|Q9XIP5|Y2741_ARATH (Putative B3 domain-containing protein At2g27410 OS=Arabidopsis thaliana OX=3702 GN=At2g27410 PE=3 SV=2)

HSP 1 Score: 50.1 bits (118), Expect = 4.0e-05
Identity = 35/115 (30.43%), Postives = 57/115 (49.57%), Query Frame = 0


Query: 102 HGYNLQMVIYKKLIDIDMNKKDGRMFFQIKNIFF-DFLTPKEKEILND------ANGVIE 161
           +GYN +++  ++L   D+ K + R+    K +   DFLT  E  I+++       NGV  
Sbjct: 82  NGYNPKLISTRQLYKTDLKKTEARLSVPFKQVKTPDFLTEDETRIIHENAMKIRDNGV-P 141

Query: 162 VKIVDEAQRVSPMLLTKGKIKEHDVYLFTTHWNSFVD--KNCLKFGNLIQLWSFR 208
           V  VD       + L K K+K + +Y+F   W + +D  K   K  ++  LWSFR
Sbjct: 142 VNFVDPELNKHVLELRKWKMKGNWIYVFVKGWKNVLDACKTLFKEDDVYPLWSFR 195

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BLAST of Carg24204 vs. TrEMBL
Match: tr|A0A1S3BCJ5|A0A1S3BCJ5_CUCME (B3 domain-containing protein At3g25182-like OS=Cucumis melo OX=3656 GN=LOC103488545 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 9.3e-15
Identity = 55/151 (36.42%), Postives = 85/151 (56.29%), Query Frame = 0


Query: 97  RIEDMHGYNLQMVIYKKLIDIDMNKKDGRMFFQIKNIFFDFLTPKEKEI--------LND 156
           RI+++ G+++Q V  K+L D DMNK  GR+    K +  DF + +EK++        L +
Sbjct: 100 RIDELDGFDIQYVTQKRLQDTDMNKNHGRLLIPFKKLRNDFASEEEKQLLKQHDQEDLKN 159

Query: 157 ANGVIEVKIVDEAQRVSPMLLTKGKIKEHDVYLFTTHWNSFVDKNCLKFGNLIQLWSFR- 216
            NG + V I+D   R   + L   K+ +HD Y   + WNSFV +N L+ G+ IQLWSFR 
Sbjct: 160 KNG-MTVLIIDPQLRNRHIELKMWKVGQHDSYCLMSKWNSFVQENSLESGDYIQLWSFRS 219

Query: 217 -RVRLVDIDNEI-FTSDLYFALNTMDGRWGI 237
             + +V   +++   S+L FAL  +D   GI
Sbjct: 220 NNIFIVGHQSQVPVNSNLCFALVKLDISEGI 249

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BLAST of Carg24204 vs. TrEMBL
Match: tr|A0A0A0KSY8|A0A0A0KSY8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G570420 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 6.0e-14
Identity = 52/135 (38.52%), Postives = 72/135 (53.33%), Query Frame = 0


Query: 97  RIEDMHGYNLQMVIYKKLIDIDMNKKDGRMFFQIKNIFFDFLTPKEKEILNDANGV---- 156
           RI +M GY +++VI K+L D D+NK  GR     K + FDF T +E ++L++        
Sbjct: 134 RILEMGGYEIRLVIQKELTDTDLNKNHGRFSMNTKLLSFDFATEEESKLLSEQENKNKKG 193

Query: 157 IEVKIVDEAQRVSPMLLTKGKIKEHDVYLFTTHWNSFVDKNCLKFGNLIQLWSFRRVRLV 216
           I V I+D+A     + L K KI   +VY   T WN  V+K   K G  IQ+WSFR+    
Sbjct: 194 INVMILDDALEERILCLKKWKIGSGEVYCLMTQWNLMVEKRGFKSGEEIQVWSFRK---- 253

Query: 217 DIDNEIFTSDLYFAL 228
             D+E     L FAL
Sbjct: 254 --DDEYEAHRLCFAL 262

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BLAST of Carg24204 vs. TrEMBL
Match: tr|A0A1S4E600|A0A1S4E600_CUCME (putative B3 domain-containing protein At3g24850 OS=Cucumis melo OX=3656 GN=LOC103504562 PE=4 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 3.9e-13
Identity = 49/135 (36.30%), Postives = 72/135 (53.33%), Query Frame = 0


Query: 97  RIEDMHGYNLQMVIYKKLIDIDMNKKDGRMFFQIKNIFFDFLTPKEKEILNDANGV---- 156
           RI +M GY +++VI K+L D D+NK  GR+    K + FDF T +E ++L++        
Sbjct: 134 RILEMGGYEIRLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEETKLLSEQENKNKRG 193

Query: 157 IEVKIVDEAQRVSPMLLTKGKIKEHDVYLFTTHWNSFVDKNCLKFGNLIQLWSFRRVRLV 216
           I V ++D+      + L K KI   +VY   T WN  V++   K G  IQ+WSFR+    
Sbjct: 194 INVMMLDDVLEERMLCLKKWKIGSGEVYCLMTRWNLMVEERGFKGGEEIQVWSFRK---- 253

Query: 217 DIDNEIFTSDLYFAL 228
             D+E     L FAL
Sbjct: 254 --DDEYEAHRLCFAL 262

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BLAST of Carg24204 vs. TrEMBL
Match: tr|A0A0A0KP87|A0A0A0KP87_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G544060 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.1e-12
Identity = 45/116 (38.79%), Postives = 64/116 (55.17%), Query Frame = 0


Query: 97  RIEDMHGYNLQMVIYKKLIDIDMNKKDGRMFFQIKNIFFDFLTPKEKEILNDANGV---- 156
           RI +M GY + +VI K+L D D+NK  GR+    K + FDF T +E ++L++        
Sbjct: 131 RILEMGGYEINLVIQKQLTDTDLNKNHGRLSMNTKQLSFDFATEEESKLLSEQENKNKMG 190

Query: 157 IEVKIVDEAQRVSPMLLTKGKIKEHDVYLFTTHWNSFVDKNCLKFGNLIQLWSFRR 209
           I V I+D+      + L K KI    VY   T WN  V++  LK G  IQ+WSFR+
Sbjct: 191 INVMILDDVLEERMLCLKKWKIGSGYVYCLMTKWNLMVEERGLKSGEEIQVWSFRK 246

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BLAST of Carg24204 vs. TrEMBL
Match: tr|A0A1S3CSS4|A0A1S3CSS4_CUCME (putative B3 domain-containing protein At3g24850 OS=Cucumis melo OX=3656 GN=LOC103504467 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.5e-12
Identity = 45/119 (37.82%), Postives = 69/119 (57.98%), Query Frame = 0


Query: 97  RIEDMHGYNLQMVIYKKLIDIDMNKKDGRMFFQIKNIFFDFLTPKEKEILN-----DANG 156
           RIE+M GY + +VI K+L D D+NK +GR+    K + FDF T +E+ +L+     +  G
Sbjct: 112 RIEEMGGYEINLVIQKQLTDTDLNKNEGRLSMPKKKLAFDFTTEEERNLLSQQENKNKKG 171

Query: 157 VIEVKIVDEAQRVSPMLLTKGKI--KEHDVYLFTTHWNSFVDKNCLKFGNLIQLWSFRR 209
           +  + + +  + +  + L K KI     DVY   T WN+FV++  LK G  IQLW FR+
Sbjct: 172 INVMIMNNMVEDIRSICLKKWKIGSGNGDVYCLMTQWNAFVEETGLKSGQHIQLWCFRK 230

The following BLAST results are available for this feature:

BLAST of Carg24204 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022938320.1	2.4e-75	66.95	B3 domain-containing protein At1g05930-like [Cucurbita moschata]	[more]
XP_022938318.1	1.6e-71	96.38	B3 domain-containing protein At2g31420-like [Cucurbita moschata]	[more]
XP_022969589.1	2.8e-71	95.65	B3 domain-containing protein At2g31420-like [Cucurbita maxima]	[more]
XP_022938317.1	1.3e-60	83.33	B3 domain-containing protein At2g31420-like [Cucurbita moschata]	[more]
XP_022144152.1	2.6e-16	38.78	B3 domain-containing protein At2g31420-like [Momordica charantia]	[more]

BLAST of Carg24204 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G27410.1	2.2e-06	30.43	Domain of unknown function (DUF313)	[more]
AT5G24050.1	2.7e-04	28.79	Domain of unknown function (DUF313)	[more]

BLAST of Carg24204 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9XIP5\|Y2741_ARATH	4.0e-05	30.43	Putative B3 domain-containing protein At2g27410 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Carg24204 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BCJ5\|A0A1S3BCJ5_CUCME	9.3e-15	36.42	B3 domain-containing protein At3g25182-like OS=Cucumis melo OX=3656 GN=LOC103488...	[more]
tr\|A0A0A0KSY8\|A0A0A0KSY8_CUCSA	6.0e-14	38.52	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G570420 PE=4 SV=1	[more]
tr\|A0A1S4E600\|A0A1S4E600_CUCME	3.9e-13	36.30	putative B3 domain-containing protein At3g24850 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A0A0KP87\|A0A0A0KP87_CUCSA	1.1e-12	38.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G544060 PE=4 SV=1	[more]
tr\|A0A1S3CSS4\|A0A1S3CSS4_CUCME	1.5e-12	37.82	putative B3 domain-containing protein At3g24850 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR015300	DNA-bd_pseudobarrel_sf
IPR005508	DUF313

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24204-RA	Carg24204-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005508	Protein of unknown function DUF313	PFAM	PF03754	DUF313	coord: 24..82 e-value: 7.3E-6 score: 26.1 coord: 97..192 e-value: 1.3E-7 score: 31.7
IPR015300	DNA-binding pseudobarrel domain superfamily	GENE3D	G3DSA:2.40.330.10		coord: 100..217 e-value: 5.9E-7 score: 31.0
IPR015300	DNA-binding pseudobarrel domain superfamily	SUPERFAMILY	SSF101936	DNA-binding pseudobarrel domain	coord: 146..207
None	No IPR available	PANTHER	PTHR31541	FAMILY NOT NAMED	coord: 96..230 coord: 18..93

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg24204	Cucurbita moschata (Rifu)	carcmoB1333
Carg24204	Cucurbita moschata (Rifu)	carcmoB1334
Carg24204	Cucurbita pepo (Zucchini)	carcpeB1381
Carg24204	Cucurbita pepo (Zucchini)	carcpeB1382
Carg24204	Wild cucumber (PI 183967)	carcpiB1032
Carg24204	Wild cucumber (PI 183967)	carcpiB1033
Carg24204	Cucumber (Chinese Long) v2	carcuB1008
Carg24204	Cucumber (Chinese Long) v2	carcuB1009
Carg24204	Cucumber (Chinese Long) v3	carcucB1038
Carg24204	Cucumber (Chinese Long) v3	carcucB1039
Carg24204	Bottle gourd (USVL1VR-Ls)	carlsiB908
Carg24204	Bottle gourd (USVL1VR-Ls)	carlsiB909
Carg24204	Melon (DHL92) v3.5.1	carmeB0969
Carg24204	Melon (DHL92) v3.5.1	carmeB0970
Carg24204	Melon (DHL92) v3.6.1	carmedB0979
Carg24204	Melon (DHL92) v3.6.1	carmedB0980
Carg24204	Watermelon (Charleston Gray)	carwcgB0969
Carg24204	Watermelon (Charleston Gray)	carwcgB0970
Carg24204	Watermelon (97103) v1	carwmB0994
Carg24204	Watermelon (97103) v1	carwmB0995
Carg24204	Watermelon (97103) v2	carwmbB1048
Carg24204	Watermelon (97103) v2	carwmbB1049
Carg24204	Wax gourd	carwgoB1164
Carg24204	Wax gourd	carwgoB1165
Carg24204	Silver-seed gourd	carcarB547
Carg24204	Cucumber (Gy14) v2	carcgybB0981
Carg24204	Cucumber (Gy14) v2	carcgybB0982
Carg24204	Cucumber (Gy14) v1	carcgyB1112
Carg24204	Cucurbita maxima (Rimu)	carcmaB1378
Carg24204	Cucurbita maxima (Rimu)	carcmaB1379