Carg24110 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24110
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ethylene-responsive transcription factor 114
Location	Cucurbita_argyrosperma_scaffold_177 : 258626 .. 260247 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGCTTTCTCAAGGTGGCGAACCACGGCGGCGGAAACGGCGGCGGAGATGACCCGGAGGCTATGTTTTCGTCTGAGGGGGAGCTAATGGCAATGGTGTCGGCTTTGACTCATGTCATTTCTGGTGGCGCTGTTCGTGCTTCTGGGGTTGGTTGTTCGTCTCGTGAGGATGCTCCCGTGACAGTGGCGGTGCCGACGATGACGGCGACCGGGTGTTCTAGGAAAAGAGAGAGGGAAGAAGAAGGTGGGATTGTGGAGTTTAGAGCAATTCAGAGTTATTCCACACCCTCTCCCGCAATTTGTGAGTTTCTAATTCTCGTCCTCATTTGTGGGTGGTGTCGAGACATTTTTAGATCTAACCCAATTTTTAAAATTATTAATTTTTTTATTAAATAATGAACTGGGTCCGGTTAGATAGGATTGACACGTGGTTCGATTTTCAACTAAAATAAATCTTATTAAACAATGAAATGGGTTCAGTTGGTCGGGTTGAGACATCTTTGAGACTCGACCCAATCGTTCACGTTTTATAATTTTTGTTAACAAAATTAGGTTGGGTCGGGTGAAAATGTCCTTCGACCCAACCTAATTATTGAAATGGATTATAAATTTTTTGAGTTGGGTTGGTTCGGATCATGCTTTACGTTTTAAAATAATTTTTTAATAAAAATAAAATTATATATTAAATTATTTTTAAATAACTCGATATTTTGAAAAATTACTTTCATTACAAAAATTATTTAAAATTTTTTTTGAAGAATAAATAATCAAATAAAATTTAAAAACTTAATTTTAATATATATTTTTGTAAATACCTTCTAAATAATTAAAAAATATTTTAAAGAATGTTTGAAAATAAATAATTGAAACAAATTGAATAAATAAATAATTATGAAATTAAAAAATAAATCTTTATAAAATTTTAAGGAAAAAAATTAGAATTAATTGAATTTGTAATTATTGTGGGCGTAGTAAAAGAGGAGGGAGGTTCAAGTTCAAGCAACCCCATCCCCGCCGCCACAGCTACGGCGGCGACAACGACGGCGGAATTTCCCGGCAAAGAGATAACAAGAACAAGATACAGAGGAGTAAGACAGAGGCCATGGGGAAAATGGGCTGCCGAAATTCGTGACCCTCAGAAGGCTGCCCGAGTCTGGCTCGGCACTTTCGACACCGCCGAGGCCGCCGCCCGAGCCTACGACAGCGCCGCCTTGCGCTTCCGTGGTAGCAAAGCTAAGCTCAATTTCCCTGAATTCGTCACTACCCTTCCACCGTCTTCGCCGCCGACCCCAAATTTAGTACCGTCTCCGGTGGTGCGGCCGCCGGTTTTCCAATTTGATTCAGACTATTTGCAGTATTCTCATTTGATTCAGAATTCCGGCGAGAATTCCGTCCAGCCGGCGCTGACGTTTGACAGGGTGCTCAGTAATTCGCCATTTGTGAATCCAAATTCTTTGATTTATTCTTCGGGTACTTCTTCTGGTGCTTCGAATTTTGATTTGCCGTTTTCTCAGCAGCAGATTGCATATTTCCGGCCGCCGGAAAATCAGAGCCACCGCGGCGGGGGTTCTTCAATGCCGCCGCCAACGGAATTTGGCTATCGTCCTCCCGCTACCGGTTGA

mRNA sequence

ATGTGCTTTCTCAAGGTGGCGAACCACGGCGGCGGAAACGGCGGCGGAGATGACCCGGAGGCTATGTTTTCGTCTGAGGGGGAGCTAATGGCAATGGTGTCGGCTTTGACTCATGTCATTTCTGGTGGCGCTGTTCGTGCTTCTGGGGTTGGTTGTTCGTCTCGTGAGGATGCTCCCGTGACAGTGGCGGTGCCGACGATGACGGCGACCGGGTGTTCTAGGAAAAGAGAGAGGGAAGAAGAAGGTGGGATTGTGGAGTTTAGAGCAATTCAGAGTTATTCCACACCCTCTCCCGCAATTTTAAAAGAGGAGGGAGGTTCAAGTTCAAGCAACCCCATCCCCGCCGCCACAGCTACGGCGGCGACAACGACGGCGGAATTTCCCGGCAAAGAGATAACAAGAACAAGATACAGAGGAGTAAGACAGAGGCCATGGGGAAAATGGGCTGCCGAAATTCGTGACCCTCAGAAGGCTGCCCGAGTCTGGCTCGGCACTTTCGACACCGCCGAGGCCGCCGCCCGAGCCTACGACAGCGCCGCCTTGCGCTTCCGTGGTAGCAAAGCTAAGCTCAATTTCCCTGAATTCGTCACTACCCTTCCACCGTCTTCGCCGCCGACCCCAAATTTAGTACCGTCTCCGGTGGTGCGGCCGCCGGTTTTCCAATTTGATTCAGACTATTTGCAGTATTCTCATTTGATTCAGAATTCCGGCGAGAATTCCGTCCAGCCGGCGCTGACGTTTGACAGGGTGCTCAGTAATTCGCCATTTGTGAATCCAAATTCTTTGATTTATTCTTCGGGTACTTCTTCTGGTGCTTCGAATTTTGATTTGCCGTTTTCTCAGCAGCAGATTGCATATTTCCGGCCGCCGGAAAATCAGAGCCACCGCGGCGGGGGTTCTTCAATGCCGCCGCCAACGGAATTTGGCTATCGTCCTCCCGCTACCGGTTGA

Coding sequence (CDS)

ATGTGCTTTCTCAAGGTGGCGAACCACGGCGGCGGAAACGGCGGCGGAGATGACCCGGAGGCTATGTTTTCGTCTGAGGGGGAGCTAATGGCAATGGTGTCGGCTTTGACTCATGTCATTTCTGGTGGCGCTGTTCGTGCTTCTGGGGTTGGTTGTTCGTCTCGTGAGGATGCTCCCGTGACAGTGGCGGTGCCGACGATGACGGCGACCGGGTGTTCTAGGAAAAGAGAGAGGGAAGAAGAAGGTGGGATTGTGGAGTTTAGAGCAATTCAGAGTTATTCCACACCCTCTCCCGCAATTTTAAAAGAGGAGGGAGGTTCAAGTTCAAGCAACCCCATCCCCGCCGCCACAGCTACGGCGGCGACAACGACGGCGGAATTTCCCGGCAAAGAGATAACAAGAACAAGATACAGAGGAGTAAGACAGAGGCCATGGGGAAAATGGGCTGCCGAAATTCGTGACCCTCAGAAGGCTGCCCGAGTCTGGCTCGGCACTTTCGACACCGCCGAGGCCGCCGCCCGAGCCTACGACAGCGCCGCCTTGCGCTTCCGTGGTAGCAAAGCTAAGCTCAATTTCCCTGAATTCGTCACTACCCTTCCACCGTCTTCGCCGCCGACCCCAAATTTAGTACCGTCTCCGGTGGTGCGGCCGCCGGTTTTCCAATTTGATTCAGACTATTTGCAGTATTCTCATTTGATTCAGAATTCCGGCGAGAATTCCGTCCAGCCGGCGCTGACGTTTGACAGGGTGCTCAGTAATTCGCCATTTGTGAATCCAAATTCTTTGATTTATTCTTCGGGTACTTCTTCTGGTGCTTCGAATTTTGATTTGCCGTTTTCTCAGCAGCAGATTGCATATTTCCGGCCGCCGGAAAATCAGAGCCACCGCGGCGGGGGTTCTTCAATGCCGCCGCCAACGGAATTTGGCTATCGTCCTCCCGCTACCGGTTGA

Protein sequence

MCFLKVANHGGGNGGGDDPEAMFSSEGELMAMVSALTHVISGGAVRASGVGCSSREDAPVTVAVPTMTATGCSRKREREEEGGIVEFRAIQSYSTPSPAILKEEGGSSSSNPIPAATATAATTTAEFPGKEITRTRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAYDSAALRFRGSKAKLNFPEFVTTLPPSSPPTPNLVPSPVVRPPVFQFDSDYLQYSHLIQNSGENSVQPALTFDRVLSNSPFVNPNSLIYSSGTSSGASNFDLPFSQQQIAYFRPPENQSHRGGGSSMPPPTEFGYRPPATG

Homology

[Close]

BLAST of Carg24110 vs. NCBI nr
Match: XP_022925393.1 (ethylene-responsive transcription factor ERF110-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 526.9 bits (1356), Expect = 4.6e-146
Identity = 282/316 (89.24%), Postives = 282/316 (89.24%), Query Frame = 0


Query: 1   MCFLKVANHGGGNXXXDDPEAMFSSEGELMAMVSALTHVISGGAVRASGVGCSSREDAPV 60
           MCFLKVANHGGGN   DDPEAMFSSEGELMAMVSALTHVISGGAVRASGV CSSREDAPV
Sbjct: 1   MCFLKVANHGGGNGGRDDPEAMFSSEGELMAMVSALTHVISGGAVRASGVDCSSREDAPV 60

Query: 61  TVAVPTMTATGCSRKREREEEGGIVEFRAIQSYSTPSPAILKEEGXXXXXXXXXXXXXXX 120
           TVAVPTMTATGCSRKREREEEGGIVEFRAIQSYSTPSPAILKEEG   XX          
Sbjct: 61  TVAVPTMTATGCSRKREREEEGGIVEFRAIQSYSTPSPAILKEEGGSSXXNPIPAATAMA 120

Query: 121 XXXXAEFPGKEITRTRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAYDSAA 180
               AEFPGKEITRTRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAYDSAA
Sbjct: 121 ATTTAEFPGKEITRTRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAYDSAA 180

Query: 181 LRFRGSKAKLNFPEFVTTLPPSSPPTPNLVPSPVVRPPVFQFDSDYLQYSHLIQNSGENS 240
           LRFRGSKAKLNFPEFVTTLPPSSPPTPNLV SPVVRPPVF FDSDYLQYSHLIQNSGENS
Sbjct: 181 LRFRGSKAKLNFPEFVTTLPPSSPPTPNLVLSPVVRPPVFPFDSDYLQYSHLIQNSGENS 240

Query: 241 VQPALTFDRVLSNSPFVNPNSLIYSSGTSSGASNFDLPFSQQQIAYFRPPENQSHRGXXX 300
           VQPALTFDRVLSNSPFVNPNSLI SSGTSSGASNFDLPFSQQQIAYFR         XXX
Sbjct: 241 VQPALTFDRVLSNSPFVNPNSLISSSGTSSGASNFDLPFSQQQIAYFRXXXXXXXXXXXX 300

Query: 301 XXXXPTEFGYRPPATG 317
           XXXX TEFGYRPPATG
Sbjct: 301 XXXXXTEFGYRPPATG 316

[Close]

BLAST of Carg24110 vs. NCBI nr
Match: XP_022925392.1 (ethylene-responsive transcription factor ERF110-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 519.6 bits (1337), Expect = 7.3e-144
Identity = 286/317 (90.22%), Postives = 286/317 (90.22%), Query Frame = 0


Query: 1   MCFLKVANHGGGNXXXDDPEAMFSSEGELMAMVSALTHVISGGAVRASGVGCSSREDAPV 60
           MCFLKVANHGGGN   DDPEAMFSSEGELMAMVSALTHVISGGAVRASGV CSSREDAPV
Sbjct: 1   MCFLKVANHGGGNGGRDDPEAMFSSEGELMAMVSALTHVISGGAVRASGVDCSSREDAPV 60

Query: 61  TVAVPTMTATGCSRKREREEEGGIVEFRAIQSYSTPSPAIL-KEEGXXXXXXXXXXXXXX 120
           TVAVPTMTATGCSRKREREEEGGIVEFRAIQSYSTPSPAIL KEE XXXXXXX       
Sbjct: 61  TVAVPTMTATGCSRKREREEEGGIVEFRAIQSYSTPSPAILVKEEXXXXXXXXIPAATAM 120

Query: 121 XXXXXAEFPGKEITRTRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAYDSA 180
                AEFPGKEITRTRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAYDSA
Sbjct: 121 AATTTAEFPGKEITRTRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAYDSA 180

Query: 181 ALRFRGSKAKLNFPEFVTTLPPSSPPTPNLVPSPVVRPPVFQFDSDYLQYSHLIQNSGEN 240
           ALRFRGSKAKLNFPEFVTTLPPSSPPTPNLV SPVVRPPVF FDSDYLQYSHLIQNSGEN
Sbjct: 181 ALRFRGSKAKLNFPEFVTTLPPSSPPTPNLVLSPVVRPPVFPFDSDYLQYSHLIQNSGEN 240

Query: 241 SVQPALTFDRVLSNSPFVNPNSLIYSSGTSSGASNFDLPFSQQQIAYFRPPENQSHRGXX 300
           SVQPALTFDRVLSNSPFVNPNSLI SSGTSSGASNFDLPFSQQQIAYFR         XX
Sbjct: 241 SVQPALTFDRVLSNSPFVNPNSLISSSGTSSGASNFDLPFSQQQIAYFRXXXXXXXXXXX 300

Query: 301 XXXXXPTEFGYRPPATG 317
           XXXXX TEFGYRPPATG
Sbjct: 301 XXXXXXTEFGYRPPATG 317

[Close]

BLAST of Carg24110 vs. NCBI nr
Match: XP_023536103.1 (ethylene-responsive transcription factor ERF110-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 506.9 bits (1304), Expect = 4.9e-140
Identity = 266/317 (83.91%), Postives = 269/317 (84.86%), Query Frame = 0


Query: 1   MCFLKVANHGGG-NXXXDDPEAMFSSEGELMAMVSALTHVISGGAVRASGVGCSSREDAP 60
           MCFLKVANHGGG  XXX DPE MFSSEGELMAMVSALTHVISGGA RASGVGCSSR DA 
Sbjct: 1   MCFLKVANHGGGXXXXXXDPEVMFSSEGELMAMVSALTHVISGGAPRASGVGCSSRSDAL 60

Query: 61  VTVAVPTMTATGCSRKREREEEGGIVEFRAIQSYSTPSPAILKEEGXXXXXXXXXXXXXX 120
            TV V T  ATGCSRKRERE+EGGIV+FRAIQSYS PSPAILKEEG              
Sbjct: 61  ATVVVATTMATGCSRKREREDEGGIVKFRAIQSYSMPSPAILKEEGGSSSRNTIHAATAT 120

Query: 121 XXXXXAEFPGKEITRTRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAYDSA 180
                AEFPGKEITRTRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAYDSA
Sbjct: 121 AATTTAEFPGKEITRTRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAYDSA 180

Query: 181 ALRFRGSKAKLNFPEFVTTLPPSSPPTPNLVPSPVVRPPVFQFDSDYLQYSHLIQNSGEN 240
           ALRFRGSKAKLNFPEFVTTLP SSPPTPNL PSPVVRPPVF FDSDYLQYSHLIQNSGEN
Sbjct: 181 ALRFRGSKAKLNFPEFVTTLPLSSPPTPNLAPSPVVRPPVFPFDSDYLQYSHLIQNSGEN 240

Query: 241 SVQPALTFDRVLSNSPFVNPNSLIYSSGTSSGASNFDLPFSQQQIAYFRPPENQSHRGXX 300
           S QPA TFDRVL NSPFVNPNSLI SSGTSSGA NFDLPF+QQQIAYFRPPENQSH G  
Sbjct: 241 SGQPAATFDRVLCNSPFVNPNSLISSSGTSSGALNFDLPFAQQQIAYFRPPENQSHGGGD 300

Query: 301 XXXXXPTEFGYRPPATG 317
                PTEFGYRPPATG
Sbjct: 301 SSMPPPTEFGYRPPATG 317

[Close]

BLAST of Carg24110 vs. NCBI nr
Match: XP_022973501.1 (ethylene-responsive transcription factor ERF112-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 411.8 bits (1057), Expect = 2.2e-111
Identity = 235/322 (72.98%), Postives = 241/322 (74.84%), Query Frame = 0


Query: 1   MCFLKVAN---HGGGNXXXDDPEAMFSSEGELMAMVSALTHVISGGAVRASGVGCSSRED 60
           MCFLKVAN        XXX     MFSSEGELMAMVSALTHVISGGA  ASGVG S   D
Sbjct: 1   MCFLKVANXXXXXXXXXXXXXXXXMFSSEGELMAMVSALTHVISGGAAHASGVGYSPCSD 60

Query: 61  APVTVAVPTMTATGCSRKREREEEGGIVEFRAIQSYSTPSPAILKEEGXXXXXXXXXXXX 120
           APVT        TGCSRKREREEEGG +EFRAIQSYST SP ILKEEG  XXX       
Sbjct: 61  APVT--TXXXXXTGCSRKREREEEGGRIEFRAIQSYSTLSPKILKEEGGSXXXNTIPAAT 120

Query: 121 XXXXXXXAEFPGKEITRTRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAYD 180
                  AEFPGKE TRTRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAYD
Sbjct: 121 ATAPTTTAEFPGKETTRTRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAYD 180

Query: 181 SAALRFRGSKAKLNFPEFVTTLPPSSPPTPNLVPSPVVRPPVFQFD---SDYLQYSHLIQ 240
           SAALRFRGSKAKLNFPEFVTTLPPSSPPTP+LV                 DYLQYSHLIQ
Sbjct: 181 SAALRFRGSKAKLNFPEFVTTLPPSSPPTPHLVXXXXXXXXXXXPQDALGDYLQYSHLIQ 240

Query: 241 NSGENSVQPALTFDRVLSNSPFVNPNSLIYSSGTSSGASNFDLPFSQQQIAYFRPPENQS 300
           NSGENSVQPA+TFDRVL NSPFVNPNSLI    +SSGASNFDLPF+QQQIAYFRPP NQ+
Sbjct: 241 NSGENSVQPAVTFDRVLCNSPFVNPNSLI----SSSGASNFDLPFAQQQIAYFRPPGNQN 300

Query: 301 HRGXXXXXXXPTEFGYRPPATG 317
           H G       PT   YRPPATG
Sbjct: 301 HGGGDSSMPPPTGLSYRPPATG 316

[Close]

BLAST of Carg24110 vs. NCBI nr
Match: XP_022973500.1 (ethylene-responsive transcription factor ERF112-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 404.8 bits (1039), Expect = 2.6e-109
Identity = 236/323 (73.07%), Postives = 242/323 (74.92%), Query Frame = 0


Query: 1   MCFLKVAN---HGGGNXXXDDPEAMFSSEGELMAMVSALTHVISGGAVRASGVGCSSRED 60
           MCFLKVAN        XXX     MFSSEGELMAMVSALTHVISGGA  ASGVG S   D
Sbjct: 1   MCFLKVANXXXXXXXXXXXXXXXXMFSSEGELMAMVSALTHVISGGAAHASGVGYSPCSD 60

Query: 61  APVTVAVPTMTATGCSRKREREEEGGIVEFRAIQSYSTPSPAIL-KEEGXXXXXXXXXXX 120
           APVT         GCSRKREREEEGG +EFRAIQSYST SP IL KEEG XXXXX     
Sbjct: 61  APVT--TXXXXXXGCSRKREREEEGGRIEFRAIQSYSTLSPKILVKEEGGXXXXXTIPAA 120

Query: 121 XXXXXXXXAEFPGKEITRTRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAY 180
                   AEFPGKE TRTRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAY
Sbjct: 121 TATAPTTTAEFPGKETTRTRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAY 180

Query: 181 DSAALRFRGSKAKLNFPEFVTTLPPSSPPTPNLVPSPVVRPPVFQFD---SDYLQYSHLI 240
           DSAALRFRGSKAKLNFPEFVTTLPPSSPPTP+LV                 DYLQYSHLI
Sbjct: 181 DSAALRFRGSKAKLNFPEFVTTLPPSSPPTPHLVXXXXXXXXXXXPQDALGDYLQYSHLI 240

Query: 241 QNSGENSVQPALTFDRVLSNSPFVNPNSLIYSSGTSSGASNFDLPFSQQQIAYFRPPENQ 300
           QNSGENSVQPA+TFDRVL NSPFVNPNSLI    +SSGASNFDLPF+QQQIAYFRPP NQ
Sbjct: 241 QNSGENSVQPAVTFDRVLCNSPFVNPNSLI----SSSGASNFDLPFAQQQIAYFRPPGNQ 300

Query: 301 SHRGXXXXXXXPTEFGYRPPATG 317
           +H G       PT   YRPPATG
Sbjct: 301 NHGGGDSSMPPPTGLSYRPPATG 317

[Close]

BLAST of Carg24110 vs. TAIR10
Match: AT5G50080.1 (ethylene response factor 110)

HSP 1 Score: 134.0 bits (336), Expect = 1.6e-31
Identity = 78/147 (53.06%), Postives = 94/147 (63.95%), Query Frame = 0


Query: 134 RTRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAYDSAALRFRGSKAKLNFP 193
           + RYRGVRQRPWGKWAAEIRDP +AARVWLGTFDTAEAAARAYD AALRFRG+KAKLNFP
Sbjct: 74  KRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFP 133

Query: 194 EFVTTLPPSSPPTPNLVPSPVVRPPVFQFDSDYLQYSHLIQNSGENSV--QPALTFDRVL 253
           E V  LPP  PP     P+  V     +   +Y  Y+ L+Q+SG+ S   +       + 
Sbjct: 134 EDVRILPP--PPPLLRSPADTVANKAEEDLINYWSYTKLLQSSGQRSFLERGQEESSNIF 193

Query: 254 SNSPFVNPNSLIYSSGTSSGASNFDLP 279
            +SP   P   +  S +   +SNF  P
Sbjct: 194 EHSPMEQP---LPPSSSGPSSSNFPAP 215

[Close]

BLAST of Carg24110 vs. TAIR10
Match: AT1G43160.1 (related to AP2 6)

HSP 1 Score: 118.6 bits (296), Expect = 6.8e-27
Identity = 66/112 (58.93%), Postives = 74/112 (66.07%), Query Frame = 0


Query: 136 RYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAYDSAALRFRGSKAKLNFPEF 195
           +YRGVRQRPWGKWAAEIRDP KA RVWLGTF+TAEAAARAYD+AALRFRGSKAKLNFPE 
Sbjct: 60  KYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPEN 119

Query: 196 VTTLPPSSPPTPNLVPSPVVRPPVFQFDSDYLQYSHLIQNSGENSVQPALTF 248
           V T                      Q +S +LQ          NS+QP+LT+
Sbjct: 120 VGT-------------------QTIQRNSHFLQ----------NSMQPSLTY 142

[Close]

BLAST of Carg24110 vs. TAIR10
Match: AT5G64750.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 117.1 bits (292), Expect = 2.0e-26
Identity = 60/84 (71.43%), Postives = 66/84 (78.57%), Query Frame = 0


Query: 134 RTRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAYDSAALRFRGSKAKLNFP 193
           R RYRGVRQRPWGKWAAEIRDP KAARVWLGTFD AE+AARAYD AALRFRG+KAKLNFP
Sbjct: 182 RRRYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFP 241

Query: 194 EFVTTLPPSSPPTPNLVPSPVVRP 218
           E V  + P+S     +  +   RP
Sbjct: 242 ENVKLVRPASTEAQPVHQTAAQRP 265

[Close]

BLAST of Carg24110 vs. TAIR10
Match: AT5G07310.1 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 115.2 bits (287), Expect = 7.6e-26
Identity = 53/63 (84.13%), Postives = 59/63 (93.65%), Query Frame = 0


Query: 132 ITRTRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAYDSAALRFRGSKAKLN 191
           + +  YRGVRQRPWGKWAAEIRDPQKAARVWLGTF+TAEAAA AYD+AAL+F+GSKAKLN
Sbjct: 87  LRKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLN 146

Query: 192 FPE 195
           FPE
Sbjct: 147 FPE 149

[Close]

BLAST of Carg24110 vs. TAIR10
Match: AT2G33710.2 (Integrase-type DNA-binding superfamily protein)

HSP 1 Score: 114.4 bits (285), Expect = 1.3e-25
Identity = 66/131 (50.38%), Postives = 78/131 (59.54%), Query Frame = 0


Query: 137 YRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAYDSAALRFRGSKAKLNFPEFV 196
           YRGVRQRPWGKWAAEIRDP KAARVWLGTFDTAE AA AYD AA  FRG KAKLNFPE +
Sbjct: 70  YRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFPEHI 129

Query: 197 TTLPPSSPPTP-----NLVPSPVVRPPVFQFDSDYLQYSHLIQNSGENSVQPALTFDRVL 256
              P    P+P      ++ +P         D    QY H    S ++S    L+ + + 
Sbjct: 130 RVNPTQLYPSPATSHDRIIVTPPXXXXXIAPDILLDQYGHFQSRSSDSSAN--LSMNMLS 189

Query: 257 SNSPFVNPNSL 263
           S+S  +N   L
Sbjct: 190 SSSSSLNHQGL 198

[Close]

BLAST of Carg24110 vs. Swiss-Prot
Match: sp|Q70II3|EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 GN=ERF110 PE=2 SV=2)

HSP 1 Score: 134.0 bits (336), Expect = 2.8e-30
Identity = 78/147 (53.06%), Postives = 94/147 (63.95%), Query Frame = 0


Query: 134 RTRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAYDSAALRFRGSKAKLNFP 193
           + RYRGVRQRPWGKWAAEIRDP +AARVWLGTFDTAEAAARAYD AALRFRG+KAKLNFP
Sbjct: 74  KRRYRGVRQRPWGKWAAEIRDPHRAARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFP 133

Query: 194 EFVTTLPPSSPPTPNLVPSPVVRPPVFQFDSDYLQYSHLIQNSGENSV--QPALTFDRVL 253
           E V  LPP  PP     P+  V     +   +Y  Y+ L+Q+SG+ S   +       + 
Sbjct: 134 EDVRILPP--PPPLLRSPADTVANKAEEDLINYWSYTKLLQSSGQRSFLERGQEESSNIF 193

Query: 254 SNSPFVNPNSLIYSSGTSSGASNFDLP 279
            +SP   P   +  S +   +SNF  P
Sbjct: 194 EHSPMEQP---LPPSSSGPSSSNFPAP 215

[Close]

BLAST of Carg24110 vs. Swiss-Prot
Match: sp|Q7G1L2|RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana OX=3702 GN=RAP2-6 PE=2 SV=2)

HSP 1 Score: 118.6 bits (296), Expect = 1.2e-25
Identity = 66/112 (58.93%), Postives = 74/112 (66.07%), Query Frame = 0


Query: 136 RYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAYDSAALRFRGSKAKLNFPEF 195
           +YRGVRQRPWGKWAAEIRDP KA RVWLGTF+TAEAAARAYD+AALRFRGSKAKLNFPE 
Sbjct: 60  KYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFPEN 119

Query: 196 VTTLPPSSPPTPNLVPSPVVRPPVFQFDSDYLQYSHLIQNSGENSVQPALTF 248
           V T                      Q +S +LQ          NS+QP+LT+
Sbjct: 120 VGT-------------------QTIQRNSHFLQ----------NSMQPSLTY 142

[Close]

BLAST of Carg24110 vs. Swiss-Prot
Match: sp|Q9FGF8|ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana OX=3702 GN=ABR1 PE=2 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.6e-25
Identity = 60/84 (71.43%), Postives = 66/84 (78.57%), Query Frame = 0


Query: 134 RTRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAYDSAALRFRGSKAKLNFP 193
           R RYRGVRQRPWGKWAAEIRDP KAARVWLGTFD AE+AARAYD AALRFRG+KAKLNFP
Sbjct: 182 RRRYRGVRQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFP 241

Query: 194 EFVTTLPPSSPPTPNLVPSPVVRP 218
           E V  + P+S     +  +   RP
Sbjct: 242 ENVKLVRPASTEAQPVHQTAAQRP 265

[Close]

BLAST of Carg24110 vs. Swiss-Prot
Match: sp|Q9LY29|EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana OX=3702 GN=ERF115 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.4e-24
Identity = 53/63 (84.13%), Postives = 59/63 (93.65%), Query Frame = 0


Query: 132 ITRTRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAYDSAALRFRGSKAKLN 191
           + +  YRGVRQRPWGKWAAEIRDPQKAARVWLGTF+TAEAAA AYD+AAL+F+GSKAKLN
Sbjct: 87  LRKRHYRGVRQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLN 146

Query: 192 FPE 195
           FPE
Sbjct: 147 FPE 149

[Close]

BLAST of Carg24110 vs. Swiss-Prot
Match: sp|P93007|EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana OX=3702 GN=ERF112 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.3e-24
Identity = 66/131 (50.38%), Postives = 78/131 (59.54%), Query Frame = 0


Query: 137 YRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAYDSAALRFRGSKAKLNFPEFV 196
           YRGVRQRPWGKWAAEIRDP KAARVWLGTFDTAE AA AYD AA  FRG KAKLNFPE +
Sbjct: 70  YRGVRQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFPEHI 129

Query: 197 TTLPPSSPPTP-----NLVPSPVVRPPVFQFDSDYLQYSHLIQNSGENSVQPALTFDRVL 256
              P    P+P      ++ +P         D    QY H    S ++S    L+ + + 
Sbjct: 130 RVNPTQLYPSPATSHDRIIVTPPXXXXXIAPDILLDQYGHFQSRSSDSSAN--LSMNMLS 189

Query: 257 SNSPFVNPNSL 263
           S+S  +N   L
Sbjct: 190 SSSSSLNHQGL 198

[Close]

BLAST of Carg24110 vs. TrEMBL
Match: tr|A0A0C7KKK2|A0A0C7KKK2_CUCSA (Ethylene-responsive transcription factor 114 OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 7.4e-76
Identity = 205/328 (62.50%), Postives = 225/328 (68.60%), Query Frame = 0


Query: 1   MCF-LKVANHGG--GNXXXDDPEAMFSSE-GELMAMVSALTHVISGGAVRASGVGCSSRE 60
           MC+ LKVAN GG    XXX + E MFSS  GELMAMVSALTHVISGG+            
Sbjct: 55  MCYILKVANQGGXXXXXXXXELEGMFSSSAGELMAMVSALTHVISGGSA----------- 114

Query: 61  DAPVTVAVPT-MTATGCSRKRERE---EEGGIVEFRAIQSYSTPSPAILKEE---GXXXX 120
            AP TV       ATGC RKRERE   E G IV+  A+QS+S PSPAI   E    XXXX
Sbjct: 115 -APATVRTAVGAPATGC-RKREREEGGESGMIVDSTAMQSFSMPSPAIFLREXXXXXXXX 174

Query: 121 XXXXXXXXXXXXXXXAEFPGKEITRTRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTA 180
           XXXXXXXXXXXXXX A F G++  R RYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTA
Sbjct: 175 XXXXXXXXXXXXXXAAAFSGEDRIRRRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTA 234

Query: 181 EAAARAYDSAALRFRGSKAKLNFPEFVTTLPPSS-PPTPNLVPSPVVRPPVFQFDSDYLQ 240
           EAAARAYD AALRFRGSKAKLNFPEFV+  PPSS P   +L  SPVV PP      +YLQ
Sbjct: 235 EAAARAYDGAALRFRGSKAKLNFPEFVSVFPPSSLPSATHLASSPVVVPPQDAI-GNYLQ 294

Query: 241 YSHLIQNSGENSVQPALTFDRVLSNSPFVNPNSLIYSSGTSSGASNFDLPFSQQQIAYFR 300
           YS L+ NS E S QP   F+RVL NSP VNP+SL+    +SSG SNF  P S+QQ+ ++ 
Sbjct: 295 YSRLLPNSRETSSQPVPAFERVLCNSPLVNPSSLV----SSSGVSNFPFPSSEQQVRHYL 354

Query: 301 PPENQSHRGXXXXXXXPTEFGYRPPATG 317
           PPENQS          PT F YRPPA G
Sbjct: 355 PPENQSQGNGGSSMPFPTGFSYRPPANG 364

[Close]

BLAST of Carg24110 vs. TrEMBL
Match: tr|A0A0A0KBY0|A0A0A0KBY0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G017030 PE=4 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 7.4e-76
Identity = 205/328 (62.50%), Postives = 225/328 (68.60%), Query Frame = 0


Query: 1   MCF-LKVANHGG--GNXXXDDPEAMFSSE-GELMAMVSALTHVISGGAVRASGVGCSSRE 60
           MC+ LKVAN GG    XXX + E MFSS  GELMAMVSALTHVISGG+            
Sbjct: 1   MCYILKVANQGGXXXXXXXXELEGMFSSSAGELMAMVSALTHVISGGSA----------- 60

Query: 61  DAPVTVAVPT-MTATGCSRKRERE---EEGGIVEFRAIQSYSTPSPAILKEE---GXXXX 120
            AP TV       ATGC RKRERE   E G IV+  A+QS+S PSPAI   E    XXXX
Sbjct: 61  -APATVRTAVGAPATGC-RKREREEGGESGMIVDSTAMQSFSMPSPAIFLREXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXAEFPGKEITRTRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTA 180
           XXXXXXXXXXXXXX A F G++  R RYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTA
Sbjct: 121 XXXXXXXXXXXXXXAAAFSGEDRIRRRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTA 180

Query: 181 EAAARAYDSAALRFRGSKAKLNFPEFVTTLPPSS-PPTPNLVPSPVVRPPVFQFDSDYLQ 240
           EAAARAYD AALRFRGSKAKLNFPEFV+  PPSS P   +L  SPVV PP      +YLQ
Sbjct: 181 EAAARAYDGAALRFRGSKAKLNFPEFVSVFPPSSLPSATHLASSPVVVPPQDAI-GNYLQ 240

Query: 241 YSHLIQNSGENSVQPALTFDRVLSNSPFVNPNSLIYSSGTSSGASNFDLPFSQQQIAYFR 300
           YS L+ NS E S QP   F+RVL NSP VNP+SL+    +SSG SNF  P S+QQ+ ++ 
Sbjct: 241 YSRLLPNSRETSSQPVPAFERVLCNSPLVNPSSLV----SSSGVSNFPFPSSEQQVRHYL 300

Query: 301 PPENQSHRGXXXXXXXPTEFGYRPPATG 317
           PPENQS          PT F YRPPA G
Sbjct: 301 PPENQSQGNGGSSMPFPTGFSYRPPANG 310

[Close]

BLAST of Carg24110 vs. TrEMBL
Match: tr|A0A1S3CIC7|A0A1S3CIC7_CUCME (ethylene-responsive transcription factor ERF110 OS=Cucumis melo OX=3656 GN=LOC103501300 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.5e-68
Identity = 177/338 (52.37%), Postives = 198/338 (58.58%), Query Frame = 0


Query: 1   MCFLKVANHGGGNXXXDDP--EAMFSSE-GELMAMVSALTHVISGGAVRASGVGCSSRED 60
           MC+LKVAN G   XXX     E M SS  GELMAMVSALT VISGG+             
Sbjct: 1   MCYLKVANQGXXXXXXXXXXLEGMLSSSAGELMAMVSALTRVISGGSA------------ 60

Query: 61  APVTVAVPTMTATGCSRKREREEE----------------GGIVEFRAIQSYSTPSPAIL 120
           AP TV        GC RKR REEE                GGIV+  A+QS+S PSP I 
Sbjct: 61  APATVG-------GC-RKRGREEEGESRIMWERGVGRGNRGGIVDSTAMQSFSMPSPPIF 120

Query: 121 KEEG--XXXXXXXXXXXXXXXXXXXAEFPGKEITRTRYRGVRQRPWGKWAAEIRDPQKAA 180
            +EG                     A F G+   R RYRGVRQRPWGKWAAEIRDPQKAA
Sbjct: 121 LKEGGSSSSNSISIMTAPTTAPTMTATFSGENRIRRRYRGVRQRPWGKWAAEIRDPQKAA 180

Query: 181 RVWLGTFDTAEAAARAYDSAALRFRGSKAKLNFPEFVTTLPPSS-PPTPNLVPSPVVRPP 240
           RVWLGTFDTAEAAARAYD AALRFRGSKAKLNFPE V+  PPSS     +L  SPVV PP
Sbjct: 181 RVWLGTFDTAEAAARAYDGAALRFRGSKAKLNFPELVSVFPPSSLQSATHLASSPVVVPP 240

Query: 241 VFQFDSDYLQYSHLIQNSGENSVQPALTFDRVLSNSPFVNPNSLIYSSGTSSGASNFDLP 300
                 +YLQYSH+  NS E S Q    F+R+L NS  VNP+ L+    +SSG SNF  P
Sbjct: 241 Q-DAVGNYLQYSHMFPNSRETSSQAVPAFERMLCNSTSVNPSPLV----SSSGVSNFPFP 300

Query: 301 FSQQQIAYFRPPENQSHRGXXXXXXXPTEFGYRPPATG 317
           FS QQ+ ++ PP+NQS  G        T F YRPPA+G
Sbjct: 301 FSPQQLRHYGPPKNQSQGGGGSSMPSSTGFSYRPPASG 313

[Close]

BLAST of Carg24110 vs. TrEMBL
Match: tr|A0A2J6KSP5|A0A2J6KSP5_LACSA (Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_1X5340 PE=4 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 8.3e-35
Identity = 151/369 (40.92%), Postives = 185/369 (50.14%), Query Frame = 0


Query: 1   MCFLKVAN------HGGGNXXXDD-------------PEAMFSSE----GELMAMVSALT 60
           MCF KVAN      +   +   DD             P  MFSSE    GEL AMV+ALT
Sbjct: 1   MCFTKVANSRESGDYANFDRDTDDGXXXXXXXXXXXPPPDMFSSEYSMSGELSAMVTALT 60

Query: 61  HVISG------GAVRAS-----GVGCSSREDAPVTVAVPTMTATGCSRKREREEE----- 120
           HV+SG      G   +S     G G     D+P +    + + +   +KR R++E     
Sbjct: 61  HVVSGHGSGGIGGASSSLSFPGGAGGHYSMDSPSSAYSSSSSGSFAGQKRVRDQEESVNQ 120

Query: 121 ----------GGIVEFRAIQSYSTPSPAILKEEGXXXXXXXXXXXXXXXXXXXAEFPGKE 180
                     GG  + R                 XXXXXXXXXXXXXXXXXXX E    E
Sbjct: 121 FPEQFVQRFYGGYTDVRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMEINQYE 180

Query: 181 IT---RTRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAYDSAALRFRGSKA 240
            T   R +YRGVRQRPWGKWAAEIRDP KAARVWLGTFDTAEAAARAYD AALRFRG++A
Sbjct: 181 QTGERRRKYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRGNRA 240

Query: 241 KLNFPEFVTTLPP-----------SSPPTPNLV---PSPVVRPPVFQ-----FDSDYLQY 295
           KLNFPE V  LPP           S+ P        P P+++P  FQ        DY QY
Sbjct: 241 KLNFPENVRLLPPPQILPATQLAISTSPAAQFTIRQPPPLLQPQQFQQPGTTVARDYWQY 300

[Close]

BLAST of Carg24110 vs. TrEMBL
Match: tr|A0A251VGN2|A0A251VGN2_HELAN (Putative DNA-binding domain-containing protein OS=Helianthus annuus OX=4232 GN=HannXRQ_Chr02g0044641 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 1.1e-34
Identity = 152/387 (39.28%), Postives = 188/387 (48.58%), Query Frame = 0


Query: 1   MCFLKVANH----------------GGGNXXXDDPEAMFSSE----GELMAMVSALTHVI 60
           MCF+KVAN                  GG+     P  MFS+E    GEL AMVSALTHV+
Sbjct: 1   MCFIKVANSRDSGDYASFDRVTDEGEGGSPPPQSPPDMFSTEYSMSGELSAMVSALTHVV 60

Query: 61  SGGAVRASG---VGCSSRE-DAPVTVAVPTMTAT--GCSRKREREEE------------- 120
           SG     SG   V  S R  D+P +    + + +  G  R R+ +EE             
Sbjct: 61  SGHGGGGSGGFNVSPSFRGLDSPSSAYSSSSSGSLAGQKRVRDHQEESVNQFPEQFHQGF 120

Query: 121 -GGIVEFRA----IQSYSTPSPAILKEEGXXXXXXXXXXXXXXXXXXXAEFPGK--EITR 180
            GG+ +FR                     XXXXXXXXXXXX       A  P +  EI  
Sbjct: 121 YGGLADFRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRNPAVEANQPEQTGEIRA 180

Query: 181 TRYRGVRQRPWGKWAAEIRDPQKAARVWLGTFDTAEAAARAYDSAALRFRGSKAKLNFPE 240
            +YRGVRQRPWGKWAAEIRDP KAARVWLGTFDTAEAAARAYD AALRFRG++AKLNFPE
Sbjct: 181 RKYRGVRQRPWGKWAAEIRDPHKAARVWLGTFDTAEAAARAYDEAALRFRGNRAKLNFPE 240

Query: 241 FVTTLPP-----------SSPPTP--NLVPSPVVRPPVFQFDS-----DYLQYSHLIQ-N 300
            V  LP            S+PPT   ++   P + P  FQ        DY QYS L+Q N
Sbjct: 241 NVRLLPQQQIRPTTQLVISNPPTTQFSIRQQPPMPPHRFQLPDATTAHDYWQYSQLLQSN 300

Query: 301 SGENSVQPALTFD---RVLSNSPFVNPNSLIYSSGTSSGASNFDLPFSQQQIAY--FRPP 314
                 QP    +   ++ + S   + N+   +  +SS  +N+ L F  Q   Y  FR P
Sbjct: 301 MDFRQPQPQQQHNLLPQMFNTSTMGSLNTQASNISSSSSTTNYPLFFPNQPSGYLDFRQP 360

The following BLAST results are available for this feature:

BLAST of Carg24110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925393.1	4.6e-146	89.24	ethylene-responsive transcription factor ERF110-like isoform X2 [Cucurbita mosch...	[more]
XP_022925392.1	7.3e-144	90.22	ethylene-responsive transcription factor ERF110-like isoform X1 [Cucurbita mosch...	[more]
XP_023536103.1	4.9e-140	83.91	ethylene-responsive transcription factor ERF110-like [Cucurbita pepo subsp. pepo...	[more]
XP_022973501.1	2.2e-111	72.98	ethylene-responsive transcription factor ERF112-like isoform X2 [Cucurbita maxim...	[more]
XP_022973500.1	2.6e-109	73.07	ethylene-responsive transcription factor ERF112-like isoform X1 [Cucurbita maxim...	[more]

BLAST of Carg24110 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G50080.1	1.6e-31	53.06	ethylene response factor 110	[more]
AT1G43160.1	6.8e-27	58.93	related to AP2 6	[more]
AT5G64750.1	2.0e-26	71.43	Integrase-type DNA-binding superfamily protein	[more]
AT5G07310.1	7.6e-26	84.13	Integrase-type DNA-binding superfamily protein	[more]
AT2G33710.2	1.3e-25	50.38	Integrase-type DNA-binding superfamily protein	[more]

BLAST of Carg24110 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q70II3\|EF110_ARATH	2.8e-30	53.06	Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q7G1L2\|RAP26_ARATH	1.2e-25	58.93	Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|Q9FGF8\|ABR1_ARATH	3.6e-25	71.43	Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
sp\|Q9LY29\|EF115_ARATH	1.4e-24	84.13	Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana OX=3702 ...	[more]
sp\|P93007\|EF112_ARATH	2.3e-24	50.38	Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Carg24110 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0C7KKK2\|A0A0C7KKK2_CUCSA	7.4e-76	62.50	Ethylene-responsive transcription factor 114 OS=Cucumis sativus OX=3659 PE=2 SV=...	[more]
tr\|A0A0A0KBY0\|A0A0A0KBY0_CUCSA	7.4e-76	62.50	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G017030 PE=4 SV=1	[more]
tr\|A0A1S3CIC7\|A0A1S3CIC7_CUCME	1.5e-68	52.37	ethylene-responsive transcription factor ERF110 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
tr\|A0A2J6KSP5\|A0A2J6KSP5_LACSA	8.3e-35	40.92	Uncharacterized protein OS=Lactuca sativa OX=4236 GN=LSAT_1X5340 PE=4 SV=1	[more]
tr\|A0A251VGN2\|A0A251VGN2_HELAN	1.1e-34	39.28	Putative DNA-binding domain-containing protein OS=Helianthus annuus OX=4232 GN=H...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003700	transcription factor activity, sequence-specific DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR016177	DNA-bd_dom_sf
IPR036955	AP2/ERF_dom_sf
IPR001471	AP2/ERF_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005667	transcription factor complex
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24110-RA	Carg24110-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 159..175 score: 72.94 coord: 137..148 score: 76.67
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 136..199 e-value: 5.4E-37 score: 138.9
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 135..185 e-value: 2.1E-14 score: 53.4
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 136..193 score: 26.002
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 135..194 e-value: 9.6599E-25 score: 93.8754
IPR036955	AP2/ERF domain superfamily	GENE3D	G3DSA:3.30.730.10		coord: 135..195 e-value: 7.8E-32 score: 110.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 286..300
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 286..316
None	No IPR available	PANTHER	PTHR31190	FAMILY NOT NAMED	coord: 24..251
None	No IPR available	PANTHER	PTHR31190:SF66	ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ABR1-RELATED	coord: 24..251
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	SSF54171	DNA-binding domain	coord: 136..193

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24110	Cla003789	Watermelon (97103) v1	carwmB0675
Carg24110	Csa6G017030	Cucumber (Chinese Long) v2	carcuB0699
Carg24110	MELO3C024989	Melon (DHL92) v3.5.1	carmeB0678
Carg24110	ClCG08G002610	Watermelon (Charleston Gray)	carwcgB0653
Carg24110	CSPI06G02590	Wild cucumber (PI 183967)	carcpiB0711
Carg24110	Cucsa.365850	Cucumber (Gy14) v1	carcgyB0757
Carg24110	CmaCh09G012870	Cucurbita maxima (Rimu)	carcmaB0953
Carg24110	CmoCh09G012450	Cucurbita moschata (Rifu)	carcmoB0929
Carg24110	Lsi08G002460	Bottle gourd (USVL1VR-Ls)	carlsiB617
Carg24110	Cp4.1LG06g09490	Cucurbita pepo (Zucchini)	carcpeB0954
Carg24110	CsGy6G002650	Cucumber (Gy14) v2	carcgybB0675
Carg24110	MELO3C024989.2	Melon (DHL92) v3.6.1	carmedB0690
Carg24110	CsaV3_6G002790	Cucumber (Chinese Long) v3	carcucB0713
Carg24110	Cla97C08G146560	Watermelon (97103) v2	carwmbB0703
Carg24110	Bhi04G001754	Wax gourd	carwgoB0794

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None