Carg24066 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ACTCGGAGTAACGTCGTCTGGCAACTCAGTTCCTCCCGAGTCGTCACTTCATTCCAACGCGGCCATGGCTTCCGTCCACGCCATAGCTCCTCAGGGGTTCACATCCTTCACTACGGAAAAACGAGCCTGTCCACGCGCCGCTCCCAGTTTCCACGCGTTGAAGCTTCCGCAGCGTTCGATTGTCTCGAGAAATGGGCGGAAGTTGAGTTGGGCGTTGAACTCGACGGTGGAAGAGCTCGATGTTATCCCGGTGCAGAGCGCTGATTTCACCGACCAGCAAGAAGGAGTGGCGGTGAGCCGGGTGGAGAGGGAGAGCGTGGAGGGAGAGATGGGGAGTGCGGTAGGTGGATTCGGCGAGCTTTCGTTGGGAGGCGCTGGTGAAATTCAGGGGTTTTCTTCTTCTGGTGCTGTTGGAGATGGCGGTGTAACAGAGAGAGGGGAAAATGAGAAGGTCATAATTGATCGGATTATAAATGCGACCATTGTTCTTGCGGCGGGTTCTTATGCTATCACGAAGTTGCTCACCATCGATCAAGATTATTGGCATGTGAGTCATACTTTTCAATTGCTTCAATTCAATTGTTTTCTGTGTTTACTTGGGATAGAATGTTGGTTGGTTCAAATTGAATAGTTGGGGAACTGCTTTGAAGAAGGTAATCGCTAACTTGAATATACTGTCACTCTCAGATTGATAAATAAAACACATAAACTATGCTATTTGTATTAGTTCAGCAGAGAGATTATGCTCAAAGTGGACAATATCGTACTATTATGGAGAGTCGTGATTTCTAATATGATATTGAACAAAGAAGGTGGAGTTAAAACGTGACTCATGTGTCAAACAAAGGGCGTACCTTCGAGGGCTCTAGAGAAATGAGTCGAGCTTCGATTAGGGGGAGGGAGGTTGTTCGAGGGCTACATTGACCTCAAGGAAGGCTCTATGGTATGCTTTGTTTTAGAAGAGGATTGTTGGTGGGAGAGTCTCACATTGGCTAATTAAGAGGAAGATCATGAGTTTATAAGCAAAGAATACTATCTCCATTGGTATGAGGCCTTTTGAGGAAACCAAAAGTAAAGCCATGAGAGTTTATGCTCAAAGTGGACAATATCATATAATTGTGAAGAATCGTGATTCCTAACAACAACTACTGAGGAGTTCATTTATTTGCATTTTGAGAACGGAAAGTTATGTGGTGGTTATATGATATCTATACTAGGTTTGCTTTACTGAAAGCCAGGAATAAGTTGAACCTTTTCTGCTTCCACAAAAAAATGGAAAAGCTGTAATGAGTTTCATGATTTGGGAAGAAGAAATGCAACTTAAATTGCTGTAGAAAAGAAGTTGTAGAGTCACATTTTTTTTTGGATCAATCACCAGGAAGCACCCAAAAGCACTCGCAAGCACTCCCTAACACGTTCTATATCTCAAAATCCTTAAAGATTAAGCTCCCGCATTTCATGGTCCATGCTATAGAATAGTGATCCTAATAATTCCCCAAACCCCAGTAATTCGAGCTATTCGTGAAGAGGCTAAAAACACAATCCGAGTGTTTTTAGTCACTCAAGATGTTCAGCACTTGGACAATGGTCTAAATAAGTGCGTTGATGTGTAATCTTAGAGTAACTCGCGCTTCAAACATGTCATCTCTAGACACCATTCTAATTCTTTTTCCTTCCAACCTCTAGGGATGGACACTTTTTGAAATACTGAGATATGCCCCTCAACACAACTGGAGTGCTTATGAGGAAGCTCTTAAGACACACCCAGTTCTCGCTAAAATGGTGATTAGTGGAGTGGTGTACTCTCTTGGAGATTGGATTGCGCAGGTAAATTCATTCATACCATCAAATTTTTGCATCCCATAAAATATTCTCTTTGTATGCCCATGTAAATGATTTTTCTCATTTTTAAGTTTCTTCTCATAGTGTGTCGAAGGAAAACCTCTATTCGAATTTGATCGTACACGCATGTTCAGATCAGGCCTTGTTGGCTTTTCTCTACATGGTTCCCTTTCCCACTACTACTATCATTTTTGTGAGGTATGTATGCCTTCTGAATTTTATTCCTTGTGTTTTGATTTCAAGATGTTTCCTTACCTTAACATGAACCTCAATTTGTTTGAGTTGTAGAAAAGTTTCAGTCTCATTACTTCCCGTTTAAGAAGAAATCATCTGTGTTGTGTTTTCCAGGGCCTTTTTCCTTTTCAAGATTGGTGGGTAGTTCCTGCTAAAGTAGCATTCGATCAAACGGCATGGTCAGCAGTTTGGAACAGCATTTATTTTGTGGTATTAGGATTCCTACGGCTCGAGTCCCCAGTTTCTATATTTAATGAACTAAGGGCGACATTTTGGCCTATGCTTACCGTAAGAGATTCTATTCTTTTCTTGAATCTTCACACTTCTATGAGTTAGTTGAAATAAGACATCCCATTGGGTTCCTGTTTCTTGTTCTAACTATTGTTGGGAAGTCATTTTCTGGTTTAGACTATCCCTTATCAATATGATTCATTTCTCGTCATACATTTTTCGTCTTCTGAACTTTCTCGTTCTTGGTTCTTTCGTATGTAGTAAGTTTAACATACGCACACTAGTTTTTTGGTCACCTTTCCCGTATGGTTGACCCTTGATTTAATTGTGAATTCAGTTTTTCATACATACGAAGAAACAAGCAATATCATGAGAGTTTGAATCTAACTTTTATTCACACCATAGCAACTATGAAAATCTCATTACCAGAAGTTTGAAGACTATCAGTGCTTTTCAATTGAATTTGATGTTGGTTTGAATGGACGTTCTTTTATTCTCTGAGTTTAATTTTGGATTTTTGTTTTATCCAGGCGGGTTGGAAACTTTGGCCATTTGCTCATCTTATCACATACGGTGTTGTTCCTGTAGAACAAAGACTCCTCTGGGTTGATTGTGTGGAGCTGATCTGGGTGACCATACTCTCCACGTAAGCATGTAGTAATATCATTGAGTTAGTCATTTAATGTTATGTTTTAATACATCTATTTAGGAGTGAGCATAATGCAAGTGAAATGGTGTGGAGCAACATACTTTCCTGTGAGCTAGTTGTCTCCTAACCTTTGCCAATTTATCTGATTGATAGTTATTCGAACGAGAAATCGGAGGCTAGAATCTCTGAGGTAGCTACAGATTCCGGTTCGGATTCTCTTTCGACAGATTCAACTCAGGTATTTTGGTCTTAGAACTCTTGATCGACCATTTTCTCTAATATCCCTGACTGGACTAACCATTTCCGTTGTACTTTTCTTTGGTTTTATCAGGGCTAATGACAGGAAAAACCATGAAATATGTGTTGTTCACTTCAACTCTGAGAATCTTAAGAGAAAGATTTACTCCGAGCGTCTAAGATCGGAAACGGTACAATGTATTATACGTATAAACATGATTCGAGCTGCAAATCTTGATTGGTGTACATTGTGTAGAAATCTCTGAACATTATTGTAGATGTCCACTTTACACGTTTTCTTTTTGCGTTTGATAGCTTTTCATCAACTGTATAAATATAGTGAAATATATAGAATCTTGTACTCCCATTGGCTCTTC ACTCGGAGTAACGTCGTCTGGCAACTCAGTTCCTCCCGAGTCGTCACTTCATTCCAACGCGGCCATGGCTTCCGTCCACGCCATAGCTCCTCAGGGGTTCACATCCTTCACTACGGAAAAACGAGCCTGTCCACGCGCCGCTCCCAGTTTCCACGCGTTGAAGCTTCCGCAGCGTTCGATTGTCTCGAGAAATGGGCGGAAGTTGAGTTGGGCGTTGAACTCGACGGTGGAAGAGCTCGATGTTATCCCGGTGCAGAGCGCTGATTTCACCGACCAGCAAGAAGGAGTGGCGGTGAGCCGGGTGGAGAGGGAGAGCGTGGAGGGAGAGATGGGGAGTGCGGTAGGTGGATTCGGCGAGCTTTCGTTGGGAGGCGCTGGTGAAATTCAGGGGTTTTCTTCTTCTGGTGCTGTTGGAGATGGCGGTGTAACAGAGAGAGGGGAAAATGAGAAGGTCATAATTGATCGGATTATAAATGCGACCATTGTTCTTGCGGCGGGTTCTTATGCTATCACGAAGTTGCTCACCATCGATCAAGATTATTGGCATGGATGGACACTTTTTGAAATACTGAGATATGCCCCTCAACACAACTGGAGTGCTTATGAGGAAGCTCTTAAGACACACCCAGTTCTCGCTAAAATGGTGATTAGTGGAGTGGTGTACTCTCTTGGAGATTGGATTGCGCAGTGTGTCGAAGGAAAACCTCTATTCGAATTTGATCGTACACGCATGTTCAGATCAGGCCTTGTTGGCTTTTCTCTACATGGTTCCCTTTCCCACTACTACTATCATTTTTGTGAGGGCCTTTTTCCTTTTCAAGATTGGTGGGTAGTTCCTGCTAAAGTAGCATTCGATCAAACGGCATGGTCAGCAGTTTGGAACAGCATTTATTTTGTGGTATTAGGATTCCTACGGCTCGAGTCCCCAGTTTCTATATTTAATGAACTAAGGGCGACATTTTGGCCTATGCTTACCGCGGGTTGGAAACTTTGGCCATTTGCTCATCTTATCACATACGGTGTTGTTCCTGTAGAACAAAGACTCCTCTGGGTTGATTGTGTGGAGCTGATCTGGGTGACCATACTCTCCACTTATTCGAACGAGAAATCGGAGGCTAGAATCTCTGAGGTAGCTACAGATTCCGGTTCGGATTCTCTTTCGACAGATTCAACTCAGGGCTAATGACAGGAAAAACCATGAAATATGTGTTGTTCACTTCAACTCTGAGAATCTTAAGAGAAAGATTTACTCCGAGCGTCTAAGATCGGAAACGGTACAATGTATTATACGTATAAACATGATTCGAGCTGCAAATCTTGATTGGTGTACATTGTGTAGAAATCTCTGAACATTATTGTAGATGTCCACTTTACACGTTTTCTTTTTGCGTTTGATAGCTTTTCATCAACTGTATAAATATAGTGAAATATATAGAATCTTGTACTCCCATTGGCTCTTC ATGGCTTCCGTCCACGCCATAGCTCCTCAGGGGTTCACATCCTTCACTACGGAAAAACGAGCCTGTCCACGCGCCGCTCCCAGTTTCCACGCGTTGAAGCTTCCGCAGCGTTCGATTGTCTCGAGAAATGGGCGGAAGTTGAGTTGGGCGTTGAACTCGACGGTGGAAGAGCTCGATGTTATCCCGGTGCAGAGCGCTGATTTCACCGACCAGCAAGAAGGAGTGGCGGTGAGCCGGGTGGAGAGGGAGAGCGTGGAGGGAGAGATGGGGAGTGCGGTAGGTGGATTCGGCGAGCTTTCGTTGGGAGGCGCTGGTGAAATTCAGGGGTTTTCTTCTTCTGGTGCTGTTGGAGATGGCGGTGTAACAGAGAGAGGGGAAAATGAGAAGGTCATAATTGATCGGATTATAAATGCGACCATTGTTCTTGCGGCGGGTTCTTATGCTATCACGAAGTTGCTCACCATCGATCAAGATTATTGGCATGGATGGACACTTTTTGAAATACTGAGATATGCCCCTCAACACAACTGGAGTGCTTATGAGGAAGCTCTTAAGACACACCCAGTTCTCGCTAAAATGGTGATTAGTGGAGTGGTGTACTCTCTTGGAGATTGGATTGCGCAGTGTGTCGAAGGAAAACCTCTATTCGAATTTGATCGTACACGCATGTTCAGATCAGGCCTTGTTGGCTTTTCTCTACATGGTTCCCTTTCCCACTACTACTATCATTTTTGTGAGGGCCTTTTTCCTTTTCAAGATTGGTGGGTAGTTCCTGCTAAAGTAGCATTCGATCAAACGGCATGGTCAGCAGTTTGGAACAGCATTTATTTTGTGGTATTAGGATTCCTACGGCTCGAGTCCCCAGTTTCTATATTTAATGAACTAAGGGCGACATTTTGGCCTATGCTTACCGCGGGTTGGAAACTTTGGCCATTTGCTCATCTTATCACATACGGTGTTGTTCCTGTAGAACAAAGACTCCTCTGGGTTGATTGTGTGGAGCTGATCTGGGTGACCATACTCTCCACTTATTCGAACGAGAAATCGGAGGCTAGAATCTCTGAGGTAGCTACAGATTCCGGTTCGGATTCTCTTTCGACAGATTCAACTCAGGGCTAA MASVHAIAPQGFTSFTTEKRACPRAAPSFHALKLPQRSIVSRNGRKLSWALNSTVEELDVIPVQSADFTDQQEGVAVSRVERESVEGEMGSAVGGFGELSLGGAGEIQGFSSSGAVGDGGVTERGENEKVIIDRIINATIVLAAGSYAITKLLTIDQDYWHGWTLFEILRYAPQHNWSAYEEALKTHPVLAKMVISGVVYSLGDWIAQCVEGKPLFEFDRTRMFRSGLVGFSLHGSLSHYYYHFCEGLFPFQDWWVVPAKVAFDQTAWSAVWNSIYFVVLGFLRLESPVSIFNELRATFWPMLTAGWKLWPFAHLITYGVVPVEQRLLWVDCVELIWVTILSTYSNEKSEARISEVATDSGSDSLSTDSTQG
BLAST of Carg24066 vs. NCBI nr
Match: XP_023553159.1 (uncharacterized protein LOC111810648 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 727.6 bits (1877), Expect = 2.1e-206 Identity = 362/372 (97.31%), Postives = 366/372 (98.39%), Query Frame = 0
BLAST of Carg24066 vs. NCBI nr
Match: XP_022929497.1 (uncharacterized protein LOC111436049 isoform X1 [Cucurbita moschata]) HSP 1 Score: 725.7 bits (1872), Expect = 7.9e-206 Identity = 363/372 (97.58%), Postives = 365/372 (98.12%), Query Frame = 0
BLAST of Carg24066 vs. NCBI nr
Match: XP_022929498.1 (uncharacterized protein LOC111436049 isoform X2 [Cucurbita moschata]) HSP 1 Score: 723.4 bits (1866), Expect = 3.9e-205 Identity = 362/371 (97.57%), Postives = 364/371 (98.11%), Query Frame = 0
BLAST of Carg24066 vs. NCBI nr
Match: XP_022985234.1 (uncharacterized protein LOC111483289 isoform X1 [Cucurbita maxima]) HSP 1 Score: 719.5 bits (1856), Expect = 5.7e-204 Identity = 360/372 (96.77%), Postives = 363/372 (97.58%), Query Frame = 0
BLAST of Carg24066 vs. NCBI nr
Match: XP_022985235.1 (uncharacterized protein LOC111483289 isoform X2 [Cucurbita maxima]) HSP 1 Score: 717.2 bits (1850), Expect = 2.8e-203 Identity = 359/371 (96.77%), Postives = 362/371 (97.57%), Query Frame = 0
BLAST of Carg24066 vs. TAIR10
Match: AT1G52870.2 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein) HSP 1 Score: 462.2 bits (1188), Expect = 3.0e-130 Identity = 247/370 (66.76%), Postives = 282/370 (76.22%), Query Frame = 0
BLAST of Carg24066 vs. TAIR10
Match: AT4G03410.2 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein) HSP 1 Score: 399.4 bits (1025), Expect = 2.4e-111 Identity = 182/242 (75.21%), Postives = 208/242 (85.95%), Query Frame = 0
BLAST of Carg24066 vs. TAIR10
Match: AT2G14860.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein) HSP 1 Score: 79.7 bits (195), Expect = 4.1e-15 Identity = 49/175 (28.00%), Postives = 76/175 (43.43%), Query Frame = 0
BLAST of Carg24066 vs. TAIR10
Match: AT4G33905.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein) HSP 1 Score: 75.9 bits (185), Expect = 6.0e-14 Identity = 48/177 (27.12%), Postives = 77/177 (43.50%), Query Frame = 0
BLAST of Carg24066 vs. TAIR10
Match: AT3G24570.1 (Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein) HSP 1 Score: 58.9 bits (141), Expect = 7.6e-09 Identity = 50/213 (23.47%), Postives = 80/213 (37.56%), Query Frame = 0
BLAST of Carg24066 vs. Swiss-Prot
Match: sp|Q2KIY1|PXMP2_BOVIN (Peroxisomal membrane protein 2 OS=Bos taurus OX=9913 GN=PXMP2 PE=2 SV=3) HSP 1 Score: 90.9 bits (224), Expect = 3.2e-17 Identity = 48/176 (27.27%), Postives = 88/176 (50.00%), Query Frame = 0
BLAST of Carg24066 vs. Swiss-Prot
Match: sp|Q754F0|SYM1_ASHGO (Protein SYM1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=SYM1 PE=3 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 4.7e-16 Identity = 52/176 (29.55%), Postives = 84/176 (47.73%), Query Frame = 0
BLAST of Carg24066 vs. Swiss-Prot
Match: sp|Q9NR77|PXMP2_HUMAN (Peroxisomal membrane protein 2 OS=Homo sapiens OX=9606 GN=PXMP2 PE=1 SV=3) HSP 1 Score: 85.9 bits (211), Expect = 1.0e-15 Identity = 47/175 (26.86%), Postives = 87/175 (49.71%), Query Frame = 0
BLAST of Carg24066 vs. Swiss-Prot
Match: sp|P42925|PXMP2_MOUSE (Peroxisomal membrane protein 2 OS=Mus musculus OX=10090 GN=Pxmp2 PE=1 SV=2) HSP 1 Score: 84.7 bits (208), Expect = 2.3e-15 Identity = 48/174 (27.59%), Postives = 87/174 (50.00%), Query Frame = 0
BLAST of Carg24066 vs. Swiss-Prot
Match: sp|Q07066|PXMP2_RAT (Peroxisomal membrane protein 2 OS=Rattus norvegicus OX=10116 GN=Pxmp2 PE=1 SV=2) HSP 1 Score: 84.7 bits (208), Expect = 2.3e-15 Identity = 52/180 (28.89%), Postives = 90/180 (50.00%), Query Frame = 0
BLAST of Carg24066 vs. TrEMBL
Match: tr|A0A1S3BUA2|A0A1S3BUA2_CUCME (uncharacterized protein LOC103493348 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103493348 PE=4 SV=1) HSP 1 Score: 666.4 bits (1718), Expect = 3.8e-188 Identity = 332/375 (88.53%), Postives = 347/375 (92.53%), Query Frame = 0
BLAST of Carg24066 vs. TrEMBL
Match: tr|A0A1S3BUL8|A0A1S3BUL8_CUCME (uncharacterized protein LOC103493348 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103493348 PE=4 SV=1) HSP 1 Score: 666.4 bits (1718), Expect = 3.8e-188 Identity = 332/375 (88.53%), Postives = 347/375 (92.53%), Query Frame = 0
BLAST of Carg24066 vs. TrEMBL
Match: tr|A0A0A0L5A9|A0A0A0L5A9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G100790 PE=4 SV=1) HSP 1 Score: 622.5 bits (1604), Expect = 6.3e-175 Identity = 305/339 (89.97%), Postives = 318/339 (93.81%), Query Frame = 0
BLAST of Carg24066 vs. TrEMBL
Match: tr|W9QQ45|W9QQ45_9ROSA (Peroxisomal membrane protein 2 OS=Morus notabilis OX=981085 GN=L484_007929 PE=4 SV=1) HSP 1 Score: 529.3 bits (1362), Expect = 7.2e-147 Identity = 273/365 (74.79%), Postives = 294/365 (80.55%), Query Frame = 0
BLAST of Carg24066 vs. TrEMBL
Match: tr|M5WH84|M5WH84_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_4G187300 PE=4 SV=1) HSP 1 Score: 518.5 bits (1334), Expect = 1.3e-143 Identity = 272/380 (71.58%), Postives = 296/380 (77.89%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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