Carg24010 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg24010
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Structural molecule, putative
Location	Cucurbita_argyrosperma_scaffold_129 : 295536 .. 303878 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCTCTTTCGCTGCGCTCTTTGGCACTCAAAGAGAGAAGAAAATGGCAATGGCCTTATCCTCATCTACAATTACTCCGACCCTCAAACTGTCGCCTCCTCCAACATCCCAACCCGCCCGGCTTCTCCTTCGCATCCCCTCCAACACCAATTCCGCCGCCCCAACTTCGATCAATAAGCTCCTCACCGCTGCACCGTCCGACAAGTGGAGGCTCCGAATCTCTTTCTTTCCTGCCTTTTTGAAGAAGGGCAAAGATGTTGGTGCTCTTAAAGAGGAGCTTCTTGAGGCGATTGCGACCCTTGATCGAGGAGCTGAGGCCACCCCTGAAGACCAGGAAATGGTCGATCAGGTTTGGTATCGTTATCTCAGTTTTGAAGTTTTATTGTGCTGTAGTTTAAAATGGAAAATTTTCAATTTGAAGGAGGATTTATACGGAAAGGCCACTACAATGTGATAGACGATTTTATATGGCTAGAAGTAGGAGGGAACTAGAAGTTATACTTTAACTATATGTCCAAGGACCATGTTCAAATCTCTAAGAAGTTACATTTTTTGTGTGGCAAATTTTACATGAGAGTTTATACACTTTGGACGATGTTCAACGACATTCCTCTTTAGTGTGCATAGCGGTGTGTTCTTTGTTATGTTGTGGTGTTGGAGGTTGTAAGATCTCATGTCGGTTGGGGAGGAGAATGAAGCATTCTTTATAAAGGTGTGGAAACCTCTCCGTAGTAGATGCGTTTTAAAAACCTTGACGGGAAGCCTGAAAGGGAAAGCTTAAAGAGAAAAATATTTGCTAGCGGTGGGCTTGGGCTGTTACCGTTGGTATCAAAGCCGGACACTAGGCGATGTGCCAGTGAGGAGACTGAGTCCCGAAAAGGGGTAGACACGAAGTGGTGTGAAGGGGTGGACTCTGGGTCCTGAAGGGGTGGTTCCACATCGATTGAAGAAGGGAATGAGTGTCAGCGAGGACGCTGGGCACCGAAGGGGGTGAATTGTAAGATCCCACATTGGTTGGGGGAGAGGAACGAAACACCCATTATAAGGGTGTGGAAACATCTCCCTAATAGACGCATTTTAAAAACCTTGAGGAGAAGCCCGAAAGGAAAAACCCAAGCAGGACAATATCTGCTAGCGGTGGTTGTGAGATCTCACGTTAGTTGGAGAGGGGAACGCGACATTCTTTATAAGGTGTGAAAACCTTAGCCTAGCATACACGTTTTAAAAACTCTGAGGGGAAACCCAAAAGGGAAAGCCCAAAGAGAACAATATCCGGTAGCAGTGGGCTTGAGCTGTTACAACTGGTATTAGAACCAACTTCCTTGAGAATATGAGGTGATAGGAAGTAATGCTTTTGTCTTAGTTATGGAGGTTTAATTTGGTCATATGCTTCTATGGTGGATATTGGTACCGGAGGGAACATCTTAAGGCCCTTAGATTTGCTATGCATGATACACATTGTTGGTCAGAGCACAAAGCATACCATGAGAACAGGCATAACATGCTCTATTGAGGGTTACATCTTTGTGCGCTCTCTTGTTAGATTCTATATTTCTCTTTGGGTTTGAGTGTCGAGTCTTTTTTGTAACTACTCGCTAAGCCTTATTTTACTTGTTTAGAGTCCCTATGCATGTGTATTCTATCATGTTTTCTCTAGGAAAGGTCCGTTATTCATTAAAAAACTATATAATCTATTGAAAACGTATTGACTTGATTAAAGAAGATCTGGTTGATTGGCATGCTACTATACTGAGTTGAATGTGTTGAGTGTTACGGTCATGCTTGTCCAAGACGTGTTGCCTGTGGCTGTGTGTGAGATCCCACATCGGCTGGGGAGGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGTAGATGTGGTTTAAAAAACTTGAAGGGAAACTCGAAGGGGAAAGTCCAAAGAGGAAAATTTCTGCTAGCGGTGGGCTTGGGCCGTTATAAATGGTATCAGAGATAGATATCGGGCGATGTGCTAGCAAGGATATTGAACCCCGAAGGGGGGTGGACATGAGGCGGTGTGTCAGCAATGACGCTGGGCCCTAAAGGGGGGTGGATTGTGAGATCCCACATTGGTCGGGGAGGAGAACAAAACATTCTTGATAAGGGTGTGGAAACCTCTCCCTAGCAAACGCGTTTTAAAAACCTTTAGGGTAAGCCCAAAGGGGAAAGTCCAAAGAGGACAAATCTACTAGCGGTGGGCTTGGGCAATTACACCGTGTCGGATGTCCCGGTCATGTTTGTCCAAGACGTGTTGTCAATGATTGCACGCCTGTTCCAAACCCTTTTTACTTGTTTTCATGTTAATAGGCATTTACTATTCTTCTTGTGTTAATACGGGAGTGTATGACCGGTCACCAAAATCATATCTACACTTGACAGGGCTAAAATGCTCCAAAATGTACTATAGGAGAATGTGACTAGTAACCAATTTTTTCTACCTAAGTTACATGTCATCAAAGCTATGATTGTTGCTTATTTGATTTTAGTCTATAACATTGCTTTCTATTTTAAATTGTTTTTAACGCATTTCCTTTTTCACGTTTCCAAAATATTTCTCTTAAACGTGACTCGAGGCTCGAGCATACGCTAATATTATTCGTAATGTCTGAATCTCACACGCTGACTTGTTCAATGGGTTAGAATAAATGTCACACAATCGTTGTCCCTCTGCCACAAGAGTGTGATTGTAACAGAGTGCATGGTGCCCTACTAATTAGGAAAGATATAAAGGAAGGCTTCTTATTTGGATGACATCATTTCTATCTGTACCTTGAAGTCAACTTAACCATAAAAGTACCAAGTTGACCATAAAAGTACCATGTGGAAGTGGAAAGAAGACTTTTTTTATAGAATGGGCCACTAGTGTCACAATTGGACTCATGCGGCAACGGGACAACGATTGTGTGACACTTGTTCTAACCTAGTTAACAAGTTAGCCATGTGAAATTCGGATTTCGTGGACAATATTGGTATATGTTCGAGCCTCCAGTCACATTTGAGAGAAATGTTTTAGAAAAACGTGAGTGAAGAAATACATTGAAAACAATTTTACAGAAAACAATGTTATAGGCTAAAACCGAATAAGCAACAATAATGACTTTGATAGCATATAACCCGTGTAAGAATAATTGACAACTAGTCACATCCCCTATAGTACATTTTCGGGCAATTCAACCCTAGCGGATGCAAACATGATTTTGATGACCGGTCATATACCCCCGTATTCACACAACAAGAATAGTAAAGACCTATCTAACATGAAAACAAGTAAAAGGAGTTTGGAACGGGCATGCGGTCATGGACAACACGTCCTAGACAAGCATGATCAGGACATCCAACACACGTCCACAGACAACACGCCTTAGACAAGCATGACCGTGACAACTAACACCTTAGCTAAGATCTAGTAGATCATAATAGCATAGGTAATTAGCCTAAAATTCCAAATTTGAAGGCCTTTCCTTCTTTGAAATGAGCATTAAATTTCAACTTTATAAGTTATTGCATTGTGACCTCCCACATTGATTGGGGAGGTGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCCCTAGCAGACACGTTTTAAAGCCTTGAGTGGAAGCCCGAAAGGGAAAGCCCAAAGAGGATAATATCTGCTAGCGGTGGATCTGGCCGTTATAAATGGTATCAGAGCCAAACACCAGACGATGTGTCAGCCTTCTCACTGTTCCCCAAAGGGGGTAGACACGAGGCGGTGTGCCAGTAAGGACGCTGGGCCCTAAAGGGGGTGGATATGGGGGCAGTCCCACATCGATTGGAGGAAGGAAAGAGTGCCAACGAGGACACTGGGCCCCGAAGGGGGGTGGATTGTGATGTCTCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTTCCCTAGTAGACACATTTTAAAGCCTTGAGTGGAAGCCCGAAAGGGAAAGCCGTTACATGCATGGTCAATTTTCTATTTATATTCGCTTTTAATTAATCATAGCATAATTTTTCATCTCATTTTGATATATTTAAACCAACAGATATCACGTAAGCTTGAAGCAGTTAACCCAACAAAGGAACCACTCAAATCTGATTTACTAAATGGGAAATGGGAGCTCATATATACCACATCAACATCAATTCTGCAAACTGAGGTAGCTGGATACTTCATTATGACATGCTTCCTCACAACTATTTATGCTGTTTTTCTATCTCTCTGGTTGACATGAAGAATTTTGATTGATATTAAGATCTTTTATCAGCTGTTATTGATAAGACACCATCTTTAGTTAAGGAAAATGTGATAACATAAGTAAGGCCATCAAAAAATACTTGCCTAAAACAAGGAAAGGAGTTAGAATTATAAAAAAACGCTCAACAAAATGTGGGAGTGGGGATTAAAACCTTTGACCGATATAATGCCTGTTGAGGATTGTTGGGAGAGGAGTCCCACGTCGACTAGTTAAGGGGTTGATCATGGTTTTATAAGTAAGGAATACATCTCTATTGGTATGAAGTCTTTTGAGGAAACCAAAAGCAAAGCCACGAGAGCGTATACTCAAAGTGGACAATATCATATCATTGTGGAGATTCGTGATTTCTAACATGGTATTAGAGCCATGCCCTTAACTTAGTCATGTCAATAGAATTCTCAAATTTCGAACAAATAAGTTGTGAGCCTCGAAGGTGTAGTCAAAAGTGACTCAAGAGTCGAACAAAGGGTGTACTTTGTTCGAGGGCTCCAAAGAAGGAGTTGAGCCTCAATTAAGGGGAGGTTGTTCGAGGGCTCCATAGGCCTTAGAGGAGGCTCTATGGTGTACTTTGTTCGAGGGGAGGATTGTTGAGCATTGTTGGGAGAGGAGTCCCACATCGGCTAATTAAGGGGTTGATCATGGTTTTATAAGTAAGGAATACATCTCCAATGGTATGAGGTCTTTTGGGGAAACCAAAAGCAAAACGATGAGAACTTATGCTCAAAGTGGACAATATCATACCATTTTGGAGATTCGTGATTTCTAACTTGGTACCAGAGTCATGCCCTTAACTTACTCATGTCAATAAAATCCTCAATTGTCGAACAAATAAGCTGTGAGCCTCAAAGGTGTAGTCAAAAGTGACTCAAGTGTCGAACAAAGGGTGTACTTTGTTTGAGAGCTCCAAAAAAGGAGTCGAGCCTCGATTAAGGGGAGGCTGTTTGAGGGCTCCATAGGCCTTAGAGGAGGCTTTATGGTGTACTTTGTTCGAGGGGAGGATTGTTGAGGATTGTCGAGAGAGGAGTCCCATATCGGCTAATTATCATATATCTAATTCTGTGCTTTTCGATTTTGATTTCAATTTCCGAGTAAACAACATCAAAAGGAATAATATTCCGATTTTCATTTCATTCTGATTGATTCTTATTCTGAACAGTCATATTTTTATATTTTGATAGAGGCCCAAGTTGTTAAGATCAAGAACAAACTATCAAGGAATCAATGTAGATACACTAAGAGCTCAAAATATGGAATCTTGGCCATTCTTCAACCAGGTATAACTTACTGTTCTTCATTGTATTTGTTTTTAATGAGATATTACTCAATCTCTCTCTTTTACTTCCTAATTATACTCGTCTGTCAATGGATCATATTTTTACATAATGTAACTTCTGCCTTTGCAATTCATAGTTTGAAGACTGTGGTAAAAAAGTACATCTGTAAAGTTTACTATAGTAGCTAATAAGCTTTATCCTTGTCCAGTAAATTTTTTGTTACTGTTGGCGACGTAGAAGCAACCATAGGAAGCTTTATAAAGGTGTGGAAACCTCTCCTTAGCAGACGGGTTTTAAAAATCTTGAGAGAAACCCCAAAAGGAAAAGTCCAAAGAGGACAATATTTGCTAGTGGTGGGTTTGGGATGTTATGAATGGTATCAGAGCCAGACATCGGGCGATGTGCCAACGAGAAGGTTGAGCCTCAAAGGGTGTGGACACGAGGCGGTGTACCAGTAAGGATGTTGGCCCCAAAGGGAGGTGGATTGGGAGGGTCCCACGTCGATTAGAGAAGGCTGAGCCTCTTTGGGCTTTCCCTTATGGACTTCCCCTCAAGGTTTTTAAAACGTGTCTGCTAAGGAGAGGTTTTCACACCCTTATAAAGAATGTTTTCGTTCTCGTCCCCAACAGATGTGGGATCTCACAATCCACTCCCCTTCGGAGCCAAGCATTCTCGCTGGCACTTGTTCCCTTCTCCAATCGATGTGGGACCCCCTAGTCCACCTCCCTTCGGGGCCTAACGTCCTTGCTAACACACCGCCTTGTATCCATCCCCCTTCGGGGTCAGTCTCCTCACTGGCACATCGCCCAATGTCTAGCTCTAATATCATTTGTAACGGCCCAAACCCACCATTTGCAGATATTGCCCTCTTTGGGCTTTCCTCTCAAGGCTTTTAAAACGTGTCTGCTAGGAAGAGGTTTCAACACCCTTATAAAGAATGTTTCGTTCTCCTCTCCAACCAATGTGAGATCTCACGCTCTGGTTTCTCTTGTTCCACAACTTCCGTAGAGATACCATAATGGAGTTTAACCACGTAATTCTAGCCTTATTCTTGAAAGGAGATCCCAGAAATCAACCGGAAAAGAGACTCGACTTACGAGTACGAGCTGTCTAGAACCCACCTTATAATTTAGGGGTTGTTTAATCGTTGAGATAAAAGAATCTAACAATGTATCATAGAAATGCTTATCTATTTTTTCTCAATGAGATGATGTATTCACGTTCTTGTCCTTTTTGTAGGTCACAGCCAACTTGAAGCCTTTAAACACAACAAAAGTAGCTGTTCAATTTGACACTTTCAAAATTCTTGGTCTGGTAAGTCATCTGGTTTCTTTGATTATTACATATCTATCAAACTATATTGTGCTTGCATTTCTCGAACTCCGAGACTCGTTTTCTTGAAATAAAAGGAATGATAATTACTATGAGATCCTACGTCGGTTGGGGAGGAAAACAAAGCATGCTTTATAAGAGTGTGGAAACCTCTCCTAGCATATGCATTTTAAGCCCAAAGAGGACAATATCTGCAAACGGTGATTGGGCCGTTACAAATGGTATCTCAGAGCTAGACACAGGATGATGTGCTAGCGAGGCAGCTGAACTCCGGGTCCCATATCGATTGGAGAATGGAACGAGTGTTAGTGAGAACGCTGGGCACCTAAGGGAGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGAGAACGAAACATTTTTTTTTATAAGAGTGTGGAAACCTCTCTCCTAGCAGATGCGTTTTAAAAACCTTGAGGGGAAGCTCAAAGAGGACAATATCGGTAAGTTGTGGGCTTGGACCGTTACAATTACATTAGTGGATAGTGTGAATGTCTTTTTTATAGGACTTACGACCTTGGATAGAAAGAATAGAACTCCTTCGGGTTTTGTCTTTTTCTTTTTTCTTTTTGAGATTTCATTGAAAGAAATGAAAGAATACGAGAGCATACGAGAAATACGCCCGAACAAAAGAAGCTCAAAAACAAATTACATAAAGGGACTCCAATCCAAGGGTACAAGACCAAGATCATAACACGTAGCTTAAACGACAAAGTAAGTCGAGGCACATCGTTAACTAGCTGTGGCGGAATGGAATCATGTTCTTAGCTAAGCGCTATCATACAACATTACAATAAATGTCTCACAATCATTCATCTGTTGTAATTTTTGTTCGTGTCTTGAACAACAGATACCAGTTAAAGCGCCAGGAAGAGCACGTGGTGAACTGGAAATCACATATTTAGATGAAGAGTTGCGGTAAGTTATCGTGCTAATTTTTTCTTATCGTTTTCTAGTTTCTTCTAGACACGGGATTGAGGGTCAATTCAGAATAACTTTTGGAAGGACGAAACACGTGACAAAATTTTCGTAATCAAACTTAGCATTTGGTTGAGATTACTTTTATTCATGCATCATCACCATAACGTTATTAAACTTTTTTCCATTCAATATTACGTGGAGTTGGGAATTTGAACCTCTAACATCTTGGTCGAGAATATGTCTTAACGTATTGAACACTTGAACTATAGGTTGGTGGTGTTATTAAACTGTTATATCATTGTATTTTGACAGAATATCTCGAGGTGACAAAGGGAACCTCTTTATCTTGAAGATGATCGACCCTTCTTATCGGGTACCAGTATAACATTAATCTCTTTACTATTATCTTATAATATGTATATTTATTATATACCAAATTATACCGTAAGAATCTCTCCTAAGTGTAATCTAGAAATAATCACAGAGCTTATTCTA

mRNA sequence

ATTCTCTTTCGCTGCGCTCTTTGGCACTCAAAGAGAGAAGAAAATGGCAATGGCCTTATCCTCATCTACAATTACTCCGACCCTCAAACTGTCGCCTCCTCCAACATCCCAACCCGCCCGGCTTCTCCTTCGCATCCCCTCCAACACCAATTCCGCCGCCCCAACTTCGATCAATAAGCTCCTCACCGCTGCACCGTCCGACAAGTGGAGGCTCCGAATCTCTTTCTTTCCTGCCTTTTTGAAGAAGGGCAAAGATGTTGGTGCTCTTAAAGAGGAGCTTCTTGAGGCGATTGCGACCCTTGATCGAGGAGCTGAGGCCACCCCTGAAGACCAGGAAATGGTCGATCAGATATCACGTAAGCTTGAAGCAGTTAACCCAACAAAGGAACCACTCAAATCTGATTTACTAAATGGGAAATGGGAGCTCATATATACCACATCAACATCAATTCTGCAAACTGAGAGGCCCAAGTTGTTAAGATCAAGAACAAACTATCAAGGAATCAATGTAGATACACTAAGAGCTCAAAATATGGAATCTTGGCCATTCTTCAACCAGGTCACAGCCAACTTGAAGCCTTTAAACACAACAAAAGTAGCTGTTCAATTTGACACTTTCAAAATTCTTGGTCTGATACCAGTTAAAGCGCCAGGAAGAGCACGTGGTGAACTGGAAATCACATATTTAGATGAAGAGTTGCGAATATCTCGAGGTGACAAAGGGAACCTCTTTATCTTGAAGATGATCGACCCTTCTTATCGGGTACCAGTATAACATTAATCTCTTTACTATTATCTTATAATATGTATATTTATTATATACCAAATTATACCGTAAGAATCTCTCCTAAGTGTAATCTAGAAATAATCACAGAGCTTATTCTA

Coding sequence (CDS)

ATGGCAATGGCCTTATCCTCATCTACAATTACTCCGACCCTCAAACTGTCGCCTCCTCCAACATCCCAACCCGCCCGGCTTCTCCTTCGCATCCCCTCCAACACCAATTCCGCCGCCCCAACTTCGATCAATAAGCTCCTCACCGCTGCACCGTCCGACAAGTGGAGGCTCCGAATCTCTTTCTTTCCTGCCTTTTTGAAGAAGGGCAAAGATGTTGGTGCTCTTAAAGAGGAGCTTCTTGAGGCGATTGCGACCCTTGATCGAGGAGCTGAGGCCACCCCTGAAGACCAGGAAATGGTCGATCAGATATCACGTAAGCTTGAAGCAGTTAACCCAACAAAGGAACCACTCAAATCTGATTTACTAAATGGGAAATGGGAGCTCATATATACCACATCAACATCAATTCTGCAAACTGAGAGGCCCAAGTTGTTAAGATCAAGAACAAACTATCAAGGAATCAATGTAGATACACTAAGAGCTCAAAATATGGAATCTTGGCCATTCTTCAACCAGGTCACAGCCAACTTGAAGCCTTTAAACACAACAAAAGTAGCTGTTCAATTTGACACTTTCAAAATTCTTGGTCTGATACCAGTTAAAGCGCCAGGAAGAGCACGTGGTGAACTGGAAATCACATATTTAGATGAAGAGTTGCGAATATCTCGAGGTGACAAAGGGAACCTCTTTATCTTGAAGATGATCGACCCTTCTTATCGGGTACCAGTATAA

Protein sequence

MAMALSSSTITPTLKLSPPPTSQPARLLLRIPSNTNSAAPTSINKLLTAAPSDKWRLRISFFPAFLKKGKDVGALKEELLEAIATLDRGAEATPEDQEMVDQISRKLEAVNPTKEPLKSDLLNGKWELIYTTSTSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLKPLNTTKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYRVPV

Homology

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BLAST of Carg24010 vs. NCBI nr
Match: XP_023532027.1 (probable plastid-lipid-associated protein 4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 460.3 bits (1183), Expect = 4.1e-126
Identity = 239/243 (98.35%), Postives = 239/243 (98.35%), Query Frame = 0


Query: 1   MAMALSSSTITPTLKLSPPPTSQPARLLLRIPSNTNSAAPTSINKLLTAAPSDKWRLRIS 60
           MAMALSSSTITPTLKLSPPPTSQ ARLLLRIPSN NSAAPTSINKLLTAAPSDKWRLRIS
Sbjct: 1   MAMALSSSTITPTLKLSPPPTSQSARLLLRIPSNPNSAAPTSINKLLTAAPSDKWRLRIS 60

Query: 61  FFPAFLKKGKDVGALKEELLEAIATLDRGAEATPEDQEMVDQISRKLEAVNPTKEPLKSD 120
           FFPAFLKKGKDVGALKEELLEAIA LDRGAEATPEDQEMVDQISRKLEAVNPTKEPLKSD
Sbjct: 61  FFPAFLKKGKDVGALKEELLEAIAPLDRGAEATPEDQEMVDQISRKLEAVNPTKEPLKSD 120

Query: 121 LLNGKWELIYTTSTSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLKPL 180
           LLNGKWELIYTTSTSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLKPL
Sbjct: 121 LLNGKWELIYTTSTSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLKPL 180

Query: 181 NTTKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYR 240
           NT KVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYR
Sbjct: 181 NTRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYR 240

Query: 241 VPV 244
           VPV
Sbjct: 241 VPV 243

[Close]

BLAST of Carg24010 vs. NCBI nr
Match: XP_022989717.1 (probable plastid-lipid-associated protein 4, chloroplastic [Cucurbita maxima])

HSP 1 Score: 459.9 bits (1182), Expect = 5.3e-126
Identity = 237/243 (97.53%), Postives = 238/243 (97.94%), Query Frame = 0


Query: 1   MAMALSSSTITPTLKLSPPPTSQPARLLLRIPSNTNSAAPTSINKLLTAAPSDKWRLRIS 60
           MAMALSSSTITPTLKLSPPP SQPARLLLRIPSNTNS APTSINKLLT APSDKWRLRIS
Sbjct: 1   MAMALSSSTITPTLKLSPPPKSQPARLLLRIPSNTNSTAPTSINKLLTVAPSDKWRLRIS 60

Query: 61  FFPAFLKKGKDVGALKEELLEAIATLDRGAEATPEDQEMVDQISRKLEAVNPTKEPLKSD 120
           FFPAFLKKGKDVGALKEELLEAIA LDRGAEATPEDQEMVDQISRKLEAVNP KEPLKSD
Sbjct: 61  FFPAFLKKGKDVGALKEELLEAIAPLDRGAEATPEDQEMVDQISRKLEAVNPMKEPLKSD 120

Query: 121 LLNGKWELIYTTSTSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLKPL 180
           LLNGKWELIYTTSTSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLKPL
Sbjct: 121 LLNGKWELIYTTSTSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLKPL 180

Query: 181 NTTKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYR 240
           NTTKVAVQFDTFKILGLIP+KAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYR
Sbjct: 181 NTTKVAVQFDTFKILGLIPIKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYR 240

Query: 241 VPV 244
           VPV
Sbjct: 241 VPV 243

[Close]

BLAST of Carg24010 vs. NCBI nr
Match: XP_022927890.1 (probable plastid-lipid-associated protein 4, chloroplastic [Cucurbita moschata] >XP_022927891.1 probable plastid-lipid-associated protein 4, chloroplastic [Cucurbita moschata])

HSP 1 Score: 458.0 bits (1177), Expect = 2.0e-125
Identity = 237/243 (97.53%), Postives = 238/243 (97.94%), Query Frame = 0


Query: 1   MAMALSSSTITPTLKLSPPPTSQPARLLLRIPSNTNSAAPTSINKLLTAAPSDKWRLRIS 60
           MAMALSSSTITPTLKLSPPPTSQPARLLLRIPSNTNSAAPTSINKLLTAAPSDKWRLRIS
Sbjct: 1   MAMALSSSTITPTLKLSPPPTSQPARLLLRIPSNTNSAAPTSINKLLTAAPSDKWRLRIS 60

Query: 61  FFPAFLKKGKDVGALKEELLEAIATLDRGAEATPEDQEMVDQISRKLEAVNPTKEPLKSD 120
           FFPAFLKKGKDVGALKEELLEAIA LDRGAEATPEDQEMVDQI+RKLEAVNP KEPLKSD
Sbjct: 61  FFPAFLKKGKDVGALKEELLEAIAPLDRGAEATPEDQEMVDQIARKLEAVNPIKEPLKSD 120

Query: 121 LLNGKWELIYTTSTSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLKPL 180
           LLNGKWELIYTTS SILQTERPKLLRSRTNYQGIN DTLRAQNMESWPFFNQVTANLKPL
Sbjct: 121 LLNGKWELIYTTSRSILQTERPKLLRSRTNYQGINADTLRAQNMESWPFFNQVTANLKPL 180

Query: 181 NTTKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYR 240
           NTTKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKM DPSYR
Sbjct: 181 NTTKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMNDPSYR 240

Query: 241 VPV 244
           VPV
Sbjct: 241 VPV 243

[Close]

BLAST of Carg24010 vs. NCBI nr
Match: XP_022156963.1 (probable plastid-lipid-associated protein 4, chloroplastic [Momordica charantia])

HSP 1 Score: 389.4 bits (999), Expect = 8.8e-105
Identity = 207/243 (85.19%), Postives = 218/243 (89.71%), Query Frame = 0


Query: 1   MAMALSSSTITPTLKLSPPPTSQPARLLLRIPSNTNSAAPTSINKLLTAAPSDKWRLRIS 60
           MAM LSS ++TP LKLSPP TSQP R LLR+PSN  + APTS+   LT+APS KWR+RIS
Sbjct: 1   MAMPLSSPSVTPALKLSPPLTSQPPR-LLRLPSNPTTTAPTSV---LTSAPSAKWRVRIS 60

Query: 61  FFPAFLKKGKDVGALKEELLEAIATLDRGAEATPEDQEMVDQISRKLEAVNPTKEPLKSD 120
           FFPAFL K KDV ALK+ELLEAIA LDRGAEATPED+EMV+QIS KLEA NP KEPLKS+
Sbjct: 61  FFPAFLNKRKDVSALKQELLEAIAPLDRGAEATPEDREMVNQISCKLEAANPVKEPLKSN 120

Query: 121 LLNGKWELIYTTSTSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLKPL 180
           LLNGKWELIYTTS SILQTERPK LRSRTNYQGINVDTLRAQNMES PFFNQVTANL PL
Sbjct: 121 LLNGKWELIYTTSRSILQTERPKFLRSRTNYQGINVDTLRAQNMESGPFFNQVTANLMPL 180

Query: 181 NTTKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYR 240
           NT KVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYR
Sbjct: 181 NTRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPSYR 239

Query: 241 VPV 244
           VPV
Sbjct: 241 VPV 239

[Close]

BLAST of Carg24010 vs. NCBI nr
Match: XP_011660249.1 (PREDICTED: probable plastid-lipid-associated protein 4, chloroplastic isoform X1 [Cucumis sativus] >KGN66726.1 hypothetical protein Csa_1G665380 [Cucumis sativus])

HSP 1 Score: 387.1 bits (993), Expect = 4.4e-104
Identity = 208/246 (84.55%), Postives = 219/246 (89.02%), Query Frame = 0


Query: 1   MAMALSSSTITPTLKLSPPPTSQPARLLLR-IPSNTNSAAPTSINKLLTAAPSDKWRLRI 60
           MA+ALSSST TPT KL PP TSQP R LL  IPSN     P+S   LLT++PS KWRLRI
Sbjct: 3   MAVALSSSTATPTTKLWPPSTSQPPRFLLPIIPSN-----PSSNTNLLTSSPSHKWRLRI 62

Query: 61  SFFPAFLKKGK--DVGALKEELLEAIATLDRGAEATPEDQEMVDQISRKLEAVNPTKEPL 120
           SFFPAFL KGK  +V ALK+ELL+AI  LDRGAEATPEDQEMVDQISRKLEAVNPTKEPL
Sbjct: 63  SFFPAFLNKGKGNNVTALKQELLQAIEPLDRGAEATPEDQEMVDQISRKLEAVNPTKEPL 122

Query: 121 KSDLLNGKWELIYTTSTSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANL 180
           KSDLLNGKWELIYTTS SILQTERPK LRS+ NYQGINVD+LRAQNMESWPFFNQVTA+L
Sbjct: 123 KSDLLNGKWELIYTTSRSILQTERPKFLRSKLNYQGINVDSLRAQNMESWPFFNQVTADL 182

Query: 181 KPLNTTKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDP 240
           KPLN+ KVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDP
Sbjct: 183 KPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDP 242

Query: 241 SYRVPV 244
           SYRVPV
Sbjct: 243 SYRVPV 243

[Close]

BLAST of Carg24010 vs. TAIR10
Match: AT3G26070.1 (Plastid-lipid associated protein PAP / fibrillin family protein)

HSP 1 Score: 266.5 bits (680), Expect = 1.6e-71
Identity = 148/248 (59.68%), Postives = 184/248 (74.19%), Query Frame = 0


Query: 3   MALSSSTITPTLKLSPPPTSQPARLLLRIPSNTNSAAPTSINKLLTAAPSDKWRLRI--- 62
           MAL S   T  L +SP      +  L++  S++  A PT   KL +    D+ RLR+   
Sbjct: 1   MALPSCLKTGAL-MSPATGFNFSGSLMK--SDSGFAVPT---KLQSTRKGDRERLRVQAI 60

Query: 63  -SFFPAFLK---KGKDVGALKEELLEAIATLDRGAEATPEDQEMVDQISRKLEAVNPTKE 122
            SF PAFL    + +    LK+ELLEAI  L+RGA A+P+DQ  +DQ++RK+EAVNPTKE
Sbjct: 61  FSFPPAFLTRNGRAEKQKQLKQELLEAIEPLERGATASPDDQLRIDQLARKVEAVNPTKE 120

Query: 123 PLKSDLLNGKWELIYTTSTSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTA 182
           PLKSDL+NGKWELIYTTS SILQ ++P+ LRS TNYQ INVDTL+ QNME+WPF+N VT 
Sbjct: 121 PLKSDLVNGKWELIYTTSASILQAKKPRFLRSITNYQSINVDTLKVQNMETWPFYNSVTG 180

Query: 183 NLKPLNTTKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMI 242
           ++KPLN+ KVAV+   FKILG IP+KAP  ARGELEITY+DEELR+SRGDKGNLFILKM 
Sbjct: 181 DIKPLNSKKVAVKLQVFKILGFIPIKAPDSARGELEITYVDEELRLSRGDKGNLFILKMF 240

Query: 243 DPSYRVPV 244
           DP+YR+P+
Sbjct: 241 DPTYRIPL 242

[Close]

BLAST of Carg24010 vs. TAIR10
Match: AT3G26080.1 (plastid-lipid associated protein PAP / fibrillin family protein)

HSP 1 Score: 248.4 bits (633), Expect = 4.4e-66
Identity = 132/216 (61.11%), Postives = 162/216 (75.00%), Query Frame = 0


Query: 32  PSNTNSAAPTSINKLLTAAPSDKWRLRIS---FFPAFLKKGKDVGALKEELLEAIATLDR 91
           PS++  A PT   KLL+    D+ RLRI     FP      +    LK EL+EAI  L+R
Sbjct: 22  PSDSGFAVPT---KLLSIRKGDRERLRIQAVFSFPPRNGGAEKRKQLKHELVEAIEPLER 81

Query: 92  GAEATPEDQEMVDQISRKLEAVNPTKEPLKSDLLNGKWELIYTTSTSILQTERPKLLRSR 151
           GA A+P+DQ ++DQ++RK+EAVNPTKEPLKSDL+NGKWELIYTTS +ILQ ++P+ LRS 
Sbjct: 82  GATASPDDQLLIDQLARKVEAVNPTKEPLKSDLINGKWELIYTTSAAILQAKKPRFLRSL 141

Query: 152 TNYQGINVDTLRAQNMESWPFFNQVTANLKPLNTTKVAVQFDTFKILGLIPVKAP-GRAR 211
           TNYQ IN+DTL+ Q ME+WPF+N VT +L PLN+  VAV+   FKILG IPVKAP G AR
Sbjct: 142 TNYQCINMDTLKVQRMETWPFYNSVTGDLTPLNSKTVAVKLQVFKILGFIPVKAPDGTAR 201

Query: 212 GELEITYLDEELRISRGDKGNLFILKMIDPSYRVPV 244
           GELEITY+DEELRISRG    LFILKM DP+YR+P+
Sbjct: 202 GELEITYVDEELRISRGKGNLLFILKMFDPTYRIPL 234

[Close]

BLAST of Carg24010 vs. TAIR10
Match: AT5G09820.2 (Plastid-lipid associated protein PAP / fibrillin family protein)

HSP 1 Score: 64.7 bits (156), Expect = 9.0e-11
Identity = 55/190 (28.95%), Postives = 91/190 (47.89%), Query Frame = 0


Query: 72  VGALKEELLEAIATLDRGAEATPEDQEM-VDQISRKLEAVNPTKEPL-KSDLLNGKWELI 131
           V  +KEEL EA+  ++RG      D++  ++ + + LE  NPT EP  + D + G W+LI
Sbjct: 83  VSHIKEELYEALKGINRGIFGVKSDKKTEIEGLVKLLECRNPTPEPTGELDKIGGCWKLI 142

Query: 132 YTTSTSILQTERPK-----------LLRSRTNYQGINVDTL----RAQNMESWPFFNQVT 191
           Y+T T +L ++R K           LL+     QG  V  L    R  N+    F    +
Sbjct: 143 YSTIT-VLGSKRTKLGLRDFVSLGDLLQQIDIAQGKTVHVLKFDVRGLNLLDGEFRIVAS 202

Query: 192 ANLKPLNTTKVAVQFDTFKILGLIPVKAPG--------RARGELEITYLDEELRISRGDK 237
             +   ++ ++  +  T K   L+ +               G  EI+YLDE+L++ R  K
Sbjct: 203 FKISSKSSVEITYESSTIKPDQLMNIFRKNMDLLLGIFNPEGLFEISYLDEDLQVGRDGK 262

[Close]

BLAST of Carg24010 vs. TAIR10
Match: AT3G23400.1 (Plastid-lipid associated protein PAP / fibrillin family protein)

HSP 1 Score: 57.8 bits (138), Expect = 1.1e-08
Identity = 69/252 (27.38%), Postives = 109/252 (43.25%), Query Frame = 0


Query: 17  SPPPTSQPARLLLRIPSNTNSAAPTSINKLLTAAPSDKWRLRISFFPAFLKKGKDVGALK 76
           SP  T + +RL   +P   N AA +S+ ++                    +    +  LK
Sbjct: 33  SPLTTPKSSRLGFTVPEKRNLAANSSLVEVSIGGEXXXXXXXXXXXXXXXQ----IALLK 92

Query: 77  EELLEAIATLDRGAEATPEDQEMVDQISRKLE-AVNPTKEPLKSDLLNGKWELIYTT--S 136
            +LL  ++ L+RG  A+ +D E  +  +++LE A  P       D L GKW L+Y++  S
Sbjct: 93  LKLLSVVSGLNRGLVASVDDLERAEVAAKELETAGGPVDLTDDLDKLQGKWRLLYSSAFS 152

Query: 137 TSILQTERPKLLRSR-------TNYQGINVDTLRAQNMES------WPFFN-QVTANL-- 196
           +  L   RP L   R         +Q I+V +    N+        WPF   + TA L  
Sbjct: 153 SRSLGGSRPGLPTGRLIPVTLGQVFQRIDVFSKDFDNIAEVELGAPWPFPPLEATATLAH 212

Query: 197 --KPLNTTKVAVQFD--TFKILGLI----------------PVKAPGRARGELEITYLDE 230
             + L T K+ + F+  T K  G +                P   PG   G+ E+TY+D+
Sbjct: 213 KFELLGTCKIKITFEKTTVKTSGNLSQIPPFDIPRLPDSFRPSSNPG--TGDFEVTYVDD 272

[Close]

BLAST of Carg24010 vs. TAIR10
Match: AT5G19940.1 (Plastid-lipid associated protein PAP / fibrillin family protein)

HSP 1 Score: 56.2 bits (134), Expect = 3.2e-08
Identity = 68/245 (27.76%), Postives = 121/245 (49.39%), Query Frame = 0


Query: 3   MALSSSTITPTLKLSPPPTSQPARLLLRIPSNTNSAAPTSINKLLTAAPSDKWRLRISFF 62
           MA ++S++T     S P T   +   L +P         SI   +  + S +  L +S  
Sbjct: 1   MAATASSLTIASSFSEPRTQIHSSRRLNLP------LQYSIPYKVLRSRSRRLGLVVSSV 60

Query: 63  PA---FLKKGKDVGALKEELLEAIATLDRGAEATPEDQEMVDQISRKLEAVNPTKEPLKS 122
            A    L+ G D   L   LL  +A  D G   +PE  + V Q++ +L+     KEP+K+
Sbjct: 61  SAPNVELRTGPD--DLISTLLSKVANSDGGVTLSPEQHKEVAQVAGELQKY-CVKEPVKN 120

Query: 123 DLLNGKWELIY----TTSTSILQTERPKL-LRSRTNYQGINV-DTLRAQ-NMESWPFFN- 182
            L+ G WE++Y    T+     ++   +L  +++   Q I+  D +R + ++ ++ F + 
Sbjct: 121 PLIFGDWEVVYCSRPTSPGGGYRSVIGRLFFKTKEMIQAIDAPDIVRNKVSINAFGFLDG 180

Query: 183 --QVTANLKPLNTTKVAVQFDTFKI-LGLIPVKAPGRARGELEITYLDEELRISRGDKGN 234
              +T  LK L++  V V F+  +I +G +  K    +  +L ITY+DE+LR+  G KG+
Sbjct: 181 DVSLTGKLKALDSEWVQVIFEPPEIKVGSLEFKYGFESEVKLRITYVDEKLRLGLGSKGS 236

[Close]

BLAST of Carg24010 vs. Swiss-Prot
Match: sp|Q9LU85|PAP4_ARATH (Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP4 PE=1 SV=1)

HSP 1 Score: 266.5 bits (680), Expect = 2.8e-70
Identity = 148/248 (59.68%), Postives = 184/248 (74.19%), Query Frame = 0


Query: 3   MALSSSTITPTLKLSPPPTSQPARLLLRIPSNTNSAAPTSINKLLTAAPSDKWRLRI--- 62
           MAL S   T  L +SP      +  L++  S++  A PT   KL +    D+ RLR+   
Sbjct: 1   MALPSCLKTGAL-MSPATGFNFSGSLMK--SDSGFAVPT---KLQSTRKGDRERLRVQAI 60

Query: 63  -SFFPAFLK---KGKDVGALKEELLEAIATLDRGAEATPEDQEMVDQISRKLEAVNPTKE 122
            SF PAFL    + +    LK+ELLEAI  L+RGA A+P+DQ  +DQ++RK+EAVNPTKE
Sbjct: 61  FSFPPAFLTRNGRAEKQKQLKQELLEAIEPLERGATASPDDQLRIDQLARKVEAVNPTKE 120

Query: 123 PLKSDLLNGKWELIYTTSTSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTA 182
           PLKSDL+NGKWELIYTTS SILQ ++P+ LRS TNYQ INVDTL+ QNME+WPF+N VT 
Sbjct: 121 PLKSDLVNGKWELIYTTSASILQAKKPRFLRSITNYQSINVDTLKVQNMETWPFYNSVTG 180

Query: 183 NLKPLNTTKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMI 242
           ++KPLN+ KVAV+   FKILG IP+KAP  ARGELEITY+DEELR+SRGDKGNLFILKM 
Sbjct: 181 DIKPLNSKKVAVKLQVFKILGFIPIKAPDSARGELEITYVDEELRLSRGDKGNLFILKMF 240

Query: 243 DPSYRVPV 244
           DP+YR+P+
Sbjct: 241 DPTYRIPL 242

[Close]

BLAST of Carg24010 vs. Swiss-Prot
Match: sp|Q6DBN2|PAP5_ARATH (Probable plastid-lipid-associated protein 5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP5 PE=2 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 7.9e-65
Identity = 132/216 (61.11%), Postives = 162/216 (75.00%), Query Frame = 0


Query: 32  PSNTNSAAPTSINKLLTAAPSDKWRLRIS---FFPAFLKKGKDVGALKEELLEAIATLDR 91
           PS++  A PT   KLL+    D+ RLRI     FP      +    LK EL+EAI  L+R
Sbjct: 22  PSDSGFAVPT---KLLSIRKGDRERLRIQAVFSFPPRNGGAEKRKQLKHELVEAIEPLER 81

Query: 92  GAEATPEDQEMVDQISRKLEAVNPTKEPLKSDLLNGKWELIYTTSTSILQTERPKLLRSR 151
           GA A+P+DQ ++DQ++RK+EAVNPTKEPLKSDL+NGKWELIYTTS +ILQ ++P+ LRS 
Sbjct: 82  GATASPDDQLLIDQLARKVEAVNPTKEPLKSDLINGKWELIYTTSAAILQAKKPRFLRSL 141

Query: 152 TNYQGINVDTLRAQNMESWPFFNQVTANLKPLNTTKVAVQFDTFKILGLIPVKAP-GRAR 211
           TNYQ IN+DTL+ Q ME+WPF+N VT +L PLN+  VAV+   FKILG IPVKAP G AR
Sbjct: 142 TNYQCINMDTLKVQRMETWPFYNSVTGDLTPLNSKTVAVKLQVFKILGFIPVKAPDGTAR 201

Query: 212 GELEITYLDEELRISRGDKGNLFILKMIDPSYRVPV 244
           GELEITY+DEELRISRG    LFILKM DP+YR+P+
Sbjct: 202 GELEITYVDEELRISRGKGNLLFILKMFDPTYRIPL 234

[Close]

BLAST of Carg24010 vs. Swiss-Prot
Match: sp|Q5M755|PAP7_ARATH (Probable plastid-lipid-associated protein 7, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP7 PE=2 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.6e-09
Identity = 55/190 (28.95%), Postives = 91/190 (47.89%), Query Frame = 0


Query: 72  VGALKEELLEAIATLDRGAEATPEDQEM-VDQISRKLEAVNPTKEPL-KSDLLNGKWELI 131
           V  +KEEL EA+  ++RG      D++  ++ + + LE  NPT EP  + D + G W+LI
Sbjct: 83  VSHIKEELYEALKGINRGIFGVKSDKKTEIEGLVKLLECRNPTPEPTGELDKIGGCWKLI 142

Query: 132 YTTSTSILQTERPK-----------LLRSRTNYQGINVDTL----RAQNMESWPFFNQVT 191
           Y+T T +L ++R K           LL+     QG  V  L    R  N+    F    +
Sbjct: 143 YSTIT-VLGSKRTKLGLRDFVSLGDLLQQIDIAQGKTVHVLKFDVRGLNLLDGEFRIVAS 202

Query: 192 ANLKPLNTTKVAVQFDTFKILGLIPVKAPG--------RARGELEITYLDEELRISRGDK 237
             +   ++ ++  +  T K   L+ +               G  EI+YLDE+L++ R  K
Sbjct: 203 FKISSKSSVEITYESSTIKPDQLMNIFRKNMDLLLGIFNPEGLFEISYLDEDLQVGRDGK 262

[Close]

BLAST of Carg24010 vs. Swiss-Prot
Match: sp|P80471|LIPC_SOLTU (Light-induced protein, chloroplastic OS=Solanum tuberosum OX=4113 PE=1 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 1.5e-07
Identity = 57/223 (25.56%), Postives = 93/223 (41.70%), Query Frame = 0


Query: 67  KKGKDVGALKEELLEAIATLDRGAEATPEDQEMVDQISRKLEAVNPTKEPLKS-DLLNGK 126
           K+  ++  LK++L +++   +RG  A+ E +  + ++  +LE+ NP   P ++  LLNGK
Sbjct: 94  KEPSEIELLKKQLADSLYGTNRGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGK 153

Query: 127 WELIYTTSTS---ILQTERPKLLRSRTNYQGINVDTLRAQNMESWP---FFNQVTANLK- 186
           W L YT+ +    +L      L+R     Q I+ ++   QN   +        ++ N K 
Sbjct: 154 WILAYTSFSGLFPLLSRGNLPLVRVEEISQTIDSESFTVQNSVVFAGPLATTSISTNAKF 213

Query: 187 ----------------------------PLNTTKVAVQFDTFKILGLI------------ 233
                                       P N   +  + D     GLI            
Sbjct: 214 EVRSPKRVQIKFEEGIIGTPQLTDSIVLPENVEFLGQKIDLSPFKGLITSVQDTASSVAK 273

[Close]

BLAST of Carg24010 vs. Swiss-Prot
Match: sp|Q9LW57|PAP6_ARATH (Plastid-lipid-associated protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PAP6 PE=1 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 2.0e-07
Identity = 69/252 (27.38%), Postives = 109/252 (43.25%), Query Frame = 0


Query: 17  SPPPTSQPARLLLRIPSNTNSAAPTSINKLLTAAPSDKWRLRISFFPAFLKKGKDVGALK 76
           SP  T + +RL   +P   N AA +S+ ++                    +    +  LK
Sbjct: 33  SPLTTPKSSRLGFTVPEKRNLAANSSLVEVSIGGEXXXXXXXXXXXXXXXQ----IALLK 92

Query: 77  EELLEAIATLDRGAEATPEDQEMVDQISRKLE-AVNPTKEPLKSDLLNGKWELIYTT--S 136
            +LL  ++ L+RG  A+ +D E  +  +++LE A  P       D L GKW L+Y++  S
Sbjct: 93  LKLLSVVSGLNRGLVASVDDLERAEVAAKELETAGGPVDLTDDLDKLQGKWRLLYSSAFS 152

Query: 137 TSILQTERPKLLRSR-------TNYQGINVDTLRAQNMES------WPFFN-QVTANL-- 196
           +  L   RP L   R         +Q I+V +    N+        WPF   + TA L  
Sbjct: 153 SRSLGGSRPGLPTGRLIPVTLGQVFQRIDVFSKDFDNIAEVELGAPWPFPPLEATATLAH 212

Query: 197 --KPLNTTKVAVQFD--TFKILGLI----------------PVKAPGRARGELEITYLDE 230
             + L T K+ + F+  T K  G +                P   PG   G+ E+TY+D+
Sbjct: 213 KFELLGTCKIKITFEKTTVKTSGNLSQIPPFDIPRLPDSFRPSSNPG--TGDFEVTYVDD 272

[Close]

BLAST of Carg24010 vs. TrEMBL
Match: tr|A0A0A0M3B4|A0A0A0M3B4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G665380 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 2.9e-104
Identity = 208/246 (84.55%), Postives = 219/246 (89.02%), Query Frame = 0


Query: 1   MAMALSSSTITPTLKLSPPPTSQPARLLLR-IPSNTNSAAPTSINKLLTAAPSDKWRLRI 60
           MA+ALSSST TPT KL PP TSQP R LL  IPSN     P+S   LLT++PS KWRLRI
Sbjct: 3   MAVALSSSTATPTTKLWPPSTSQPPRFLLPIIPSN-----PSSNTNLLTSSPSHKWRLRI 62

Query: 61  SFFPAFLKKGK--DVGALKEELLEAIATLDRGAEATPEDQEMVDQISRKLEAVNPTKEPL 120
           SFFPAFL KGK  +V ALK+ELL+AI  LDRGAEATPEDQEMVDQISRKLEAVNPTKEPL
Sbjct: 63  SFFPAFLNKGKGNNVTALKQELLQAIEPLDRGAEATPEDQEMVDQISRKLEAVNPTKEPL 122

Query: 121 KSDLLNGKWELIYTTSTSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANL 180
           KSDLLNGKWELIYTTS SILQTERPK LRS+ NYQGINVD+LRAQNMESWPFFNQVTA+L
Sbjct: 123 KSDLLNGKWELIYTTSRSILQTERPKFLRSKLNYQGINVDSLRAQNMESWPFFNQVTADL 182

Query: 181 KPLNTTKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDP 240
           KPLN+ KVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDP
Sbjct: 183 KPLNSRKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDP 242

Query: 241 SYRVPV 244
           SYRVPV
Sbjct: 243 SYRVPV 243

[Close]

BLAST of Carg24010 vs. TrEMBL
Match: tr|A0A1S3B9I8|A0A1S3B9I8_CUCME (probable plastid-lipid-associated protein 4, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103487254 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 3.8e-104
Identity = 205/245 (83.67%), Postives = 217/245 (88.57%), Query Frame = 0


Query: 1   MAMALSSSTITPTLKLSPPPTSQPARLLLRIPSNTNSAAPTSINKLLTAAPSDKWRLRIS 60
           MA+ALSSST+TPT K  PP TSQP R L  IPSN     P+S   LLT++PS KWRLRIS
Sbjct: 3   MAVALSSSTVTPTAKFWPPSTSQPPRFLPIIPSN-----PSSNTNLLTSSPSHKWRLRIS 62

Query: 61  FFPAFLKKGK--DVGALKEELLEAIATLDRGAEATPEDQEMVDQISRKLEAVNPTKEPLK 120
           FFPAFL KGK  +V ALK+ELL+AIA LDRGAEATPEDQEMVDQISRKLEAVNP KEPLK
Sbjct: 63  FFPAFLNKGKGNNVTALKQELLQAIAPLDRGAEATPEDQEMVDQISRKLEAVNPIKEPLK 122

Query: 121 SDLLNGKWELIYTTSTSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTANLK 180
           SDLLNGKWELIYTTS SILQTERPK  RSR NYQGINVD+LRAQNMESWPFFNQVTA+LK
Sbjct: 123 SDLLNGKWELIYTTSRSILQTERPKFFRSRINYQGINVDSLRAQNMESWPFFNQVTADLK 182

Query: 181 PLNTTKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMIDPS 240
           PLN+ KVAVQFDTFKILGLIPVKAPGRARGEL+ITYLDEELRISRGDKGNLFILKMIDPS
Sbjct: 183 PLNSRKVAVQFDTFKILGLIPVKAPGRARGELDITYLDEELRISRGDKGNLFILKMIDPS 242

Query: 241 YRVPV 244
           YRVPV
Sbjct: 243 YRVPV 242

[Close]

BLAST of Carg24010 vs. TrEMBL
Match: tr|A0A1U8AMF4|A0A1U8AMF4_NELNU (probable plastid-lipid-associated protein 4, chloroplastic OS=Nelumbo nucifera OX=4432 GN=LOC104605804 PE=4 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 1.5e-89
Identity = 180/247 (72.87%), Postives = 198/247 (80.16%), Query Frame = 0


Query: 3   MALSSST------ITPTLKLSPPPTSQPARLLLRIPSNTNSAAPTSINKLLTAAPSDKWR 62
           MALSS+T      I  T  L   P S  + + L  P+  ++    SI KL  A    KWR
Sbjct: 1   MALSSATEATAINIRSTAALFTGPRSYSSLISLSFPARPSNDG--SIKKLSIATGDSKWR 60

Query: 63  LRISFFPAFLKKGKDVGALKEELLEAIATLDRGAEATPEDQEMVDQISRKLEAVNPTKEP 122
            R+SF P+F KK KD  ALKEELLEAIA LDRGAEATPED E +DQI+RKLEAVNPTK+P
Sbjct: 61  TRVSFLPSFFKKAKDATALKEELLEAIAPLDRGAEATPEDLEQIDQIARKLEAVNPTKQP 120

Query: 123 LKSDLLNGKWELIYTTSTSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTAN 182
           LKSDLLNGKWELIYTTS SILQT+RPKLLRSR NYQ INVDTLRAQNMESWPFFNQVTA+
Sbjct: 121 LKSDLLNGKWELIYTTSKSILQTQRPKLLRSRVNYQAINVDTLRAQNMESWPFFNQVTAD 180

Query: 183 LKPLNTTKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMID 242
           L PLN  KVAV+FD FKI+GLIP+KAPGRARGELEITYLDEELR+SRGDKGNLFILKM+D
Sbjct: 181 LTPLNARKVAVKFDKFKIVGLIPIKAPGRARGELEITYLDEELRVSRGDKGNLFILKMVD 240

Query: 243 PSYRVPV 244
           PSYRVPV
Sbjct: 241 PSYRVPV 245

[Close]

BLAST of Carg24010 vs. TrEMBL
Match: tr|A0A218X3V7|A0A218X3V7_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr003549 PE=4 SV=1)

HSP 1 Score: 336.7 bits (862), Expect = 4.5e-89
Identity = 176/248 (70.97%), Postives = 198/248 (79.84%), Query Frame = 0


Query: 3   MALSSSTITPTLKLSP-------PPTSQPARLLLRIPSNTNSAAPTSINKLLTAAPSDKW 62
           M LS   + P   LSP       P    P    L  P  + S +P ++    +AA  +KW
Sbjct: 1   MTLSYLQLHPPPTLSPNSSSSAGPVPLHPQSHHLSFPFPSKSTSPQALPSSSSAASPEKW 60

Query: 63  RLRISFFPAFLKKGKDVGALKEELLEAIATLDRGAEATPEDQEMVDQISRKLEAVNPTKE 122
           R ++SFFPAFLKKGKD  ALKEELL+AIA LDRGAEATPEDQ+ VD+++R+LEA NPTKE
Sbjct: 61  RAKVSFFPAFLKKGKDAQALKEELLDAIAPLDRGAEATPEDQQRVDEMARRLEAANPTKE 120

Query: 123 PLKSDLLNGKWELIYTTSTSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFNQVTA 182
           PLKS LLNGKWELIYTTS SILQT+RPK LRS TNYQGINVDTLRAQNMESWPFFNQVTA
Sbjct: 121 PLKSPLLNGKWELIYTTSQSILQTQRPKFLRSTTNYQGINVDTLRAQNMESWPFFNQVTA 180

Query: 183 NLKPLNTTKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFILKMI 242
           +L PLN+ KVAV+FD FKI GLIP+KAPGRARGELEITYLDEELR+SRGDKGNLFILKM+
Sbjct: 181 DLTPLNSRKVAVKFDYFKIAGLIPIKAPGRARGELEITYLDEELRVSRGDKGNLFILKMV 240

Query: 243 DPSYRVPV 244
           DPSYRVPV
Sbjct: 241 DPSYRVPV 248

[Close]

BLAST of Carg24010 vs. TrEMBL
Match: tr|A0A251RM69|A0A251RM69_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G566700 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 2.9e-88
Identity = 179/252 (71.03%), Postives = 203/252 (80.56%), Query Frame = 0


Query: 3   MALSSSTITPTLKLSPPPTSQPARLLLRIPSN---TNSAAPTS--------INKLLTAAP 62
           MALSSS ++PTL L+   +S        +PS+   T+ + PT          ++L + + 
Sbjct: 1   MALSSSPLSPTL-LTTTQSSXXXSTPKLLPSHSPLTSFSFPTKPTTTHTIHFHRLSSTSA 60

Query: 63  SDKWRLRISFFPAFLKKGKDVGALKEELLEAIATLDRGAEATPEDQEMVDQISRKLEAVN 122
           SDKWR ++SFFPAF  KGKD   LKEELL+AIA+LDRGA+ATPEDQ+ VDQI+RKLEAVN
Sbjct: 61  SDKWRAKVSFFPAFSSKGKDAKTLKEELLDAIASLDRGADATPEDQQTVDQIARKLEAVN 120

Query: 123 PTKEPLKSDLLNGKWELIYTTSTSILQTERPKLLRSRTNYQGINVDTLRAQNMESWPFFN 182
           PTKEPLKSDLLNGKWELIYTTS SILQT+RPK LRSR NYQ IN DTLRAQNMESWP FN
Sbjct: 121 PTKEPLKSDLLNGKWELIYTTSKSILQTQRPKFLRSRVNYQAINADTLRAQNMESWPTFN 180

Query: 183 QVTANLKPLNTTKVAVQFDTFKILGLIPVKAPGRARGELEITYLDEELRISRGDKGNLFI 242
           QVTA+L PLN  KVAV+FD FKI GLIPVKAPGRARGELEITYLDEELR+SRGDKGNLFI
Sbjct: 181 QVTADLTPLNARKVAVKFDYFKIAGLIPVKAPGRARGELEITYLDEELRVSRGDKGNLFI 240

Query: 243 LKMIDPSYRVPV 244
           LKM+DPSYRVPV
Sbjct: 241 LKMVDPSYRVPV 251

The following BLAST results are available for this feature:

BLAST of Carg24010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532027.1	4.1e-126	98.35	probable plastid-lipid-associated protein 4, chloroplastic [Cucurbita pepo subsp...	[more]
XP_022989717.1	5.3e-126	97.53	probable plastid-lipid-associated protein 4, chloroplastic [Cucurbita maxima]	[more]
XP_022927890.1	2.0e-125	97.53	probable plastid-lipid-associated protein 4, chloroplastic [Cucurbita moschata] ...	[more]
XP_022156963.1	8.8e-105	85.19	probable plastid-lipid-associated protein 4, chloroplastic [Momordica charantia]	[more]
XP_011660249.1	4.4e-104	84.55	PREDICTED: probable plastid-lipid-associated protein 4, chloroplastic isoform X1...	[more]

BLAST of Carg24010 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G26070.1	1.6e-71	59.68	Plastid-lipid associated protein PAP / fibrillin family protein	[more]
AT3G26080.1	4.4e-66	61.11	plastid-lipid associated protein PAP / fibrillin family protein	[more]
AT5G09820.2	9.0e-11	28.95	Plastid-lipid associated protein PAP / fibrillin family protein	[more]
AT3G23400.1	1.1e-08	27.38	Plastid-lipid associated protein PAP / fibrillin family protein	[more]
AT5G19940.1	3.2e-08	27.76	Plastid-lipid associated protein PAP / fibrillin family protein	[more]

BLAST of Carg24010 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LU85\|PAP4_ARATH	2.8e-70	59.68	Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thalia...	[more]
sp\|Q6DBN2\|PAP5_ARATH	7.9e-65	61.11	Probable plastid-lipid-associated protein 5, chloroplastic OS=Arabidopsis thalia...	[more]
sp\|Q5M755\|PAP7_ARATH	1.6e-09	28.95	Probable plastid-lipid-associated protein 7, chloroplastic OS=Arabidopsis thalia...	[more]
sp\|P80471\|LIPC_SOLTU	1.5e-07	25.56	Light-induced protein, chloroplastic OS=Solanum tuberosum OX=4113 PE=1 SV=2	[more]
sp\|Q9LW57\|PAP6_ARATH	2.0e-07	27.38	Plastid-lipid-associated protein 6, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]

BLAST of Carg24010 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0M3B4\|A0A0A0M3B4_CUCSA	2.9e-104	84.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G665380 PE=4 SV=1	[more]
tr\|A0A1S3B9I8\|A0A1S3B9I8_CUCME	3.8e-104	83.67	probable plastid-lipid-associated protein 4, chloroplastic isoform X1 OS=Cucumis...	[more]
tr\|A0A1U8AMF4\|A0A1U8AMF4_NELNU	1.5e-89	72.87	probable plastid-lipid-associated protein 4, chloroplastic OS=Nelumbo nucifera O...	[more]
tr\|A0A218X3V7\|A0A218X3V7_PUNGR	4.5e-89	70.97	Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr003549 PE=4 SV=1	[more]
tr\|A0A251RM69\|A0A251RM69_PRUPE	2.9e-88	71.03	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G566700 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR019825	Lectin_legB_Mn/Ca_BS
IPR006843	PAP/fibrillin_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg24010-RA	Carg24010-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006843	Plastid lipid-associated protein/fibrillin conserved domain	PFAM	PF04755	PAP_fibrillin	coord: 75..233 e-value: 1.2E-38 score: 133.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	PANTHER	PTHR31906	FAMILY NOT NAMED	coord: 3..243
None	No IPR available	PANTHER	PTHR31906:SF14	PLASTID-LIPID-ASSOCIATED PROTEIN 4, CHLOROPLASTIC-RELATED	coord: 3..243
IPR019825	Legume lectin, beta chain, Mn/Ca-binding site	PROSITE	PS00307	LECTIN_LEGUME_BETA	coord: 185..191

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg24010	Cla003468	Watermelon (97103) v1	carwmB0734
Carg24010	ClCG09G014000	Watermelon (Charleston Gray)	carwcgB0712
Carg24010	CmaCh11G016050	Cucurbita maxima (Rimu)	carcmaB1028
Carg24010	CmoCh11G015230	Cucurbita moschata (Rifu)	carcmoB1000
Carg24010	Lsi03G008570	Bottle gourd (USVL1VR-Ls)	carlsiB674
Carg24010	Cp4.1LG04g06680	Cucurbita pepo (Zucchini)	carcpeB1035
Carg24010	Cla97C09G176460	Watermelon (97103) v2	carwmbB0769
Carg24010	Bhi05G000586	Wax gourd	carwgoB0868

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg24010	Wild cucumber (PI 183967)	carcpiB0768
Carg24010	Cucumber (Chinese Long) v2	carcuB0752
Carg24010	Cucumber (Chinese Long) v3	carcucB0771
Carg24010	Melon (DHL92) v3.5.1	carmeB0730
Carg24010	Melon (DHL92) v3.6.1	carmedB0741
Carg24010	Watermelon (Charleston Gray)	carwcgB0713
Carg24010	Watermelon (97103) v2	carwmbB0770
Carg24010	Silver-seed gourd	carcarB566
Carg24010	Cucumber (Gy14) v2	carcgybB0730
Carg24010	Cucumber (Gy14) v1	carcgyB0826
Carg24010	Cucurbita maxima (Rimu)	carcmaB1029
Carg24010	Cucurbita moschata (Rifu)	carcmoB1001
Carg24010	Cucurbita pepo (Zucchini)	carcpeB1034