Carg23978 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23978
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Myb transcription factor
Location	Cucurbita_argyrosperma_scaffold_253 : 251880 .. 252238 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGAGCTCCATGTTGTGACAAAGCCAATGTAAAGAAAGGTCCTTGGTCCCCTGATGAGGATGCCACTCTCAAACTCTATGTGGAAACTCATGGCACTGCAGGCACCTGGATTGCTCTGCCCACAAAAGCTGGTGAACTCTCTTTCTTGTTTCCAACTTGAATTACCACCATTTATGTTTGATATCTCTCTGTTATGTATTATAAACTGCAGGGCTAAAGAGATGTGGCAAGAGCTGCAGGTTACGGTGGCTAAACTATCTTAGACCCAACATCAAGCATGGAGACTTTACAGAGGATGAAGACAATCTCATCTTTAATCTCTATAATCAATATGGAAGCAGGCAAGTTTGGTAG

mRNA sequence

ATGGGAAGAGCTCCATGTTGTGACAAAGCCAATGTAAAGAAAGGTCCTTGGTCCCCTGATGAGGATGCCACTCTCAAACTCTATGTGGAAACTCATGGCACTGCAGGCACCTGGATTGCTCTGCCCACAAAAGCTGGGCTAAAGAGATGTGGCAAGAGCTGCAGGTTACGGTGGCTAAACTATCTTAGACCCAACATCAAGCATGGAGACTTTACAGAGGATGAAGACAATCTCATCTTTAATCTCTATAATCAATATGGAAGCAGGCAAGTTTGGTAG

Coding sequence (CDS)

ATGGGAAGAGCTCCATGTTGTGACAAAGCCAATGTAAAGAAAGGTCCTTGGTCCCCTGATGAGGATGCCACTCTCAAACTCTATGTGGAAACTCATGGCACTGCAGGCACCTGGATTGCTCTGCCCACAAAAGCTGGGCTAAAGAGATGTGGCAAGAGCTGCAGGTTACGGTGGCTAAACTATCTTAGACCCAACATCAAGCATGGAGACTTTACAGAGGATGAAGACAATCTCATCTTTAATCTCTATAATCAATATGGAAGCAGGCAAGTTTGGTAG

Protein sequence

MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLNYLRPNIKHGDFTEDEDNLIFNLYNQYGSRQVW

Homology

[Close]

BLAST of Carg23978 vs. NCBI nr
Match: XP_022951223.1 (transcription factor MYB36-like [Cucurbita moschata])

HSP 1 Score: 200.7 bits (509), Expect = 2.2e-48
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNIKHGDFTEDEDNLIFNLYNQYGSR
Sbjct: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 89

[Close]

BLAST of Carg23978 vs. NCBI nr
Match: XP_023537883.1 (transcription factor MYB36-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023537884.1 transcription factor MYB36-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 199.1 bits (505), Expect = 6.4e-48
Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNIKHGDFTE+EDNLIFNLYNQYGSR
Sbjct: 61 YLRPNIKHGDFTEEEDNLIFNLYNQYGSR 89

[Close]

BLAST of Carg23978 vs. NCBI nr
Match: XP_023002574.1 (transcription factor MYB36-like [Cucurbita maxima])

HSP 1 Score: 198.7 bits (504), Expect = 8.3e-48
Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNIKHGDFTEDEDNLIFNLYNQ+GSR
Sbjct: 61 YLRPNIKHGDFTEDEDNLIFNLYNQHGSR 89

[Close]

BLAST of Carg23978 vs. NCBI nr
Match: XP_008444504.1 (PREDICTED: transcription factor RAX3-like [Cucumis melo])

HSP 1 Score: 184.1 bits (466), Expect = 2.1e-43
Identity = 80/89 (89.89%), Postives = 84/89 (94.38%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCC+K  VKKGPWSPDEDA LK YVETHG AGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNIKHG+FTE+EDN+IFNLYNQYGSR
Sbjct: 61 YLRPNIKHGEFTEEEDNVIFNLYNQYGSR 89

[Close]

BLAST of Carg23978 vs. NCBI nr
Match: XP_004142913.1 (PREDICTED: transcription factor RAX3 [Cucumis sativus] >KGN62411.1 hypothetical protein Csa_2G352410 [Cucumis sativus])

HSP 1 Score: 182.6 bits (462), Expect = 6.2e-43
Identity = 79/89 (88.76%), Postives = 84/89 (94.38%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCC+K  VKKGPWSPDEDA LK YVETHG AGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNIKHG+FTE+EDN+IFNL+NQYGSR
Sbjct: 61 YLRPNIKHGEFTEEEDNVIFNLFNQYGSR 89

[Close]

BLAST of Carg23978 vs. TAIR10
Match: AT2G36890.1 (Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 163.3 bits (412), Expect = 7.0e-41
Identity = 69/89 (77.53%), Postives = 79/89 (88.76%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDKANVK+GPWSP+EDA LK Y+E  GT G WIALP KAGL+RCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNI+HGDFTE+EDN+I++L+   GSR
Sbjct: 61 YLRPNIRHGDFTEEEDNIIYSLFASIGSR 89

[Close]

BLAST of Carg23978 vs. TAIR10
Match: AT5G65790.1 (myb domain protein 68)

HSP 1 Score: 160.6 bits (405), Expect = 4.6e-40
Identity = 70/89 (78.65%), Postives = 76/89 (85.39%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDKANVKKGPWSP+EDA LK Y+E  GT G WIALP K GL+RCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKDYIENSGTGGNWIALPQKIGLRRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNIKHG F+E+EDN+I NLY   GSR
Sbjct: 61 YLRPNIKHGGFSEEEDNIICNLYVTIGSR 89

[Close]

BLAST of Carg23978 vs. TAIR10
Match: AT3G49690.1 (myb domain protein 84)

HSP 1 Score: 159.1 bits (401), Expect = 1.3e-39
Identity = 69/89 (77.53%), Postives = 76/89 (85.39%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDKANVKKGPWSP+EDA LK Y+E  GT G WIALP K GLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNIKHG F+E+E+N+I +LY   GSR
Sbjct: 61 YLRPNIKHGGFSEEEENIICSLYLTIGSR 89

[Close]

BLAST of Carg23978 vs. TAIR10
Match: AT5G57620.1 (myb domain protein 36)

HSP 1 Score: 156.8 bits (395), Expect = 6.6e-39
Identity = 67/89 (75.28%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDKANVKKGPWSP+ED  LK Y++ +GT G WIALP K GLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNIKHG F+E+ED +I +LY   GSR
Sbjct: 61 YLRPNIKHGGFSEEEDRIILSLYISIGSR 89

[Close]

BLAST of Carg23978 vs. TAIR10
Match: AT5G23000.1 (myb domain protein 37)

HSP 1 Score: 151.8 bits (382), Expect = 2.1e-37
Identity = 62/89 (69.66%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDK  VK+GPWSP+ED+ L+ Y+E +G  G WI+ P KAGL+RCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNIKHGDF+E+ED +IF+L+   GSR
Sbjct: 61 YLRPNIKHGDFSEEEDRIIFSLFAAIGSR 89

[Close]

BLAST of Carg23978 vs. Swiss-Prot
Match: sp|Q9SJL7|RAX2_ARATH (Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 1.3e-39
Identity = 69/89 (77.53%), Postives = 79/89 (88.76%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDKANVK+GPWSP+EDA LK Y+E  GT G WIALP KAGL+RCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNI+HGDFTE+EDN+I++L+   GSR
Sbjct: 61 YLRPNIRHGDFTEEEDNIIYSLFASIGSR 89

[Close]

BLAST of Carg23978 vs. Swiss-Prot
Match: sp|Q9M2Y9|RAX3_ARATH (Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 2.4e-38
Identity = 69/89 (77.53%), Postives = 76/89 (85.39%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDKANVKKGPWSP+EDA LK Y+E  GT G WIALP K GLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNIKHG F+E+E+N+I +LY   GSR
Sbjct: 61 YLRPNIKHGGFSEEEENIICSLYLTIGSR 89

[Close]

BLAST of Carg23978 vs. Swiss-Prot
Match: sp|Q9FKL2|MYB36_ARATH (Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 1.2e-37
Identity = 67/89 (75.28%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDKANVKKGPWSP+ED  LK Y++ +GT G WIALP K GLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKKGPWSPEEDVKLKDYIDKYGTGGNWIALPQKIGLKRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNIKHG F+E+ED +I +LY   GSR
Sbjct: 61 YLRPNIKHGGFSEEEDRIILSLYISIGSR 89

[Close]

BLAST of Carg23978 vs. Swiss-Prot
Match: sp|Q9FG68|RAX1_ARATH (Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 3.8e-36
Identity = 62/89 (69.66%), Postives = 75/89 (84.27%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDK  VK+GPWSP+ED+ L+ Y+E +G  G WI+ P KAGL+RCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNIKHGDF+E+ED +IF+L+   GSR
Sbjct: 61 YLRPNIKHGDFSEEEDRIIFSLFAAIGSR 89

[Close]

BLAST of Carg23978 vs. Swiss-Prot
Match: sp|F4JSU0|MYB87_ARATH (Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 9.4e-35
Identity = 62/89 (69.66%), Postives = 72/89 (80.90%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDK  VKKGPWS +EDA LK Y+E HGT   WI+LP + G+KRCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKMAVKKGPWSTEEDAVLKSYIEKHGTGNNWISLPQRIGIKRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPN+KHG FT++ED +I +LY   GSR
Sbjct: 61 YLRPNLKHGGFTDEEDYIICSLYITIGSR 89

[Close]

BLAST of Carg23978 vs. TrEMBL
Match: tr|A0A1S3BB79|A0A1S3BB79_CUCME (transcription factor RAX3-like OS=Cucumis melo OX=3656 GN=LOC103487802 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.4e-43
Identity = 80/89 (89.89%), Postives = 84/89 (94.38%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCC+K  VKKGPWSPDEDA LK YVETHG AGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNIKHG+FTE+EDN+IFNLYNQYGSR
Sbjct: 61 YLRPNIKHGEFTEEEDNVIFNLYNQYGSR 89

[Close]

BLAST of Carg23978 vs. TrEMBL
Match: tr|A0A0A0LR01|A0A0A0LR01_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G352410 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 4.1e-43
Identity = 79/89 (88.76%), Postives = 84/89 (94.38%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCC+K  VKKGPWSPDEDA LK YVETHG AGTWIALPTKAGLKRCGKSCRLRWLN
Sbjct: 1  MGRAPCCEKGKVKKGPWSPDEDAILKSYVETHGIAGTWIALPTKAGLKRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSR 90
          YLRPNIKHG+FTE+EDN+IFNL+NQYGSR
Sbjct: 61 YLRPNIKHGEFTEEEDNVIFNLFNQYGSR 89

[Close]

BLAST of Carg23978 vs. TrEMBL
Match: tr|A0A2P5DTP6|A0A2P5DTP6_PARAD (Octamer-binding transcription factor OS=Parasponia andersonii OX=3476 GN=PanWU01x14_033380 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 1.3e-41
Identity = 76/92 (82.61%), Postives = 85/92 (92.39%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDKANVK+GPWSP+EDATLK Y+ETHGT G WIALP KAGL+RCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKRGPWSPEEDATLKTYLETHGTGGNWIALPRKAGLRRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSRQVW 93
          YLRP+IKHG FTE+ED++I NLYNQ GSRQV+
Sbjct: 61 YLRPDIKHGGFTEEEDHIICNLYNQMGSRQVY 92

[Close]

BLAST of Carg23978 vs. TrEMBL
Match: tr|A0A2P5EKV3|A0A2P5EKV3_9ROSA (Octamer-binding transcription factor OS=Trema orientalis OX=63057 GN=TorRG33x02_180720 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 2.2e-41
Identity = 76/91 (83.52%), Postives = 84/91 (92.31%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDKANVK+GPWSP+EDATLK Y+ETHGT G WIALP KAGL+RCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKRGPWSPEEDATLKTYLETHGTGGNWIALPRKAGLRRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSRQV 92
          YLRP+IKHG FTE+ED++I NLYNQ GSRQV
Sbjct: 61 YLRPDIKHGGFTEEEDHIICNLYNQMGSRQV 91

[Close]

BLAST of Carg23978 vs. TrEMBL
Match: tr|A0A0L9V197|A0A0L9V197_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan07g260400 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 3.8e-41
Identity = 76/91 (83.52%), Postives = 83/91 (91.21%), Query Frame = 0


Query: 1  MGRAPCCDKANVKKGPWSPDEDATLKLYVETHGTAGTWIALPTKAGLKRCGKSCRLRWLN 60
          MGRAPCCDKANVK+GPWSP+EDATLK YVE+HGT G WIALP KAGL+RCGKSCRLRWLN
Sbjct: 1  MGRAPCCDKANVKRGPWSPEEDATLKAYVESHGTGGNWIALPKKAGLRRCGKSCRLRWLN 60

Query: 61 YLRPNIKHGDFTEDEDNLIFNLYNQYGSRQV 92
          YLRP+IKHG FTE+EDN+I NLY Q GSRQV
Sbjct: 61 YLRPDIKHGGFTEEEDNIICNLYGQMGSRQV 91

The following BLAST results are available for this feature:

BLAST of Carg23978 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022951223.1	2.2e-48	100.00	transcription factor MYB36-like [Cucurbita moschata]	[more]
XP_023537883.1	6.4e-48	98.88	transcription factor MYB36-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_0235...	[more]
XP_023002574.1	8.3e-48	98.88	transcription factor MYB36-like [Cucurbita maxima]	[more]
XP_008444504.1	2.1e-43	89.89	PREDICTED: transcription factor RAX3-like [Cucumis melo]	[more]
XP_004142913.1	6.2e-43	88.76	PREDICTED: transcription factor RAX3 [Cucumis sativus] >KGN62411.1 hypothetical ...	[more]

BLAST of Carg23978 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G36890.1	7.0e-41	77.53	Duplicated homeodomain-like superfamily protein	[more]
AT5G65790.1	4.6e-40	78.65	myb domain protein 68	[more]
AT3G49690.1	1.3e-39	77.53	myb domain protein 84	[more]
AT5G57620.1	6.6e-39	75.28	myb domain protein 36	[more]
AT5G23000.1	2.1e-37	69.66	myb domain protein 37	[more]

BLAST of Carg23978 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SJL7\|RAX2_ARATH	1.3e-39	77.53	Transcription factor RAX2 OS=Arabidopsis thaliana OX=3702 GN=RAX2 PE=1 SV=1	[more]
sp\|Q9M2Y9\|RAX3_ARATH	2.4e-38	77.53	Transcription factor RAX3 OS=Arabidopsis thaliana OX=3702 GN=RAX3 PE=2 SV=1	[more]
sp\|Q9FKL2\|MYB36_ARATH	1.2e-37	75.28	Transcription factor MYB36 OS=Arabidopsis thaliana OX=3702 GN=MYB36 PE=1 SV=1	[more]
sp\|Q9FG68\|RAX1_ARATH	3.8e-36	69.66	Transcription factor RAX1 OS=Arabidopsis thaliana OX=3702 GN=RAX1 PE=1 SV=1	[more]
sp\|F4JSU0\|MYB87_ARATH	9.4e-35	69.66	Transcription factor MYB87 OS=Arabidopsis thaliana OX=3702 GN=MYB87 PE=2 SV=1	[more]

BLAST of Carg23978 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BB79\|A0A1S3BB79_CUCME	1.4e-43	89.89	transcription factor RAX3-like OS=Cucumis melo OX=3656 GN=LOC103487802 PE=4 SV=1	[more]
tr\|A0A0A0LR01\|A0A0A0LR01_CUCSA	4.1e-43	88.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G352410 PE=4 SV=1	[more]
tr\|A0A2P5DTP6\|A0A2P5DTP6_PARAD	1.3e-41	82.61	Octamer-binding transcription factor OS=Parasponia andersonii OX=3476 GN=PanWU01...	[more]
tr\|A0A2P5EKV3\|A0A2P5EKV3_9ROSA	2.2e-41	83.52	Octamer-binding transcription factor OS=Trema orientalis OX=63057 GN=TorRG33x02_...	[more]
tr\|A0A0L9V197\|A0A0L9V197_PHAAN	3.8e-41	83.52	Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan07g260400 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017877	Myb-like_dom
IPR017930	Myb_dom
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23978-RA	Carg23978-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 13..64 e-value: 6.5E-9 score: 45.6
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 14..62 e-value: 2.3E-13 score: 50.0
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 16..62 e-value: 2.65765E-6 score: 39.0958
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 7..68 e-value: 5.0E-19 score: 69.8
None	No IPR available	PANTHER	PTHR10641:SF654	TRANSCRIPTION FACTOR RAX2-RELATED	coord: 1..89
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 1..89
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 9..66 score: 18.182
IPR017877	Myb-like domain	PROSITE	PS50090	MYB_LIKE	coord: 63..92 score: 5.575
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 15..90

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23978	Cp4.1LG07g06300	Cucurbita pepo (Zucchini)	carcpeB0976

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23978	Wild cucumber (PI 183967)	carcpiB0732
Carg23978	Cucumber (Chinese Long) v2	carcuB0717
Carg23978	Cucumber (Chinese Long) v3	carcucB0735
Carg23978	Bottle gourd (USVL1VR-Ls)	carlsiB637
Carg23978	Melon (DHL92) v3.5.1	carmeB0696
Carg23978	Melon (DHL92) v3.6.1	carmedB0709
Carg23978	Watermelon (Charleston Gray)	carwcgB0674
Carg23978	Watermelon (97103) v1	carwmB0695
Carg23978	Watermelon (97103) v2	carwmbB0726
Carg23978	Wax gourd	carwgoB0819
Carg23978	Silver-seed gourd	carcarB223
Carg23978	Cucumber (Gy14) v1	carcgyB0780
Carg23978	Cucurbita maxima (Rimu)	carcmaB0975
Carg23978	Cucurbita maxima (Rimu)	carcmaB0976
Carg23978	Cucurbita moschata (Rifu)	carcmoB0948
Carg23978	Cucurbita moschata (Rifu)	carcmoB0949
Carg23978	Cucurbita pepo (Zucchini)	carcpeB0975