Carg23937 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23937
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein CHLOROPLAST IMPORT APPARATUS 2-like
Location	Cucurbita_argyrosperma_scaffold_173 : 263568 .. 265828 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCTCCGTGTATTAGCGGCGGTGGAAGAGCTTACAGTTTCGACCTAGAAATTGTGAAATCTCCATCTTCTTCATGGACGAGAACTTCGCAATCTTCTTCTTCGCCTTCTTCGACTCTTTCTGAATCAAGCAATAATAATACTCAGCTTGCAATCTCTACTCGAAAATCACGAACTCCGCGAAAACGCCCAAATCAAACGTACAATGAGGCCACTCTTCTGCTTTCTACGGCGTATCCGAATGTTTTCTCTGCCAAACACCTCACGAATCCGAGAAAATTCACGAAATCTCATGATTCTCTCTTCTCTGATTCGGCGGAATTGCTGTTGCCGTTTCGAGGAATCGATTCGTCCGAGTTTCTCATCCATCAGCCGCTGGAAAAACCTAATTCCCAAATTCATTCGAAATTGGCGAATCTGTGGGAGAATCGGCCGTGTTCCAGCCCAGGGGAGGTTGATTTCCAGCCGGATTCGATGGAGATGGAAGATTTCGATGCTGAATCGATTCTTGACGAGGAAATCGAAGAGGGAATCGATAGTATCTTGGGGAATCTGTGTGTGGATAACCTAGAAACAGGCGATTCGGTGCAGGATTCTTGTGCGAATAATCATCCTTGGAATTGTAATTGTCCCTGGAATCCAATCGGCTTAGGAGGATTAAACCAGAAATTCGAATCCGGTCATGGAATCGAACGAACAGCAATCCGAGAAGTCGACAATGGAAACTGGTGGCGCTTTCCGACTGTCGATGTAGTCGAAATCTCTCCGAAACTAAATCCAAAGCCACCGGCACCGTCCGCCCTGGCAACGAAGAAGAAGAAAAAGAAAGTGGAGAAGCTTACAGTAATCGAATCGAAGAAAGCCGCAATGGCACCAGAAAAGGAGAAATCGGAGAAGCCGATTCCGAAAGGATTGGTTCTGAAACTGAACTACGAAGCCGTCGCCGACGCTTGGTCCAACCGAGGATCCCCATTTTCCGACGAGATTCCGGCGTCCGACACGGCGGGAAGTGATGTAAATGTACGTCTCTCATCCCGCCCCCGAAAATCAAAACCCAAGAAACTCTGAAAAAAAAAAAAAACAAAACAAAAACAAAAATTCCTTCCCCCCCGGAGTTCTAGGAATCCAAATCTTTCTCTGTTACTGTTTCATTCTCCTGAAAAAAAAAACAAAAAACAAAAATATTAGCGTTAAATTTGTATTTTTTTTTTATTAGTCTTTATTCATCTCTATAATTTTTAGTTCTTAGGTCAAATATTTTAAAATTGTCGGATTTAAATAAACTATGGGTTAAAATTATAATATTTCCCTTTTTTTTTATTGTTATAAATAATTTAAAAAGAACATTTTCCTTTTTTTAATAGAAAATTTAATGTGCTTTTCATTAATTTTAAATTATTTTATTTTGACCATTTATAAATTTCCTTGTCAGTGGGTCACTTTTCTCACAAAAAAAAAATCTAAAACGAAATTACGAAAAAGGGTGGAAAAAATCATTTAAATATGGTGTTTAGTGACGAGCCTCATTCAAAAGCGAGGGTAATATTGTAATAACATCTTTAACTAAAAATAAGCTTTATTGAATGTTATTTTTTTAAAAAAGAAAACCGAAATGACGGAATTATCCTTGGTGGTGAAGTAATTACATGTTGTCCAAAGTAGGGAATAATGACTAAAGAGTGAGGGTATTTTTGGAATTTTGCAGGCGAGGCTGGCTCAGATTGATTTATTTTCGGACGGTGGAGGATTGTTGAGAGAAGCCAGCGTGTTGCGGTACAAGGAGAAAAAGCGGACCCGTCTTTTCTCGAAGAAGATAAGGTATCAAGTCAGAAAAGTCAACGCAGATGGACGGCCCAGAATGAAGGTATGTATGTGAATCTGCTGCATCCACCCTCATCTGATTCCACCCTTTTTTTTTTATAAATTAAAATATCATTTTTTTTAAAATTAAAATAACATTTTATTTCTTAAAAAAAATGATATTTAATGAATTTAGAGATTAATTAATTAAAAAAGAAAAGGAGGAGTGAAAAGACATTTCACTTTTGGCAGGGGCGGTTTGTGAGGAGGCCTAATTCAAGCGCCAGCCAACAGAGATAGACAGCAGCCTTTTAGGGTTCAGAAACGCTCATTGCTGAGTTGTCAGCTTTCCTTTTTTATTATTTATTTTTTATTTTTAACTTTCTTGCATTTAATTATTATCCCCCAACCTTTTCTTATTTCTTTTTTGCCCCCAATTTTCCATAATTACTTTTCTT

mRNA sequence

ATGTCTTCTCCGTGTATTAGCGGCGGTGGAAGAGCTTACAGTTTCGACCTAGAAATTGTGAAATCTCCATCTTCTTCATGGACGAGAACTTCGCAATCTTCTTCTTCGCCTTCTTCGACTCTTTCTGAATCAAGCAATAATAATACTCAGCTTGCAATCTCTACTCGAAAATCACGAACTCCGCGAAAACGCCCAAATCAAACGTACAATGAGGCCACTCTTCTGCTTTCTACGGCGTATCCGAATGTTTTCTCTGCCAAACACCTCACGAATCCGAGAAAATTCACGAAATCTCATGATTCTCTCTTCTCTGATTCGGCGGAATTGCTGTTGCCGTTTCGAGGAATCGATTCGTCCGAGTTTCTCATCCATCAGCCGCTGGAAAAACCTAATTCCCAAATTCATTCGAAATTGGCGAATCTGTGGGAGAATCGGCCGTGTTCCAGCCCAGGGGAGGTTGATTTCCAGCCGGATTCGATGGAGATGGAAGATTTCGATGCTGAATCGATTCTTGACGAGGAAATCGAAGAGGGAATCGATAGTATCTTGGGGAATCTGTGTGTGGATAACCTAGAAACAGGCGATTCGGTGCAGGATTCTTGTGCGAATAATCATCCTTGGAATTGTAATTGTCCCTGGAATCCAATCGGCTTAGGAGGATTAAACCAGAAATTCGAATCCGGTCATGGAATCGAACGAACAGCAATCCGAGAAGTCGACAATGGAAACTGGTGGCGCTTTCCGACTGTCGATGTAGTCGAAATCTCTCCGAAACTAAATCCAAAGCCACCGGCACCGTCCGCCCTGGCAACGAAGAAGAAGAAAAAGAAAGTGGAGAAGCTTACAGTAATCGAATCGAAGAAAGCCGCAATGGCACCAGAAAAGGAGAAATCGGAGAAGCCGATTCCGAAAGGATTGGTTCTGAAACTGAACTACGAAGCCGTCGCCGACGCTTGGTCCAACCGAGGATCCCCATTTTCCGACGAGATTCCGGCGTCCGACACGGCGGGAAGTGATGTAAATGCGAGGCTGGCTCAGATTGATTTATTTTCGGACGGTGGAGGATTGTTGAGAGAAGCCAGCGTGTTGCGGTACAAGGAGAAAAAGCGGACCCGTCTTTTCTCGAAGAAGATAAGGTATCAAGTCAGAAAAGTCAACGCAGATGGACGGCCCAGAATGAAGGGGCGGTTTGTGAGGAGGCCTAATTCAAGCGCCAGCCAACAGAGATAGACAGCAGCCTTTTAGGGTTCAGAAACGCTCATTGCTGAGTTGTCAGCTTTCCTTTTTTATTATTTATTTTTTATTTTTAACTTTCTTGCATTTAATTATTATCCCCCAACCTTTTCTTATTTCTTTTTTGCCCCCAATTTTCCATAATTACTTTTCTT

Coding sequence (CDS)

ATGTCTTCTCCGTGTATTAGCGGCGGTGGAAGAGCTTACAGTTTCGACCTAGAAATTGTGAAATCTCCATCTTCTTCATGGACGAGAACTTCGCAATCTTCTTCTTCGCCTTCTTCGACTCTTTCTGAATCAAGCAATAATAATACTCAGCTTGCAATCTCTACTCGAAAATCACGAACTCCGCGAAAACGCCCAAATCAAACGTACAATGAGGCCACTCTTCTGCTTTCTACGGCGTATCCGAATGTTTTCTCTGCCAAACACCTCACGAATCCGAGAAAATTCACGAAATCTCATGATTCTCTCTTCTCTGATTCGGCGGAATTGCTGTTGCCGTTTCGAGGAATCGATTCGTCCGAGTTTCTCATCCATCAGCCGCTGGAAAAACCTAATTCCCAAATTCATTCGAAATTGGCGAATCTGTGGGAGAATCGGCCGTGTTCCAGCCCAGGGGAGGTTGATTTCCAGCCGGATTCGATGGAGATGGAAGATTTCGATGCTGAATCGATTCTTGACGAGGAAATCGAAGAGGGAATCGATAGTATCTTGGGGAATCTGTGTGTGGATAACCTAGAAACAGGCGATTCGGTGCAGGATTCTTGTGCGAATAATCATCCTTGGAATTGTAATTGTCCCTGGAATCCAATCGGCTTAGGAGGATTAAACCAGAAATTCGAATCCGGTCATGGAATCGAACGAACAGCAATCCGAGAAGTCGACAATGGAAACTGGTGGCGCTTTCCGACTGTCGATGTAGTCGAAATCTCTCCGAAACTAAATCCAAAGCCACCGGCACCGTCCGCCCTGGCAACGAAGAAGAAGAAAAAGAAAGTGGAGAAGCTTACAGTAATCGAATCGAAGAAAGCCGCAATGGCACCAGAAAAGGAGAAATCGGAGAAGCCGATTCCGAAAGGATTGGTTCTGAAACTGAACTACGAAGCCGTCGCCGACGCTTGGTCCAACCGAGGATCCCCATTTTCCGACGAGATTCCGGCGTCCGACACGGCGGGAAGTGATGTAAATGCGAGGCTGGCTCAGATTGATTTATTTTCGGACGGTGGAGGATTGTTGAGAGAAGCCAGCGTGTTGCGGTACAAGGAGAAAAAGCGGACCCGTCTTTTCTCGAAGAAGATAAGGTATCAAGTCAGAAAAGTCAACGCAGATGGACGGCCCAGAATGAAGGGGCGGTTTGTGAGGAGGCCTAATTCAAGCGCCAGCCAACAGAGATAG

Protein sequence

MSSPCISGGGRAYSFDLEIVKSPSSSWTRTSQSSSSPSSTLSESSNNNTQLAISTRKSRTPRKRPNQTYNEATLLLSTAYPNVFSAKHLTNPRKFTKSHDSLFSDSAELLLPFRGIDSSEFLIHQPLEKPNSQIHSKLANLWENRPCSSPGEVDFQPDSMEMEDFDAESILDEEIEEGIDSILGNLCVDNLETGDSVQDSCANNHPWNCNCPWNPIGLGGLNQKFESGHGIERTAIREVDNGNWWRFPTVDVVEISPKLNPKPPAPSALATKKKKKKVEKLTVIESKKAAMAPEKEKSEKPIPKGLVLKLNYEAVADAWSNRGSPFSDEIPASDTAGSDVNARLAQIDLFSDGGGLLREASVLRYKEKKRTRLFSKKIRYQVRKVNADGRPRMKGRFVRRPNSSASQQR

Homology

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BLAST of Carg23937 vs. NCBI nr
Match: XP_022997021.1 (protein CHLOROPLAST IMPORT APPARATUS 2 [Cucurbita maxima])

HSP 1 Score: 705.3 bits (1819), Expect = 1.2e-199
Identity = 395/409 (96.58%), Postives = 396/409 (96.82%), Query Frame = 0


Query: 1   MSSPCISGGGRAYSFDLEIVKSPSSSWTRXXXXXXXXXXXXXXXXXXXXXLAISTRKSRT 60
           MSSPCISGGGRAYSFDLEIVKSPSSSWTR    XXXXXXXXXXXXXXXX LAISTRKSRT
Sbjct: 1   MSSPCISGGGRAYSFDLEIVKSPSSSWTR-TSQXXXXXXXXXXXXXXXXQLAISTRKSRT 60

Query: 61  PRKRPNQTYNEATLLLSTAYPNVFSAKHLTNPRKFTKSHDSLFSDSAELLLPFRGIDSSE 120
           PRKRPNQTYNEATLLLSTAYPNVFSAKHLTNPRKFTKSHDSLFSDSAELLLPFRGIDSSE
Sbjct: 61  PRKRPNQTYNEATLLLSTAYPNVFSAKHLTNPRKFTKSHDSLFSDSAELLLPFRGIDSSE 120

Query: 121 FLIHQPLEKPNSQIHSKLANLWENRPCSSPGEVDFQPDSMEMEDFDAESILDEEIEEGID 180
           FLIHQPLEKPNSQIHSKLANLWENRPCSSPGEVDFQPDSMEMEDFDAESILDEEIEEGID
Sbjct: 121 FLIHQPLEKPNSQIHSKLANLWENRPCSSPGEVDFQPDSMEMEDFDAESILDEEIEEGID 180

Query: 181 SILGNLCVDNLETGDSVQDSCANNHPWNCNCPWNPIGLGGLNQKFESGHGIERTAIREVD 240
           SILGNLCVDNLETGDSVQDSCANNHPWN NC WNPIGLGG NQKFESG+GIERTAIREVD
Sbjct: 181 SILGNLCVDNLETGDSVQDSCANNHPWNWNCCWNPIGLGGFNQKFESGYGIERTAIREVD 240

Query: 241 NGNWWRFPTVDVVEISPKLNPKPPXXXXXXXXXXXXXXXXXTVIESKKAAMAPEKEKSEK 300
           NGNWWRFPTVDVVEISPKLNPKP XXXXXXXXXXXXXXXXX VIESKKAAMAPEKEKSEK
Sbjct: 241 NGNWWRFPTVDVVEISPKLNPKPXXXXXXXXXXXXXXXXXXXVIESKKAAMAPEKEKSEK 300

Query: 301 PIPKGLVLKLNYEAVADAWSNRGSPFSDEIPASDTAGSDVNARLAQIDLFSDGGGLLREA 360
           PIPKGLVLKLNYEAVADAWSNRGSPFSDE PASDTAGSDVNARLA IDLFSDGGG LREA
Sbjct: 301 PIPKGLVLKLNYEAVADAWSNRGSPFSDEFPASDTAGSDVNARLALIDLFSDGGGFLREA 360

Query: 361 SVLRYKEKKRTRLFSKKIRYQVRKVNADGRPRMKGRFVRRPNSSASQQR 410
           SVLRYKEKKRTRLFSKKIRYQVRKVNADGRPRMKGRFVRRPNSSASQQR
Sbjct: 361 SVLRYKEKKRTRLFSKKIRYQVRKVNADGRPRMKGRFVRRPNSSASQQR 408

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BLAST of Carg23937 vs. NCBI nr
Match: XP_022929701.1 (protein CHLOROPLAST IMPORT APPARATUS 2-like [Cucurbita moschata])

HSP 1 Score: 700.3 bits (1806), Expect = 3.9e-198
Identity = 395/409 (96.58%), Postives = 397/409 (97.07%), Query Frame = 0


Query: 1   MSSPCISGGGRAYSFDLEIVKSPSSSWTRXXXXXXXXXXXXXXXXXXXXXLAISTRKSRT 60
           MSSPCISGGGRAYSFDLEIVKSPSSSWTR    XXXXXXXXXXXXXXXX LAISTRKSRT
Sbjct: 1   MSSPCISGGGRAYSFDLEIVKSPSSSWTR-TSQXXXXXXXXXXXXXXXXQLAISTRKSRT 60

Query: 61  PRKRPNQTYNEATLLLSTAYPNVFSAKHLTNPRKFTKSHDSLFSDSAELLLPFRGIDSSE 120
           PRKRPNQTYNEATLLLSTAYPNVFSAKHLTNPRKFTKSHDSLFSDSAELLLPFRGIDSSE
Sbjct: 61  PRKRPNQTYNEATLLLSTAYPNVFSAKHLTNPRKFTKSHDSLFSDSAELLLPFRGIDSSE 120

Query: 121 FLIHQPLEKPNSQIHSKLANLWENRPCSSPGEVDFQPDSMEMEDFDAESILDEEIEEGID 180
           FLIHQP EKPNSQIHSKLANLWENRPCSSPGEVDFQPDSMEMEDFDAESILDEEIEEGID
Sbjct: 121 FLIHQPPEKPNSQIHSKLANLWENRPCSSPGEVDFQPDSMEMEDFDAESILDEEIEEGID 180

Query: 181 SILGNLCVDNLETGDSVQDSCANNHPWNCNCPWNPIGLGGLNQKFESGHGIERTAIREVD 240
           SILGNLCVDNLETGDSVQDSCANNHPWN NC WNPIGLGGLNQKFESG+GIERTAIREVD
Sbjct: 181 SILGNLCVDNLETGDSVQDSCANNHPWNWNCSWNPIGLGGLNQKFESGYGIERTAIREVD 240

Query: 241 NGNWWRFPTVDVVEISPKLNPKPPXXXXXXXXXXXXXXXXXTVIESKKAAMAPEKEKSEK 300
           NGNWWRFPTVDVVEISPKLNPKP XXXXXXXXXXXXXXXXX VIESKKAAMAPEKEKSEK
Sbjct: 241 NGNWWRFPTVDVVEISPKLNPKPXXXXXXXXXXXXXXXXXXXVIESKKAAMAPEKEKSEK 300

Query: 301 PIPKGLVLKLNYEAVADAWSNRGSPFSDEIPASDTAGSDVNARLAQIDLFSDGGGLLREA 360
            IPKGLVLKLNYEAVADAWSNRGSPFSDEIPA+DT GSDVNARLAQIDLFSDGGGLLREA
Sbjct: 301 QIPKGLVLKLNYEAVADAWSNRGSPFSDEIPATDT-GSDVNARLAQIDLFSDGGGLLREA 360

Query: 361 SVLRYKEKKRTRLFSKKIRYQVRKVNADGRPRMKGRFVRRPNSSASQQR 410
           SVLRYKEKKRTRLFSKKIRYQVRKVNADGRPRMKGRFVRRPNSSASQQR
Sbjct: 361 SVLRYKEKKRTRLFSKKIRYQVRKVNADGRPRMKGRFVRRPNSSASQQR 407

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BLAST of Carg23937 vs. NCBI nr
Match: XP_023546862.1 (protein CHLOROPLAST IMPORT APPARATUS 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 691.4 bits (1783), Expect = 1.8e-195
Identity = 391/413 (94.67%), Postives = 394/413 (95.40%), Query Frame = 0


Query: 1   MSSPCISGGGRAYSFDLEIVKSPSSSWTRXXXXXXXXXXXXXXXXXXXXXLAISTRKSRT 60
           MSSPCISGGGRAYSFDLEIVKSPSSSWTR    XXXXXXXXXXXXXXXX LAISTRKSRT
Sbjct: 1   MSSPCISGGGRAYSFDLEIVKSPSSSWTR-TSQXXXXXXXXXXXXXXXXQLAISTRKSRT 60

Query: 61  PRKRPNQTYNEATLLLSTAYPNVFSAKHLTNPRKFTKSHDSLFSDSAELLLPFRGIDSSE 120
           PRKRPNQTYNEATLLLSTAYPNVFSAKHLTNPRKFTKSHDSLFSDSAELLLPFRGIDSSE
Sbjct: 61  PRKRPNQTYNEATLLLSTAYPNVFSAKHLTNPRKFTKSHDSLFSDSAELLLPFRGIDSSE 120

Query: 121 FLIHQPLEKPNSQIHSKLANLWENRPCSSPGEVDFQPDSMEMEDFDAESILDEEIEEGID 180
           FLIHQPLEKP+SQIHSKLANLWENRPCSS GEVDFQPDSMEMEDFDAESILDEEIEEGID
Sbjct: 121 FLIHQPLEKPSSQIHSKLANLWENRPCSSQGEVDFQPDSMEMEDFDAESILDEEIEEGID 180

Query: 181 SILGNLCVDNLETGDSVQDSCANNHPWNCNCPWNPIGLGGLNQKFESGHGIERTAIREVD 240
           SILGNLCVDNLETGDSVQDSCANNHPWN NC WNPIGLGGLNQKFESG+GIERTAIREVD
Sbjct: 181 SILGNLCVDNLETGDSVQDSCANNHPWNWNCSWNPIGLGGLNQKFESGYGIERTAIREVD 240

Query: 241 NGNWWRFPTVDVVEISPKLNP----KPPXXXXXXXXXXXXXXXXXTVIESKKAAMAPEKE 300
           NGNWWRFPTVDVVEISPKLNP       XXXXXXXXXXXXXXX  TVIESKKAAMAPEKE
Sbjct: 241 NGNWWRFPTVDVVEISPKLNPXXXXXXXXXXXXXXXXXXXXXXKLTVIESKKAAMAPEKE 300

Query: 301 KSEKPIPKGLVLKLNYEAVADAWSNRGSPFSDEIPASDTAGSDVNARLAQIDLFSDGGGL 360
           KSEK I KGLVLKLNYEAVADAWSNRGSPFSDEIPAS+TAGSDVNARLAQIDLFSDGGGL
Sbjct: 301 KSEKSIAKGLVLKLNYEAVADAWSNRGSPFSDEIPASNTAGSDVNARLAQIDLFSDGGGL 360

Query: 361 LREASVLRYKEKKRTRLFSKKIRYQVRKVNADGRPRMKGRFVRRPNSSASQQR 410
           LREASVLRYKEKKRTRLFSKKIRYQVRKVNADGRPRMKGRFVRRPNSSASQQR
Sbjct: 361 LREASVLRYKEKKRTRLFSKKIRYQVRKVNADGRPRMKGRFVRRPNSSASQQR 412

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BLAST of Carg23937 vs. NCBI nr
Match: XP_011648958.1 (PREDICTED: protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 [Cucumis sativus] >KGN61175.1 hypothetical protein Csa_2G061540 [Cucumis sativus])

HSP 1 Score: 582.8 bits (1501), Expect = 9.1e-163
Identity = 338/432 (78.24%), Postives = 358/432 (82.87%), Query Frame = 0


Query: 1   MSSPCISGGGRAYSFDLEIVKSPSSSWTRXXXXXXXXXXXXXXXXXXXXXLAISTRKSRT 60
           MSSPCISGGGRAY+FDLEI+KSPSSSWTR                     LAISTRK RT
Sbjct: 1   MSSPCISGGGRAYNFDLEILKSPSSSWTR-TSQTSSPSSTLSESSNNTTQLAISTRKLRT 60

Query: 61  PRKRPNQTYNEATLLLSTAYPNVFSAKHLTNPRKFTKSHD---SLFSDSAELLLPFRGID 120
           PRKRPNQTYNEAT+LLSTAYPNVFS KHLTNPRKFTKSHD   SLF +SAELLLPFR ID
Sbjct: 61  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSSSLFCESAELLLPFRVID 120

Query: 121 SSEFLIHQPL--EKPNSQIHSKLANLWENRPCSSPGEVDFQPDSM---EMEDFDAESILD 180
           SS FL+HQPL  EKPNSQIHSKL NLWENRPCSSPGE+DFQP+SM   E+EDFDAESILD
Sbjct: 121 SSGFLLHQPLLEEKPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESILD 180

Query: 181 EEIEEGIDSILGNLCVDNLETGDSVQDSC--ANNHPWNCNCPWNPIGLGGLNQKFESG-- 240
           EEIEEGIDSI+GNL VDNLE G+S QDSC  ANNHP N N  WNPIGL G NQKFESG  
Sbjct: 181 EEIEEGIDSIMGNLSVDNLEKGNSTQDSCVNANNHPRNWN--WNPIGL-GFNQKFESGFG 240

Query: 241 --HGIERTAIREVDNGNWWRFPTVDVVEISPKLNP----------KPPXXXXXXXXXXXX 300
              GIERTAIR VDNGNWWRFPTVDV+EISPKLNP             XXXXXXXXXXXX
Sbjct: 241 FRKGIERTAIRGVDNGNWWRFPTVDVIEISPKLNPXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXTVIESKKAAMAPEKEKSEKPIPK----GLVLKLNYEAVADAWSNRGSPFSDEIPA 360
           XXX  TVIESKKAA+  +KEKSEKPIPK    GL+LKLNYEAVADAWS+RGSPFSDEIP+
Sbjct: 301 XXXKLTVIESKKAAIPLQKEKSEKPIPKLKPTGLLLKLNYEAVADAWSSRGSPFSDEIPS 360

Query: 361 SDTAGSDVNARLAQIDLFSDGGGLLREASVLRYKEKKRTRLFSKKIRYQVRKVNADGRPR 405
           SDTAGSDVNAR+A IDLF++GGGLLREASVLRYKEK+RTRLFSKKIRYQVRKVNADGRPR
Sbjct: 361 SDTAGSDVNARVANIDLFTEGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPR 420

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BLAST of Carg23937 vs. NCBI nr
Match: XP_008451201.1 (PREDICTED: protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 [Cucumis melo])

HSP 1 Score: 576.6 bits (1485), Expect = 6.5e-161
Identity = 339/439 (77.22%), Postives = 359/439 (81.78%), Query Frame = 0


Query: 1   MSSPCISGGGRAYSFDLEIVKSPSSSWTRXXXXXXXXXXXXXXXXXXXXXLAISTRKSRT 60
           MSSPCISGGGRAY+FDLEIVKSPSSSWTR                     LAISTRK RT
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTR-TSQTSSPSSTLSESSNNTTQLAISTRKLRT 60

Query: 61  PRKRPNQTYNEATLLLSTAYPNVFSAKHLTNPRKFTKSHD---SLFSDSAELLLPFRGID 120
           PRKRPNQTYNEAT+LLSTAYPNVFS KHLTNPRKFTKSHD   SLF +SAELLLPFR ID
Sbjct: 61  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSSSLFCESAELLLPFRVID 120

Query: 121 SSEFLIHQPL--EKPNSQIHSKLANLWENRPCSSPGEVDFQPDSM---EMEDFDAESILD 180
           SS FL+HQPL  EKPNSQIHSKL NLWENRPCSSPGE+DFQP+SM   E+EDFDAESILD
Sbjct: 121 SSGFLLHQPLLEEKPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESILD 180

Query: 181 EEIEEGIDSILGNLCVDNLETGDSVQDSC--ANNHPWNCNCPWNPIGLGGLNQKFESG-- 240
           EEIEEGIDSI+GNL VDNLE G+S QDSC  ANNH  N N  WNPIGL G NQKFESG  
Sbjct: 181 EEIEEGIDSIMGNLSVDNLENGNSTQDSCVNANNHQRNWN--WNPIGL-GFNQKFESGFG 240

Query: 241 --HGIERTAIREVDNGNWWRFPTVDVVEISPKLNP----------KPPXXXXXXXXXXXX 300
              GIERTAIR VDNGNWWRFPTVDV+EISPKLNP             XXXXXXXXXXXX
Sbjct: 241 FRKGIERTAIRGVDNGNWWRFPTVDVIEISPKLNPXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXTVIESKKAAMAPEK---EKSEKPIPK----GLVLKLNYEAVADAWSNRGSPFSDE 360
           XXX  TVIESKKAA+  +K   EKSEKPIPK    GL+LKLNYEAVADAWS+RGSPFSDE
Sbjct: 301 XXXKLTVIESKKAAIPLQKEKSEKSEKPIPKLKPAGLLLKLNYEAVADAWSSRGSPFSDE 360

Query: 361 IPASDTAGSDVNARLAQIDLFSDGGGLLREASVLRYKEKKRTRLFSKKIRYQVRKVNADG 409
           IP+SDTAGSDVNARLA IDLF++GGGLLREASVLRYKEK+RTRLFSKKIRYQVRKVNADG
Sbjct: 361 IPSSDTAGSDVNARLANIDLFTEGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADG 420

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BLAST of Carg23937 vs. TAIR10
Match: AT4G25990.2 (CCT motif family protein)

HSP 1 Score: 228.0 bits (580), Expect = 1.0e-59
Identity = 186/439 (42.37%), Postives = 243/439 (55.35%), Query Frame = 0


Query: 12  AYSFDLEIVKSPSSSWTRXXXXXXXXXXXXXXXXXXXXXLAISTRKSRTPRKRPNQTYNE 71
           AYSF+LE++KSP S+ T                       +ISTR+ RTPRKRPNQTY+E
Sbjct: 5   AYSFELEMMKSPPSNNT--------PSPSSTISETNSPPFSISTRRPRTPRKRPNQTYDE 64

Query: 72  ATLLLSTAYPNVFSAKHL-TNPRKFTKSHDSLFSDSAELLLPFRGIDSSEFLIHQPLEKP 131
           A  LLSTAYP +FS+K   T      KS  S + ++++LLLP+  I+ +EFL        
Sbjct: 65  AAALLSTAYPKIFSSKKAKTQIFGTNKSPLSDYDEASQLLLPYVSIEENEFLF------- 124

Query: 132 NSQIHSKLANLWENRPCSSPGEVDFQPDSME------MEDFDAESILDEEIEEGIDSILG 191
           N  I +K  +  E +      EV F  D +E      ++DFDAESILDEEIEEGIDS +G
Sbjct: 125 NPTIPTKTEHFLEQK------EVSF--DDLEVNGFGVLDDFDAESILDEEIEEGIDSFMG 184

Query: 192 NLCVDNLETGDSVQDSCANNHPWNCNCPWNPIGLGGLNQKFESGHGIERTAIREVDNGNW 251
                N+E+ D  +++C              I     N +F  G G+ R+++R+ ++ NW
Sbjct: 185 -----NIESNDGDRENCYRVG------RLEEIMKNAWNGRFRLGLGL-RSSLRQNNDENW 244

Query: 252 WRFPTVDVVEISPKLN-------------------------PKPPXXXXXXXXXXXXXXX 311
           W+FPTV+  +ISP++                              XXXXXXXXXXXXXXX
Sbjct: 245 WKFPTVEFDQISPRIQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 304

Query: 312 XXTVIESKKAAMAPEKEKSEKPIPKGLVLKLNYEAVADAWSNRGSPFSDEIPASDTAGSD 371
           XX     +     P+ E+   P+     LKL+Y+ V +AWS + SPFSDEI  SD  G D
Sbjct: 305 XXXXXXXEVTDSNPKLEQRVSPL-----LKLDYDGVLEAWSGKESPFSDEILGSDADGVD 364

Query: 372 VNARLAQIDLFSDGGGLLREASVLRYKEKKRTRLFSKKIRYQVRKVNADGRPRMK----- 404
            + RL +IDLF + G  +REASVLRYKEK+R RLFSKKIRYQVRK+NAD RPRMK     
Sbjct: 365 FHVRLGEIDLFGESG--MREASVLRYKEKRRNRLFSKKIRYQVRKLNADQRPRMKVKDWH 401

[Close]

BLAST of Carg23937 vs. TAIR10
Match: AT5G57180.2 (chloroplast import apparatus 2)

HSP 1 Score: 225.3 bits (573), Expect = 6.7e-59
Identity = 183/393 (46.56%), Postives = 230/393 (58.52%), Query Frame = 0


Query: 51  LAISTRKSRTPRKRPNQTYNEATLLLSTAYPNVFSAKHLTNPRKFTKSHDSLF------- 110
           LAISTRK RT RKRPNQTYNEA  LLSTAYPN+FS+ +L++ +K   S +S F       
Sbjct: 51  LAISTRKPRTQRKRPNQTYNEAATLLSTAYPNIFSS-NLSSKQKTHSSSNSHFYGPLLSD 110

Query: 111 -SDSAELLLPFRGIDSSEFLIHQPLEKPNSQIHSKLANLWENRPCSSPGEVDFQPDSMEM 170
             D+++LLLP+  I+  +FL H P  +  ++  S    +     C   GE++    S   
Sbjct: 111 NDDASDLLLPYESIEEPDFLFH-PTIQTKTEFFSDQKEVNSGGDCYG-GEIEKFDFS--- 170

Query: 171 EDFDAESILDEEIEEGIDSILGNLCVDNLET--------------GDSVQDSCANNHPWN 230
           ++FDAESILDE+IEEGIDSI+G +   N  +              G S  +         
Sbjct: 171 DEFDAESILDEDIEEGIDSIMGTVVESNSNSGIYESRVPGMINRGGRSSSNRIGKLEQMM 230

Query: 231 CNCPWNPIGLGGLNQKFESGHGIERTAIREVDNGNWWRFPTVDVVEISPKLN-------- 290
               WN     G N  F  G G+ R+A+RE D+   W+  TVD  +ISP++         
Sbjct: 231 MINSWNR-SSNGFN--FPLGLGL-RSALRENDDTKLWKIHTVDFEQISPRIQTVKTETAI 290

Query: 291 -------PKPPXXXXXXXXXXXXXXXXXTVIESKKAAMAPEKEKSEKPIPK--GLVLKLN 350
                      XXXXXXXXXXXXXXXXX          +   E +E+   K  G +LKL+
Sbjct: 291 STVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKSLEDTEETSLKRTGPLLKLD 350

Query: 351 YEAVADAWSNRGSPFSDEIPASDTAGSDVNARLAQIDLFSDGGGLLREASVLRYKEKKRT 405
           Y+ V +AWS++ SPF DEI  S+    DVNARLAQIDLF D G  +REASVLRYKEK+RT
Sbjct: 351 YDGVLEAWSDKTSPFPDEIQGSEAV--DVNARLAQIDLFGDSG--MREASVLRYKEKRRT 410

[Close]

BLAST of Carg23937 vs. TAIR10
Match: AT1G07050.1 (CCT motif family protein)

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-18
Identity = 50/96 (52.08%), Postives = 66/96 (68.75%), Query Frame = 0


Query: 305 GLVLKLNYEAVADAWSNRGSPFSDEIPASDTAGSDVNARLAQIDLFSDGGGLLREASVLR 364
           GL L LN++ V DAWS+   P       +DT+  D +    ++ +  +   + REASVLR
Sbjct: 103 GLKLNLNHQEVIDAWSDHQKPL-----WTDTSTLDNSVYRGEVPVIEEKRNMRREASVLR 162

Query: 365 YKEKKRTRLFSKKIRYQVRKVNADGRPRMKGRFVRR 401
           YKEK+++RLFSKKIRYQVRK+NAD RPR KGRFV+R
Sbjct: 163 YKEKRQSRLFSKKIRYQVRKLNADKRPRFKGRFVKR 193

[Close]

BLAST of Carg23937 vs. TAIR10
Match: AT1G25440.1 (B-box type zinc finger protein with CCT domain)

HSP 1 Score: 85.5 bits (210), Expect = 8.3e-17
Identity = 56/142 (39.44%), Postives = 78/142 (54.93%), Query Frame = 0


Query: 284 IESKKAAMAPEKEKSEKPIPKGLVLKLNYEAVADAWSNRGSPFSDEIPAS---------- 343
           +ES    +   KE+  K +   L+L+LNY++V   W  +G P+S   P            
Sbjct: 274 VESSGECVVKVKEEEHKNV---LMLRLNYDSVISTWGGQGPPWSSGEPPERDMDISGWPA 333

Query: 344 ----DTAGSDVNAR-----LAQIDLFSDGGGLLREASVLRYKEKKRTRLFSKKIRYQVRK 403
               +  G   + +           F DGG   REA V RY+EK+RTRLFSKKIRY+VRK
Sbjct: 334 FSMVENGGESTHQKQYVGGCLPSSGFGDGG---REARVSRYREKRRTRLFSKKIRYEVRK 393

Query: 404 VNADGRPRMKGRFVRRPNSSAS 407
           +NA+ RPRMKGRFV+R + +A+
Sbjct: 394 LNAEKRPRMKGRFVKRASLAAA 409

[Close]

BLAST of Carg23937 vs. TAIR10
Match: AT5G14370.1 (CCT motif family protein)

HSP 1 Score: 85.5 bits (210), Expect = 8.3e-17
Identity = 54/116 (46.55%), Postives = 72/116 (62.07%), Query Frame = 0


Query: 306 LVLKLNYEAVADAWSNRGSPFSDEIPASDTAGSDVNARLAQIDLFSDGG--GLL------ 365
           L LKL+YE + +AWS++G+ + D  P         +A     D F+DGG  G L      
Sbjct: 229 LALKLDYEQIMEAWSDKGTLYVDGEPPQTVPDLHASA-----DGFNDGGEAGNLWAVPEM 288

Query: 366 ----------REASVLRYKEKKRTRLFSKKIRYQVRKVNADGRPRMKGRFVRRPNS 404
                     REAS+LRYKEK++ RLFSK+IRYQVRK+NA+ RPR+KGRFV+R +S
Sbjct: 289 ETTERLWRGHREASLLRYKEKRQNRLFSKRIRYQVRKLNAEKRPRVKGRFVKREDS 339

[Close]

BLAST of Carg23937 vs. Swiss-Prot
Match: sp|Q9LU68|CIA2_ARATH (Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana OX=3702 GN=CIA2 PE=1 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.2e-57
Identity = 183/393 (46.56%), Postives = 230/393 (58.52%), Query Frame = 0


Query: 51  LAISTRKSRTPRKRPNQTYNEATLLLSTAYPNVFSAKHLTNPRKFTKSHDSLF------- 110
           LAISTRK RT RKRPNQTYNEA  LLSTAYPN+FS+ +L++ +K   S +S F       
Sbjct: 51  LAISTRKPRTQRKRPNQTYNEAATLLSTAYPNIFSS-NLSSKQKTHSSSNSHFYGPLLSD 110

Query: 111 -SDSAELLLPFRGIDSSEFLIHQPLEKPNSQIHSKLANLWENRPCSSPGEVDFQPDSMEM 170
             D+++LLLP+  I+  +FL H P  +  ++  S    +     C   GE++    S   
Sbjct: 111 NDDASDLLLPYESIEEPDFLFH-PTIQTKTEFFSDQKEVNSGGDCYG-GEIEKFDFS--- 170

Query: 171 EDFDAESILDEEIEEGIDSILGNLCVDNLET--------------GDSVQDSCANNHPWN 230
           ++FDAESILDE+IEEGIDSI+G +   N  +              G S  +         
Sbjct: 171 DEFDAESILDEDIEEGIDSIMGTVVESNSNSGIYESRVPGMINRGGRSSSNRIGKLEQMM 230

Query: 231 CNCPWNPIGLGGLNQKFESGHGIERTAIREVDNGNWWRFPTVDVVEISPKLN-------- 290
               WN     G N  F  G G+ R+A+RE D+   W+  TVD  +ISP++         
Sbjct: 231 MINSWNR-SSNGFN--FPLGLGL-RSALRENDDTKLWKIHTVDFEQISPRIQTVKTETAI 290

Query: 291 -------PKPPXXXXXXXXXXXXXXXXXTVIESKKAAMAPEKEKSEKPIPK--GLVLKLN 350
                      XXXXXXXXXXXXXXXXX          +   E +E+   K  G +LKL+
Sbjct: 291 STVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKSLEDTEETSLKRTGPLLKLD 350

Query: 351 YEAVADAWSNRGSPFSDEIPASDTAGSDVNARLAQIDLFSDGGGLLREASVLRYKEKKRT 405
           Y+ V +AWS++ SPF DEI  S+    DVNARLAQIDLF D G  +REASVLRYKEK+RT
Sbjct: 351 YDGVLEAWSDKTSPFPDEIQGSEAV--DVNARLAQIDLFGDSG--MREASVLRYKEKRRT 410

[Close]

BLAST of Carg23937 vs. Swiss-Prot
Match: sp|Q8RWD0|COL16_ARATH (Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE=1 SV=2)

HSP 1 Score: 85.5 bits (210), Expect = 1.5e-15
Identity = 56/142 (39.44%), Postives = 78/142 (54.93%), Query Frame = 0


Query: 284 IESKKAAMAPEKEKSEKPIPKGLVLKLNYEAVADAWSNRGSPFSDEIPAS---------- 343
           +ES    +   KE+  K +   L+L+LNY++V   W  +G P+S   P            
Sbjct: 274 VESSGECVVKVKEEEHKNV---LMLRLNYDSVISTWGGQGPPWSSGEPPERDMDISGWPA 333

Query: 344 ----DTAGSDVNAR-----LAQIDLFSDGGGLLREASVLRYKEKKRTRLFSKKIRYQVRK 403
               +  G   + +           F DGG   REA V RY+EK+RTRLFSKKIRY+VRK
Sbjct: 334 FSMVENGGESTHQKQYVGGCLPSSGFGDGG---REARVSRYREKRRTRLFSKKIRYEVRK 393

Query: 404 VNADGRPRMKGRFVRRPNSSAS 407
           +NA+ RPRMKGRFV+R + +A+
Sbjct: 394 LNAEKRPRMKGRFVKRASLAAA 409

[Close]

BLAST of Carg23937 vs. Swiss-Prot
Match: sp|Q9C9A9|COL7_ARATH (Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 3.3e-15
Identity = 56/119 (47.06%), Postives = 69/119 (57.98%), Query Frame = 0


Query: 298 SEKPIPKGLVLKLNYEAVADAWSNRGSPFSDEIPASDTAGSDV--------NARLAQID- 357
           ++K     L L+L+Y AV  AW N GSP+   I      G +           +L   D 
Sbjct: 269 NDKDRKTSLFLRLDYGAVISAWDNHGSPWKTGIKPECMLGGNTCLPHVVGGYEKLMSSDG 328

Query: 358 -----LFSDGGGL--LREASVLRYKEKKRTRLFSKKIRYQVRKVNADGRPRMKGRFVRR 401
                   DGGG    REA VLRYKEK+RTRLFSKKIRY+VRK+NA+ RPR+KGRFV+R
Sbjct: 329 SVTRQQGRDGGGSDGEREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRIKGRFVKR 387

[Close]

BLAST of Carg23937 vs. Swiss-Prot
Match: sp|Q8LG76|COL6_ARATH (Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2 SV=2)

HSP 1 Score: 81.6 bits (200), Expect = 2.2e-14
Identity = 52/123 (42.28%), Postives = 73/123 (59.35%), Query Frame = 0


Query: 294 EKEKSEKPIPKGLVLKLNYEAVADAWSNRGSPFSDEIPAS-------------DTAGSDV 353
           ++EK E    K L+L+L+YE+V   W  +G P++  +P+                +G++ 
Sbjct: 281 KEEKKE----KALMLRLDYESVISTWGGQGIPWTARVPSEIDLDMVCFPTHTMGESGAEA 340

Query: 354 NARLAQIDL---FSDGGGLLREASVLRYKEKKRTRLFSKKIRYQVRKVNADGRPRMKGRF 401
           +       L     D G   REA V RY+EK+RTRLFSKKIRY+VRK+NA+ RPRMKGRF
Sbjct: 341 HHHNHFRGLGLHLGDAGDGGREARVSRYREKRRTRLFSKKIRYEVRKLNAEKRPRMKGRF 399

[Close]

BLAST of Carg23937 vs. Swiss-Prot
Match: sp|Q9M9B3|COL8_ARATH (Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1 SV=2)

HSP 1 Score: 66.6 bits (161), Expect = 7.2e-10
Identity = 33/43 (76.74%), Postives = 38/43 (88.37%), Query Frame = 0


Query: 358 REASVLRYKEKKRTRLFSKKIRYQVRKVNADGRPRMKGRFVRR 401
           REA V RY++K++ RLF KKIRY+VRKVNAD RPRMKGRFVRR
Sbjct: 271 REARVWRYRDKRKNRLFEKKIRYEVRKVNADKRPRMKGRFVRR 313

[Close]

BLAST of Carg23937 vs. TrEMBL
Match: tr|A0A0A0LGV4|A0A0A0LGV4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G061540 PE=4 SV=1)

HSP 1 Score: 582.8 bits (1501), Expect = 6.0e-163
Identity = 338/432 (78.24%), Postives = 358/432 (82.87%), Query Frame = 0


Query: 1   MSSPCISGGGRAYSFDLEIVKSPSSSWTRXXXXXXXXXXXXXXXXXXXXXLAISTRKSRT 60
           MSSPCISGGGRAY+FDLEI+KSPSSSWTR                     LAISTRK RT
Sbjct: 1   MSSPCISGGGRAYNFDLEILKSPSSSWTR-TSQTSSPSSTLSESSNNTTQLAISTRKLRT 60

Query: 61  PRKRPNQTYNEATLLLSTAYPNVFSAKHLTNPRKFTKSHD---SLFSDSAELLLPFRGID 120
           PRKRPNQTYNEAT+LLSTAYPNVFS KHLTNPRKFTKSHD   SLF +SAELLLPFR ID
Sbjct: 61  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSSSLFCESAELLLPFRVID 120

Query: 121 SSEFLIHQPL--EKPNSQIHSKLANLWENRPCSSPGEVDFQPDSM---EMEDFDAESILD 180
           SS FL+HQPL  EKPNSQIHSKL NLWENRPCSSPGE+DFQP+SM   E+EDFDAESILD
Sbjct: 121 SSGFLLHQPLLEEKPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESILD 180

Query: 181 EEIEEGIDSILGNLCVDNLETGDSVQDSC--ANNHPWNCNCPWNPIGLGGLNQKFESG-- 240
           EEIEEGIDSI+GNL VDNLE G+S QDSC  ANNHP N N  WNPIGL G NQKFESG  
Sbjct: 181 EEIEEGIDSIMGNLSVDNLEKGNSTQDSCVNANNHPRNWN--WNPIGL-GFNQKFESGFG 240

Query: 241 --HGIERTAIREVDNGNWWRFPTVDVVEISPKLNP----------KPPXXXXXXXXXXXX 300
              GIERTAIR VDNGNWWRFPTVDV+EISPKLNP             XXXXXXXXXXXX
Sbjct: 241 FRKGIERTAIRGVDNGNWWRFPTVDVIEISPKLNPXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXTVIESKKAAMAPEKEKSEKPIPK----GLVLKLNYEAVADAWSNRGSPFSDEIPA 360
           XXX  TVIESKKAA+  +KEKSEKPIPK    GL+LKLNYEAVADAWS+RGSPFSDEIP+
Sbjct: 301 XXXKLTVIESKKAAIPLQKEKSEKPIPKLKPTGLLLKLNYEAVADAWSSRGSPFSDEIPS 360

Query: 361 SDTAGSDVNARLAQIDLFSDGGGLLREASVLRYKEKKRTRLFSKKIRYQVRKVNADGRPR 405
           SDTAGSDVNAR+A IDLF++GGGLLREASVLRYKEK+RTRLFSKKIRYQVRKVNADGRPR
Sbjct: 361 SDTAGSDVNARVANIDLFTEGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADGRPR 420

[Close]

BLAST of Carg23937 vs. TrEMBL
Match: tr|A0A1S3BQX8|A0A1S3BQX8_CUCME (protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492569 PE=4 SV=1)

HSP 1 Score: 576.6 bits (1485), Expect = 4.3e-161
Identity = 339/439 (77.22%), Postives = 359/439 (81.78%), Query Frame = 0


Query: 1   MSSPCISGGGRAYSFDLEIVKSPSSSWTRXXXXXXXXXXXXXXXXXXXXXLAISTRKSRT 60
           MSSPCISGGGRAY+FDLEIVKSPSSSWTR                     LAISTRK RT
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTR-TSQTSSPSSTLSESSNNTTQLAISTRKLRT 60

Query: 61  PRKRPNQTYNEATLLLSTAYPNVFSAKHLTNPRKFTKSHD---SLFSDSAELLLPFRGID 120
           PRKRPNQTYNEAT+LLSTAYPNVFS KHLTNPRKFTKSHD   SLF +SAELLLPFR ID
Sbjct: 61  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSSSLFCESAELLLPFRVID 120

Query: 121 SSEFLIHQPL--EKPNSQIHSKLANLWENRPCSSPGEVDFQPDSM---EMEDFDAESILD 180
           SS FL+HQPL  EKPNSQIHSKL NLWENRPCSSPGE+DFQP+SM   E+EDFDAESILD
Sbjct: 121 SSGFLLHQPLLEEKPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESILD 180

Query: 181 EEIEEGIDSILGNLCVDNLETGDSVQDSC--ANNHPWNCNCPWNPIGLGGLNQKFESG-- 240
           EEIEEGIDSI+GNL VDNLE G+S QDSC  ANNH  N N  WNPIGL G NQKFESG  
Sbjct: 181 EEIEEGIDSIMGNLSVDNLENGNSTQDSCVNANNHQRNWN--WNPIGL-GFNQKFESGFG 240

Query: 241 --HGIERTAIREVDNGNWWRFPTVDVVEISPKLNP----------KPPXXXXXXXXXXXX 300
              GIERTAIR VDNGNWWRFPTVDV+EISPKLNP             XXXXXXXXXXXX
Sbjct: 241 FRKGIERTAIRGVDNGNWWRFPTVDVIEISPKLNPXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXTVIESKKAAMAPEK---EKSEKPIPK----GLVLKLNYEAVADAWSNRGSPFSDE 360
           XXX  TVIESKKAA+  +K   EKSEKPIPK    GL+LKLNYEAVADAWS+RGSPFSDE
Sbjct: 301 XXXKLTVIESKKAAIPLQKEKSEKSEKPIPKLKPAGLLLKLNYEAVADAWSSRGSPFSDE 360

Query: 361 IPASDTAGSDVNARLAQIDLFSDGGGLLREASVLRYKEKKRTRLFSKKIRYQVRKVNADG 409
           IP+SDTAGSDVNARLA IDLF++GGGLLREASVLRYKEK+RTRLFSKKIRYQVRKVNADG
Sbjct: 361 IPSSDTAGSDVNARLANIDLFTEGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADG 420

[Close]

BLAST of Carg23937 vs. TrEMBL
Match: tr|A0A1S3BQD2|A0A1S3BQD2_CUCME (protein CHLOROPLAST IMPORT APPARATUS 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492569 PE=4 SV=1)

HSP 1 Score: 558.1 bits (1437), Expect = 1.6e-155
Identity = 329/425 (77.41%), Postives = 347/425 (81.65%), Query Frame = 0


Query: 1   MSSPCISGGGRAYSFDLEIVKSPSSSWTRXXXXXXXXXXXXXXXXXXXXXLAISTRKSRT 60
           MSSPCISGGGRAY+FDLEIVKSPSSSWTR                     LAISTRK RT
Sbjct: 1   MSSPCISGGGRAYNFDLEIVKSPSSSWTR-TSQTSSPSSTLSESSNNTTQLAISTRKLRT 60

Query: 61  PRKRPNQTYNEATLLLSTAYPNVFSAKHLTNPRKFTKSHD---SLFSDSAELLLPFRGID 120
           PRKRPNQTYNEAT+LLSTAYPNVFS KHLTNPRKFTKSHD   SLF +SAELLLPFR ID
Sbjct: 61  PRKRPNQTYNEATVLLSTAYPNVFSTKHLTNPRKFTKSHDDSSSLFCESAELLLPFRVID 120

Query: 121 SSEFLIHQPL--EKPNSQIHSKLANLWENRPCSSPGEVDFQPDSM---EMEDFDAESILD 180
           SS FL+HQPL  EKPNSQIHSKL NLWENRPCSSPGE+DFQP+SM   E+EDFDAESILD
Sbjct: 121 SSGFLLHQPLLEEKPNSQIHSKLTNLWENRPCSSPGEIDFQPNSMEIEEIEDFDAESILD 180

Query: 181 EEIEEGIDSILGNLCVDNLETGDSVQDSC--ANNHPWNCNCPWNPIGLGGLNQKFESG-- 240
           EEIEEGIDSI+GNL VDNLE G+S QDSC  ANNH  N N  WNPIGL G NQKFESG  
Sbjct: 181 EEIEEGIDSIMGNLSVDNLENGNSTQDSCVNANNHQRNWN--WNPIGL-GFNQKFESGFG 240

Query: 241 --HGIERTAIREVDNGNWWRFPTVDVVEISPKLNP----------KPPXXXXXXXXXXXX 300
              GIERTAIR VDNGNWWRFPTVDV+EISPKLNP             XXXXXXXXXXXX
Sbjct: 241 FRKGIERTAIRGVDNGNWWRFPTVDVIEISPKLNPXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXTVIESKKAAMAPEK---EKSEKPIPK----GLVLKLNYEAVADAWSNRGSPFSDE 360
           XXX  TVIESKKAA+  +K   EKSEKPIPK    GL+LKLNYEAVADAWS+RGSPFSDE
Sbjct: 301 XXXKLTVIESKKAAIPLQKEKSEKSEKPIPKLKPAGLLLKLNYEAVADAWSSRGSPFSDE 360

Query: 361 IPASDTAGSDVNARLAQIDLFSDGGGLLREASVLRYKEKKRTRLFSKKIRYQVRKVNADG 395
           IP+SDTAGSDVNARLA IDLF++GGGLLREASVLRYKEK+RTRLFSKKIRYQVRKVNADG
Sbjct: 361 IPSSDTAGSDVNARLANIDLFTEGGGLLREASVLRYKEKRRTRLFSKKIRYQVRKVNADG 420

[Close]

BLAST of Carg23937 vs. TrEMBL
Match: tr|A0A2I4FY93|A0A2I4FY93_9ROSI (protein CHLOROPLAST IMPORT APPARATUS 2-like isoform X2 OS=Juglans regia OX=51240 GN=LOC109003090 PE=4 SV=1)

HSP 1 Score: 398.7 bits (1023), Expect = 1.6e-107
Identity = 272/423 (64.30%), Postives = 308/423 (72.81%), Query Frame = 0


Query: 3   SPCISGG-GRAYSFDLEIVKSPSSSWTRXXXXXXXXXXXXXXXXXXXXXLAISTRKSRTP 62
           S C+SGG GR Y+ DL+IVKS S+S     XXXXXXXXXXXXXXXXXX L I TRKSRTP
Sbjct: 2   SSCLSGGSGRTYALDLDIVKSLSTS----SXXXXXXXXXXXXXXXXXXPLTICTRKSRTP 61

Query: 63  RKRPNQTYNEATLLLSTAYPNVFSAKHLTNPRKFTKSHDSLFSDSAELLLPFRGIDSSEF 122
           RKRPNQTYNEA  LLSTAYPN+FSAK+LT PRKFTK HDS   DS ELLLPFR  DSS F
Sbjct: 62  RKRPNQTYNEAAALLSTAYPNIFSAKNLTKPRKFTKQHDSFLDDSPELLLPFRVTDSSAF 121

Query: 123 LIHQPL-EKPNSQIHSKLANLWENRPCSSPGEVDFQPDSMEM-----EDFDAESILDEEI 182
           L+HQP+ EKP+ QI SK+ N  + +PC SPGEVDF   S+E+     EDFDAESILDEEI
Sbjct: 122 LLHQPIQEKPSCQIQSKVTNFCD-KPCQSPGEVDFHASSLELCDGYEEDFDAESILDEEI 181

Query: 183 EEGIDSILGNLCVDNLETGDSVQD-SCANNHPWNCNCPWN----PIGLGGLNQKFESGHG 242
           EEGIDSI+GNL VD     D V D +  +++       W     P+GL G   KF+ G G
Sbjct: 182 EEGIDSIMGNLSVDT----DMVDDFNAGSSYGSGQKISWYGNSIPVGL-GFGGKFDLGFG 241

Query: 243 IERT----AIREVDNGNWWRFPTVDVVEISPKLNPKPPXXXXXXXXXXXXXXXXXTVIES 302
           +       A+R VD GNWW FP VDV +ISP+ +         XXXXXXXXXXXX+V+E 
Sbjct: 242 MRINGGVRALRHVDEGNWWGFPIVDVHQISPRFH---KASVSTXXXXXXXXXXXXSVVEL 301

Query: 303 KKAAMAPEKEKSEKPIPKGLVLKLNYEAVADAWSNRGSPFSDEIPASDTAGSDVNARLAQ 362
           K+  +  E   S KP   GL+LKLN+E V +AWSNRGSPFSDEI  SD  G DV+ARLAQ
Sbjct: 302 KEKELPKENSASPKP-NSGLLLKLNFEEVLNAWSNRGSPFSDEILGSDMPGDDVSARLAQ 361

Query: 363 IDLFSDGGGLLREASVLRYKEKKRTRLFSKKIRYQVRKVNADGRPRMKGRFVRRPNSSAS 410
           IDLF DGGG LREASVLRYKEK+RTRLFSKKIRYQVRKVNAD RPRMKGRFVRRPNSS +
Sbjct: 362 IDLFLDGGG-LREASVLRYKEKRRTRLFSKKIRYQVRKVNADQRPRMKGRFVRRPNSSTN 409

[Close]

BLAST of Carg23937 vs. TrEMBL
Match: tr|A0A2I4FY85|A0A2I4FY85_9ROSI (protein CHLOROPLAST IMPORT APPARATUS 2-like isoform X1 OS=Juglans regia OX=51240 GN=LOC109003090 PE=4 SV=1)

HSP 1 Score: 377.1 bits (967), Expect = 5.0e-101
Identity = 260/408 (63.73%), Postives = 295/408 (72.30%), Query Frame = 0


Query: 3   SPCISGG-GRAYSFDLEIVKSPSSSWTRXXXXXXXXXXXXXXXXXXXXXLAISTRKSRTP 62
           S C+SGG GR Y+ DL+IVKS S+S     XXXXXXXXXXXXXXXXXX L I TRKSRTP
Sbjct: 2   SSCLSGGSGRTYALDLDIVKSLSTS----SXXXXXXXXXXXXXXXXXXPLTICTRKSRTP 61

Query: 63  RKRPNQTYNEATLLLSTAYPNVFSAKHLTNPRKFTKSHDSLFSDSAELLLPFRGIDSSEF 122
           RKRPNQTYNEA  LLSTAYPN+FSAK+LT PRKFTK HDS   DS ELLLPFR  DSS F
Sbjct: 62  RKRPNQTYNEAAALLSTAYPNIFSAKNLTKPRKFTKQHDSFLDDSPELLLPFRVTDSSAF 121

Query: 123 LIHQPL-EKPNSQIHSKLANLWENRPCSSPGEVDFQPDSMEM-----EDFDAESILDEEI 182
           L+HQP+ EKP+ QI SK+ N  + +PC SPGEVDF   S+E+     EDFDAESILDEEI
Sbjct: 122 LLHQPIQEKPSCQIQSKVTNFCD-KPCQSPGEVDFHASSLELCDGYEEDFDAESILDEEI 181

Query: 183 EEGIDSILGNLCVDNLETGDSVQD-SCANNHPWNCNCPWN----PIGLGGLNQKFESGHG 242
           EEGIDSI+GNL VD     D V D +  +++       W     P+GL G   KF+ G G
Sbjct: 182 EEGIDSIMGNLSVDT----DMVDDFNAGSSYGSGQKISWYGNSIPVGL-GFGGKFDLGFG 241

Query: 243 IERT----AIREVDNGNWWRFPTVDVVEISPKLNPKPPXXXXXXXXXXXXXXXXXTVIES 302
           +       A+R VD GNWW FP VDV +ISP+ +         XXXXXXXXXXXX+V+E 
Sbjct: 242 MRINGGVRALRHVDEGNWWGFPIVDVHQISPRFH---KASVSTXXXXXXXXXXXXSVVEL 301

Query: 303 KKAAMAPEKEKSEKPIPKGLVLKLNYEAVADAWSNRGSPFSDEIPASDTAGSDVNARLAQ 362
           K+  +  E   S KP   GL+LKLN+E V +AWSNRGSPFSDEI  SD  G DV+ARLAQ
Sbjct: 302 KEKELPKENSASPKP-NSGLLLKLNFEEVLNAWSNRGSPFSDEILGSDMPGDDVSARLAQ 361

Query: 363 IDLFSDGGGLLREASVLRYKEKKRTRLFSKKIRYQVRKVNADGRPRMK 395
           IDLF DGGG LREASVLRYKEK+RTRLFSKKIRYQVRKVNAD RPRMK
Sbjct: 362 IDLFLDGGG-LREASVLRYKEKRRTRLFSKKIRYQVRKVNADQRPRMK 394

The following BLAST results are available for this feature:

BLAST of Carg23937 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022997021.1	1.2e-199	96.58	protein CHLOROPLAST IMPORT APPARATUS 2 [Cucurbita maxima]	[more]
XP_022929701.1	3.9e-198	96.58	protein CHLOROPLAST IMPORT APPARATUS 2-like [Cucurbita moschata]	[more]
XP_023546862.1	1.8e-195	94.67	protein CHLOROPLAST IMPORT APPARATUS 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_011648958.1	9.1e-163	78.24	PREDICTED: protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 [Cucumis sativus] >...	[more]
XP_008451201.1	6.5e-161	77.22	PREDICTED: protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 [Cucumis melo]	[more]

BLAST of Carg23937 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G25990.2	1.0e-59	42.37	CCT motif family protein	[more]
AT5G57180.2	6.7e-59	46.56	chloroplast import apparatus 2	[more]
AT1G07050.1	1.2e-18	52.08	CCT motif family protein	[more]
AT1G25440.1	8.3e-17	39.44	B-box type zinc finger protein with CCT domain	[more]
AT5G14370.1	8.3e-17	46.55	CCT motif family protein	[more]

BLAST of Carg23937 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LU68\|CIA2_ARATH	1.2e-57	46.56	Protein CHLOROPLAST IMPORT APPARATUS 2 OS=Arabidopsis thaliana OX=3702 GN=CIA2 P...	[more]
sp\|Q8RWD0\|COL16_ARATH	1.5e-15	39.44	Zinc finger protein CONSTANS-LIKE 16 OS=Arabidopsis thaliana OX=3702 GN=COL16 PE...	[more]
sp\|Q9C9A9\|COL7_ARATH	3.3e-15	47.06	Zinc finger protein CONSTANS-LIKE 7 OS=Arabidopsis thaliana OX=3702 GN=COL7 PE=2...	[more]
sp\|Q8LG76\|COL6_ARATH	2.2e-14	42.28	Zinc finger protein CONSTANS-LIKE 6 OS=Arabidopsis thaliana OX=3702 GN=COL6 PE=2...	[more]
sp\|Q9M9B3\|COL8_ARATH	7.2e-10	76.74	Zinc finger protein CONSTANS-LIKE 8 OS=Arabidopsis thaliana OX=3702 GN=COL8 PE=1...	[more]

BLAST of Carg23937 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LGV4\|A0A0A0LGV4_CUCSA	6.0e-163	78.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G061540 PE=4 SV=1	[more]
tr\|A0A1S3BQX8\|A0A1S3BQX8_CUCME	4.3e-161	77.22	protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC...	[more]
tr\|A0A1S3BQD2\|A0A1S3BQD2_CUCME	1.6e-155	77.41	protein CHLOROPLAST IMPORT APPARATUS 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC...	[more]
tr\|A0A2I4FY93\|A0A2I4FY93_9ROSI	1.6e-107	64.30	protein CHLOROPLAST IMPORT APPARATUS 2-like isoform X2 OS=Juglans regia OX=51240...	[more]
tr\|A0A2I4FY85\|A0A2I4FY85_9ROSI	5.0e-101	63.73	protein CHLOROPLAST IMPORT APPARATUS 2-like isoform X1 OS=Juglans regia OX=51240...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR010402	CCT_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23937-RA	Carg23937-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 358..400 e-value: 2.5E-18 score: 65.7
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 358..400 score: 15.636
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 389..409
None	No IPR available	PANTHER	PTHR31874	FAMILY NOT NAMED	coord: 1..408
None	No IPR available	PANTHER	PTHR31874:SF10	PROTEIN CHLOROPLAST IMPORT APPARATUS 2	coord: 1..408

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23937	Cla022781	Watermelon (97103) v1	carwmB0616
Carg23937	Csa2G061540	Cucumber (Chinese Long) v2	carcuB0643
Carg23937	MELO3C003975	Melon (DHL92) v3.5.1	carmeB0619
Carg23937	ClCG11G011760	Watermelon (Charleston Gray)	carwcgB0601
Carg23937	CSPI02G06410	Wild cucumber (PI 183967)	carcpiB0650
Carg23937	Cucsa.089010	Cucumber (Gy14) v1	carcgyB0692
Carg23937	CmaCh12G009120	Cucurbita maxima (Rimu)	carcmaB0870
Carg23937	CmoCh12G009170	Cucurbita moschata (Rifu)	carcmoB0847
Carg23937	CmoCh05G007510	Cucurbita moschata (Rifu)	carcmoB0849
Carg23937	Lsi11G007920	Bottle gourd (USVL1VR-Ls)	carlsiB563
Carg23937	Cp4.1LG07g07580	Cucurbita pepo (Zucchini)	carcpeB0880
Carg23937	Cp4.1LG11g06160	Cucurbita pepo (Zucchini)	carcpeB0879
Carg23937	CsGy2G006550	Cucumber (Gy14) v2	carcgybB0616
Carg23937	MELO3C003975.2	Melon (DHL92) v3.6.1	carmedB0626
Carg23937	CsaV3_2G008720	Cucumber (Chinese Long) v3	carcucB0651
Carg23937	Cla97C11G217740	Watermelon (97103) v2	carwmbB0644
Carg23937	Bhi06G001077	Wax gourd	carwgoB0735

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg23937	Carg24194	Silver-seed gourd	carcarB547

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23937	Cucurbita maxima (Rimu)	carcmaB0872