Carg23920 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23920
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	villin-4-like
Location	Cucurbita_argyrosperma_scaffold_173 : 146866 .. 149235 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGGAAACTCGTTCCAAAGAAAACTTACAATAGTCAAAAGCGGAGGCACTCCTGCTCTAGATGTAAGGCTTCTTCATATAGTTTCAATTCTTAACCCCCACCCACAAACACAGTCCATTGATTTTCTTAATCTGCATTATGTTCCTTTTATTTCTTCACATTATCATCAGCCACCCTCTTCTTCTCTTCACATTCTTTTCCTAGTTTCCTGGTCTTTATTGATGCCCCCATTAATAAGTGACTTCACTATTACTCAGAAACCAAAGCGAAGAACACCGGTATCATATGGTGGGAGGTCTGCAGTCCCAGACAAATCACAACGCTCTAGGAGCATGTCTTTTAGTCCTGAAAGGGTCCGTGTAAGGGGGAGGTCTCCTGCTTTCAATGCATTGGCTGCTACTTTTGAGAACCCCAATACAAGGAACCTTTCTACTCCACCCCCAGTTAGAAAGATCTACCCGAAATCAGTGAGCCCAGATTCAGCAAAATTAGCTGCCGCAAAATCTACCATAGCAGCTCTTGGTGCTAGCTTTGAACAGCCACCACCTGCTCGAGAAGCTATTATACCACATTCAATAAAAGGTAGCCTTCAATTTATAAATTCATGGCAGCTATTTCATGGCTTCGTACCTGACATAATTACCTTGTATTGGGTGAACTGACTCCTCCAGAGCCTCCCAAACCTAAGCCGGAGACTAATAATAATGGTGAGGTTAATGATAAGGAGAAGCAAAACTCAAAGACGGTCGGAATTGAAACTCTCACCATACAGGAAGATGTGAAAGAAGGTGAGGCTGAAGATGATGAAGGCCTCGCAATATATCCATATGACCGTCTAAAAACTACATCTACCGACCCCATTTCAGACATTGATGTGACAAGACGAGAGGTAATATTAAAAAAGTAATGCTTCAACTTGAGTTTATAGATTCTTAATATGATATTTTCTAAGATGCTTAAATTTGCAACTCTGCAGACTTACCTCTCATCAGAAGAGTTCAGGGCAAAGTTTAGAATGACCAAGGATGCATTTTATAAGTTGCCAAAATGGAAACAGAATAAGCATAAAATGGCCCTTCAACTATTCTAATTCCTGTATGGTTTCCTCTGATCATTTCACTCAGTTTCCTGCAGTTCTATGTTACCAGTGGAAGAGGCTTGGTTTTCAAATCTATTTGTTGTTAGATGTAAGGAGCCTTCTGAACTGGCTGGACTCAACTGGTAAGGAGTGGAAGGGCCAGCTTCAGTGCATTTGTAGCTGCTTCTGTTGCCCAGAGACTTGTGTTCATGATTGATGGACAAATTCAAGTTCTGGTTTTTGCTTGCGTCCTTGCAAACATCTTTACCTTATTTATTTCTTTACTAAGCATTTGGTATTCATTTTAATGTTAAACCTATGTTGTGAGCTTGCAATTTTCCCCCCCTTTTTGAGCATATGTTTAGTTTTCAGTTTTATTTTTTCATTCAATTTTTTTCAGGAGAGAAGTTAGGTGGTCTGCAATTTAGTTTTCCTTTTATTTGCATTTCCCGAGGAAGAACAACCGTGTGTACAGCAGAGTGTAATACTTCAGATGACAATAAACTTATAAAAAGTGTGATTTTCATTATATCTTTCCCTCTAAGTTTTCCTGCGCTCGCTCTTTCGATTTTGACATTTCTGTTCGGGATGTTTGATATTCCAAGGTTGTCATCTTTCAACCACTGTTGAAAAGAACGAGTTATCACACAGATCTAAAGTGCGTGAATAGAGTGTCACGTACCTTCAGACATTGTGAAGCATTCAAGCTTGTGACCTGTAGGTGCCATTTTGAGCAAGGATTGAATCTACAACAAAGCTTTCTTAATTTTATTGCTCAAACAACAATATAACCTAATTTTACTCCAGAGATAAGACGATGTATTTTCTTAAAATGGTAATAAATTCATATTCACTCATATGAAGAACACGTAATTCCAACTTAAAAGCAGATTCAGATTTGTAACTACCCCCCAATTCATTCAGTTTCCCCAAGCCAATTCAAGATTTAAAACCAGACCTTCAATGAAATTCTAAACTAAAAAACATAGAACATTCCACTAGGCGCCATGGAAATTAAACTTATCTGAAGGCGCAGCCGTAGGGAAGACGTTGCTCCTGCATCGAATTCAAGAAATCGTTCGAACCTCCTTGGATTGTGAAGTTAAATTCGAGCAAAATGATGATCTTGAGCCTACGGAATAAAGGAAGAATTAAGGTCAGAAGAAATCTCCGGAATGAATTTGAATTACCGGTGGCGTGAGATCAAATTAAGCAGCTAAATCGTTGTTGATCAAAGATGAGATCTGGAAGGAGTTTGAATTGAAGACAAATTCCTCGCGTTTTCTTT

mRNA sequence

ATGCATGGAAACTCGTTCCAAAGAAAACTTACAATAGTCAAAAGCGGAGGCACTCCTGCTCTAGATAAACCAAAGCGAAGAACACCGGTATCATATGGTGGGAGGTCTGCAGTCCCAGACAAATCACAACGCTCTAGGAGCATGTCTTTTAGTCCTGAAAGGGTCCGTGTAAGGGGGAGGTCTCCTGCTTTCAATGCATTGGCTGCTACTTTTGAGAACCCCAATACAAGGAACCTTTCTACTCCACCCCCAGTTAGAAAGATCTACCCGAAATCAGTGAGCCCAGATTCAGCAAAATTAGCTGCCGCAAAATCTACCATAGCAGCTCTTGGTGCTAGCTTTGAACAGCCACCACCTGCTCGAGAAGCTATTATACCACATTCAATAAAAGAGCCTCCCAAACCTAAGCCGGAGACTAATAATAATGGTGAGGTTAATGATAAGGAGAAGCAAAACTCAAAGACGGTCGGAATTGAAACTCTCACCATACAGGAAGATGTGAAAGAAGGTGAGGCTGAAGATGATGAAGGCCTCGCAATATATCCATATGACCGTCTAAAAACTACATCTACCGACCCCATTTCAGACATTGATGTGACAAGACGAGAGACTTACCTCTCATCAGAAGAGTTCAGGGCAAAGTTTAGAATGACCAAGGATGCATTTTATAAGTTGCCAAAATGGAAACAGAATAAGCATAAAATGGCCCTTCAACTATTCTAATTCCTGTATGGTTTCCTCTGATCATTTCACTCAGTTTCCTGCAGTTCTATGTTACCAGTGGAAGAGGCTTGGTTTTCAAATCTATTTGTTGTTAGATGTAAGGAGCCTTCTGAACTGGCTGGACTCAACTGGTAAGGAGTGGAAGGGCCAGCTTCAGTGCATTTGTAGCTGCTTCTGTTGCCCAGAGACTTGTGTTCATGATTGATGGACAAATTCAAGTTCTGGTTTTTGCTTGCGTCCTTGCAAACATCTTTACCTTATTTATTTCTTTACTAAGCATTTGGTATTCATTTTAATGTTAAACCTATGTTGTGAGCTTGCAATTTTCCCCCCCTTTTTGAGCATATGTTTAGTTTTCAGTTTTATTTTTTCATTCAATTTTTTTCAGGAGAGAAGTTAGGTGGTCTGCAATTTAGTTTTCCTTTTATTTGCATTTCCCGAGGAAGAACAACCGTGTGTACAGCAGAGTGTAATACTTCAGATGACAATAAACTTATAAAAAGTGTGATTTTCATTATATCTTTCCCTCTAAGTTTTCCTGCGCTCGCTCTTTCGATTTTGACATTTCTGTTCGGGATGTTTGATATTCCAAGGTTGTCATCTTTCAACCACTGTTGAAAAGAACGAGTTATCACACAGATCTAAAGTGCGTGAATAGAGTGTCACGTACCTTCAGACATTGTGAAGCATTCAAGCTTGTGACCTGTAGGTGCCATTTTGAGCAAGGATTGAATCTACAACAAAGCTTTCTTAATTTTATTGCTCAAACAACAATATAACCTAATTTTACTCCAGAGATAAGACGATGTATTTTCTTAAAATGGTAATAAATTCATATTCACTCATATGAAGAACACGTAATTCCAACTTAAAAGCAGATTCAGATTTGTAACTACCCCCCAATTCATTCAGTTTCCCCAAGCCAATTCAAGATTTAAAACCAGACCTTCAATGAAATTCTAAACTAAAAAACATAGAACATTCCACTAGGCGCCATGGAAATTAAACTTATCTGAAGGCGCAGCCGTAGGGAAGACGTTGCTCCTGCATCGAATTCAAGAAATCGTTCGAACCTCCTTGGATTGTGAAGTTAAATTCGAGCAAAATGATGATCTTGAGCCTACGGAATAAAGGAAGAATTAAGGTCAGAAGAAATCTCCGGAATGAATTTGAATTACCGGTGGCGTGAGATCAAATTAAGCAGCTAAATCGTTGTTGATCAAAGATGAGATCTGGAAGGAGTTTGAATTGAAGACAAATTCCTCGCGTTTTCTTT

Coding sequence (CDS)

ATGCATGGAAACTCGTTCCAAAGAAAACTTACAATAGTCAAAAGCGGAGGCACTCCTGCTCTAGATAAACCAAAGCGAAGAACACCGGTATCATATGGTGGGAGGTCTGCAGTCCCAGACAAATCACAACGCTCTAGGAGCATGTCTTTTAGTCCTGAAAGGGTCCGTGTAAGGGGGAGGTCTCCTGCTTTCAATGCATTGGCTGCTACTTTTGAGAACCCCAATACAAGGAACCTTTCTACTCCACCCCCAGTTAGAAAGATCTACCCGAAATCAGTGAGCCCAGATTCAGCAAAATTAGCTGCCGCAAAATCTACCATAGCAGCTCTTGGTGCTAGCTTTGAACAGCCACCACCTGCTCGAGAAGCTATTATACCACATTCAATAAAAGAGCCTCCCAAACCTAAGCCGGAGACTAATAATAATGGTGAGGTTAATGATAAGGAGAAGCAAAACTCAAAGACGGTCGGAATTGAAACTCTCACCATACAGGAAGATGTGAAAGAAGGTGAGGCTGAAGATGATGAAGGCCTCGCAATATATCCATATGACCGTCTAAAAACTACATCTACCGACCCCATTTCAGACATTGATGTGACAAGACGAGAGACTTACCTCTCATCAGAAGAGTTCAGGGCAAAGTTTAGAATGACCAAGGATGCATTTTATAAGTTGCCAAAATGGAAACAGAATAAGCATAAAATGGCCCTTCAACTATTCTAA

Protein sequence

MHGNSFQRKLTIVKSGGTPALDKPKRRTPVSYGGRSAVPDKSQRSRSMSFSPERVRVRGRSPAFNALAATFENPNTRNLSTPPPVRKIYPKSVSPDSAKLAAAKSTIAALGASFEQPPPAREAIIPHSIKEPPKPKPETNNNGEVNDKEKQNSKTVGIETLTIQEDVKEGEAEDDEGLAIYPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKFRMTKDAFYKLPKWKQNKHKMALQLF

Homology

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BLAST of Carg23920 vs. NCBI nr
Match: XP_022929555.1 (villin-4-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 449.5 bits (1155), Expect = 7.1e-123
Identity = 239/240 (99.58%), Postives = 239/240 (99.58%), Query Frame = 0


Query: 1   MHGNSFQRKLTIVKSGGTPALDKPKRRTPVSYGGRSAVPDKSQRSRSMSFSPERVRVRGR 60
           MHGNSFQRKLTIVKSGGTPALDKPKRRTPVSYGGRSAVPDKSQRSRSMSFSPERVRVRGR
Sbjct: 725 MHGNSFQRKLTIVKSGGTPALDKPKRRTPVSYGGRSAVPDKSQRSRSMSFSPERVRVRGR 784

Query: 61  SPAFNALAATFENPNTRNLSTPPPVRKIYPKSVSPDSAKLAAAKSTIAALGASFEQPPPA 120
           SPAFNALAATFENPNTRNLSTPPPVRKIYPKSVSPDSAKLAAAKSTIAALGASFEQPPPA
Sbjct: 785 SPAFNALAATFENPNTRNLSTPPPVRKIYPKSVSPDSAKLAAAKSTIAALGASFEQPPPA 844

Query: 121 REAIIPHSIKEPPKXXXXXNNNGEVNDKEKQNSKTVGIETLTIQEDVKEGEAEDDEGLAI 180
           REAIIPHSIKEPPKXXXXXNNNGEVNDKEKQNSKTVGIETLTIQEDVKEGEAEDDEGLAI
Sbjct: 845 REAIIPHSIKEPPKXXXXXNNNGEVNDKEKQNSKTVGIETLTIQEDVKEGEAEDDEGLAI 904

Query: 181 YPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKFRMTKDAFYKLPKWKQNKHKMALQLF 240
           YPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKF MTKDAFYKLPKWKQNKHKMALQLF
Sbjct: 905 YPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKFGMTKDAFYKLPKWKQNKHKMALQLF 964

[Close]

BLAST of Carg23920 vs. NCBI nr
Match: XP_022929553.1 (villin-4-like isoform X1 [Cucurbita moschata] >XP_022929554.1 villin-4-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 449.5 bits (1155), Expect = 7.1e-123
Identity = 239/240 (99.58%), Postives = 239/240 (99.58%), Query Frame = 0


Query: 1   MHGNSFQRKLTIVKSGGTPALDKPKRRTPVSYGGRSAVPDKSQRSRSMSFSPERVRVRGR 60
           MHGNSFQRKLTIVKSGGTPALDKPKRRTPVSYGGRSAVPDKSQRSRSMSFSPERVRVRGR
Sbjct: 726 MHGNSFQRKLTIVKSGGTPALDKPKRRTPVSYGGRSAVPDKSQRSRSMSFSPERVRVRGR 785

Query: 61  SPAFNALAATFENPNTRNLSTPPPVRKIYPKSVSPDSAKLAAAKSTIAALGASFEQPPPA 120
           SPAFNALAATFENPNTRNLSTPPPVRKIYPKSVSPDSAKLAAAKSTIAALGASFEQPPPA
Sbjct: 786 SPAFNALAATFENPNTRNLSTPPPVRKIYPKSVSPDSAKLAAAKSTIAALGASFEQPPPA 845

Query: 121 REAIIPHSIKEPPKXXXXXNNNGEVNDKEKQNSKTVGIETLTIQEDVKEGEAEDDEGLAI 180
           REAIIPHSIKEPPKXXXXXNNNGEVNDKEKQNSKTVGIETLTIQEDVKEGEAEDDEGLAI
Sbjct: 846 REAIIPHSIKEPPKXXXXXNNNGEVNDKEKQNSKTVGIETLTIQEDVKEGEAEDDEGLAI 905

Query: 181 YPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKFRMTKDAFYKLPKWKQNKHKMALQLF 240
           YPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKF MTKDAFYKLPKWKQNKHKMALQLF
Sbjct: 906 YPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKFGMTKDAFYKLPKWKQNKHKMALQLF 965

[Close]

BLAST of Carg23920 vs. NCBI nr
Match: XP_023521364.1 (villin-4-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023545664.1 villin-4-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 447.2 bits (1149), Expect = 3.5e-122
Identity = 238/240 (99.17%), Postives = 238/240 (99.17%), Query Frame = 0


Query: 1   MHGNSFQRKLTIVKSGGTPALDKPKRRTPVSYGGRSAVPDKSQRSRSMSFSPERVRVRGR 60
           MHGNSFQRKLTIVKSGGTPA DKPKRRTPVSYGGRSAVPDKSQRSRSMSFSPERVRVRGR
Sbjct: 725 MHGNSFQRKLTIVKSGGTPARDKPKRRTPVSYGGRSAVPDKSQRSRSMSFSPERVRVRGR 784

Query: 61  SPAFNALAATFENPNTRNLSTPPPVRKIYPKSVSPDSAKLAAAKSTIAALGASFEQPPPA 120
           SPAFNALAATFENPNTRNLSTPPPVRKIYPKSVSPDSAKLAAAKSTIAALGASFEQPPPA
Sbjct: 785 SPAFNALAATFENPNTRNLSTPPPVRKIYPKSVSPDSAKLAAAKSTIAALGASFEQPPPA 844

Query: 121 REAIIPHSIKEPPKXXXXXNNNGEVNDKEKQNSKTVGIETLTIQEDVKEGEAEDDEGLAI 180
           REAIIPHSIKEPPKXXXXXNNNGEVNDKEKQNSKTVGIETLTIQEDVKEGEAEDDEGLAI
Sbjct: 845 REAIIPHSIKEPPKXXXXXNNNGEVNDKEKQNSKTVGIETLTIQEDVKEGEAEDDEGLAI 904

Query: 181 YPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKFRMTKDAFYKLPKWKQNKHKMALQLF 240
           YPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKF MTKDAFYKLPKWKQNKHKMALQLF
Sbjct: 905 YPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKFGMTKDAFYKLPKWKQNKHKMALQLF 964

[Close]

BLAST of Carg23920 vs. NCBI nr
Match: XP_023521363.1 (villin-4-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545663.1 villin-4-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 447.2 bits (1149), Expect = 3.5e-122
Identity = 238/240 (99.17%), Postives = 238/240 (99.17%), Query Frame = 0


Query: 1   MHGNSFQRKLTIVKSGGTPALDKPKRRTPVSYGGRSAVPDKSQRSRSMSFSPERVRVRGR 60
           MHGNSFQRKLTIVKSGGTPA DKPKRRTPVSYGGRSAVPDKSQRSRSMSFSPERVRVRGR
Sbjct: 726 MHGNSFQRKLTIVKSGGTPARDKPKRRTPVSYGGRSAVPDKSQRSRSMSFSPERVRVRGR 785

Query: 61  SPAFNALAATFENPNTRNLSTPPPVRKIYPKSVSPDSAKLAAAKSTIAALGASFEQPPPA 120
           SPAFNALAATFENPNTRNLSTPPPVRKIYPKSVSPDSAKLAAAKSTIAALGASFEQPPPA
Sbjct: 786 SPAFNALAATFENPNTRNLSTPPPVRKIYPKSVSPDSAKLAAAKSTIAALGASFEQPPPA 845

Query: 121 REAIIPHSIKEPPKXXXXXNNNGEVNDKEKQNSKTVGIETLTIQEDVKEGEAEDDEGLAI 180
           REAIIPHSIKEPPKXXXXXNNNGEVNDKEKQNSKTVGIETLTIQEDVKEGEAEDDEGLAI
Sbjct: 846 REAIIPHSIKEPPKXXXXXNNNGEVNDKEKQNSKTVGIETLTIQEDVKEGEAEDDEGLAI 905

Query: 181 YPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKFRMTKDAFYKLPKWKQNKHKMALQLF 240
           YPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKF MTKDAFYKLPKWKQNKHKMALQLF
Sbjct: 906 YPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKFGMTKDAFYKLPKWKQNKHKMALQLF 965

[Close]

BLAST of Carg23920 vs. NCBI nr
Match: XP_022997656.1 (villin-4-like isoform X1 [Cucurbita maxima] >XP_022997657.1 villin-4-like isoform X1 [Cucurbita maxima] >XP_022997658.1 villin-4-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 445.7 bits (1145), Expect = 1.0e-121
Identity = 232/240 (96.67%), Postives = 233/240 (97.08%), Query Frame = 0


Query: 1   MHGNSFQRKLTIVKSGGTPALDKPKRRTPVSYGGRSAVPDKSQRSRSMSFSPERVRVRGR 60
           MHGNSFQRKLTIVKSGGTPA DKPKRRTPVSYGGRSAVPDKSQRSRSMSFSPERVRVRGR
Sbjct: 726 MHGNSFQRKLTIVKSGGTPAQDKPKRRTPVSYGGRSAVPDKSQRSRSMSFSPERVRVRGR 785

Query: 61  SPAFNALAATFENPNTRNLSTPPPVRKIYPKSVSPDSAKLAAAKSTIAALGASFEQPPPA 120
           SPAFNALAATFENPNTRNLSTPPPVRKIYPKSVSPDSAKLAAAKSTIAALGASFEQPPPA
Sbjct: 786 SPAFNALAATFENPNTRNLSTPPPVRKIYPKSVSPDSAKLAAAKSTIAALGASFEQPPPA 845

Query: 121 REAIIPHSIKEPPKXXXXXNNNGEVNDKEKQNSKTVGIETLTIQEDVKEGEAEDDEGLAI 180
           REAIIPHSIKEPPK     NNNGEVNDKEKQNSKTVGIETLTIQEDVKEGEAEDDEGLAI
Sbjct: 846 REAIIPHSIKEPPKPKLETNNNGEVNDKEKQNSKTVGIETLTIQEDVKEGEAEDDEGLAI 905

Query: 181 YPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKFRMTKDAFYKLPKWKQNKHKMALQLF 240
           YPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKF MTK+AFYKLPKWKQNKHKMALQLF
Sbjct: 906 YPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKFGMTKEAFYKLPKWKQNKHKMALQLF 965

[Close]

BLAST of Carg23920 vs. TAIR10
Match: AT4G30160.2 (villin 4)

HSP 1 Score: 280.0 bits (715), Expect = 1.3e-75
Identity = 169/251 (67.33%), Postives = 190/251 (75.70%), Query Frame = 0


Query: 1   MHGNSFQRKLTIVKSGGTPALDKPKRRTPVSYGGRSAVPDKS-QRSRSMSFSPERVRVRG 60
           MHGNSFQRKL IVK+GGTP  DKPKRRTP SYGGR++VPDKS QRSRSMSFSP+RVRVRG
Sbjct: 735 MHGNSFQRKLKIVKNGGTPVADKPKRRTPASYGGRASVPDKSQQRSRSMSFSPDRVRVRG 794

Query: 61  RSPAFNALAATFENPNTRNLSTPPP-VRKIYPKSVSPDSAKLAAA--KSTIAALGASFEQ 120
           RSPAFNALAATFE+ N RNLSTPPP VRK+YP+SV+PDS+K A A   S IA+  A FE+
Sbjct: 795 RSPAFNALAATFESQNARNLSTPPPVVRKLYPRSVTPDSSKFAPAPKSSAIASRSALFEK 854

Query: 121 PPPAREAIIPHSIK-------EPPKXXXXXNNNGEVNDKEKQNSKTVGIETLTIQEDVKE 180
            PP +E  IP  +K           XXXXX               +  IE+LTIQED KE
Sbjct: 855 IPP-QEPSIPKPVKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSRIESLTIQEDAKE 914

Query: 181 GEAEDDEGLAIYPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKFRMTKDAFYKLPKWK 240
           G  ED+E L  +PYDRLKTTSTDP+SDIDVTRRE YLSSEEF+ KF MTK+AFYKLPKWK
Sbjct: 915 G-VEDEEDLPAHPYDRLKTTSTDPVSDIDVTRREAYLSSEEFKEKFGMTKEAFYKLPKWK 974

[Close]

BLAST of Carg23920 vs. TAIR10
Match: AT5G57320.1 (villin, putative)

HSP 1 Score: 151.8 bits (382), Expect = 5.5e-37
Identity = 110/246 (44.72%), Postives = 132/246 (53.66%), Query Frame = 0


Query: 1   MHGNSFQRKLTIVKSGGTPALDKPKRRTPVSYGGRSAVPDK-SQRSRSMSFSPERVRVRG 60
           MHG+SFQRKL I+ + G P LDKPKRR P +Y  RS VPDK                   
Sbjct: 727 MHGDSFQRKLAILTNKGKPLLDKPKRRVP-AYSSRSTVPDKXXXXXXXXXXXXXXXXXXX 786

Query: 61  RSPAFNALAATFENPNTRNLSTPPP-----VRKIYPKSVSPDSAKLAAAKSTIAALGASF 120
                 ALAA FE  N RN STPPP     VRK+YPKS +PD +K+ A KS IAA  A F
Sbjct: 787 XXXXXXALAANFEKLNIRNQSTPPPMVSPMVRKLYPKSHAPDLSKI-APKSAIAARTALF 846

Query: 121 EQPPPAREAIIPHSIKEPPKXXXXXNNNGEVNDKEKQNSKTVGIETLTIQEDVKEGEAED 180
           E+P P  +            XXXXX                                 E+
Sbjct: 847 EKPTPTSQ--------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEE 906

Query: 181 DEGLAIYPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKFRMTKDAFYKLPKWKQNKHK 240
           +  L  +PY+RLKT S DP+SD+D+TRRE YL+S EF+ KF MTK+ FYKLPKWKQNK K
Sbjct: 907 ESSLPTFPYERLKTDSEDPVSDVDLTRREAYLTSVEFKEKFEMTKNEFYKLPKWKQNKLK 962

[Close]

BLAST of Carg23920 vs. TAIR10
Match: AT2G29890.3 (villin-like 1)

HSP 1 Score: 65.1 bits (157), Expect = 6.8e-11
Identity = 69/246 (28.05%), Postives = 100/246 (40.65%), Query Frame = 0


Query: 1   MHGNSFQRKLTIVKSGGTPALDKPKRRTPVSYGGRSAVPDKSQRSRSMS----FSPERVR 60
           MHGNSF+RKL  +K          K  T  S G +     K   SR +            
Sbjct: 724 MHGNSFERKLASLKG--------KKTSTKRSSGSQYRSQSKDNASRDLQSXXXXXXXXXX 783

Query: 61  VRGRSPAFNALAATFENPNTRNLSTPPPVRKIYPKS--VSPDSAKLAAAKSTIAALGASF 120
                                  ++ P V+K++ +S  V P+  K++        LG   
Sbjct: 784 XXXXXXXXXXXXXXXXXXXXXXXNSTPVVKKLFSESLLVDPNDGKVSYVNLFTERLG--- 843

Query: 121 EQPPPAREAIIPHSIKEPPKXXXXXNNNGEVNDKEKQNSKTVGIETLTIQEDVKEGEAED 180
                     + H  ++          +   +D  KQ  + VGI +          +   
Sbjct: 844 ---------YMTHKYQK----RVARQESSSKSDISKQKPR-VGINS----------DLSS 903

Query: 181 DEGLAIYPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKFRMTKDAFYKLPKWKQNKHK 240
            E LA Y Y++L+  S  P++DID TRRE YL+ +EF  +F M K  FY LPKWKQNK K
Sbjct: 904 LESLA-YSYEQLRVDSQKPVTDIDATRREAYLTEKEFEERFGMAKSEFYALPKWKQNKLK 933

[Close]

BLAST of Carg23920 vs. TAIR10
Match: AT2G41740.1 (villin 2)

HSP 1 Score: 61.6 bits (148), Expect = 7.5e-10
Identity = 30/73 (41.10%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 168 KEGEAEDDEGLAIYPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKFRMTKDAFYKLPK 227
           ++G++E     A + Y++L+  S +P++ ID  RRE YLS EEF++ F + K+AF  LP+
Sbjct: 904 EQGDSEIQPSGATFTYEQLRAKSENPVTGIDFKRREAYLSEEEFQSVFGIEKEAFNNLPR 963

Query: 228 WKQNKHKMALQLF 241
           WKQ+  K    LF
Sbjct: 964 WKQDLLKKKFDLF 976

[Close]

BLAST of Carg23920 vs. TAIR10
Match: AT3G57410.1 (villin 3)

HSP 1 Score: 60.1 bits (144), Expect = 2.2e-09
Identity = 29/60 (48.33%), Postives = 38/60 (63.33%), Query Frame = 0


Query: 181 YPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKFRMTKDAFYKLPKWKQNKHKMALQLF 240
           + Y+RL+  S  P++ ID  RRE YLS  EF+  F M K++FYKLP WKQ+  K    LF
Sbjct: 906 FTYERLQAKSEKPVTGIDFKRREAYLSEVEFKTVFGMEKESFYKLPGWKQDLLKKKFNLF 965

[Close]

BLAST of Carg23920 vs. Swiss-Prot
Match: sp|O65570|VILI4_ARATH (Villin-4 OS=Arabidopsis thaliana OX=3702 GN=VLN4 PE=1 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 2.4e-74
Identity = 169/251 (67.33%), Postives = 190/251 (75.70%), Query Frame = 0


Query: 1   MHGNSFQRKLTIVKSGGTPALDKPKRRTPVSYGGRSAVPDKS-QRSRSMSFSPERVRVRG 60
           MHGNSFQRKL IVK+GGTP  DKPKRRTP SYGGR++VPDKS QRSRSMSFSP+RVRVRG
Sbjct: 726 MHGNSFQRKLKIVKNGGTPVADKPKRRTPASYGGRASVPDKSQQRSRSMSFSPDRVRVRG 785

Query: 61  RSPAFNALAATFENPNTRNLSTPPP-VRKIYPKSVSPDSAKLAAA--KSTIAALGASFEQ 120
           RSPAFNALAATFE+ N RNLSTPPP VRK+YP+SV+PDS+K A A   S IA+  A FE+
Sbjct: 786 RSPAFNALAATFESQNARNLSTPPPVVRKLYPRSVTPDSSKFAPAPKSSAIASRSALFEK 845

Query: 121 PPPAREAIIPHSIK-------EPPKXXXXXNNNGEVNDKEKQNSKTVGIETLTIQEDVKE 180
            PP +E  IP  +K           XXXXX               +  IE+LTIQED KE
Sbjct: 846 IPP-QEPSIPKPVKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSRIESLTIQEDAKE 905

Query: 181 GEAEDDEGLAIYPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKFRMTKDAFYKLPKWK 240
           G  ED+E L  +PYDRLKTTSTDP+SDIDVTRRE YLSSEEF+ KF MTK+AFYKLPKWK
Sbjct: 906 G-VEDEEDLPAHPYDRLKTTSTDPVSDIDVTRREAYLSSEEFKEKFGMTKEAFYKLPKWK 965

[Close]

BLAST of Carg23920 vs. Swiss-Prot
Match: sp|Q0J716|VLN5_ORYSJ (Villin-5 OS=Oryza sativa subsp. japonica OX=39947 GN=VLN5 PE=3 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 2.1e-73
Identity = 155/241 (64.32%), Postives = 184/241 (76.35%), Query Frame = 0


Query: 1   MHGNSFQRKLTIVKSGGTPALDKPKRRTPVSYGGRSAVPDKSQRSRSMSFSPERVRVRGR 60
           MHGNS+QRKL+IVK GG+PALDKPKRRTP +Y GRS V DKSQRSRSMSFSPERVRVRGR
Sbjct: 728 MHGNSYQRKLSIVKGGGSPALDKPKRRTP-TYSGRSTVQDKSQRSRSMSFSPERVRVRGR 787

Query: 61  SPAFNALAATFENPNTRNLSTPPP-VRKIYPKSVSPDSAKLAAAKSTIAALGASFEQPPP 120
           SPAF ALAA FE+ N+RNLSTPPP V+K+YPKS +PDS+   +  S  A+L  SF++P  
Sbjct: 788 SPAFTALAANFESANSRNLSTPPPVVKKLYPKSATPDSSSAPSKSSATASLTGSFDRPKS 847

Query: 121 AREAIIPHSIKEPPKXXXXXNNNGEVNDKEKQNSKTVGIETLTIQEDVKEGEAEDDEGLA 180
            ++     S  E PK         E + KE  N+ T  +E+LTI EDVKE E EDDEGL 
Sbjct: 848 VKDG----SELEKPKQ--------EEDAKEGINTMTSRVESLTINEDVKENEPEDDEGLP 907

Query: 181 IYPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKFRMTKDAFYKLPKWKQNKHKMALQL 240
           +YPYDRL TT+ DP+++IDVTRRETYLSS EF+ KF MTK+AF KLPKWKQN+ K+ALQL
Sbjct: 908 VYPYDRLITTAADPVTEIDVTRRETYLSSAEFKDKFGMTKEAFSKLPKWKQNRMKIALQL 955

[Close]

BLAST of Carg23920 vs. Swiss-Prot
Match: sp|Q67U26|VLN3_ORYSJ (Villin-3 OS=Oryza sativa subsp. japonica OX=39947 GN=VLN3 PE=2 SV=2)

HSP 1 Score: 263.5 bits (672), Expect = 2.4e-69
Identity = 151/247 (61.13%), Postives = 182/247 (73.68%), Query Frame = 0


Query: 1   MHGNSFQRKLTIVKSGGTPALDKPKRR--TPVSYGGRSAVPDKSQRSRSMSFSPERVRVR 60
           MHGNSF+R+L+IVK G  P LDKPKRR  T  S+ GRS+VP+KSQRSRSMSFSP+RVRVR
Sbjct: 727 MHGNSFERRLSIVKDGVKPKLDKPKRRPTTSSSHTGRSSVPEKSQRSRSMSFSPDRVRVR 786

Query: 61  GRSPAFNALAATFENPNTRNLSTPPP-VRKIYPKSVSPDSAKLAAAKSTIAALGASFEQP 120
           GRSPAFNALAA FENPN RNLSTPPP +RK  PKS S D  K     ++IAA+ ASFE+P
Sbjct: 787 GRSPAFNALAANFENPNARNLSTPPPAIRKPSPKSPSSDPTKPPQRAASIAAISASFERP 846

Query: 121 PPAREAIIPHSIKEPP----KXXXXXNNNGEVNDKEKQNSKTVGIETLTIQEDVKEGEAE 180
            P    +IP SIK  P              E N K+   SK     T TIQED+KEG+ E
Sbjct: 847 RP---TLIPKSIKASPDVNKPQVEASKPKPEANGKDSTPSKDSPTVTPTIQEDLKEGQPE 906

Query: 181 DDEGLAIYPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKFRMTKDAFYKLPKWKQNKH 240
           ++EGL +YPY+RL+T+S +P++DIDVT+RETYLS+ EFR +F MTK+AF KLPKWKQN+ 
Sbjct: 907 NEEGLPVYPYERLRTSSINPVTDIDVTKRETYLSAAEFRERFGMTKEAFAKLPKWKQNRL 966

[Close]

BLAST of Carg23920 vs. Swiss-Prot
Match: sp|Q0JAD9|VLN4_ORYSJ (Villin-4 OS=Oryza sativa subsp. japonica OX=39947 GN=VLN4 PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.1e-54
Identity = 130/242 (53.72%), Postives = 161/242 (66.53%), Query Frame = 0


Query: 1   MHGNSFQRKLTIVKSGGTPALDKPKRRTPVSYGGRSAVPDKS-QRSRSMSFSPERVRVRG 60
           MHG+S+QRKL IVK G TP+LDKPKRRTP ++ GR+A  DKS QR+RSMS SPER R+RG
Sbjct: 728 MHGSSYQRKLAIVKGGATPSLDKPKRRTP-AFSGRNAGQDKSQQRTRSMSHSPERHRIRG 787

Query: 61  RSPAFNALAATFENPNTRNLSTPPP-VRKIYPKSVSPDSAKLAAAKSTIAALGASFEQPP 120
           RSPAF A+A+ FENP+TR LSTPPP V+K++P+S   +  K ++ +S I AL ++FE P 
Sbjct: 788 RSPAFTAIASAFENPSTRYLSTPPPAVKKLFPRSGGSELPKTSSKQSAINALTSAFEGP- 847

Query: 121 PAREAIIPHSIKEPPKXXXXXNNNGEVNDKEKQNSKTVGIETLTIQEDVKEGEAEDDEGL 180
              ++ IP S+K  P                 +  K +  E  TI E   E E EDDE  
Sbjct: 848 --TKSTIPKSVKASP-----------------EAEKAIQEEGSTIGE--SENEPEDDENS 907

Query: 181 AIYPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKFRMTKDAFYKLPKWKQNKHKMALQ 240
            IYPY+RL TTS DP  DIDVT+RE YLSS EF  KF MT+ +F  LPKWKQN+ K  LQ
Sbjct: 908 TIYPYERLTTTSDDPAPDIDVTKREVYLSSVEFTEKFGMTRASFKNLPKWKQNRLKSDLQ 946

[Close]

BLAST of Carg23920 vs. Swiss-Prot
Match: sp|B8ATT7|VLN4_ORYSI (Villin-4 OS=Oryza sativa subsp. indica OX=39946 GN=VLN4 PE=3 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 2.8e-54
Identity = 130/242 (53.72%), Postives = 161/242 (66.53%), Query Frame = 0


Query: 1   MHGNSFQRKLTIVKSGGTPALDKPKRRTPVSYGGRSAVPDKS-QRSRSMSFSPERVRVRG 60
           MHG+S+QRKL IVK G TP+LDKPKRRTP ++ GR+A  DKS QR+RSMS SPER R+RG
Sbjct: 728 MHGSSYQRKLAIVKGGATPSLDKPKRRTP-AFSGRNAGQDKSQQRTRSMSHSPERHRIRG 787

Query: 61  RSPAFNALAATFENPNTRNLSTPPP-VRKIYPKSVSPDSAKLAAAKSTIAALGASFEQPP 120
           RSPAF A+A+ FENP+TR LSTPPP V+K++P+S   +  K ++ +S I AL ++FE P 
Sbjct: 788 RSPAFTAIASAFENPSTRYLSTPPPAVKKLFPRSGGSELPKTSSKQSAINALTSAFEGP- 847

Query: 121 PAREAIIPHSIKEPPKXXXXXNNNGEVNDKEKQNSKTVGIETLTIQEDVKEGEAEDDEGL 180
              ++ IP S+K  P                 +  K +  E  TI E   E E EDDE  
Sbjct: 848 --TKSTIPKSVKVSP-----------------EAEKAIQEEGSTIGE--SENEPEDDENS 907

Query: 181 AIYPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKFRMTKDAFYKLPKWKQNKHKMALQ 240
            IYPY+RL TTS DP  DIDVT+RE YLSS EF  KF MT+ +F  LPKWKQN+ K  LQ
Sbjct: 908 TIYPYERLTTTSDDPAPDIDVTKREVYLSSVEFAEKFGMTRASFKNLPKWKQNRLKSDLQ 946

[Close]

BLAST of Carg23920 vs. TrEMBL
Match: tr|A0A1S4DZL1|A0A1S4DZL1_CUCME (villin-4-like OS=Cucumis melo OX=3656 GN=LOC103499158 PE=4 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 6.2e-91
Identity = 195/247 (78.95%), Postives = 203/247 (82.19%), Query Frame = 0


Query: 1   MHGNSFQRKLTIVKSGGTPALDKPKRRTPVSYGGRSAVPDKSQRSRSMSFSPERVRVRGR 60
           MHGNSFQRKLTIVKSGGTP +DKPKRRTPVSYGGRSAVPDKSQRSRSMSFSPERVRVRGR
Sbjct: 666 MHGNSFQRKLTIVKSGGTPTVDKPKRRTPVSYGGRSAVPDKSQRSRSMSFSPERVRVRGR 725

Query: 61  SPAFNALAATFENPNTRNLSTPPP-VRKIYPKSVSPDSAKLAAAKST-IAALGASFEQPP 120
           SPAFNALAA FENPN RNLSTPPP VRKIYPKS++PDSAKL +AKST IAAL ASFEQPP
Sbjct: 726 SPAFNALAANFENPNARNLSTPPPVVRKIYPKSMTPDSAKLVSAKSTSIAALSASFEQPP 785

Query: 121 PAREAIIPHSIKEPP-----KXXXXXNNNGEVNDKEKQNSKTVGIETLTIQEDVKEGEAE 180
           PAREAIIP SIK  P      XXXXX                         EDVKEGEAE
Sbjct: 786 PAREAIIPRSIKVTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDVKEGEAE 845

Query: 181 DDEGLAIYPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKFRMTKDAFYKLPKWKQNKH 240
           DD+GL IYPY+RLKTTSTDP+SDIDVT+RETYLSSEEFR KF MTKDAFYKLPKWKQNKH
Sbjct: 846 DDDGLTIYPYERLKTTSTDPVSDIDVTKRETYLSSEEFRQKFGMTKDAFYKLPKWKQNKH 905

[Close]

BLAST of Carg23920 vs. TrEMBL
Match: tr|A0A0A0LHB4|A0A0A0LHB4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060390 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 8.1e-91
Identity = 195/250 (78.00%), Postives = 204/250 (81.60%), Query Frame = 0


Query: 1   MHGNSFQRKLTIVKSGGTPALDKPKRRTPVSYGGRSAVPDKSQRSRSMSFSPERVRVRGR 60
           MHGNSFQRKLTIVKSGGTP +DKPKRRTPVSYGGRSAVPDKSQRSRSMSFSPERVRVRGR
Sbjct: 725 MHGNSFQRKLTIVKSGGTPTVDKPKRRTPVSYGGRSAVPDKSQRSRSMSFSPERVRVRGR 784

Query: 61  SPAFNALAATFENPNTRNLSTPPP-VRKIYPKSVSPDSAKLAAAKST-IAALGASFEQPP 120
           SPAFNALAA FENPN RNLSTPPP VRKIYPKS+SPDSAKL +AKST IA+L ASFEQPP
Sbjct: 785 SPAFNALAANFENPNARNLSTPPPVVRKIYPKSMSPDSAKLVSAKSTSIASLSASFEQPP 844

Query: 121 PAREAIIPHSIKEPP--------KXXXXXNNNGEVNDKEKQNSKTVGIETLTIQEDVKEG 180
           PAREAIIP SIK  P         XXXXX                       IQEDVKEG
Sbjct: 845 PAREAIIPRSIKVTPVTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQEDVKEG 904

Query: 181 EAEDDEGLAIYPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKFRMTKDAFYKLPKWKQ 240
           EAEDD+GL  YPY+RLKTTSTDP+SDIDVT+RETYLSSEEFR KF MTK+AFYKLPKWKQ
Sbjct: 905 EAEDDDGLTTYPYERLKTTSTDPVSDIDVTKRETYLSSEEFRQKFGMTKEAFYKLPKWKQ 964

[Close]

BLAST of Carg23920 vs. TrEMBL
Match: tr|A0A2I4G6D8|A0A2I4G6D8_9ROSI (villin-4-like OS=Juglans regia OX=51240 GN=LOC109005119 PE=4 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 2.9e-88
Identity = 179/241 (74.27%), Postives = 202/241 (83.82%), Query Frame = 0


Query: 1   MHGNSFQRKLTIVKSGGTPALDKPKRRTPVSYGGRSAVPDKSQRSRSMSFSPERVRVRGR 60
           M GNSFQRKLT+VKSGGTP +DKPKRRTPVSYGGRS+VPDKSQRSRSMSFSP+RVRVRGR
Sbjct: 725 MLGNSFQRKLTLVKSGGTPTVDKPKRRTPVSYGGRSSVPDKSQRSRSMSFSPDRVRVRGR 784

Query: 61  SPAFNALAATFENPNTRNLSTPPP-VRKIYPKSVSPDSAKLAAAKSTIAALGASFEQPPP 120
           SPAFNALAA FENPN RNLSTPPP VRK+YP+SV+PDS  LA+  S IA L ++FEQPPP
Sbjct: 785 SPAFNALAANFENPNARNLSTPPPVVRKLYPRSVTPDSGNLASKPSGIATLSSTFEQPPP 844

Query: 121 AREAIIPHSIKEPPKXXXXXNNNGEVNDKEKQNSKTVGIETLTIQEDVKEGEAEDDEGLA 180
           AREAIIP S+K  P          E NDKE  NS +  +E+LTI+EDVKEGE ED+EGL 
Sbjct: 845 AREAIIPRSLKVSP---VAPKQKPETNDKE--NSISRKLESLTIREDVKEGEVEDEEGLP 904

Query: 181 IYPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKFRMTKDAFYKLPKWKQNKHKMALQL 240
           +YPY+RLK TS+DPI++IDVT+RETYLSS EFR KF MTKD F+KLPKWKQNK KMALQL
Sbjct: 905 VYPYERLKITSSDPITEIDVTKRETYLSSTEFREKFGMTKDVFFKLPKWKQNKLKMALQL 960

[Close]

BLAST of Carg23920 vs. TrEMBL
Match: tr|A0A0D2QQT5|A0A0D2QQT5_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G026700 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.2e-86
Identity = 182/243 (74.90%), Postives = 202/243 (83.13%), Query Frame = 0


Query: 1   MHGNSFQRKLTIVKSGGTPALDKPKRRTPVSYGGR-SAVPDKSQRSRSMSFSPERVRVRG 60
           MHGNSFQRKLTIVK+GGTP +DKPKRRTPVSYGGR S+VPD+SQRSRSMSFSPERVRVRG
Sbjct: 725 MHGNSFQRKLTIVKTGGTPTVDKPKRRTPVSYGGRSSSVPDRSQRSRSMSFSPERVRVRG 784

Query: 61  RSPAFNALAATFENPNTRNLSTPPP-VRKIYPKSVSPDSAKLAAAKSTIAALGASFE-QP 120
           RSPAFNALAA FENPN RNLSTPPP V+K+YPKSV+PDSAK +AA   IAAL ASFE QP
Sbjct: 785 RSPAFNALAAAFENPNARNLSTPPPVVKKLYPKSVTPDSAKKSAA---IAALTASFEKQP 844

Query: 121 PPAREAIIPHSIKEPPKXXXXXNNNGEVNDKEKQNSKTVGIETLTIQEDVKEGEAEDDEG 180
           PPARE IIP S+K  P                K+NS +  +E+LTIQED KEGEAED+EG
Sbjct: 845 PPARETIIPRSVKVSP---PTPKTXXXXXXXXKENSMSSKLESLTIQEDAKEGEAEDEEG 904

Query: 181 LAIYPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKFRMTKDAFYKLPKWKQNKHKMAL 240
           L IYPY+RLK TSTDP+S+IDVT+RETYLSSEEF+ KF M KD+FYKLPKWKQNK KMAL
Sbjct: 905 LPIYPYERLKITSTDPVSEIDVTKRETYLSSEEFKEKFGMKKDSFYKLPKWKQNKLKMAL 961

[Close]

BLAST of Carg23920 vs. TrEMBL
Match: tr|A0A218N7J3|A0A218N7J3_GOSHI (Villin protein OS=Gossypium hirsutum OX=3635 GN=VLN4 PE=2 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 4.6e-86
Identity = 184/243 (75.72%), Postives = 201/243 (82.72%), Query Frame = 0


Query: 1   MHGNSFQRKLTIVKSGGTPALDKPKRRTPVSYGGR-SAVPDKSQRSRSMSFSPERVRVRG 60
           MHGNSFQRKLTIVK+GGTP +DKPKRRTPVSYGGR S+VPD+SQRSRSMSFSPERVRVRG
Sbjct: 725 MHGNSFQRKLTIVKTGGTPTVDKPKRRTPVSYGGRSSSVPDRSQRSRSMSFSPERVRVRG 784

Query: 61  RSPAFNALAATFENPNTRNLSTPPP-VRKIYPKSVSPDSAKLAAAKSTIAALGASFE-QP 120
           RSPAFNALAA FENPN RNLSTPPP V+K+YPKSV+PDSAK +AA   IAAL ASFE QP
Sbjct: 785 RSPAFNALAAAFENPNARNLSTPPPVVKKLYPKSVTPDSAKKSAA---IAALTASFEKQP 844

Query: 121 PPAREAIIPHSIKEPPKXXXXXNNNGEVNDKEKQNSKTVGIETLTIQEDVKEGEAEDDEG 180
           PPARE IIP S+K  P     X            +SK   +E+LTIQED KEGEAED+EG
Sbjct: 845 PPARETIIPRSVKVSPPTPKTXXXXXXXXXXXXXSSK---LESLTIQEDAKEGEAEDEEG 904

Query: 181 LAIYPYDRLKTTSTDPISDIDVTRRETYLSSEEFRAKFRMTKDAFYKLPKWKQNKHKMAL 240
           L IYPY+RLK TSTDP+S+IDVTRRETYLSSEEF+ KF M KDAFYKLPKWKQNK KMAL
Sbjct: 905 LPIYPYERLKITSTDPVSEIDVTRRETYLSSEEFKEKFGMKKDAFYKLPKWKQNKLKMAL 961

The following BLAST results are available for this feature:

BLAST of Carg23920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929555.1	7.1e-123	99.58	villin-4-like isoform X2 [Cucurbita moschata]	[more]
XP_022929553.1	7.1e-123	99.58	villin-4-like isoform X1 [Cucurbita moschata] >XP_022929554.1 villin-4-like isof...	[more]
XP_023521364.1	3.5e-122	99.17	villin-4-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023545664.1 villin-4-l...	[more]
XP_023521363.1	3.5e-122	99.17	villin-4-like isoform X1 [Cucurbita pepo subsp. pepo] >XP_023545663.1 villin-4-l...	[more]
XP_022997656.1	1.0e-121	96.67	villin-4-like isoform X1 [Cucurbita maxima] >XP_022997657.1 villin-4-like isofor...	[more]

BLAST of Carg23920 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G30160.2	1.3e-75	67.33	villin 4	[more]
AT5G57320.1	5.5e-37	44.72	villin, putative	[more]
AT2G29890.3	6.8e-11	28.05	villin-like 1	[more]
AT2G41740.1	7.5e-10	41.10	villin 2	[more]
AT3G57410.1	2.2e-09	48.33	villin 3	[more]

BLAST of Carg23920 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O65570\|VILI4_ARATH	2.4e-74	67.33	Villin-4 OS=Arabidopsis thaliana OX=3702 GN=VLN4 PE=1 SV=1	[more]
sp\|Q0J716\|VLN5_ORYSJ	2.1e-73	64.32	Villin-5 OS=Oryza sativa subsp. japonica OX=39947 GN=VLN5 PE=3 SV=1	[more]
sp\|Q67U26\|VLN3_ORYSJ	2.4e-69	61.13	Villin-3 OS=Oryza sativa subsp. japonica OX=39947 GN=VLN3 PE=2 SV=2	[more]
sp\|Q0JAD9\|VLN4_ORYSJ	2.1e-54	53.72	Villin-4 OS=Oryza sativa subsp. japonica OX=39947 GN=VLN4 PE=3 SV=1	[more]
sp\|B8ATT7\|VLN4_ORYSI	2.8e-54	53.72	Villin-4 OS=Oryza sativa subsp. indica OX=39946 GN=VLN4 PE=3 SV=1	[more]

BLAST of Carg23920 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DZL1\|A0A1S4DZL1_CUCME	6.2e-91	78.95	villin-4-like OS=Cucumis melo OX=3656 GN=LOC103499158 PE=4 SV=1	[more]
tr\|A0A0A0LHB4\|A0A0A0LHB4_CUCSA	8.1e-91	78.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G060390 PE=4 SV=1	[more]
tr\|A0A2I4G6D8\|A0A2I4G6D8_9ROSI	2.9e-88	74.27	villin-4-like OS=Juglans regia OX=51240 GN=LOC109005119 PE=4 SV=1	[more]
tr\|A0A0D2QQT5\|A0A0D2QQT5_GOSRA	1.2e-86	74.90	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_004G026700 PE=4 ...	[more]
tr\|A0A218N7J3\|A0A218N7J3_GOSHI	4.6e-86	75.72	Villin protein OS=Gossypium hirsutum OX=3635 GN=VLN4 PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0051015	actin filament binding
GO:0003779	actin binding

Vocabulary: **Biological Process**
Term	Definition
GO:0051017	actin filament bundle assembly
GO:0007010	cytoskeleton organization

Vocabulary: **INTERPRO**
Term	Definition
IPR007122	Villin/Gelsolin
IPR030009	Villin-2/3/4/5_plant
IPR036886	Villin_headpiece_dom_sf
IPR003128	Villin_headpiece

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051017	actin filament bundle assembly
biological_process	GO:0007010	cytoskeleton organization
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0051015	actin filament binding
molecular_function	GO:0003779	actin binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23920-RA	Carg23920-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003128	Villin headpiece	SMART	SM00153	VHP_1	coord: 205..240 e-value: 1.2E-14 score: 64.6
IPR003128	Villin headpiece	PFAM	PF02209	VHP	coord: 205..240 e-value: 1.8E-14 score: 53.4
IPR003128	Villin headpiece	PROSITE	PS51089	HP	coord: 175..240 score: 19.938
IPR036886	Villin headpiece domain superfamily	GENE3D	G3DSA:1.10.950.10		coord: 178..240 e-value: 6.2E-21 score: 76.0
IPR036886	Villin headpiece domain superfamily	SUPERFAMILY	SSF47050	VHP, Villin headpiece domain	coord: 165..240
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..152
IPR030009	Villin-2/3/4/5, plant	PANTHER	PTHR11977:SF51	VILLIN-4-RELATED	coord: 1..240
IPR007122	Villin/Gelsolin	PANTHER	PTHR11977	VILLIN	coord: 1..240

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23920	CmaCh12G008970	Cucurbita maxima (Rimu)	carcmaB0870
Carg23920	CmoCh12G009040	Cucurbita moschata (Rifu)	carcmoB0847
Carg23920	Cla97C11G217900	Watermelon (97103) v2	carwmbB0644
Carg23920	Bhi06G001101	Wax gourd	carwgoB0735

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg23920	Carg24208	Silver-seed gourd	carcarB547

The following block(s) are covering this gene:

None