Carg23735 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23735
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein high chlorophyll fluorescent 107-like
Location	Cucurbita_argyrosperma_scaffold_213 : 268614 .. 273425 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGCTGAATCCGTCGAACAAATTCCAGAGATAAAAAAAGAAAAAAAAAAAAAATGCAAGTCTTCTCTTCATCTCCTTCAACCACAAGCTTTAATCTGTTCTCTTCATCTCAAAATCCGAACAATCTCTCGAAATACAGGTGCAAAAATTTGATTATACCTCTCCATTTCGCTCCGAGTTCCCTCTCCGTTTGCTGTTCTTCGAGGGAGTCCTCGACGGCGGTTATCTCCTCCGATCGGTCGTTGGATGGCGAGAACAGAGAGGCGTCGGAGGAGGTTCTTAGAGTTCGGCGGCCGGAGTTTACCGGTGAAGATTCCGGCGACGGCGAGGAGGCGGAAGATGAGAGGAGTTCTTCGGTGATAGAACTAGGGCTAGCGGAGATTGCGAAGAAGATGCCGATATTTGAACCGGAGAATCGGGTGGATTCGAGTGCCCTAGAAAGGCCGCTGATTATCAATTTGGATTTGGCGTTGTACAAAGCGAAGATGATGGCGAGGAATTTTCTGTATGATGAAGCACGGCAAGTCCTTCAGAAGGTATTTTTCTCTCAGAAATTTAGGATTCCTTTATTAATTTTAATCCTTCGTAACTTCACAAATTTAGTTTTTGGTTCTATTATATATGAAATTCAAAAAGTTAGAAGCATTTTTTTTATAATAAAATACTGGGGCTGAATTTAGCGCGTGATTTGGTTGGGAAAGTGTATAGATAAATGGCCGGAGGATGGGCGGGCATACGTAGCATTGGGGAAGATGTTGAGCAAGCAAATGAAAGCAGCCGACGCCAGAGCTGTGTATGAGAGAGGCTGCCAAGCCACCCAAGGCGAGAACTCCTACATTTGGCAGGTCAGTTTGAATCCTGCCTTATATGAGCACAAAGTTATCTCTCTACTTTTTCCTTAGAGAATTTTATAGCTTCGTAGTAACAATTTGGACATACGTTTCAAGCTCTTCATTCAAGATTGTGTTAGGAACCACGACTTTCTACAATTGTATGATGTTATCCACTTTGAGCATAACCTCTCGTGGTTTTACTTTTGGTTTCCTCCAAAAGGCATCATACCAATTGAGATGTATTCCTTACTTATAAACTCAGGATCGTCTTCTTAATTAGTCAATGTGGGACTCCCTCCCAACAATCTTCCCTCGAACAAAATACACCATAGAGCCTCCCCTGAGACCTATAAAACTCTTGAACAGCCTCCTCTTAATTGAGGCTCAACTCCTTTCTTTGGAGCCCTCGAACAAAATACACCCTTTGTTCGACATTTGAGGATTCTATTGACATGACTAAGTTAAGGGCATGATTATGATACCATGTTAAGAATCACGAACTTCTACAATAGTATGATATTGTCCACTTTGAGCATACGCTCTCATGGATTTGCTTTTAGTTTCCTCAAAGGATCTCATGCTAATGGAGATGTATTCCTTACTTATAAGCCCATTAATCATCCTCTTAATTAGCCAATGTAGAACTCCCTCTCAACAATCCTCAACCGATTATATGCTAAATTTAGGGACTTAAAAACCCTTGTTGTCTCTCGAAGCGGAGTAGAGCTTGTCGAAGACGAGTAGAGTGGAGTGTGAAAAAAAAAATCATTTTGTGTTAACTGATACACCGATTCATAAGCAGTTTTGGTCAAAGAAACCAACCGAAACCGACCCGCTTTCACCCCTTGATAGACCAAAAAAAACAAGCTGAATTGGGCTATAATGAAATATTTGGAAACAGGTTTATGTTACATCTTCTCAAATTTTAGCCACTAATTGCACACTTGATATAGTGCTGGGCTGTTCTGGAGAGCAGGATGGGGAATATCAGGAAAGCAAGAGAGCTCTTTGATGCAGCCACAGTAGCCAACAAGAAGCACATTGCCGCATGGCATGGCTGGGCTGTGCTAGAGCTAAAGCAGGGGAACCTCAAGAAGGCCAGGAATCTACTAGCCAAAGGCCTCAAATACTGTGGTGGGAATGAGTATATCTATCAAACACTCGCCCTGCTCGAAGCCAAATCGAATCGCTACGAGCAGGCGCGTTATTTGTTTAAGCAGGCTACCAAGTGCAACCCCAAAAGCTGTGCTAGTTGGCTTGTAAGTTCTTTTACTCCCCATTTTCCATTGCCCTGATTCTGTTTCGAAATTTGGTCATTACTTTCATCTCCCAAATCCCCTCAGTAATTTGGACATGATCATGGTATGGCAGGCATGGGCGCAGCTGGAGATGCAGCGGGAGAACAACCTTCTTGCTAGACAACTATTTGAGGTGACTTTGATTTCCCTTTTCTTGTTTAACTGTTGTTAAGTTCTTAGTAGATCCTTTCATTTCCCTCATTAACAAGTTCATTTGTTTCTTTGTTACCTAGAAAGCCATCCAGGCGAGCCCCAAGAACAGATTTGCGTGGCACATATGGGGACTCTTTGAAGCTAATATAGGAAATATCGAGAAGGGAAGGAAACTTTTAAAGATAGGCCATGTCCTAAATCCAAGAGACCCTGTTCTTCTTCAGTCTCTTGGTTTATTGGAGTATAAAAACTCCTCTGCAAGCATGGCTCGAGTTTTGTTTAGGAGAGCATCTGAACTGGACCCCAAGCACCAACCAGTGTGGATTGTAAGTTAATATCCTTTCCCTTGTTGAAGGATTTTCCACTCAAATTCTGATCAGAATTTTTGTTGGGGTTCCATTTTTCTTGACAAAACTTAAACCATGGCTTATGCAGGCTTGGGGATGGATGGAATGGAAAGAAGGTAACATAGGGAAAGCAAGGGAGCTGTATCAAAGAGCATTGTTAATTGATTCGGCCAGTGAGAGTGCAGCTCGATGCCTTCAGGTAGACAAATGCTAGTTGAATTATAAATTGAAAGCGGTCTGTAACCGTCCAAGTCCATCGTTAGCAAATATTGTCTTCTTTGGCTTTATCTTTCAGGCTTTCCCTCAAGGTTTTTAAAACGTGTCTACTATGGAGAGGATCTAGCCTTACTTTAACCAGTGCCCCACGCTGTTCAGTGACTGGCTCTAATATCATTTGTAACAGCTCAAGCCCACCGCTAGCAGGATATTGTTCCGCTTTGACTCGTTACGTATCGCCGTCAGCCTCACGATTTTAAAACACGCATGTTAGGGAGAGACTTCCACACTCTTATAAACAATGCTTTGTTCCTCTCTCCAACGGGCCAAAATAGATCTCACACTTCACTTTCCTTAGGAGGCCTAGCAACCTCGTTGGCATACCATCTGGAACCTAGCTCTGATACCATTTGTAATAGTGCAAACCTACCACTAGCAGATATTGTCCTCTTTGGGCGGTGTGCCAATGAAGACACTGGACCCCCAAGGGGGTGGATTGTGAGAGACGCGTTTTAAAACCGTAAGGCTAACAGCGATACGTAACAGGCCAATGCGGACAATATCTATTAGCGGTAGGTTTGGGTTGTTACAAATGGTATCAGAACCAGATTATTGGATAGTGTGCCAGCAAGGACACTGGTCCCCAAGGAGGGTGGATTGTAAGATCCCACATTGGTTGGAGAGGGGAACGAAGCATTCTTTATAAGGGTGTGAAAACCTTTCTCTAGCAAACACGCTTTAAAACCGTAAAATTGATGGCGATACATAACGGGCCAAAATAGACCGGTAGTGGGCTTCTGACAGACACAAGATGGATGAATGGTAGAAGGAAGTAGAAAATGATAGGGAATACTTGTTGGAGTTATGTTCTAATTTTGTTATCAAAGTTCGAGAACATTTAATTCAAGCTTGGAATCAAAATATTACTTACTTCGATTGCTTTAATACAGGCTTGGGGTGTTCTAGAACAGAGAGCAGGCAACCTATCAGCAGCTAGAAGATTATATAGATCCTCTCTAAGCATAAACTCTCAGAGTTATGTAACATGGATGACCTGGGCAGCACTGGAAGATGATCAAGGGAACGCAATCCGAGCAGAGGAAATTCGAAATCTATACTTCCAGCAGGTCAGAACCTCGTTTTTTGAAATTTGACTTAGTTTTTCTGAACCATTGGTAAGTAAATGAAGGCTGTGTTGCAACAGAGAACAGAAGTTGTGGACGATGCCTCGTGGGTTATGGGGATCTTAGACGTTATTGACCCAGCACTTGATAGCATAAAGAGGCTGTTGAAGCTGGAGCAAGACCCCTTCGCCATGTCAAGAGTAGCAGATGGAGGCGCTAGAAACGCCTCATTAGACGACTCGGCTGCCTCCTCTAGTGTGGCTGACAGTGAAACTGGGTTTGATTTGGATGCCTTTATGATGAAAAAGTTGTCGGTAGACACGTCGAAACTCGAAATTCAACTCGAAACAACTCGACCCAAAAGATTTAAGTATCAAAGAAGTCAAATGAGATCAGAAAACAGACCTGAAATGGCTGTTTCACAGAGACAAAGAACAGCATCATCTACTTGAGGATCGATCTCGTAGTTCATTCCAGAGAAAACAAGGTTCTAAATGGAACAAATGTCTTGTAAGTCTAAGCTTCCCTCGTTCATAAAGTTGTTATTATAGCTGCAAGGATCAAGGAAGAAAACACTTCTTTGATGGAGTTCTACATGTCTAAAAGAAGCCATAATGTAAATAACTTTGTAAGTTTATAATTCTTGATGTTCTCTGAGTCCGATCACTCTAATGCTTCTTAGTGGTTTGAGAATACACCCAAGGTATCGATCCAACTCGATTCGTATTGGTTGGATTGAGTTATGAACTTATTTTAGTTTAGTTAATTTTAAATGAGTGAAAATTTGTATGGTTGAATCGAATCAACTTAATTTTTTTTTCATACCATCCATATAACAATCC

mRNA sequence

CAGCTGAATCCGTCGAACAAATTCCAGAGATAAAAAAAGAAAAAAAAAAAAAATGCAAGTCTTCTCTTCATCTCCTTCAACCACAAGCTTTAATCTGTTCTCTTCATCTCAAAATCCGAACAATCTCTCGAAATACAGGTGCAAAAATTTGATTATACCTCTCCATTTCGCTCCGAGTTCCCTCTCCGTTTGCTGTTCTTCGAGGGAGTCCTCGACGGCGGTTATCTCCTCCGATCGGTCGTTGGATGGCGAGAACAGAGAGGCGTCGGAGGAGGTTCTTAGAGTTCGGCGGCCGGAGTTTACCGGTGAAGATTCCGGCGACGGCGAGGAGGCGGAAGATGAGAGGAGTTCTTCGGTGATAGAACTAGGGCTAGCGGAGATTGCGAAGAAGATGCCGATATTTGAACCGGAGAATCGGGTGGATTCGAGTGCCCTAGAAAGGCCGCTGATTATCAATTTGGATTTGGCGTTGTACAAAGCGAAGATGATGGCGAGGAATTTTCTGTATGATGAAGCACGGCAAGTCCTTCAGAAGTGTATAGATAAATGGCCGGAGGATGGGCGGGCATACGTAGCATTGGGGAAGATGTTGAGCAAGCAAATGAAAGCAGCCGACGCCAGAGCTGTGTATGAGAGAGGCTGCCAAGCCACCCAAGGCGAGAACTCCTACATTTGGCAGTGCTGGGCTGTTCTGGAGAGCAGGATGGGGAATATCAGGAAAGCAAGAGAGCTCTTTGATGCAGCCACAGTAGCCAACAAGAAGCACATTGCCGCATGGCATGGCTGGGCTGTGCTAGAGCTAAAGCAGGGGAACCTCAAGAAGGCCAGGAATCTACTAGCCAAAGGCCTCAAATACTGTGGTGGGAATGAGTATATCTATCAAACACTCGCCCTGCTCGAAGCCAAATCGAATCGCTACGAGCAGGCGCGTTATTTGTTTAAGCAGGCTACCAAGTGCAACCCCAAAAGCTGTGCTAGTTGGCTTGCATGGGCGCAGCTGGAGATGCAGCGGGAGAACAACCTTCTTGCTAGACAACTATTTGAGAAAGCCATCCAGGCGAGCCCCAAGAACAGATTTGCGTGGCACATATGGGGACTCTTTGAAGCTAATATAGGAAATATCGAGAAGGGAAGGAAACTTTTAAAGATAGGCCATGTCCTAAATCCAAGAGACCCTGTTCTTCTTCAGTCTCTTGGTTTATTGGAGTATAAAAACTCCTCTGCAAGCATGGCTCGAGTTTTGTTTAGGAGAGCATCTGAACTGGACCCCAAGCACCAACCAGTGTGGATTGCTTGGGGATGGATGGAATGGAAAGAAGGTAACATAGGGAAAGCAAGGGAGCTGTATCAAAGAGCATTGTTAATTGATTCGGCCAGTGAGAGTGCAGCTCGATGCCTTCAGGCTTGGGGTGTTCTAGAACAGAGAGCAGGCAACCTATCAGCAGCTAGAAGATTATATAGATCCTCTCTAAGCATAAACTCTCAGAGTTATGTAACATGGATGACCTGGGCAGCACTGGAAGATGATCAAGGGAACGCAATCCGAGCAGAGGAAATTCGAAATCTATACTTCCAGCAGAGAACAGAAGTTGTGGACGATGCCTCGTGGGTTATGGGGATCTTAGACGTTATTGACCCAGCACTTGATAGCATAAAGAGGCTGTTGAAGCTGGAGCAAGACCCCTTCGCCATGTCAAGAGTAGCAGATGGAGGCGCTAGAAACGCCTCATTAGACGACTCGGCTGCCTCCTCTAGTGTGGCTGACAGTGAAACTGGGTTTGATTTGGATGCCTTTATGATGAAAAAGTTGTCGGTAGACACGTCGAAACTCGAAATTCAACTCGAAACAACTCGACCCAAAAGATTTAAGTATCAAAGAAGTCAAATGAGATCAGAAAACAGACCTGAAATGGCTGTTTCACAGAGACAAAGAACAGCATCATCTACTTGAGGATCGATCTCGTAGTTCATTCCAGAGAAAACAAGGTTCTAAATGGAACAAATGTCTTGTAAGTCTAAGCTTCCCTCGTTCATAAAGTTGTTATTATAGCTGCAAGGATCAAGGAAGAAAACACTTCTTTGATGGAGTTCTACATGTCTAAAAGAAGCCATAATGTAAATAACTTTGTAAGTTTATAATTCTTGATGTTCTCTGAGTCCGATCACTCTAATGCTTCTTAGTGGTTTGAGAATACACCCAAGGTATCGATCCAACTCGATTCGTATTGGTTGGATTGAGTTATGAACTTATTTTAGTTTAGTTAATTTTAAATGAGTGAAAATTTGTATGGTTGAATCGAATCAACTTAATTTTTTTTTCATACCATCCATATAACAATCC

Coding sequence (CDS)

ATGCAAGTCTTCTCTTCATCTCCTTCAACCACAAGCTTTAATCTGTTCTCTTCATCTCAAAATCCGAACAATCTCTCGAAATACAGGTGCAAAAATTTGATTATACCTCTCCATTTCGCTCCGAGTTCCCTCTCCGTTTGCTGTTCTTCGAGGGAGTCCTCGACGGCGGTTATCTCCTCCGATCGGTCGTTGGATGGCGAGAACAGAGAGGCGTCGGAGGAGGTTCTTAGAGTTCGGCGGCCGGAGTTTACCGGTGAAGATTCCGGCGACGGCGAGGAGGCGGAAGATGAGAGGAGTTCTTCGGTGATAGAACTAGGGCTAGCGGAGATTGCGAAGAAGATGCCGATATTTGAACCGGAGAATCGGGTGGATTCGAGTGCCCTAGAAAGGCCGCTGATTATCAATTTGGATTTGGCGTTGTACAAAGCGAAGATGATGGCGAGGAATTTTCTGTATGATGAAGCACGGCAAGTCCTTCAGAAGTGTATAGATAAATGGCCGGAGGATGGGCGGGCATACGTAGCATTGGGGAAGATGTTGAGCAAGCAAATGAAAGCAGCCGACGCCAGAGCTGTGTATGAGAGAGGCTGCCAAGCCACCCAAGGCGAGAACTCCTACATTTGGCAGTGCTGGGCTGTTCTGGAGAGCAGGATGGGGAATATCAGGAAAGCAAGAGAGCTCTTTGATGCAGCCACAGTAGCCAACAAGAAGCACATTGCCGCATGGCATGGCTGGGCTGTGCTAGAGCTAAAGCAGGGGAACCTCAAGAAGGCCAGGAATCTACTAGCCAAAGGCCTCAAATACTGTGGTGGGAATGAGTATATCTATCAAACACTCGCCCTGCTCGAAGCCAAATCGAATCGCTACGAGCAGGCGCGTTATTTGTTTAAGCAGGCTACCAAGTGCAACCCCAAAAGCTGTGCTAGTTGGCTTGCATGGGCGCAGCTGGAGATGCAGCGGGAGAACAACCTTCTTGCTAGACAACTATTTGAGAAAGCCATCCAGGCGAGCCCCAAGAACAGATTTGCGTGGCACATATGGGGACTCTTTGAAGCTAATATAGGAAATATCGAGAAGGGAAGGAAACTTTTAAAGATAGGCCATGTCCTAAATCCAAGAGACCCTGTTCTTCTTCAGTCTCTTGGTTTATTGGAGTATAAAAACTCCTCTGCAAGCATGGCTCGAGTTTTGTTTAGGAGAGCATCTGAACTGGACCCCAAGCACCAACCAGTGTGGATTGCTTGGGGATGGATGGAATGGAAAGAAGGTAACATAGGGAAAGCAAGGGAGCTGTATCAAAGAGCATTGTTAATTGATTCGGCCAGTGAGAGTGCAGCTCGATGCCTTCAGGCTTGGGGTGTTCTAGAACAGAGAGCAGGCAACCTATCAGCAGCTAGAAGATTATATAGATCCTCTCTAAGCATAAACTCTCAGAGTTATGTAACATGGATGACCTGGGCAGCACTGGAAGATGATCAAGGGAACGCAATCCGAGCAGAGGAAATTCGAAATCTATACTTCCAGCAGAGAACAGAAGTTGTGGACGATGCCTCGTGGGTTATGGGGATCTTAGACGTTATTGACCCAGCACTTGATAGCATAAAGAGGCTGTTGAAGCTGGAGCAAGACCCCTTCGCCATGTCAAGAGTAGCAGATGGAGGCGCTAGAAACGCCTCATTAGACGACTCGGCTGCCTCCTCTAGTGTGGCTGACAGTGAAACTGGGTTTGATTTGGATGCCTTTATGATGAAAAAGTTGTCGGTAGACACGTCGAAACTCGAAATTCAACTCGAAACAACTCGACCCAAAAGATTTAAGTATCAAAGAAGTCAAATGAGATCAGAAAACAGACCTGAAATGGCTGTTTCACAGAGACAAAGAACAGCATCATCTACTTGA

Protein sequence

MQVFSSSPSTTSFNLFSSSQNPNNLSKYRCKNLIIPLHFAPSSLSVCCSSRESSTAVISSDRSLDGENREASEEVLRVRRPEFTGEDSGDGEEAEDERSSSVIELGLAEIAKKMPIFEPENRVDSSALERPLIINLDLALYKAKMMARNFLYDEARQVLQKCIDKWPEDGRAYVALGKMLSKQMKAADARAVYERGCQATQGENSYIWQCWAVLESRMGNIRKARELFDAATVANKKHIAAWHGWAVLELKQGNLKKARNLLAKGLKYCGGNEYIYQTLALLEAKSNRYEQARYLFKQATKCNPKSCASWLAWAQLEMQRENNLLARQLFEKAIQASPKNRFAWHIWGLFEANIGNIEKGRKLLKIGHVLNPRDPVLLQSLGLLEYKNSSASMARVLFRRASELDPKHQPVWIAWGWMEWKEGNIGKARELYQRALLIDSASESAARCLQAWGVLEQRAGNLSAARRLYRSSLSINSQSYVTWMTWAALEDDQGNAIRAEEIRNLYFQQRTEVVDDASWVMGILDVIDPALDSIKRLLKLEQDPFAMSRVADGGARNASLDDSAASSSVADSETGFDLDAFMMKKLSVDTSKLEIQLETTRPKRFKYQRSQMRSENRPEMAVSQRQRTASST

Homology

[Close]

BLAST of Carg23735 vs. NCBI nr
Match: XP_023540782.1 (protein high chlorophyll fluorescent 107 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 658.7 bits (1698), Expect = 2.0e-185
Identity = 625/634 (98.58%), Postives = 629/634 (99.21%), Query Frame = 0


Query: 1   MQVFSSSPSTTSFNLFSSSQNPNNLSKYRCKNLIIPLHFAPSSLSVCCSSRESSTAVISS 60
           MQVFSSSPSTTSFNLFSSSQNPNNLSKYRCKNLIIPLHFAPSSLSVCCSSRESSTAV+SS
Sbjct: 1   MQVFSSSPSTTSFNLFSSSQNPNNLSKYRCKNLIIPLHFAPSSLSVCCSSRESSTAVLSS 60

Query: 61  DRSLDGENREASEEVLRVRRP--EFTGEDSGDGEEAEDERSSSVIELGLAEIAKKMPIFE 120
           DRSLDGENREASEEVLRVRRP  EFTGEDSGDGEEAEDE SSSVIELGLAEIAKKMPIFE
Sbjct: 61  DRSLDGENREASEEVLRVRRPVMEFTGEDSGDGEEAEDE-SSSVIELGLAEIAKKMPIFE 120

Query: 121 PENRVDSSALERPLIINLDLALYKAKMMARNFLYDEARQVLQKCIDKWPEDGRAYVALGK 180
           PENRVDSSALERPLIINLDLALYKAKMMARNFLYDEARQVLQKCIDKWPEDGRAYVALGK
Sbjct: 121 PENRVDSSALERPLIINLDLALYKAKMMARNFLYDEARQVLQKCIDKWPEDGRAYVALGK 180

Query: 181 MLSKQMKAADARAVYERGCQATQGENSYIWQCWAVLESRMGNIRKARELFDAATVANKKH 240
           MLSKQMKAADARAVYERGCQATQGENSYIWQCWAVLESRMGNIRKARELFDAATVANKKH
Sbjct: 181 MLSKQMKAADARAVYERGCQATQGENSYIWQCWAVLESRMGNIRKARELFDAATVANKKH 240

Query: 241 IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXASESAARCLQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXASESAARCLQXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXASESAARCLQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XYVTWMTWAALEDDQGNAIRAEEIRNLYFQQRTEVVDDASWVMGILDVIDPALDSIKRLL 540
           XYVTWMTWAALEDDQGNAIRAEEIRNLYFQQRTEVVDDASWVMGILDVIDPALDSIKRLL
Sbjct: 481 XYVTWMTWAALEDDQGNAIRAEEIRNLYFQQRTEVVDDASWVMGILDVIDPALDSIKRLL 540

Query: 541 KLEQDPFAMSRVADGGARNASLDDSAASSSVADSETGFDLDAFMMKKLSVDTSKLEIQLE 600
           KLEQDPFAMSRVAD GARNASLDDSAASSSVADSETGFDLDAFMMKKLS+DTSKLEIQLE
Sbjct: 541 KLEQDPFAMSRVADVGARNASLDDSAASSSVADSETGFDLDAFMMKKLSIDTSKLEIQLE 600

Query: 601 TTRPKRFKYQRSQMRSENRPEMAVSQRQRTASST 633
           TTRPKRFKYQRSQMRSENRPEMAVS+ QRTASS+
Sbjct: 601 TTRPKRFKYQRSQMRSENRPEMAVSESQRTASSS 633

[Close]

BLAST of Carg23735 vs. NCBI nr
Match: XP_022972184.1 (protein high chlorophyll fluorescent 107-like isoform X1 [Cucurbita maxima] >XP_022972185.1 protein high chlorophyll fluorescent 107-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 654.8 bits (1688), Expect = 2.9e-184
Identity = 620/634 (97.79%), Postives = 625/634 (98.58%), Query Frame = 0


Query: 1   MQVFSSSPSTTSFNLFSSSQNPNNLSKYRCKNLIIPLHFAPSSLSVCCSSRESSTAVISS 60
           MQVFSSSPST SFNLFSSSQNPNNLSKYRCKNLIIPLHFAPSS SVCCSSRESSTAV+SS
Sbjct: 1   MQVFSSSPSTASFNLFSSSQNPNNLSKYRCKNLIIPLHFAPSSFSVCCSSRESSTAVLSS 60

Query: 61  DRSLDGENREASEEVLRVRRP--EFTGEDSGDGEEAEDERSSSVIELGLAEIAKKMPIFE 120
           D +LDGE REASEEVLRVRRP  EFTGEDSGDGEEAEDERSSSVIELGLAEIAKKMPIFE
Sbjct: 61  DITLDGEKREASEEVLRVRRPVMEFTGEDSGDGEEAEDERSSSVIELGLAEIAKKMPIFE 120

Query: 121 PENRVDSSALERPLIINLDLALYKAKMMARNFLYDEARQVLQKCIDKWPEDGRAYVALGK 180
           PENRVDSSALERPLIINLDLALYKAKMMARNFLYDEARQVLQKCIDKWPEDGRAYVALGK
Sbjct: 121 PENRVDSSALERPLIINLDLALYKAKMMARNFLYDEARQVLQKCIDKWPEDGRAYVALGK 180

Query: 181 MLSKQMKAADARAVYERGCQATQGENSYIWQCWAVLESRMGNIRKARELFDAATVANKKH 240
           MLSKQMKAADAR VYERGCQATQGENSYIWQCWAVLESRMGNIRKARELFDAATVANKKH
Sbjct: 181 MLSKQMKAADARNVYERGCQATQGENSYIWQCWAVLESRMGNIRKARELFDAATVANKKH 240

Query: 241 IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXASESAARCLQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXASESAARCLQXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXASESAARCLQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XYVTWMTWAALEDDQGNAIRAEEIRNLYFQQRTEVVDDASWVMGILDVIDPALDSIKRLL 540
           XYVTWMTWAALEDDQGNAIRAEEIRNLYFQQRTEVVDDASWVMGILDVIDPALDSIKRLL
Sbjct: 481 XYVTWMTWAALEDDQGNAIRAEEIRNLYFQQRTEVVDDASWVMGILDVIDPALDSIKRLL 540

Query: 541 KLEQDPFAMSRVADGGARNASLDDSAASSSVADSETGFDLDAFMMKKLSVDTSKLEIQLE 600
           KLEQDPFAMSRVADGGARN+SLDDS ASSSVADSETGFDLDAFMMKKLS+DTSKLEIQLE
Sbjct: 541 KLEQDPFAMSRVADGGARNSSLDDSGASSSVADSETGFDLDAFMMKKLSIDTSKLEIQLE 600

Query: 601 TTRPKRFKYQRSQMRSENRPEMAVSQRQRTASST 633
           TTRPKRFKYQRSQMRSENRPEMAVSQ QRTASS+
Sbjct: 601 TTRPKRFKYQRSQMRSENRPEMAVSQSQRTASSS 634

[Close]

BLAST of Carg23735 vs. NCBI nr
Match: XP_022938340.1 (protein high chlorophyll fluorescent 107 [Cucurbita moschata])

HSP 1 Score: 630.2 bits (1624), Expect = 7.7e-177
Identity = 609/634 (96.06%), Postives = 615/634 (97.00%), Query Frame = 0


Query: 1   MQVFSSSPSTTSFNLFSSSQNPNNLSKYRCKNLIIPLHFAPSSLSVCCSSRESSTAVISS 60
           MQVFSSSPSTTSFNLFSSSQNPNNLSKYRCKNLII LHFAPSSLSVCCSSRESSTAV+SS
Sbjct: 1   MQVFSSSPSTTSFNLFSSSQNPNNLSKYRCKNLIISLHFAPSSLSVCCSSRESSTAVLSS 60

Query: 61  DRSLDGENREASEEVLRVRRP--EFTGEDSGDGEEAEDERSSSVIELGLAEIAKKMPIFE 120
           D SLDGENREASEEVLRVRRP  EFTGEDSGDGEEAEDERSSSVIELGLAEIAKKMPIFE
Sbjct: 61  DLSLDGENREASEEVLRVRRPVMEFTGEDSGDGEEAEDERSSSVIELGLAEIAKKMPIFE 120

Query: 121 PENRVDSSALERPLIINLDLALYKAKMMARNFLYDEARQVLQKCIDKWPEDGRAYVALGK 180
           PENRVDSSALERPLIINLDLALYKAKMMARNFLYDEARQVLQKCIDKWPEDGRAYVALGK
Sbjct: 121 PENRVDSSALERPLIINLDLALYKAKMMARNFLYDEARQVLQKCIDKWPEDGRAYVALGK 180

Query: 181 MLSKQMKAADARAVYERGCQATQGENSYIWQCWAVLESRMGNIRKARELFDAATVANKKH 240
           MLSKQMKAADARAVYERGCQATQGENSYIWQCWAVLESRMGNIRKARELFDAATVANKKH
Sbjct: 181 MLSKQMKAADARAVYERGCQATQGENSYIWQCWAVLESRMGNIRKARELFDAATVANKKH 240

Query: 241 IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 IXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXASESAARCLQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXASESAARCLQXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXASESAARCLQXXXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XYVTWMTWAALEDDQGNAIRAEEIRNLYFQQRTEVVDDASWVMGILDVIDPALDSIKRLL 540
           XYVTWMTWAALEDDQGNAIRAEEIRNLYFQQRTEVVDDASWVMGILDVIDPALDSIKRLL
Sbjct: 481 XYVTWMTWAALEDDQGNAIRAEEIRNLYFQQRTEVVDDASWVMGILDVIDPALDSIKRLL 540

Query: 541 KLEQDPFAMSRVADGGARNASLDDSAASSSVADSETGFDLDAFMMKKLSVDTSKLEIQLE 600
           KLEQDPFAMSRVADGGAR++S            SETGFDLDAFMMKKLS+DTSKLEIQLE
Sbjct: 541 KLEQDPFAMSRVADGGARSSSXXXXXXXXXXXXSETGFDLDAFMMKKLSIDTSKLEIQLE 600

Query: 601 TTRPKRFKYQRSQMRSENRPEMAVSQRQRTASST 633
           T +PKRFKYQRSQMRSENRPEMAV Q QRTASS+
Sbjct: 601 TAQPKRFKYQRSQMRSENRPEMAVPQSQRTASSS 634

[Close]

BLAST of Carg23735 vs. NCBI nr
Match: XP_004134505.1 (PREDICTED: psbB mRNA maturation factor Mbb1, chloroplastic isoform X1 [Cucumis sativus] >KGN57167.1 hypothetical protein Csa_3G166320 [Cucumis sativus])

HSP 1 Score: 525.4 bits (1352), Expect = 2.7e-145
Identity = 559/639 (87.48%), Postives = 587/639 (91.86%), Query Frame = 0


Query: 1   MQVFSSSPSTTSFNLFSSSQNPNNLSKYRCKNLIIPLHFAPSSLSV--CCSSRESSTAVI 60
           MQVFSS PST SFNLFSSSQNP NLSKYRCK     LH A +S SV  CCS+R+SSTA +
Sbjct: 1   MQVFSSPPSTASFNLFSSSQNPTNLSKYRCKIFSTHLHSAHNSFSVPPCCSARDSSTAFL 60

Query: 61  SSDRSLDGENREASEEVLRVRRP--EFTGEDSGDGEEAEDERSSSVIELGLAEIAKKMPI 120
            +DRS +  N E SEEV+ +RRP  EF GED    EE E E S+ +I++ L EIAKKMPI
Sbjct: 61  VADRSSERANGETSEEVITIRRPVMEFPGED----EEREVESSTPMIDVRLTEIAKKMPI 120

Query: 121 FEPENRVDSSALERPLIINLDLALYKAKMMARNFLYDEARQVLQKCIDKWPEDGRAYVAL 180
           FEPENRVDSSALERPLIINLDLALY+AKM+ARNF YDEA+QVLQKCI+KWPEDGRAYVAL
Sbjct: 121 FEPENRVDSSALERPLIINLDLALYRAKMLARNFQYDEAQQVLQKCINKWPEDGRAYVAL 180

Query: 181 GKMLSKQMKAADARAVYERGCQATQGENSYIWQCWAVLESRMGNIRKARELFDAATVANK 240
           GKML KQMKAA+A+AVYERGCQATQGENSYIWQCWAVLESRMGNIRKARELFDAATVANK
Sbjct: 181 GKMLGKQMKAAEAKAVYERGCQATQGENSYIWQCWAVLESRMGNIRKARELFDAATVANK 240

Query: 241 KHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           KHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 KHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXASESAARCLQXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXX SESAARCLQXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXDSESAARCLQXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXYVTWMTWAALEDDQGNAIRAEEIRNLYFQQRTEVVDDASWVMGILDVIDPALDSIKR 540
           XXXYVTWMTWAALE+DQGNAIRAEEIRNLYFQQRTEVVDDASWVMG LDVIDPALDSIKR
Sbjct: 481 XXXYVTWMTWAALEEDQGNAIRAEEIRNLYFQQRTEVVDDASWVMGFLDVIDPALDSIKR 540

Query: 541 LLKLEQDPFAMSRVADGGARNASLDDSAASSS---VADSETGFDLDAFMMKKLSVDTSKL 600
           LLKLEQDPF  SR ADGG RN S+DDSAASSS   V +SETGFDLDAF+MKKLS+DTSKL
Sbjct: 541 LLKLEQDPFTASRTADGGPRNTSIDDSAASSSSNNVGESETGFDLDAFIMKKLSIDTSKL 600

Query: 601 EIQLETTRPKRFKYQRSQMRSENRPEMAVSQRQRTASST 633
           EIQ+ETTRPKRFKYQR Q++SENR EMAVS+ Q T SS+
Sbjct: 601 EIQMETTRPKRFKYQRRQLKSENRQEMAVSKSQGTESSS 635

[Close]

BLAST of Carg23735 vs. NCBI nr
Match: XP_008438954.1 (PREDICTED: protein high chlorophyll fluorescent 107 isoform X1 [Cucumis melo] >XP_008438955.1 PREDICTED: protein high chlorophyll fluorescent 107 isoform X1 [Cucumis melo] >XP_008438957.1 PREDICTED: protein high chlorophyll fluorescent 107 isoform X1 [Cucumis melo] >XP_008438959.1 PREDICTED: protein high chlorophyll fluorescent 107 isoform X1 [Cucumis melo])

HSP 1 Score: 518.5 bits (1334), Expect = 3.3e-143
Identity = 557/639 (87.17%), Postives = 585/639 (91.55%), Query Frame = 0


Query: 1   MQVFSSSPSTTSFNLFSSSQNPNNLSKYRCKNLIIPLHFAPSSLSV--CCSSRESSTAVI 60
           MQVFSS PST SFNLFSSSQ+  NLSKYRCK     LH A +SLS+  CCSSR+SSTAV+
Sbjct: 1   MQVFSSPPSTASFNLFSSSQSSTNLSKYRCKIFNTHLHSAHNSLSLPPCCSSRDSSTAVL 60

Query: 61  SSDRSLDGENREASEEVLRVRRP--EFTGEDSGDGEEAEDERSSSVIELGLAEIAKKMPI 120
            +DRS +G N EASEEV+ +RRP  EF  ED    EE E E S+ +I++ L EIAKKMPI
Sbjct: 61  VADRSSEGANGEASEEVITIRRPVMEFPSED----EETEVESSTPMIDVRLTEIAKKMPI 120

Query: 121 FEPENRVDSSALERPLIINLDLALYKAKMMARNFLYDEARQVLQKCIDKWPEDGRAYVAL 180
           FEPENRVDSSALERPLIINLDLALY+AKM+ARNF YDEA+QVLQKCI+KWPEDGRAYVAL
Sbjct: 121 FEPENRVDSSALERPLIINLDLALYRAKMLARNFQYDEAQQVLQKCINKWPEDGRAYVAL 180

Query: 181 GKMLSKQMKAADARAVYERGCQATQGENSYIWQCWAVLESRMGNIRKARELFDAATVANK 240
           GKML KQMKAA+A+AVYERGCQATQGENSYIWQCWAVLESRMGNIRKARELFDAATVANK
Sbjct: 181 GKMLGKQMKAAEAKAVYERGCQATQGENSYIWQCWAVLESRMGNIRKARELFDAATVANK 240

Query: 241 KHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           KHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 KHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXASESAARCLQXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXASESAARCLQXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXASESAARCLQXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXYVTWMTWAALEDDQGNAIRAEEIRNLYFQQRTEVVDDASWVMGILDVIDPALDSIKR 540
           XXXYVTWMTWAALE+DQGNAIRAEEIRNLYFQQRTEVVDDASWVMG LDVIDPALD IKR
Sbjct: 481 XXXYVTWMTWAALEEDQGNAIRAEEIRNLYFQQRTEVVDDASWVMGFLDVIDPALDIIKR 540

Query: 541 LLKLEQDPFAMSRVADGGARNASLD---DSAASSSVADSETGFDLDAFMMKKLSVDTSKL 600
           LLKLEQDPFA SR ADGG RNAS+D          V +SETGFDLDAF+MKKLS+DTSKL
Sbjct: 541 LLKLEQDPFAASRTADGGPRNASMDXXXXXXXXXXVVESETGFDLDAFIMKKLSIDTSKL 600

Query: 601 EIQLETTRPKRFKYQRSQMRSENRPEMAVSQRQRTASST 633
           EIQLETTRPKRFKYQR Q++SENR EMAVS+ QRT SS+
Sbjct: 601 EIQLETTRPKRFKYQRRQLKSENRQEMAVSKSQRTESSS 635

[Close]

BLAST of Carg23735 vs. TAIR10
Match: AT3G17040.1 (high chlorophyll fluorescent 107)

HSP 1 Score: 246.9 bits (629), Expect = 3.3e-65
Identity = 431/637 (67.66%), Postives = 488/637 (76.61%), Query Frame = 0


Query: 5   SSSPS---TTSFNL-FSSSQNPNNLSKYRCK------------NLIIPLHFAPSSLSVCC 64
           SSSPS   T+SF+L F + Q P NL K   K             L  P   + ++     
Sbjct: 11  SSSPSPANTSSFSLSFLTPQIPENLCKSPTKIHIGTHGISGQSFLSHPTFSSKNTYLYAV 70

Query: 65  SSRESSTAVISSDRSLDGENREASEE--VLRVRRPEFTGEDSGDGEEAEDERSSSVIELG 124
             R SS        S +GE  E++ E  VL VRRP     D    EE E ++  + I+ G
Sbjct: 71  VDRSSSGVFSPQKESANGEGEESNTEEGVLVVRRPLLENSDKESSEE-EGKKYPARIDAG 130

Query: 125 LAEIAKKMPIFEPEN---------RVDSSALERPLIINLDLALYKAKMMARNFLYDEARQ 184
           L+ IAKKMPIFEPE                          L+LYKAK++ARNF Y +A +
Sbjct: 131 LSNIAKKMPIFEPERXXXXXXXXXXXXXXXXXXXXXXXXXLSLYKAKVLARNFRYKDAEK 190

Query: 185 VLQKCIDKWPEDGRAYVALGKMLSKQMKAADARAVYERGCQATQGENSYIWQCWAVLESR 244
           +L+KCI  WPEDGR YVALGK+LSKQ K A+AR +YE+GCQ+TQGENSYIWQCWAVLE+R
Sbjct: 191 ILEKCIAYWPEDGRPYVALGKILSKQSKLAEARILYEKGCQSTQGENSYIWQCWAVLENR 250

Query: 245 MGNIRKARELFDAATVANKKHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 304
           +GN+R+ARELFDAATVA+KKH+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 251 LGNVRRARELFDAATVADKKHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 310

Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 364
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 311 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 370

Query: 365 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 424
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 371 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 430

Query: 425 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASESAARCLQXXXXXXX 484
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +ESA+RCLQXXXXXXX
Sbjct: 431 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTESASRCLQXXXXXXX 490

Query: 485 XXXXXXXXXXXXXXXXXXXXXXYVTWMTWAALEDDQGNAIRAEEIRNLYFQQRTEVVDDA 544
           XXXXXXXXXXXXXXXXXXXXX YVTWMTWA LE+DQG+  RAEEIRNLYFQQRTEVVDDA
Sbjct: 491 XXXXXXXXXXXXXXXXXXXXXSYVTWMTWAQLEEDQGDTERAEEIRNLYFQQRTEVVDDA 550

Query: 545 SWVMGILDVIDPALDSIKRLLKLEQDP---------FAMSRVADGGARNASLDDSAASSS 604
           SWV G LD+IDPALD++KRLL   Q+            M+R  D  +++    +S+A   
Sbjct: 551 SWVTGFLDIIDPALDTVKRLLNFGQNNDNNRLTTTLRNMNRTKD--SQSNQQPESSAGRE 610

Query: 605 VADSETGFDLDAFMMKKLSVDTSKLEIQLETTRPKRF 606
             ++ +GF+LD F+  KLS+D  KL++ L++ R +RF
Sbjct: 611 DIETGSGFNLDVFLRSKLSLDPLKLDVNLDSKRLERF 644

[Close]

BLAST of Carg23735 vs. Swiss-Prot
Match: sp|Q8RWG2|CF107_ARATH (Protein high chlorophyll fluorescent 107 OS=Arabidopsis thaliana OX=3702 GN=HCF107 PE=1 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 6.0e-64
Identity = 431/637 (67.66%), Postives = 488/637 (76.61%), Query Frame = 0


Query: 5   SSSPS---TTSFNL-FSSSQNPNNLSKYRCK------------NLIIPLHFAPSSLSVCC 64
           SSSPS   T+SF+L F + Q P NL K   K             L  P   + ++     
Sbjct: 11  SSSPSPANTSSFSLSFLTPQIPENLCKSPTKIHIGTHGISGQSFLSHPTFSSKNTYLYAV 70

Query: 65  SSRESSTAVISSDRSLDGENREASEE--VLRVRRPEFTGEDSGDGEEAEDERSSSVIELG 124
             R SS        S +GE  E++ E  VL VRRP     D    EE E ++  + I+ G
Sbjct: 71  VDRSSSGVFSPQKESANGEGEESNTEEGVLVVRRPLLENSDKESSEE-EGKKYPARIDAG 130

Query: 125 LAEIAKKMPIFEPEN---------RVDSSALERPLIINLDLALYKAKMMARNFLYDEARQ 184
           L+ IAKKMPIFEPE                          L+LYKAK++ARNF Y +A +
Sbjct: 131 LSNIAKKMPIFEPERXXXXXXXXXXXXXXXXXXXXXXXXXLSLYKAKVLARNFRYKDAEK 190

Query: 185 VLQKCIDKWPEDGRAYVALGKMLSKQMKAADARAVYERGCQATQGENSYIWQCWAVLESR 244
           +L+KCI  WPEDGR YVALGK+LSKQ K A+AR +YE+GCQ+TQGENSYIWQCWAVLE+R
Sbjct: 191 ILEKCIAYWPEDGRPYVALGKILSKQSKLAEARILYEKGCQSTQGENSYIWQCWAVLENR 250

Query: 245 MGNIRKARELFDAATVANKKHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 304
           +GN+R+ARELFDAATVA+KKH+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 251 LGNVRRARELFDAATVADKKHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 310

Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 364
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 311 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 370

Query: 365 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 424
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 371 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 430

Query: 425 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASESAARCLQXXXXXXX 484
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +ESA+RCLQXXXXXXX
Sbjct: 431 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTESASRCLQXXXXXXX 490

Query: 485 XXXXXXXXXXXXXXXXXXXXXXYVTWMTWAALEDDQGNAIRAEEIRNLYFQQRTEVVDDA 544
           XXXXXXXXXXXXXXXXXXXXX YVTWMTWA LE+DQG+  RAEEIRNLYFQQRTEVVDDA
Sbjct: 491 XXXXXXXXXXXXXXXXXXXXXSYVTWMTWAQLEEDQGDTERAEEIRNLYFQQRTEVVDDA 550

Query: 545 SWVMGILDVIDPALDSIKRLLKLEQDP---------FAMSRVADGGARNASLDDSAASSS 604
           SWV G LD+IDPALD++KRLL   Q+            M+R  D  +++    +S+A   
Sbjct: 551 SWVTGFLDIIDPALDTVKRLLNFGQNNDNNRLTTTLRNMNRTKD--SQSNQQPESSAGRE 610

Query: 605 VADSETGFDLDAFMMKKLSVDTSKLEIQLETTRPKRF 606
             ++ +GF+LD F+  KLS+D  KL++ L++ R +RF
Sbjct: 611 DIETGSGFNLDVFLRSKLSLDPLKLDVNLDSKRLERF 644

[Close]

BLAST of Carg23735 vs. Swiss-Prot
Match: sp|Q9FNS4|MBB1_CHLRE (PsbB mRNA maturation factor Mbb1, chloroplastic OS=Chlamydomonas reinhardtii OX=3055 GN=MBB1 PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 8.0e-16
Identity = 46/115 (40.00%), Postives = 65/115 (56.52%), Query Frame = 0


Query: 132 LIINLDLALYKAK-----------MMARNFLYDEARQVLQKCIDKWPEDGRAYVALGKML 191
           L IN+DL L++ +           +  R  LY  A   L++C+   P D RAYV LGK L
Sbjct: 112 LKINIDLLLWRCRTSRIRARQTLDLNERKSLYKAAEDGLRRCLALDPADPRAYVVLGKTL 171

Query: 192 SKQMKAADARAVYERGCQATQGENSYIWQCWAVLESRMGNIRKARELFDAATVAN 236
            +Q +  +AR +Y+ GC  T   N YIW  W  LE+R GN+ +AR+L+DAA V +
Sbjct: 172 VQQKRYDEARQLYQDGCANTGNVNPYIWSAWGWLEARTGNVERARKLYDAAVVVD 226

[Close]

BLAST of Carg23735 vs. TrEMBL
Match: tr|A0A0A0L958|A0A0A0L958_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G166320 PE=4 SV=1)

HSP 1 Score: 525.4 bits (1352), Expect = 1.8e-145
Identity = 559/639 (87.48%), Postives = 587/639 (91.86%), Query Frame = 0


Query: 1   MQVFSSSPSTTSFNLFSSSQNPNNLSKYRCKNLIIPLHFAPSSLSV--CCSSRESSTAVI 60
           MQVFSS PST SFNLFSSSQNP NLSKYRCK     LH A +S SV  CCS+R+SSTA +
Sbjct: 1   MQVFSSPPSTASFNLFSSSQNPTNLSKYRCKIFSTHLHSAHNSFSVPPCCSARDSSTAFL 60

Query: 61  SSDRSLDGENREASEEVLRVRRP--EFTGEDSGDGEEAEDERSSSVIELGLAEIAKKMPI 120
            +DRS +  N E SEEV+ +RRP  EF GED    EE E E S+ +I++ L EIAKKMPI
Sbjct: 61  VADRSSERANGETSEEVITIRRPVMEFPGED----EEREVESSTPMIDVRLTEIAKKMPI 120

Query: 121 FEPENRVDSSALERPLIINLDLALYKAKMMARNFLYDEARQVLQKCIDKWPEDGRAYVAL 180
           FEPENRVDSSALERPLIINLDLALY+AKM+ARNF YDEA+QVLQKCI+KWPEDGRAYVAL
Sbjct: 121 FEPENRVDSSALERPLIINLDLALYRAKMLARNFQYDEAQQVLQKCINKWPEDGRAYVAL 180

Query: 181 GKMLSKQMKAADARAVYERGCQATQGENSYIWQCWAVLESRMGNIRKARELFDAATVANK 240
           GKML KQMKAA+A+AVYERGCQATQGENSYIWQCWAVLESRMGNIRKARELFDAATVANK
Sbjct: 181 GKMLGKQMKAAEAKAVYERGCQATQGENSYIWQCWAVLESRMGNIRKARELFDAATVANK 240

Query: 241 KHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           KHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 KHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXASESAARCLQXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXX SESAARCLQXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXDSESAARCLQXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXYVTWMTWAALEDDQGNAIRAEEIRNLYFQQRTEVVDDASWVMGILDVIDPALDSIKR 540
           XXXYVTWMTWAALE+DQGNAIRAEEIRNLYFQQRTEVVDDASWVMG LDVIDPALDSIKR
Sbjct: 481 XXXYVTWMTWAALEEDQGNAIRAEEIRNLYFQQRTEVVDDASWVMGFLDVIDPALDSIKR 540

Query: 541 LLKLEQDPFAMSRVADGGARNASLDDSAASSS---VADSETGFDLDAFMMKKLSVDTSKL 600
           LLKLEQDPF  SR ADGG RN S+DDSAASSS   V +SETGFDLDAF+MKKLS+DTSKL
Sbjct: 541 LLKLEQDPFTASRTADGGPRNTSIDDSAASSSSNNVGESETGFDLDAFIMKKLSIDTSKL 600

Query: 601 EIQLETTRPKRFKYQRSQMRSENRPEMAVSQRQRTASST 633
           EIQ+ETTRPKRFKYQR Q++SENR EMAVS+ Q T SS+
Sbjct: 601 EIQMETTRPKRFKYQRRQLKSENRQEMAVSKSQGTESSS 635

[Close]

BLAST of Carg23735 vs. TrEMBL
Match: tr|A0A1S3AY83|A0A1S3AY83_CUCME (protein high chlorophyll fluorescent 107 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483894 PE=4 SV=1)

HSP 1 Score: 518.5 bits (1334), Expect = 2.2e-143
Identity = 557/639 (87.17%), Postives = 585/639 (91.55%), Query Frame = 0


Query: 1   MQVFSSSPSTTSFNLFSSSQNPNNLSKYRCKNLIIPLHFAPSSLSV--CCSSRESSTAVI 60
           MQVFSS PST SFNLFSSSQ+  NLSKYRCK     LH A +SLS+  CCSSR+SSTAV+
Sbjct: 1   MQVFSSPPSTASFNLFSSSQSSTNLSKYRCKIFNTHLHSAHNSLSLPPCCSSRDSSTAVL 60

Query: 61  SSDRSLDGENREASEEVLRVRRP--EFTGEDSGDGEEAEDERSSSVIELGLAEIAKKMPI 120
            +DRS +G N EASEEV+ +RRP  EF  ED    EE E E S+ +I++ L EIAKKMPI
Sbjct: 61  VADRSSEGANGEASEEVITIRRPVMEFPSED----EETEVESSTPMIDVRLTEIAKKMPI 120

Query: 121 FEPENRVDSSALERPLIINLDLALYKAKMMARNFLYDEARQVLQKCIDKWPEDGRAYVAL 180
           FEPENRVDSSALERPLIINLDLALY+AKM+ARNF YDEA+QVLQKCI+KWPEDGRAYVAL
Sbjct: 121 FEPENRVDSSALERPLIINLDLALYRAKMLARNFQYDEAQQVLQKCINKWPEDGRAYVAL 180

Query: 181 GKMLSKQMKAADARAVYERGCQATQGENSYIWQCWAVLESRMGNIRKARELFDAATVANK 240
           GKML KQMKAA+A+AVYERGCQATQGENSYIWQCWAVLESRMGNIRKARELFDAATVANK
Sbjct: 181 GKMLGKQMKAAEAKAVYERGCQATQGENSYIWQCWAVLESRMGNIRKARELFDAATVANK 240

Query: 241 KHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           KHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 KHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 360

Query: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 361 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 420

Query: 421 XXXXXXXXXXXXXXXXXXXXXXXXASESAARCLQXXXXXXXXXXXXXXXXXXXXXXXXXX 480
           XXXXXXXXXXXXXXXXXXXXXXXXASESAARCLQXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 XXXXXXXXXXXXXXXXXXXXXXXXASESAARCLQXXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXYVTWMTWAALEDDQGNAIRAEEIRNLYFQQRTEVVDDASWVMGILDVIDPALDSIKR 540
           XXXYVTWMTWAALE+DQGNAIRAEEIRNLYFQQRTEVVDDASWVMG LDVIDPALD IKR
Sbjct: 481 XXXYVTWMTWAALEEDQGNAIRAEEIRNLYFQQRTEVVDDASWVMGFLDVIDPALDIIKR 540

Query: 541 LLKLEQDPFAMSRVADGGARNASLD---DSAASSSVADSETGFDLDAFMMKKLSVDTSKL 600
           LLKLEQDPFA SR ADGG RNAS+D          V +SETGFDLDAF+MKKLS+DTSKL
Sbjct: 541 LLKLEQDPFAASRTADGGPRNASMDXXXXXXXXXXVVESETGFDLDAFIMKKLSIDTSKL 600

Query: 601 EIQLETTRPKRFKYQRSQMRSENRPEMAVSQRQRTASST 633
           EIQLETTRPKRFKYQR Q++SENR EMAVS+ QRT SS+
Sbjct: 601 EIQLETTRPKRFKYQRRQLKSENRQEMAVSKSQRTESSS 635

[Close]

BLAST of Carg23735 vs. TrEMBL
Match: tr|A0A251QW12|A0A251QW12_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G117800 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 8.6e-84
Identity = 454/623 (72.87%), Postives = 514/623 (82.50%), Query Frame = 0


Query: 8   PSTTSFNLFS-SSQNPNNLSKYRCKNLIIPLHFAPSSLSV--CCSSRESSTAVI------ 67
           PS  +F +FS +SQNPNN SK+  K   +PLH +P SLS    CS R+SS  V+      
Sbjct: 10  PSNPNFTVFSCTSQNPNNHSKFAFKIPTLPLHSSPYSLSAPPRCSIRDSSVPVLDQTPLP 69

Query: 68  SSDRSLDGENR------------EASEEVLRVRRPEFTGEDSGDGEEAEDERSSSVIELG 127
           SSD S D  ++            E+S+ VL VRRP    E SGDG+    E + + ++ G
Sbjct: 70  SSDSSNDAVSKEQSQSNAVLPEAESSKRVLVVRRPAM--EVSGDGDGDGGEEAPTALDAG 129

Query: 128 LAEIAKKMPIFEPENRVDSSALERPLIINLDLALYKAKMMARNFLYDEARQVLQKCIDKW 187
           L+E+AKKMPIFEPE + +S   E+PL +NLDLALY+AK++ RN+ Y EA ++L+KCI  W
Sbjct: 130 LSELAKKMPIFEPEQKAESGVKEKPLSVNLDLALYRAKILTRNYRYAEAEKLLEKCIYYW 189

Query: 188 PEDGRAYVALGKMLSKQMKAADARAVYERGCQATQGENSYIWQCWAVLESRMGNIRKARE 247
           PEDGRAYVALGK LSKQ K A+ARAVYE+GCQATQGEN YIWQCWAVLE++MGN R+ARE
Sbjct: 190 PEDGRAYVALGKALSKQSKTAEARAVYEKGCQATQGENPYIWQCWAVLENKMGNTRRARE 249

Query: 248 LFDAATVANKKHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 307
           LFDAATVA+K+HI XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 250 LFDAATVADKRHIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 309

Query: 308 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 367
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 310 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 369

Query: 368 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 427
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 370 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 429

Query: 428 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASESAARCLQXXXXXXXXXXXXXXXX 487
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  SE+AARCL XXXXXXXXXXXXXXXX
Sbjct: 430 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTSETAARCLXXXXXXXXXXXXXXXXX 489

Query: 488 XXXXXXXXXXXXXYVTWMTWAALEDDQGNAIRAEEIRNLYFQQRTEVVDDASWVMGILDV 547
           XXXXXXXXXXXXX VTWMTWA+LE++QGN+ RAEEIR+LYFQQR E+VDDASW+MG LD+
Sbjct: 490 XXXXXXXXXXXXXXVTWMTWASLEENQGNSARAEEIRDLYFQQRIEIVDDASWIMGFLDI 549

Query: 548 IDPALDSIKRLLKLEQDPFAMS----RVADGGARNASLDDSAASSSV---ADSETGFDLD 603
           IDPALD IK LLKL+Q+   +     R   G   N   ++SA  SS     +SE+GFD+D
Sbjct: 550 IDPALDRIKSLLKLDQNSQQIQQDSLRTITGANENNIDEESAGPSSKRNDMESESGFDVD 609

[Close]

BLAST of Carg23735 vs. TrEMBL
Match: tr|A0A2I4F242|A0A2I4F242_9ROSI (protein high chlorophyll fluorescent 107 isoform X1 OS=Juglans regia OX=51240 GN=LOC108994802 PE=4 SV=1)

HSP 1 Score: 318.5 bits (815), Expect = 3.3e-83
Identity = 460/638 (72.10%), Postives = 517/638 (81.03%), Query Frame = 0


Query: 5   SSSPSTTSFNLFSSSQNPNNLSKYRCKNLIIPLHF--APSSLSV-CCSSRESSTAVISSD 64
           SS  S ++F +F +SQ+P+ LSK   K  I+PLH   +PS LSV  CSS++S   V+  D
Sbjct: 8   SSFSSNSNFTVFYTSQSPHRLSKLSFKIPILPLHHFSSPSYLSVTSCSSQDSPPPVLEKD 67

Query: 65  RSLD----------GENREASEEVLRVRRPEFTGEDSGDGEEAEDERS----SSVIELGL 124
            S+            +     ++VL VRRP    E SGDGE  E E      SS I+ GL
Sbjct: 68  SSVPTQEISTEDVVSKKESYPQKVLVVRRPVM--ESSGDGESEESEEDADLRSSAIDAGL 127

Query: 125 AEIAKKMPIFEPENRVDSSA--LERPLIINLDLALYKAKMMARNFLYDEARQVLQKCIDK 184
            E AKKMP+FEPE RV++S   LE+PL +NLDLALYKAK +AR F Y+EA+++L+KCI  
Sbjct: 128 KEFAKKMPLFEPE-RVEASGLQLEKPLAVNLDLALYKAKGLARRFRYEEAQEILEKCIYY 187

Query: 185 WPEDGRAYVALGKMLSKQMKAADARAVYERGCQATQGENSYIWQCWAVLESRMGNIRKAR 244
           WPEDGRA VALGK+LSKQ K A+ARAVYE+GCQATQGEN Y+WQCWAVLE++MGNIR+AR
Sbjct: 188 WPEDGRASVALGKILSKQSKMAEARAVYEKGCQATQGENPYLWQCWAVLENKMGNIRRAR 247

Query: 245 ELFDAATVANKKHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 304
           ELFDAATVANK+HI XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 248 ELFDAATVANKRHIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 307

Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 364
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 308 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 367

Query: 365 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 424
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 368 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 427

Query: 425 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASESAARCLQXXXXXXXXXXXXXXX 484
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    SESAARCL XXXXXXXXXXXXXXX
Sbjct: 428 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXINSTSESAARCLXXXXXXXXXXXXXXXX 487

Query: 485 XXXXXXXXXXXXXXYVTWMTWAALEDDQGNAIRAEEIRNLYFQQRTEVVDDASWVMGILD 544
           XXXXXXXXXXXXXXYVTWMTWA+LE+DQGN++RAEEIRNLYFQQRTEVVDDASWVMG LD
Sbjct: 488 XXXXXXXXXXXXXXYVTWMTWASLEEDQGNSVRAEEIRNLYFQQRTEVVDDASWVMGFLD 547

Query: 545 VIDPALDSIKRLLK-----LEQDPFAMSRVADGGARNASLDDSAASSSVA------DSET 604
           +IDPALDSIKRLLK     L+++  ++  + +    +   D    SS ++       S T
Sbjct: 548 IIDPALDSIKRLLKFGRKSLQKEKESLENITENNGNSIDEDSVGLSSGLSGGKDTESSGT 607

[Close]

BLAST of Carg23735 vs. TrEMBL
Match: tr|D7SYL4|D7SYL4_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0077g01010 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 7.3e-83
Identity = 463/643 (72.01%), Postives = 537/643 (83.51%), Query Frame = 0


Query: 5   SSSPSTTSFNLFSSSQNPNNLSKYRCKNLIIPLHFAPSSLSV-CCSSRESSTAVISS--D 64
           SS  S ++F+L+S SQNP++ SK+  K  I+PLH + S L++  C+S++SS+ ++     
Sbjct: 8   SSPSSPSNFSLYSPSQNPSS-SKFSFKVPIVPLHSSLSPLTLPPCASKDSSSPLLEQKPH 67

Query: 65  RSLDGENREASEEVLRVRRP--EFTGED--SGDGEEA-EDERSSSVIELGLAEIAKKMPI 124
            S  G   ++  EVL VRRP  E++G+D  S +G++  ED  SSS I+ GLAE AKK+P+
Sbjct: 68  SSGFGSEPQSPPEVLTVRRPMKEYSGDDDESSNGDDVDEDTFSSSPIDAGLAEFAKKLPM 127

Query: 125 FEPENRVDSSALERPLIINLDLALYKAKMMARNFLYDEARQVLQKCIDKWPEDGRAYVAL 184
           FEP+ R + S+ ERPL++NLDLALY+AK++ARN+ ++EA ++LQKCI  WPEDGR YVAL
Sbjct: 128 FEPQ-RAELSSEERPLLVNLDLALYRAKVLARNYQFEEAEKILQKCIYYWPEDGRPYVAL 187

Query: 185 GKMLSKQMKAADARAVYERGCQATQGENSYIWQCWAVLESRMGNIRKARELFDAATVANK 244
           GK+LSKQ K ++ARAVYE+GCQATQGEN YIWQCWAVLE++MGNIR+AR+LFDAATVA+K
Sbjct: 188 GKILSKQSKTSEARAVYEKGCQATQGENPYIWQCWAVLENKMGNIRRARDLFDAATVADK 247

Query: 245 KHIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 304
           +H+XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 248 RHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 307

Query: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 364
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 308 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 367

Query: 365 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 424
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 368 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 427

Query: 425 XXXXXXXXXXXXXXXXXXXXXXXXASESAARCLQXXXXXXXXXXXXXXXXXXXXXXXXXX 484
           XXXXXXXXXXXXXXXXXXXXXXXX +ESAARCLQXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 428 XXXXXXXXXXXXXXXXXXXXXXXXTTESAARCLQXXXXXXXXXXXXXXXXXXXXXXXXXX 487

Query: 485 XXXYVTWMTWAALEDDQGNAIRAEEIRNLYFQQRTEVVDDASWVMGILDVIDPALDSIKR 544
           XX Y+TWMTWA+ E++QGNA+RAEEIR+LYFQQRTEVVDDASWVMG LD+IDPALDSIKR
Sbjct: 488 XXSYITWMTWASFEENQGNAVRAEEIRDLYFQQRTEVVDDASWVMGFLDIIDPALDSIKR 547

Query: 545 LLKLEQDPF----AMSRVADGGARNASLDDSAASSSVAD-----SETGFDLDAFMMKKLS 604
           LL L+Q+ +      SR   G   ++S      SS   D     SE GF+LDAF+ +KLS
Sbjct: 548 LLNLDQNSYYRIPDSSRNIPGANEDSSGPXXXXSSGNPDSKDTASENGFNLDAFIREKLS 607

Query: 605 VDTSKLEIQL---ETTRPKRFKYQRSQMRSEN---RPEMAVSQ 625
           +D S L++Q+   ETT P+R K  R   R EN   R   AV+Q
Sbjct: 608 LDPSNLDVQMQTHETTVPRRVKLPRRIKRLENTQSRTTTAVTQ 648

The following BLAST results are available for this feature:

BLAST of Carg23735 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023540782.1	2.0e-185	98.58	protein high chlorophyll fluorescent 107 [Cucurbita pepo subsp. pepo]	[more]
XP_022972184.1	2.9e-184	97.79	protein high chlorophyll fluorescent 107-like isoform X1 [Cucurbita maxima] >XP_...	[more]
XP_022938340.1	7.7e-177	96.06	protein high chlorophyll fluorescent 107 [Cucurbita moschata]	[more]
XP_004134505.1	2.7e-145	87.48	PREDICTED: psbB mRNA maturation factor Mbb1, chloroplastic isoform X1 [Cucumis s...	[more]
XP_008438954.1	3.3e-143	87.17	PREDICTED: protein high chlorophyll fluorescent 107 isoform X1 [Cucumis melo] >X...	[more]

BLAST of Carg23735 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G17040.1	3.3e-65	67.66	high chlorophyll fluorescent 107	[more]

BLAST of Carg23735 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8RWG2\|CF107_ARATH	6.0e-64	67.66	Protein high chlorophyll fluorescent 107 OS=Arabidopsis thaliana OX=3702 GN=HCF1...	[more]
sp\|Q9FNS4\|MBB1_CHLRE	8.0e-16	40.00	PsbB mRNA maturation factor Mbb1, chloroplastic OS=Chlamydomonas reinhardtii OX=...	[more]

BLAST of Carg23735 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L958\|A0A0A0L958_CUCSA	1.8e-145	87.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G166320 PE=4 SV=1	[more]
tr\|A0A1S3AY83\|A0A1S3AY83_CUCME	2.2e-143	87.17	protein high chlorophyll fluorescent 107 isoform X1 OS=Cucumis melo OX=3656 GN=L...	[more]
tr\|A0A251QW12\|A0A251QW12_PRUPE	8.6e-84	72.87	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G117800 PE=4 SV=1	[more]
tr\|A0A2I4F242\|A0A2I4F242_9ROSI	3.3e-83	72.10	protein high chlorophyll fluorescent 107 isoform X1 OS=Juglans regia OX=51240 GN...	[more]
tr\|D7SYL4\|D7SYL4_VITVI	7.3e-83	72.01	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0077g01010 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006396	RNA processing

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR013026	TPR-contain_dom
IPR011990	TPR-like_helical_dom_sf
IPR003107	HAT
IPR019734	TPR_repeat

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23735-RA	Carg23735-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019734	Tetratricopeptide repeat	SMART	SM00028	tpr_5	coord: 409..442 e-value: 68.0 score: 7.6 coord: 239..272 e-value: 25.0 score: 11.5 coord: 205..238 e-value: 42.0 score: 9.4 coord: 446..479 e-value: 37.0 score: 10.0 coord: 170..203 e-value: 250.0 score: 2.7 coord: 375..408 e-value: 13.0 score: 14.0 coord: 307..340 e-value: 28.0 score: 11.1 coord: 273..306 e-value: 13.0 score: 14.1
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 409..442 score: 6.785
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 375..408 score: 7.67
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 273..306 score: 8.437
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 446..479 score: 5.93
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 307..340 score: 6.933
IPR003107	HAT (Half-A-TPR) repeat	SMART	SM00386	hat_new_1	coord: 253..285 e-value: 19.0 score: 13.4 coord: 219..251 e-value: 16.0 score: 13.8 coord: 355..387 e-value: 990.0 score: 0.8 coord: 321..353 e-value: 66.0 score: 9.4 coord: 184..217 e-value: 72.0 score: 9.1 coord: 389..421 e-value: 34.0 score: 11.5 coord: 423..458 e-value: 64.0 score: 9.5 coord: 150..182 e-value: 90.0 score: 8.4 coord: 460..492 e-value: 16.0 score: 14.0 coord: 287..319 e-value: 1.3 score: 18.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 299..546 e-value: 1.1E-28 score: 102.3
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	G3DSA:1.25.40.10		coord: 132..298 e-value: 3.7E-27 score: 97.3
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	SSF48452	TPR-like	coord: 151..385
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	SSF48452	TPR-like	coord: 371..497
None	No IPR available	PFAM	PF13432	TPR_16	coord: 152..196 e-value: 0.0036 score: 17.8 coord: 279..340 e-value: 8.1E-4 score: 19.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 614..632
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 604..632
None	No IPR available	PANTHER	PTHR44917	FAMILY NOT NAMED	coord: 6..617
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 136..479 score: 34.76

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23735	Cla021795	Watermelon (97103) v1	carwmB0953
Carg23735	Csa3G166320	Cucumber (Chinese Long) v2	carcuB0967
Carg23735	MELO3C006715	Melon (DHL92) v3.5.1	carmeB0934
Carg23735	ClCG05G006560	Watermelon (Charleston Gray)	carwcgB0929
Carg23735	CSPI03G14980	Wild cucumber (PI 183967)	carcpiB0989
Carg23735	Cucsa.252540	Cucumber (Gy14) v1	carcgyB1072
Carg23735	CmaCh06G015620	Cucurbita maxima (Rimu)	carcmaB1307
Carg23735	CmoCh06G015590	Cucurbita moschata (Rifu)	carcmoB1276
Carg23735	Lsi05G015950	Bottle gourd (USVL1VR-Ls)	carlsiB869
Carg23735	Cp4.1LG08g05370	Cucurbita pepo (Zucchini)	carcpeB1321
Carg23735	CsGy3G015090	Cucumber (Gy14) v2	carcgybB0939
Carg23735	MELO3C006715.2	Melon (DHL92) v3.6.1	carmedB0940
Carg23735	CsaV3_3G015170	Cucumber (Chinese Long) v3	carcucB0995
Carg23735	Cla97C05G088160	Watermelon (97103) v2	carwmbB1003
Carg23735	Bhi01G000780	Wax gourd	carwgoB1105

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23735	Silver-seed gourd	carcarB318
Carg23735	Cucurbita maxima (Rimu)	carcmaB1304
Carg23735	Cucurbita maxima (Rimu)	carcmaB1305
Carg23735	Cucurbita moschata (Rifu)	carcmoB1273
Carg23735	Cucurbita pepo (Zucchini)	carcpeB1320