Carg23729 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23729
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Nudix hydrolase mitochondrial-like
Location	Cucurbita_argyrosperma_scaffold_213 : 184654 .. 185526 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTGCTTGGTTTCTCGTACCGGAAGGGAGCTGCAAAGATACAATCATATGGGGTTTCGCCAAGTTGTCGGGTGGGTTTAATTTGTTTCTTAATTCCCACCATTCATTTGTTCCTCTTTGTTCTTTCCCTGGAATTTCATTCATTAACATTGAAAAATGATGGATTCTTGCAGTTGTATACCCTATAGATTCAAATTCAGCGAAGATGGGGTGAAAATTCGTGATGCATATGAGGTGCTTGTGATAAGTTCTCAAAAGGGTCAAGGCCTGATGTTTCCCAAGGTACTTCCAAATAAACAATTTCTTGTTTTCCTCAATTGGGCTCTTGTTCTTAATCAATTTTGTTCCCCATTTCAGGGTGGTTGGGAACTCGATGAATCCTTGGAACAAGCTGCTTGTAGAGAATCACTTGAAGAAGCTGGTGTTGTTGGGAAAGTTGAGGTAGGTTCTGTTTTGGGAATCCCCTTGTAAGTAATCCCTGTTTTGGAACAACATCAATGAGTGCTGATTCTTTGTTATGTTACATACAGTCTGAACTTGGAAAATGGAGATTCATCAGCAAAAGCCAAGGCACATACTATGAAGGCTATATGTTCCCTTTGTTTGTTGAGGAGCAACTTGAGCTGTGGCCAGAGAAACATGTTAGACAAAGAATATGGGTATGTTCTTGATTCTTAAACAAAACAGTCCACTGATTTACATACCAAAACAGTATATTGAGTTTTTTTTTTTTTTTTTTTTTTTTGTGGTCAGATGGGTGTAGGTGAAGCTAGAGAAGTGTGTAGACATTGGTGGATGAAGGAAGCTTTAGATATCTTAGTTGAAAGACTAACATCCATGGGAGAGCAAAAGGATGGTGATGATCTGTGA

mRNA sequence

ATGGCTTGCTTGGTTTCTCGTACCGGAAGGGAGCTGCAAAGATACAATCATATGGGGTTTCGCCAAGTTGTCGGTTGTATACCCTATAGATTCAAATTCAGCGAAGATGGGGTGAAAATTCGTGATGCATATGAGGTGCTTGTGATAAGTTCTCAAAAGGGTCAAGGCCTGATGTTTCCCAAGGGTGGTTGGGAACTCGATGAATCCTTGGAACAAGCTGCTTGTAGAGAATCACTTGAAGAAGCTGGTGTTGTTGGGAAAGTTGAGTCTGAACTTGGAAAATGGAGATTCATCAGCAAAAGCCAAGGCACATACTATGAAGGCTATATGTTCCCTTTGTTTGTTGAGGAGCAACTTGAGCTGTGGCCAGAGAAACATGTTAGACAAAGAATATGGATGGGTGTAGGTGAAGCTAGAGAAGTGTGTAGACATTGGTGGATGAAGGAAGCTTTAGATATCTTAGTTGAAAGACTAACATCCATGGGAGAGCAAAAGGATGGTGATGATCTGTGA

Coding sequence (CDS)

ATGGCTTGCTTGGTTTCTCGTACCGGAAGGGAGCTGCAAAGATACAATCATATGGGGTTTCGCCAAGTTGTCGGTTGTATACCCTATAGATTCAAATTCAGCGAAGATGGGGTGAAAATTCGTGATGCATATGAGGTGCTTGTGATAAGTTCTCAAAAGGGTCAAGGCCTGATGTTTCCCAAGGGTGGTTGGGAACTCGATGAATCCTTGGAACAAGCTGCTTGTAGAGAATCACTTGAAGAAGCTGGTGTTGTTGGGAAAGTTGAGTCTGAACTTGGAAAATGGAGATTCATCAGCAAAAGCCAAGGCACATACTATGAAGGCTATATGTTCCCTTTGTTTGTTGAGGAGCAACTTGAGCTGTGGCCAGAGAAACATGTTAGACAAAGAATATGGATGGGTGTAGGTGAAGCTAGAGAAGTGTGTAGACATTGGTGGATGAAGGAAGCTTTAGATATCTTAGTTGAAAGACTAACATCCATGGGAGAGCAAAAGGATGGTGATGATCTGTGA

Protein sequence

MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFPKGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLELWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKDGDDL

Homology

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BLAST of Carg23729 vs. NCBI nr
Match: XP_023550921.1 (nudix hydrolase 17, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 358.2 bits (918), Expect = 1.5e-95
Identity = 170/170 (100.00%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60
           MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP
Sbjct: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60

Query: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120
           KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE
Sbjct: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120

Query: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKDGDDL 171
           LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKDGDDL
Sbjct: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKDGDDL 170

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BLAST of Carg23729 vs. NCBI nr
Match: XP_022939350.1 (nudix hydrolase 17, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 356.3 bits (913), Expect = 5.8e-95
Identity = 169/170 (99.41%), Postives = 170/170 (100.00%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60
           MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP
Sbjct: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60

Query: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120
           KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE
Sbjct: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120

Query: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKDGDDL 171
           LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQK+GDDL
Sbjct: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKNGDDL 170

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BLAST of Carg23729 vs. NCBI nr
Match: XP_022973557.1 (nudix hydrolase 17, mitochondrial-like [Cucurbita maxima])

HSP 1 Score: 350.5 bits (898), Expect = 3.2e-93
Identity = 169/171 (98.83%), Postives = 169/171 (98.83%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60
           MACLVSRTGRELQRYNHMGFRQVVGCIPYRFK SEDGVKIRDAYEVLVISSQKGQGLMFP
Sbjct: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKCSEDGVKIRDAYEVLVISSQKGQGLMFP 60

Query: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120
           KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE
Sbjct: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120

Query: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERL-TSMGEQKDGDDL 171
           LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERL TSMGEQKDGDDL
Sbjct: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLATSMGEQKDGDDL 171

[Close]

BLAST of Carg23729 vs. NCBI nr
Match: XP_023540937.1 (nudix hydrolase 17, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 328.9 bits (842), Expect = 9.9e-87
Identity = 154/168 (91.67%), Postives = 163/168 (97.02%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60
           MACLVSRTGRELQRYNHMGFRQVVGCIPYRFK+SEDG+KI + YEVLVISSQKGQGLMFP
Sbjct: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKYSEDGMKIDNEYEVLVISSQKGQGLMFP 60

Query: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120
           KGGWELDESLEQAA RESLEEAGV+G+VES+LGKWRFISKSQGTYYEGYMFPLFVEEQL+
Sbjct: 61  KGGWELDESLEQAASRESLEEAGVLGQVESQLGKWRFISKSQGTYYEGYMFPLFVEEQLD 120

Query: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKDGD 169
           LWPEKHVR+RIWM VGEAREVCRHWWMKEALDILVERLTSMGEQK+ D
Sbjct: 121 LWPEKHVRERIWMSVGEAREVCRHWWMKEALDILVERLTSMGEQKEDD 168

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BLAST of Carg23729 vs. NCBI nr
Match: XP_022952894.1 (nudix hydrolase 17, mitochondrial-like [Cucurbita moschata])

HSP 1 Score: 327.8 bits (839), Expect = 2.2e-86
Identity = 153/168 (91.07%), Postives = 163/168 (97.02%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60
           MACLVSRTGRELQRYNHMGFRQVVGCIPYRFK++EDG+KI + YEVLVISSQKGQGLMFP
Sbjct: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKYNEDGMKIDNEYEVLVISSQKGQGLMFP 60

Query: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120
           KGGWELDESLEQAA RESLEEAGV+G+VES+LGKWRFISKSQGTYYEGYMFPLFVEEQL+
Sbjct: 61  KGGWELDESLEQAASRESLEEAGVLGQVESQLGKWRFISKSQGTYYEGYMFPLFVEEQLD 120

Query: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKDGD 169
           LWPEKHVR+RIWM VGEAREVCRHWWMKEALDILVERLTSMGEQK+ D
Sbjct: 121 LWPEKHVRERIWMSVGEAREVCRHWWMKEALDILVERLTSMGEQKEDD 168

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BLAST of Carg23729 vs. TAIR10
Match: AT2G01670.1 (nudix hydrolase homolog 17)

HSP 1 Score: 255.0 bits (650), Expect = 3.3e-68
Identity = 124/167 (74.25%), Postives = 138/167 (82.63%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60
           M CL SRTGR+ QRYN  G RQVVGC+PYRFK S DG KI D  EVLVISSQKG  LMFP
Sbjct: 6   MVCLASRTGRQFQRYN-KGRRQVVGCVPYRFKLSNDG-KISDEVEVLVISSQKGHALMFP 65

Query: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120
           KGGWELDES+E+AA RE LEEAGV+G VE +LGKW F+SKS+GTYYEG MFP+ V EQLE
Sbjct: 66  KGGWELDESVEEAASRECLEEAGVLGNVEHQLGKWDFLSKSRGTYYEGLMFPMLVTEQLE 125

Query: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTS-MGEQKD 167
           LWPE+HVRQRIWM V EARE CR WWMKEALD+LVERL+S M + K+
Sbjct: 126 LWPEQHVRQRIWMNVTEAREACRDWWMKEALDVLVERLSSPMNQPKE 170

[Close]

BLAST of Carg23729 vs. TAIR10
Match: AT1G14860.1 (nudix hydrolase homolog 18)

HSP 1 Score: 250.0 bits (637), Expect = 1.1e-66
Identity = 118/159 (74.21%), Postives = 136/159 (85.53%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60
           M CLVSRTGR+ QRYN  G RQVVGCIPYR K S DG  I D +EVLVISSQKG  LMFP
Sbjct: 1   MVCLVSRTGRQSQRYN-KGRRQVVGCIPYRLKISSDGT-ISDEFEVLVISSQKGHALMFP 60

Query: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120
           KGGWELDES+E+AA RESLEEAGVVG VE +LGKW F+SKS+GT+YEG+MFP+ V+E+LE
Sbjct: 61  KGGWELDESVEEAASRESLEEAGVVGNVERQLGKWDFLSKSKGTFYEGFMFPMLVKEELE 120

Query: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLT 160
           LWPE+H+RQRIWM V EAR+ CR WWMKEALD+LV+RL+
Sbjct: 121 LWPEQHLRQRIWMKVDEARDACRDWWMKEALDVLVQRLS 157

[Close]

BLAST of Carg23729 vs. TAIR10
Match: AT1G18300.1 (nudix hydrolase homolog 4)

HSP 1 Score: 200.3 bits (508), Expect = 9.6e-52
Identity = 86/165 (52.12%), Postives = 122/165 (73.94%), Query Frame = 0


Query: 4   LVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFPKGG 63
           LVSRTGR+LQRY+H G+RQVVGC+PYR+K  E         +VL++S+QKG+G++FPKGG
Sbjct: 43  LVSRTGRDLQRYDHAGYRQVVGCVPYRYKKQEVNGVETQVIQVLLVSAQKGKGMLFPKGG 102

Query: 64  WELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLELWP 123
           WE DES+E+AA RE++EEAGV G++E +LGKW++ SK     ++GYMF L V ++ E WP
Sbjct: 103 WETDESMEEAALRETIEEAGVTGELEEKLGKWQYKSKRHSIIHDGYMFALLVSQEFERWP 162

Query: 124 EKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKDGD 169
           E  +RQR W+ + EAREVC++WWM+EAL+  +       + + G+
Sbjct: 163 EAEMRQRRWVSLDEAREVCQNWWMREALEAFINLKCLADDDESGN 207

[Close]

BLAST of Carg23729 vs. TAIR10
Match: AT1G73540.1 (nudix hydrolase homolog 21)

HSP 1 Score: 185.3 bits (469), Expect = 3.2e-47
Identity = 85/155 (54.84%), Postives = 116/155 (74.84%), Query Frame = 0


Query: 4   LVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQ-KGQGLMFPKG 63
           LVSRTGR+LQRYN  G+RQVVGC+PYR+K    G       EVL+IS+Q KG+G++ PKG
Sbjct: 44  LVSRTGRDLQRYNTAGYRQVVGCVPYRYKKHGGG-----EIEVLLISAQKKGKGMLLPKG 103

Query: 64  GWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLELW 123
           GWE+DES+E+AA RE++EEAGV G++E  LGKW++ SK     ++G+MFPL V +Q E+W
Sbjct: 104 GWEIDESIEEAALRETIEEAGVTGQLEESLGKWQYKSKRHTMIHDGHMFPLLVSQQFEIW 163

Query: 124 PEKHVRQRIWMGVGEAREVCRHWWMKEALDILVER 158
           PE   RQR W+ + EA E+C++ WM+EAL+  + R
Sbjct: 164 PESEFRQRKWVSLSEAIELCQNSWMREALEAFINR 193

[Close]

BLAST of Carg23729 vs. TAIR10
Match: AT3G26690.1 (nudix hydrolase homolog 13)

HSP 1 Score: 141.7 bits (356), Expect = 4.1e-34
Identity = 80/179 (44.69%), Postives = 110/179 (61.45%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSED----GVKIRDAYEVLVISSQKGQG 60
           M+ L +RTGR+ QRY++  FR V GCIPYR    E+     V   +  +VL+ISS     
Sbjct: 1   MSNLSARTGRDHQRYDN-NFRLVSGCIPYRLVKDEEEDSTSVDFENKLQVLMISSPNRHD 60

Query: 61  LMFPKGGWELDESLEQAACRESLEEAGVVGKV-ESELGKWRFISKSQ--------GTYYE 120
           L+FPKGGWE DE++ +AA RE++EEAGV G + E  LG W F SKS         G   +
Sbjct: 61  LVFPKGGWEDDETVLEAASREAMEEAGVKGILREDPLGVWEFRSKSSSVEADCCLGGGCK 120

Query: 121 GYMFPLFVEEQLELWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKD 167
           GYMF L V+E+L +WPE+  R+R W+ V EA E+CR+ WM+ AL+  +  +   G  K+
Sbjct: 121 GYMFALEVKEELAIWPEQDDRERRWLNVKEALELCRYEWMQSALEEFLRVMAEEGSTKE 178

[Close]

BLAST of Carg23729 vs. Swiss-Prot
Match: sp|Q9ZU95|NUD17_ARATH (Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT17 PE=2 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 5.9e-67
Identity = 124/167 (74.25%), Postives = 138/167 (82.63%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60
           M CL SRTGR+ QRYN  G RQVVGC+PYRFK S DG KI D  EVLVISSQKG  LMFP
Sbjct: 6   MVCLASRTGRQFQRYN-KGRRQVVGCVPYRFKLSNDG-KISDEVEVLVISSQKGHALMFP 65

Query: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120
           KGGWELDES+E+AA RE LEEAGV+G VE +LGKW F+SKS+GTYYEG MFP+ V EQLE
Sbjct: 66  KGGWELDESVEEAASRECLEEAGVLGNVEHQLGKWDFLSKSRGTYYEGLMFPMLVTEQLE 125

Query: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTS-MGEQKD 167
           LWPE+HVRQRIWM V EARE CR WWMKEALD+LVERL+S M + K+
Sbjct: 126 LWPEQHVRQRIWMNVTEAREACRDWWMKEALDVLVERLSSPMNQPKE 170

[Close]

BLAST of Carg23729 vs. Swiss-Prot
Match: sp|Q9LQU5|NUD18_ARATH (Nudix hydrolase 18, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT18 PE=2 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 1.9e-65
Identity = 118/159 (74.21%), Postives = 136/159 (85.53%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60
           M CLVSRTGR+ QRYN  G RQVVGCIPYR K S DG  I D +EVLVISSQKG  LMFP
Sbjct: 1   MVCLVSRTGRQSQRYN-KGRRQVVGCIPYRLKISSDGT-ISDEFEVLVISSQKGHALMFP 60

Query: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120
           KGGWELDES+E+AA RESLEEAGVVG VE +LGKW F+SKS+GT+YEG+MFP+ V+E+LE
Sbjct: 61  KGGWELDESVEEAASRESLEEAGVVGNVERQLGKWDFLSKSKGTFYEGFMFPMLVKEELE 120

Query: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLT 160
           LWPE+H+RQRIWM V EAR+ CR WWMKEALD+LV+RL+
Sbjct: 121 LWPEQHLRQRIWMKVDEARDACRDWWMKEALDVLVQRLS 157

[Close]

BLAST of Carg23729 vs. Swiss-Prot
Match: sp|Q9LE73|NUDT4_ARATH (Nudix hydrolase 4 OS=Arabidopsis thaliana OX=3702 GN=NUDT4 PE=1 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 1.7e-50
Identity = 86/165 (52.12%), Postives = 122/165 (73.94%), Query Frame = 0


Query: 4   LVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFPKGG 63
           LVSRTGR+LQRY+H G+RQVVGC+PYR+K  E         +VL++S+QKG+G++FPKGG
Sbjct: 43  LVSRTGRDLQRYDHAGYRQVVGCVPYRYKKQEVNGVETQVIQVLLVSAQKGKGMLFPKGG 102

Query: 64  WELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLELWP 123
           WE DES+E+AA RE++EEAGV G++E +LGKW++ SK     ++GYMF L V ++ E WP
Sbjct: 103 WETDESMEEAALRETIEEAGVTGELEEKLGKWQYKSKRHSIIHDGYMFALLVSQEFERWP 162

Query: 124 EKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKDGD 169
           E  +RQR W+ + EAREVC++WWM+EAL+  +       + + G+
Sbjct: 163 EAEMRQRRWVSLDEAREVCQNWWMREALEAFINLKCLADDDESGN 207

[Close]

BLAST of Carg23729 vs. Swiss-Prot
Match: sp|Q8VY81|NUD21_ARATH (Nudix hydrolase 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT21 PE=2 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 5.8e-46
Identity = 85/155 (54.84%), Postives = 116/155 (74.84%), Query Frame = 0


Query: 4   LVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQ-KGQGLMFPKG 63
           LVSRTGR+LQRYN  G+RQVVGC+PYR+K    G       EVL+IS+Q KG+G++ PKG
Sbjct: 44  LVSRTGRDLQRYNTAGYRQVVGCVPYRYKKHGGG-----EIEVLLISAQKKGKGMLLPKG 103

Query: 64  GWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLELW 123
           GWE+DES+E+AA RE++EEAGV G++E  LGKW++ SK     ++G+MFPL V +Q E+W
Sbjct: 104 GWEIDESIEEAALRETIEEAGVTGQLEESLGKWQYKSKRHTMIHDGHMFPLLVSQQFEIW 163

Query: 124 PEKHVRQRIWMGVGEAREVCRHWWMKEALDILVER 158
           PE   RQR W+ + EA E+C++ WM+EAL+  + R
Sbjct: 164 PESEFRQRKWVSLSEAIELCQNSWMREALEAFINR 193

[Close]

BLAST of Carg23729 vs. Swiss-Prot
Match: sp|Q52K88|NUD13_ARATH (Nudix hydrolase 13, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT13 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 7.3e-33
Identity = 80/179 (44.69%), Postives = 110/179 (61.45%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSED----GVKIRDAYEVLVISSQKGQG 60
           M+ L +RTGR+ QRY++  FR V GCIPYR    E+     V   +  +VL+ISS     
Sbjct: 1   MSNLSARTGRDHQRYDN-NFRLVSGCIPYRLVKDEEEDSTSVDFENKLQVLMISSPNRHD 60

Query: 61  LMFPKGGWELDESLEQAACRESLEEAGVVGKV-ESELGKWRFISKSQ--------GTYYE 120
           L+FPKGGWE DE++ +AA RE++EEAGV G + E  LG W F SKS         G   +
Sbjct: 61  LVFPKGGWEDDETVLEAASREAMEEAGVKGILREDPLGVWEFRSKSSSVEADCCLGGGCK 120

Query: 121 GYMFPLFVEEQLELWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKD 167
           GYMF L V+E+L +WPE+  R+R W+ V EA E+CR+ WM+ AL+  +  +   G  K+
Sbjct: 121 GYMFALEVKEELAIWPEQDDRERRWLNVKEALELCRYEWMQSALEEFLRVMAEEGSTKE 178

[Close]

BLAST of Carg23729 vs. TrEMBL
Match: tr|A0A0A0KRD4|A0A0A0KRD4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G547610 PE=4 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 2.0e-83
Identity = 150/168 (89.29%), Postives = 160/168 (95.24%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60
           MACLVSRTGRELQRYNHMGFRQVVGCIPYRFK++EDG+KI + YEVLVISSQKGQGLMFP
Sbjct: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKYNEDGMKISNEYEVLVISSQKGQGLMFP 60

Query: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120
           KGGWELDESLEQAA RESLEEAGV+GKVES+LGKWRFISKSQGTYYEGYMFPLFVEEQL+
Sbjct: 61  KGGWELDESLEQAASRESLEEAGVLGKVESQLGKWRFISKSQGTYYEGYMFPLFVEEQLD 120

Query: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKDGD 169
           LWPEKHVR+RIWM V EAREVCRHWWMKEALDILV+RLT +GEQ D D
Sbjct: 121 LWPEKHVRERIWMPVAEAREVCRHWWMKEALDILVKRLT-IGEQNDND 167

[Close]

BLAST of Carg23729 vs. TrEMBL
Match: tr|A0A1S3CU12|A0A1S3CU12_CUCME (nudix hydrolase 18, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103504536 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 3.4e-83
Identity = 150/168 (89.29%), Postives = 160/168 (95.24%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60
           MACLVSRTGRELQRYNHMGFRQVVGCIPYRFK++EDG+KI + YEVLVISSQKGQGLMFP
Sbjct: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKYNEDGMKICNEYEVLVISSQKGQGLMFP 60

Query: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120
           KGGWELDESLEQAA RESLEEAGV+GKVES+LGKWRFISKSQGTYYEGYMFPLFVEEQL+
Sbjct: 61  KGGWELDESLEQAASRESLEEAGVLGKVESQLGKWRFISKSQGTYYEGYMFPLFVEEQLD 120

Query: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKDGD 169
           LWPEKHVR+RIWM V EAREVCRHWWMKEALDILV+RLT +GEQ D D
Sbjct: 121 LWPEKHVRERIWMPVAEAREVCRHWWMKEALDILVKRLT-IGEQNDND 167

[Close]

BLAST of Carg23729 vs. TrEMBL
Match: tr|W9S5E7|W9S5E7_9ROSA (Nudix hydrolase 17 OS=Morus notabilis OX=981085 GN=L484_004439 PE=4 SV=1)

HSP 1 Score: 269.6 bits (688), Expect = 4.7e-69
Identity = 128/170 (75.29%), Postives = 145/170 (85.29%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60
           M C+VSRTGRELQRYNHMG RQVVGCIPYR+K   DG    +  EVLVISSQKGQGLMFP
Sbjct: 1   MTCVVSRTGRELQRYNHMGRRQVVGCIPYRYKNGNDGAMCNE-LEVLVISSQKGQGLMFP 60

Query: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120
           KGGWELDES+E+AA RESLEEAGV+G VE +LG W FISKS+GTYYEGYMFPL V+EQL+
Sbjct: 61  KGGWELDESVEEAASRESLEEAGVLGNVECQLGNWSFISKSRGTYYEGYMFPLLVKEQLD 120

Query: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKDGDDL 171
           LWPEK+VR+RIWM   EAREVC+HWWMKEALDILVERL+S  +Q   D++
Sbjct: 121 LWPEKNVRRRIWMTAAEAREVCQHWWMKEALDILVERLSSPKKQHKEDEV 169

[Close]

BLAST of Carg23729 vs. TrEMBL
Match: tr|A0A1S3UHK9|A0A1S3UHK9_VIGRR (nudix hydrolase 17, mitochondrial OS=Vigna radiata var. radiata OX=3916 GN=LOC106765415 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 6.1e-69
Identity = 126/168 (75.00%), Postives = 144/168 (85.71%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60
           MACLVSR+GRELQRYN+MG RQVVGCIPYR+K   DG  + D  EVLV+SSQKGQGLMFP
Sbjct: 1   MACLVSRSGRELQRYNNMGGRQVVGCIPYRYKEDVDG-NMSDELEVLVVSSQKGQGLMFP 60

Query: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120
           KGGWELDES+E+AACRESLEEAGV+G +E ELG+W FISK  G YYEG+MFP+FV+EQL+
Sbjct: 61  KGGWELDESVEEAACRESLEEAGVLGIIEHELGQWYFISKRHGIYYEGHMFPMFVKEQLD 120

Query: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKDGD 169
            WPEKH+R+RIWM VGEAREVC+HWWMKEALDILVER+    EQ   D
Sbjct: 121 TWPEKHLRRRIWMSVGEAREVCQHWWMKEALDILVERIMVSSEQGKRD 167

[Close]

BLAST of Carg23729 vs. TrEMBL
Match: tr|V7CU33|V7CU33_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G320500g PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 8.0e-69
Identity = 122/166 (73.49%), Postives = 146/166 (87.95%), Query Frame = 0


Query: 1   MACLVSRTGRELQRYNHMGFRQVVGCIPYRFKFSEDGVKIRDAYEVLVISSQKGQGLMFP 60
           MACLVSR+GRELQRYN+MG RQVVGCIPYR+K   DG  + +  EVLV+SSQKGQGLMFP
Sbjct: 1   MACLVSRSGRELQRYNNMGGRQVVGCIPYRYKEDVDG-NMSEELEVLVVSSQKGQGLMFP 60

Query: 61  KGGWELDESLEQAACRESLEEAGVVGKVESELGKWRFISKSQGTYYEGYMFPLFVEEQLE 120
           KGGWELDES+E+AACRESLEEAGV+G +E ELG+W FISK  G YYEG+MFP+FV+EQL+
Sbjct: 61  KGGWELDESVEEAACRESLEEAGVLGSIEHELGQWNFISKRYGVYYEGHMFPMFVKEQLD 120

Query: 121 LWPEKHVRQRIWMGVGEAREVCRHWWMKEALDILVERLTSMGEQKD 167
            WPE+++R+RIWM VGEAREVC+HWWMKEALDILV+R+ S  ++KD
Sbjct: 121 TWPEQNLRRRIWMSVGEAREVCQHWWMKEALDILVQRMVSSAQEKD 165

The following BLAST results are available for this feature:

BLAST of Carg23729 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023550921.1	1.5e-95	100.00	nudix hydrolase 17, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022939350.1	5.8e-95	99.41	nudix hydrolase 17, mitochondrial-like [Cucurbita moschata]	[more]
XP_022973557.1	3.2e-93	98.83	nudix hydrolase 17, mitochondrial-like [Cucurbita maxima]	[more]
XP_023540937.1	9.9e-87	91.67	nudix hydrolase 17, mitochondrial-like [Cucurbita pepo subsp. pepo]	[more]
XP_022952894.1	2.2e-86	91.07	nudix hydrolase 17, mitochondrial-like [Cucurbita moschata]	[more]

BLAST of Carg23729 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G01670.1	3.3e-68	74.25	nudix hydrolase homolog 17	[more]
AT1G14860.1	1.1e-66	74.21	nudix hydrolase homolog 18	[more]
AT1G18300.1	9.6e-52	52.12	nudix hydrolase homolog 4	[more]
AT1G73540.1	3.2e-47	54.84	nudix hydrolase homolog 21	[more]
AT3G26690.1	4.1e-34	44.69	nudix hydrolase homolog 13	[more]

BLAST of Carg23729 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ZU95\|NUD17_ARATH	5.9e-67	74.25	Nudix hydrolase 17, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT17 PE=2...	[more]
sp\|Q9LQU5\|NUD18_ARATH	1.9e-65	74.21	Nudix hydrolase 18, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT18 PE=2...	[more]
sp\|Q9LE73\|NUDT4_ARATH	1.7e-50	52.12	Nudix hydrolase 4 OS=Arabidopsis thaliana OX=3702 GN=NUDT4 PE=1 SV=1	[more]
sp\|Q8VY81\|NUD21_ARATH	5.8e-46	54.84	Nudix hydrolase 21, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=NUDT21 PE=2...	[more]
sp\|Q52K88\|NUD13_ARATH	7.3e-33	44.69	Nudix hydrolase 13, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NUDT13 PE=1...	[more]

BLAST of Carg23729 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KRD4\|A0A0A0KRD4_CUCSA	2.0e-83	89.29	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G547610 PE=4 SV=1	[more]
tr\|A0A1S3CU12\|A0A1S3CU12_CUCME	3.4e-83	89.29	nudix hydrolase 18, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103504536 PE=4 S...	[more]
tr\|W9S5E7\|W9S5E7_9ROSA	4.7e-69	75.29	Nudix hydrolase 17 OS=Morus notabilis OX=981085 GN=L484_004439 PE=4 SV=1	[more]
tr\|A0A1S3UHK9\|A0A1S3UHK9_VIGRR	6.1e-69	75.00	nudix hydrolase 17, mitochondrial OS=Vigna radiata var. radiata OX=3916 GN=LOC10...	[more]
tr\|V7CU33\|V7CU33_PHAVU	8.0e-69	73.49	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G320500g PE=4 ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016787	hydrolase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR015797	NUDIX_hydrolase-like_dom_sf
IPR020084	NUDIX_hydrolase_CS
IPR000086	NUDIX_hydrolase_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016787	hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23729-RA	Carg23729-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.90.79.10		coord: 12..156 e-value: 2.6E-27 score: 97.3
None	No IPR available	PANTHER	PTHR12629	DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE	coord: 1..165
None	No IPR available	PANTHER	PTHR12629:SF36	NUDIX HYDROLASE 17, MITOCHONDRIAL-RELATED	coord: 1..165
None	No IPR available	CDD	cd04666	Nudix_Hydrolase_9	coord: 22..148 e-value: 1.5958E-44 score: 144.295
IPR000086	NUDIX hydrolase domain	PFAM	PF00293	NUDIX	coord: 41..141 e-value: 7.4E-10 score: 38.9
IPR000086	NUDIX hydrolase domain	PROSITE	PS51462	NUDIX	coord: 19..155 score: 13.505
IPR020084	NUDIX hydrolase, conserved site	PROSITE	PS00893	NUDIX_BOX	coord: 62..83
IPR015797	NUDIX hydrolase-like domain superfamily	SUPERFAMILY	SSF55811	Nudix	coord: 12..158

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23729	Cla003952	Watermelon (97103) v1	carwmB0954
Carg23729	Csa5G547610	Cucumber (Chinese Long) v2	carcuB0968
Carg23729	MELO3C005275	Melon (DHL92) v3.5.1	carmeB0933
Carg23729	ClCG01G006520	Watermelon (Charleston Gray)	carwcgB0928
Carg23729	Cucsa.012180	Cucumber (Gy14) v1	carcgyB1071
Carg23729	CmaCh04G021080	Cucurbita maxima (Rimu)	carcmaB1306
Carg23729	CmaCh15G009780	Cucurbita maxima (Rimu)	carcmaB1305
Carg23729	CmoCh15G010250	Cucurbita moschata (Rifu)	carcmoB1274
Carg23729	CmoCh04G022090	Cucurbita moschata (Rifu)	carcmoB1275
Carg23729	Lsi09G006850	Bottle gourd (USVL1VR-Ls)	carlsiB868
Carg23729	Cp4.1LG01g18250	Cucurbita pepo (Zucchini)	carcpeB1319
Carg23729	Cp4.1LG13g03510	Cucurbita pepo (Zucchini)	carcpeB1318
Carg23729	CsGy5G018740	Cucumber (Gy14) v2	carcgybB0940
Carg23729	MELO3C005275.2	Melon (DHL92) v3.6.1	carmedB0939
Carg23729	CsaV3_5G028120	Cucumber (Chinese Long) v3	carcucB0996
Carg23729	Cla97C01G006830	Watermelon (97103) v2	carwmbB1002
Carg23729	Bhi12G000816	Wax gourd	carwgoB1104

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg23729	Carg26057	Silver-seed gourd	carcarB440

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23729	Cucumber (Gy14) v2	carcgybB0941
Carg23729	Wild cucumber (PI 183967)	carcpiB0990
Carg23729	Cucumber (Chinese Long) v2	carcuB0969