Carg23628 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23628
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	RING-H2 finger protein
Location	Cucurbita_argyrosperma_scaffold_182 : 251228 .. 252469 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGACCGCCCCTTCCCCATCTCCATCTCCTTCTCCTTCTCCTTCCCCTTCCACCTCCTCCTCCGCTGCCGCCGCCGTCAATTTCCCTTCCCCCTCATCCTTACTGCCGGGAAAGCTCCCAGTCGACTTCAGCCCTCCTCTAATCGCAATGGTTGTCGTCATCGCTACCGCCTTTCTCATCGTCACTTACTCTCGCCTCATCTCCCGCCACGTCATCCCTCCAATCCTCCTCCTAATCCGCCGCCACCGCCGCCGCTGGCGGCGGTGGCGGCGGAGACGACGGCGCGCCCGATCTTACCTCCCGTCCTCCTCCGGCGGCGACTTGGATTCGCTCCCTTACGATTCGCCTTTCTTCGAGCATACGGATGGCTTCCACGTGTTCTCCCCGTACGGCCTCGACGAATCCATCATCAAGACGATTCCACTCTCCGTCTATACTGCCAAGAGCCGCCGTGACAGCCGTGACCGTGAGTGCGCCGTTTGTCTTCTGGAGTTTGAAGACGACGATTACGTCCGAACGCTTCCGATTTGTTCTCACGCATTTCACGTTGATTGTATAGACGTATGGCTTAGATCACACGCGAACTGTCCTCTCTGTCGCGCGGTGGTTTTCAGGCCAGAATCTCCGTTCACGCCGGTTATGGCAGCAAGAATCCGGCCAAGCCTCGACGAAACGATCTTACAGAGCATCGTATTAGAGCCGCTAGCGGAAGGTCCTATTCCTAATCGAGATTCTTATCACGCAACAGAATCGGAAATCACGCCTTGCGTTGATGAACCAAGGAACAGTAATTCGTTAGAGGATCAAATGAACGGGCGAGATTTCTTACTGAAACGATCGTATTCATTCGGATTCGAACGAAGCTTGGCGTCAGAGAGAATGATTCTGGAACCAGCAACCGCATCGCCATGGAGGTACCGCCGTGGAAGCTTCTGGAGCAAACGGCCATCACCGTTCGGATCTCTACCGAAGGCGAGAGTGTTCTCATTCCGATACTACAGAGGAATGAAATCGCCGTTCTTCAGACGACGAGGAGGATTCTTTCCGCTATCGGAATCAAGCTGGAGATTCTCCAACGGCGTAGGCGGAGGTTCATCGAGACGAAGCAAGTCGATGACAAGTCCAATGTTTCTCCGATCGTCGGTAACCAGCGGAGGAGCAGCAACGTTCTCATCGAGCCGATTGAGATGCGGAGATCCCGAGGCATTACTATCACCGGAGAGATTCAACCGAAGATGA

mRNA sequence

ATGTCGACCGCCCCTTCCCCATCTCCATCTCCTTCTCCTTCTCCTTCCCCTTCCACCTCCTCCTCCGCTGCCGCCGCCGTCAATTTCCCTTCCCCCTCATCCTTACTGCCGGGAAAGCTCCCAGTCGACTTCAGCCCTCCTCTAATCGCAATGGTTGTCGTCATCGCTACCGCCTTTCTCATCGTCACTTACTCTCGCCTCATCTCCCGCCACGTCATCCCTCCAATCCTCCTCCTAATCCGCCGCCACCGCCGCCGCTGGCGGCGGTGGCGGCGGAGACGACGGCGCGCCCGATCTTACCTCCCGTCCTCCTCCGGCGGCGACTTGGATTCGCTCCCTTACGATTCGCCTTTCTTCGAGCATACGGATGGCTTCCACGTGTTCTCCCCGTACGGCCTCGACGAATCCATCATCAAGACGATTCCACTCTCCGTCTATACTGCCAAGAGCCGCCGTGACAGCCGTGACCGTGAGTGCGCCGTTTGTCTTCTGGAGTTTGAAGACGACGATTACGTCCGAACGCTTCCGATTTGTTCTCACGCATTTCACGTTGATTGTATAGACGTATGGCTTAGATCACACGCGAACTGTCCTCTCTGTCGCGCGGTGGTTTTCAGGCCAGAATCTCCGTTCACGCCGGTTATGGCAGCAAGAATCCGGCCAAGCCTCGACGAAACGATCTTACAGAGCATCGTATTAGAGCCGCTAGCGGAAGGTCCTATTCCTAATCGAGATTCTTATCACGCAACAGAATCGGAAATCACGCCTTGCGTTGATGAACCAAGGAACAGTAATTCGTTAGAGGATCAAATGAACGGGCGAGATTTCTTACTGAAACGATCGTATTCATTCGGATTCGAACGAAGCTTGGCGTCAGAGAGAATGATTCTGGAACCAGCAACCGCATCGCCATGGAGGTACCGCCGTGGAAGCTTCTGGAGCAAACGGCCATCACCGTTCGGATCTCTACCGAAGGCGAGAGTGTTCTCATTCCGATACTACAGAGGAATGAAATCGCCGTTCTTCAGACGACGAGGAGGATTCTTTCCGCTATCGGAATCAAGCTGGAGATTCTCCAACGGCGTAGGCGGAGGTTCATCGAGACGAAGCAAGTCGATGACAAGTCCAATGTTTCTCCGATCGTCGGTAACCAGCGGAGGAGCAGCAACGTTCTCATCGAGCCGATTGAGATGCGGAGATCCCGAGGCATTACTATCACCGGAGAGATTCAACCGAAGATGA

Coding sequence (CDS)

ATGTCGACCGCCCCTTCCCCATCTCCATCTCCTTCTCCTTCTCCTTCCCCTTCCACCTCCTCCTCCGCTGCCGCCGCCGTCAATTTCCCTTCCCCCTCATCCTTACTGCCGGGAAAGCTCCCAGTCGACTTCAGCCCTCCTCTAATCGCAATGGTTGTCGTCATCGCTACCGCCTTTCTCATCGTCACTTACTCTCGCCTCATCTCCCGCCACGTCATCCCTCCAATCCTCCTCCTAATCCGCCGCCACCGCCGCCGCTGGCGGCGGTGGCGGCGGAGACGACGGCGCGCCCGATCTTACCTCCCGTCCTCCTCCGGCGGCGACTTGGATTCGCTCCCTTACGATTCGCCTTTCTTCGAGCATACGGATGGCTTCCACGTGTTCTCCCCGTACGGCCTCGACGAATCCATCATCAAGACGATTCCACTCTCCGTCTATACTGCCAAGAGCCGCCGTGACAGCCGTGACCGTGAGTGCGCCGTTTGTCTTCTGGAGTTTGAAGACGACGATTACGTCCGAACGCTTCCGATTTGTTCTCACGCATTTCACGTTGATTGTATAGACGTATGGCTTAGATCACACGCGAACTGTCCTCTCTGTCGCGCGGTGGTTTTCAGGCCAGAATCTCCGTTCACGCCGGTTATGGCAGCAAGAATCCGGCCAAGCCTCGACGAAACGATCTTACAGAGCATCGTATTAGAGCCGCTAGCGGAAGGTCCTATTCCTAATCGAGATTCTTATCACGCAACAGAATCGGAAATCACGCCTTGCGTTGATGAACCAAGGAACAGTAATTCGTTAGAGGATCAAATGAACGGGCGAGATTTCTTACTGAAACGATCGTATTCATTCGGATTCGAACGAAGCTTGGCGTCAGAGAGAATGATTCTGGAACCAGCAACCGCATCGCCATGGAGGTACCGCCGTGGAAGCTTCTGGAGCAAACGGCCATCACCGTTCGGATCTCTACCGAAGGCGAGAGTGTTCTCATTCCGATACTACAGAGGAATGAAATCGCCGTTCTTCAGACGACGAGGAGGATTCTTTCCGCTATCGGAATCAAGCTGGAGATTCTCCAACGGCGTAGGCGGAGGTTCATCGAGACGAAGCAAGTCGATGACAAGTCCAATGTTTCTCCGATCGTCGGTAACCAGCGGAGGAGCAGCAACGTTCTCATCGAGCCGATTGAGATGCGGAGATCCCGAGGCATTACTATCACCGGAGAGATTCAACCGAAGATGA

Protein sequence

MSTAPSPSPSPSPSPSPSTSSSAAAAVNFPSPSSLLPGKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHVIPPILLLIRRHRRRWRRWRRRRRRARSYLPSSSGGDLDSLPYDSPFFEHTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRPSLDETILQSIVLEPLAEGPIPNRDSYHATESEITPCVDEPRNSNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPATASPWRYRRGSFWSKRPSPFGSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR

Homology

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BLAST of Carg23628 vs. NCBI nr
Match: XP_022943929.1 (RING-H2 finger protein ATL65 [Cucurbita moschata])

HSP 1 Score: 708.4 bits (1827), Expect = 1.5e-200
Identity = 380/380 (100.00%), Postives = 380/380 (100.00%), Query Frame = 0


Query: 34  SLLPGKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHVIPPIXXXXXXXXXXXXXXXXX 93
           SLLPGKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHVIPPIXXXXXXXXXXXXXXXXX
Sbjct: 34  SLLPGKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHVIPPIXXXXXXXXXXXXXXXXX 93

Query: 94  XXXXXXYLPSSSGGDLDSLPYDSPFFEHTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRD 153
           XXXXXXYLPSSSGGDLDSLPYDSPFFEHTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRD
Sbjct: 94  XXXXXXYLPSSSGGDLDSLPYDSPFFEHTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRD 153

Query: 154 SRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTP 213
           SRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTP
Sbjct: 154 SRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTP 213

Query: 214 VMAARIRPSLDETILQSIVLEPLAEGPIPNRDSYHATESEITPCVDEPRNSNSLEDQMNG 273
           VMAARIRPSLDETILQSIVLEPLAEGPIPNRDSYHATESEITPCVDEPRNSNSLEDQMNG
Sbjct: 214 VMAARIRPSLDETILQSIVLEPLAEGPIPNRDSYHATESEITPCVDEPRNSNSLEDQMNG 273

Query: 274 RDFLLKRSYSFGFERSLASERMILEPATASPWRYRRGSFWSKRPSPFGSLPKARVFSFRY 333
           RDFLLKRSYSFGFERSLASERMILEPATASPWRYRRGSFWSKRPSPFGSLPKARVFSFRY
Sbjct: 274 RDFLLKRSYSFGFERSLASERMILEPATASPWRYRRGSFWSKRPSPFGSLPKARVFSFRY 333

Query: 334 YRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSS 393
           YRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSS
Sbjct: 334 YRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSS 393

Query: 394 SRLRCGDPEALLSPERFNRR 414
           SRLRCGDPEALLSPERFNRR
Sbjct: 394 SRLRCGDPEALLSPERFNRR 413

[Close]

BLAST of Carg23628 vs. NCBI nr
Match: XP_023511773.1 (RING-H2 finger protein ATL65 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 706.1 bits (1821), Expect = 7.2e-200
Identity = 378/380 (99.47%), Postives = 380/380 (100.00%), Query Frame = 0


Query: 34  SLLPGKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHVIPPIXXXXXXXXXXXXXXXXX 93
           SLLPGKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHVIPPIXXXXXXXXXXXXXXXXX
Sbjct: 35  SLLPGKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHVIPPIXXXXXXXXXXXXXXXXX 94

Query: 94  XXXXXXYLPSSSGGDLDSLPYDSPFFEHTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRD 153
           XXXXXXYLPSSSGGDLDSLPYDSPFFEHTDG+HVFSPYGLDESIIKTIPLSVYTAKSRRD
Sbjct: 95  XXXXXXYLPSSSGGDLDSLPYDSPFFEHTDGYHVFSPYGLDESIIKTIPLSVYTAKSRRD 154

Query: 154 SRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTP 213
           SRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTP
Sbjct: 155 SRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTP 214

Query: 214 VMAARIRPSLDETILQSIVLEPLAEGPIPNRDSYHATESEITPCVDEPRNSNSLEDQMNG 273
           VMAARIRPSLD+TILQSIVLEPLAEGPIPNRDSYHATESEITPCVDEPRNSNSLEDQMNG
Sbjct: 215 VMAARIRPSLDDTILQSIVLEPLAEGPIPNRDSYHATESEITPCVDEPRNSNSLEDQMNG 274

Query: 274 RDFLLKRSYSFGFERSLASERMILEPATASPWRYRRGSFWSKRPSPFGSLPKARVFSFRY 333
           RDFLLKRSYSFGFERSLASERMILEPATASPWRYRRGSFWSKRPSPFGSLPKARVFSFRY
Sbjct: 275 RDFLLKRSYSFGFERSLASERMILEPATASPWRYRRGSFWSKRPSPFGSLPKARVFSFRY 334

Query: 334 YRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSS 393
           YRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSS
Sbjct: 335 YRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSS 394

Query: 394 SRLRCGDPEALLSPERFNRR 414
           SRLRCGDPEALLSPERFNRR
Sbjct: 395 SRLRCGDPEALLSPERFNRR 414

[Close]

BLAST of Carg23628 vs. NCBI nr
Match: XP_022986546.1 (RING-H2 finger protein ATL65 [Cucurbita maxima])

HSP 1 Score: 698.0 bits (1800), Expect = 2.0e-197
Identity = 376/380 (98.95%), Postives = 378/380 (99.47%), Query Frame = 0


Query: 34  SLLPGKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHVIPPIXXXXXXXXXXXXXXXXX 93
           SLLP KLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHVIPPIXXXXXXXXXXXXXXXXX
Sbjct: 34  SLLPAKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHVIPPIXXXXXXXXXXXXXXXXX 93

Query: 94  XXXXXXYLPSSSGGDLDSLPYDSPFFEHTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRD 153
           XXXXXXYLPSSSGGDLDSLPYDSPFFEHTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRD
Sbjct: 94  XXXXXXYLPSSSGGDLDSLPYDSPFFEHTDGFHVFSPYGLDESIIKTIPLSVYTAKSRRD 153

Query: 154 SRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTP 213
           SRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTP
Sbjct: 154 SRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTP 213

Query: 214 VMAARIRPSLDETILQSIVLEPLAEGPIPNRDSYHATESEITPCVDEPRNSNSLEDQMNG 273
           VMAARIRPSLD+TILQSIVLEPLAEGPIPNRDSY+ATESEITP VDEPRNSNSLEDQMNG
Sbjct: 214 VMAARIRPSLDDTILQSIVLEPLAEGPIPNRDSYNATESEITPYVDEPRNSNSLEDQMNG 273

Query: 274 RDFLLKRSYSFGFERSLASERMILEPATASPWRYRRGSFWSKRPSPFGSLPKARVFSFRY 333
           RDFLLKRSYSFGFERSLASERMILEPATASPWRYRRGSFWSKRPSPFGSLPKARVFSFRY
Sbjct: 274 RDFLLKRSYSFGFERSLASERMILEPATASPWRYRRGSFWSKRPSPFGSLPKARVFSFRY 333

Query: 334 YRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSS 393
           YRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSS
Sbjct: 334 YRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRSKSMTSPMFLRSSVTSGGAATFSS 393

Query: 394 SRLRCGDPEALLSPERFNRR 414
           SRLRCGDPEALLSPERFNRR
Sbjct: 394 SRLRCGDPEALLSPERFNRR 413

[Close]

BLAST of Carg23628 vs. NCBI nr
Match: XP_004145402.2 (PREDICTED: RING-H2 finger protein ATL65 [Cucumis sativus] >KGN61760.1 hypothetical protein Csa_2G238760 [Cucumis sativus])

HSP 1 Score: 588.2 bits (1515), Expect = 2.2e-164
Identity = 327/384 (85.16%), Postives = 335/384 (87.24%), Query Frame = 0


Query: 34  SLLPGKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHVIPPI-XXXXXXXXXXXXXXXX 93
           SL P KLPVDFSPPLIAMVVVIATAFLIVTYSRLISRH+IPPI  XXXXXXXXXXXXXXX
Sbjct: 38  SLQPAKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHLIPPILHXXXXXXXXXXXXXXX 97

Query: 94  XXXXXXXYLPSSSGGDLDSLPYDSPFFE-HTDGFHVFSPYGLDESIIKTIPLSVYTAKSR 153
           XXX    Y+PSSSGGDLDSLPYDSPFFE  TD FHVFSPYGLDES+IKTIPLSVYTAK  
Sbjct: 98  XXXAARSYIPSSSGGDLDSLPYDSPFFEPTTDAFHVFSPYGLDESVIKTIPLSVYTAK-- 157

Query: 154 RDSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPF 213
             SRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPF
Sbjct: 158 --SRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPF 217

Query: 214 TPVMAARIRPSLDETILQSIVLEPLAEG-PIPNRDSYHATESEITPCVDEPRNSNSLEDQ 273
           TPVMAARIRPSLD+TIL+SI+LEPLAEG PIPNRDSYHATESEITPC+DEPRNSNS+EDQ
Sbjct: 218 TPVMAARIRPSLDDTILRSIILEPLAEGPPIPNRDSYHATESEITPCIDEPRNSNSVEDQ 277

Query: 274 MNGRDFLLKRSYSFGFERSLASERMILEPATASPWRYRRGSFWSKRPSPFGSLPKARVFS 333
           MNGRDFLLKRSYSFGFERSLASERMILEPAT SPWRYRRGSFWSKRPSPFGSLPKARVFS
Sbjct: 278 MNGRDFLLKRSYSFGFERSLASERMILEPATTSPWRYRRGSFWSKRPSPFGSLPKARVFS 337

Query: 334 FRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVG-GGSSRRSKSMTSPMFLRSSVTSGGAA 393
           FRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVG                           
Sbjct: 338 FRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGXXXXXXXXXXXXXXXXXXXXXXXXXXX 397

Query: 394 TFSSSRLRCGDPEALLSPERFNRR 414
                RLRCGDPEALLSPERFNRR
Sbjct: 398 XXXXXRLRCGDPEALLSPERFNRR 417

[Close]

BLAST of Carg23628 vs. NCBI nr
Match: XP_016902377.1 (PREDICTED: RING-H2 finger protein ATL65 [Cucumis melo])

HSP 1 Score: 581.6 bits (1498), Expect = 2.1e-162
Identity = 329/386 (85.23%), Postives = 337/386 (87.31%), Query Frame = 0


Query: 34  SLLPGKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHVIPPI-XXXXXXXXXXXXXXXX 93
           SL   KLPVDFSPPLIAMVVVIATAFLIVTYSRLISRH++PPI  XXXXXXXXXXXXXXX
Sbjct: 28  SLQSAKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHLVPPILHXXXXXXXXXXXXXXX 87

Query: 94  XXXXXXXYLPSSSGGDLDSLPYDSPFFE-HTDGFHVFSPYGLDESIIKTIPLSVYTAKSR 153
           XXXXXXXY+PSSSGGDLDSLPYDSPFFE  TD FHVFSPYGLDES+IKTIPLSVYTAK  
Sbjct: 88  XXXXXXXYIPSSSGGDLDSLPYDSPFFEPTTDAFHVFSPYGLDESVIKTIPLSVYTAK-- 147

Query: 154 RDSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPF 213
             SRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPF
Sbjct: 148 --SRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPF 207

Query: 214 TPVMAARIRPSLDETILQSIVLEPLAEGP-IPNRDSYHATESEITPCVDEPRNSNSLEDQ 273
           TPVMAARIRPSLD+TIL+SIVLEPLAEGP IPNRDSYHATESEITPC+DEPRNSNS+EDQ
Sbjct: 208 TPVMAARIRPSLDDTILRSIVLEPLAEGPLIPNRDSYHATESEITPCIDEPRNSNSVEDQ 267

Query: 274 MNGRDFLLKRSYSFGFERSLASERMILEPATASPWRYRRGSFWSKRPSPFGSLPKARVFS 333
           MNGRDFLLKRSYSFGFERSLASERMILEPAT SPWRYRRGSFWSKRPSPFGSLPKARVFS
Sbjct: 268 MNGRDFLLKRSYSFGFERSLASERMILEPATTSPWRYRRGSFWSKRPSPFGSLPKARVFS 327

Query: 334 FRYYRGMKSPFFRRRGGFFPLSESSWRFSNGV---GGGSSRRSKSMTSPMFLRSSVTSGG 393
           FRYYRGMKSPFFRRRGGFFPLSESSWRFSNGV                            
Sbjct: 328 FRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVXXXXXXXXXXXXXXXXXXXXXXXXXXXX 387

Query: 394 AATFSSSRLRCGDPEALLSPERFNRR 414
                  RLRCGDPEALLSPERFNRR
Sbjct: 388 XXXXXXXRLRCGDPEALLSPERFNRR 409

[Close]

BLAST of Carg23628 vs. TAIR10
Match: AT3G18930.1 (RING/U-box superfamily protein)

HSP 1 Score: 290.4 bits (742), Expect = 1.7e-78
Identity = 204/396 (51.52%), Postives = 247/396 (62.37%), Query Frame = 0


Query: 41  PVDFSPPLIAMVVVIATAFLIVTYSRLISRHVIPPIXXXXXXXXXXXXXXXXXXXXXXXY 100
           P++FSPPLIAMVVV+A AFL VTYSRLISR  + P+        XXXXXXXXXXXXXXX 
Sbjct: 35  PLEFSPPLIAMVVVLAAAFLFVTYSRLISRRFLSPL------FRXXXXXXXXXXXXXXXX 94

Query: 101 LPSSSGGDLDSLPYDSPFFEHTDGFHVFSPYGLDESIIKTIPLSVYTAKS---------R 160
                                          GLD+S+IKT+PL +Y+A +          
Sbjct: 95  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDDSVIKTLPLFLYSAAACTGKPAVGKT 154

Query: 161 RDSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCR------AVVF 220
             +  R+CAVCLLEFE+ DYVRTLP+C HAFH++CID WLRSH NCPLCR      A V 
Sbjct: 155 SAANCRDCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAILGSAGVL 214

Query: 221 RPESPFTPVMAARIRPSLDETILQSIVLEPLAEGPI-PNRDSYHATESEITPCVDEPRNS 280
            P SPF P+MA RIRPSLD+    +I++     G I P+R +++   ++ T   ++    
Sbjct: 215 TPMSPFVPLMAPRIRPSLDDEENNAIII----RGEITPSRSNWNTIAADTT---NDQEIR 274

Query: 281 NSLEDQMN---GRDFLLKRSYSFGFERSLASERMILEPATASPWRYRRGSFWSKRPSPFG 340
            S+E+Q +    R   LKRSYSF  ER   SER+ +EPAT SPWRYRR S W+KR SPFG
Sbjct: 275 ASVEEQSSPAISRFRELKRSYSFECERESESERVTMEPATVSPWRYRR-STWNKRQSPFG 334

Query: 341 SL-PKARVFSFRYYRGMKSPFFRRR---GGFFPLSESSWRFSNGVGGGSSRRSKSMTSPM 400
           +L  K+RVFSFRYYR  KSPFFRRR   G F+P+SE          G SSRR+KSMTSPM
Sbjct: 335 NLISKSRVFSFRYYRSTKSPFFRRRSSAGVFYPISERI-----PATGSSSRRTKSMTSPM 394

Query: 401 FLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR 414
           F R+       A  SSSRLRCGDPEALLSPER+ RR
Sbjct: 395 FFRT-------APHSSSRLRCGDPEALLSPERWRRR 404

[Close]

BLAST of Carg23628 vs. TAIR10
Match: AT3G62690.1 (AtL5)

HSP 1 Score: 95.5 bits (236), Expect = 8.1e-20
Identity = 47/92 (51.09%), Postives = 62/92 (67.39%), Query Frame = 0


Query: 133 LDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLR 192
           LD ++++ IP+ VY+ K+  +S   EC+VCL EFE+DD  R LP C H FHVDCID W R
Sbjct: 88  LDPTVLEKIPIFVYSVKT-HESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFR 147

Query: 193 SHANCPLCRAVVFRPESPFT-PVMAARIRPSL 224
           S ++CPLCRA V +P  P T P   A + PS+
Sbjct: 148 SRSSCPLCRAPV-QPAQPVTEPEPVAAVFPSV 177

[Close]

BLAST of Carg23628 vs. TAIR10
Match: AT4G40070.1 (RING/U-box superfamily protein)

HSP 1 Score: 94.4 bits (233), Expect = 1.8e-19
Identity = 38/73 (52.05%), Postives = 55/73 (75.34%), Query Frame = 0


Query: 132 GLDESIIKTIPLSVYTA--KSRRDSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDV 191
           GLD +++++ P+  Y++  +S+  S+D ECA+CL E ED + VR LPIC+H FH+DCID 
Sbjct: 95  GLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDT 154

Query: 192 WLRSHANCPLCRA 203
           WL SHA CP+CR+
Sbjct: 155 WLYSHATCPVCRS 167

[Close]

BLAST of Carg23628 vs. TAIR10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2)

HSP 1 Score: 93.2 bits (230), Expect = 4.0e-19
Identity = 61/181 (33.70%), Postives = 96/181 (53.04%), Query Frame = 0


Query: 127 VFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDC 186
           V +  GLD ++IK++P+  ++ ++ +D    ECAVCL EFE+ +  R LP C H FHVDC
Sbjct: 89  VVASRGLDPNVIKSLPVFTFSDETHKD--PIECAVCLSEFEESETGRVLPNCQHTFHVDC 148

Query: 187 IDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRP---SLDETILQSIVLEP-----LAE 246
           ID+W  SH+ CPLCR++V    +      AAR R    ++D   +  +V+EP     L +
Sbjct: 149 IDMWFHSHSTCPLCRSLV-ESLAGIESTAAAREREVVIAVDSDPV--LVIEPSSSSGLTD 208

Query: 247 GPIPNRDSYHATE--SEITPCVDEPRNS-NSLEDQMNGRDFLLKRSYSFGFERSLASERM 297
            P  +  S    E        ++ PR + +  ED++  RD    +S+     R L+  RM
Sbjct: 209 EPHGSGSSQMLREDSGRKPAAIEVPRRTFSEFEDELTRRDSPASQSFRSPMSRMLSFTRM 264

[Close]

BLAST of Carg23628 vs. TAIR10
Match: AT5G43420.1 (RING/U-box superfamily protein)

HSP 1 Score: 92.8 bits (229), Expect = 5.3e-19
Identity = 45/99 (45.45%), Postives = 63/99 (63.64%), Query Frame = 0


Query: 123 DGFHVFSP----YGLDESIIKTIPL-----------SVYT--AKSRRDSRDRECAVCLLE 182
           D   V+SP     GLDES+I+ IP+            V+T   +   + R +EC+VCL E
Sbjct: 85  DPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSE 144

Query: 183 FEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVV 205
           F+D++ +R +P CSH FH+DCIDVWL+++ANCPLCR  V
Sbjct: 145 FQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRV 183

[Close]

BLAST of Carg23628 vs. Swiss-Prot
Match: sp|Q67YI6|ATL65_ARATH (RING-H2 finger protein ATL65 OS=Arabidopsis thaliana OX=3702 GN=ATL65 PE=2 SV=2)

HSP 1 Score: 290.4 bits (742), Expect = 3.1e-77
Identity = 204/396 (51.52%), Postives = 247/396 (62.37%), Query Frame = 0


Query: 41  PVDFSPPLIAMVVVIATAFLIVTYSRLISRHVIPPIXXXXXXXXXXXXXXXXXXXXXXXY 100
           P++FSPPLIAMVVV+A AFL VTYSRLISR  + P+        XXXXXXXXXXXXXXX 
Sbjct: 35  PLEFSPPLIAMVVVLAAAFLFVTYSRLISRRFLSPL------FRXXXXXXXXXXXXXXXX 94

Query: 101 LPSSSGGDLDSLPYDSPFFEHTDGFHVFSPYGLDESIIKTIPLSVYTAKS---------R 160
                                          GLD+S+IKT+PL +Y+A +          
Sbjct: 95  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLDDSVIKTLPLFLYSAAACTGKPAVGKT 154

Query: 161 RDSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCR------AVVF 220
             +  R+CAVCLLEFE+ DYVRTLP+C HAFH++CID WLRSH NCPLCR      A V 
Sbjct: 155 SAANCRDCAVCLLEFEEGDYVRTLPLCFHAFHLECIDEWLRSHPNCPLCRTAILGSAGVL 214

Query: 221 RPESPFTPVMAARIRPSLDETILQSIVLEPLAEGPI-PNRDSYHATESEITPCVDEPRNS 280
            P SPF P+MA RIRPSLD+    +I++     G I P+R +++   ++ T   ++    
Sbjct: 215 TPMSPFVPLMAPRIRPSLDDEENNAIII----RGEITPSRSNWNTIAADTT---NDQEIR 274

Query: 281 NSLEDQMN---GRDFLLKRSYSFGFERSLASERMILEPATASPWRYRRGSFWSKRPSPFG 340
            S+E+Q +    R   LKRSYSF  ER   SER+ +EPAT SPWRYRR S W+KR SPFG
Sbjct: 275 ASVEEQSSPAISRFRELKRSYSFECERESESERVTMEPATVSPWRYRR-STWNKRQSPFG 334

Query: 341 SL-PKARVFSFRYYRGMKSPFFRRR---GGFFPLSESSWRFSNGVGGGSSRRSKSMTSPM 400
           +L  K+RVFSFRYYR  KSPFFRRR   G F+P+SE          G SSRR+KSMTSPM
Sbjct: 335 NLISKSRVFSFRYYRSTKSPFFRRRSSAGVFYPISERI-----PATGSSSRRTKSMTSPM 394

Query: 401 FLRSSVTSGGAATFSSSRLRCGDPEALLSPERFNRR 414
           F R+       A  SSSRLRCGDPEALLSPER+ RR
Sbjct: 395 FFRT-------APHSSSRLRCGDPEALLSPERWRRR 404

[Close]

BLAST of Carg23628 vs. Swiss-Prot
Match: sp|Q9LZJ6|ATL5_ARATH (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 1.5e-18
Identity = 47/92 (51.09%), Postives = 62/92 (67.39%), Query Frame = 0


Query: 133 LDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLR 192
           LD ++++ IP+ VY+ K+  +S   EC+VCL EFE+DD  R LP C H FHVDCID W R
Sbjct: 88  LDPTVLEKIPIFVYSVKT-HESPLEECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFR 147

Query: 193 SHANCPLCRAVVFRPESPFT-PVMAARIRPSL 224
           S ++CPLCRA V +P  P T P   A + PS+
Sbjct: 148 SRSSCPLCRAPV-QPAQPVTEPEPVAAVFPSV 177

[Close]

BLAST of Carg23628 vs. Swiss-Prot
Match: sp|Q8W571|ATL32_ARATH (RING-H2 finger protein ATL32 OS=Arabidopsis thaliana OX=3702 GN=ATL32 PE=2 SV=3)

HSP 1 Score: 94.4 bits (233), Expect = 3.3e-18
Identity = 38/73 (52.05%), Postives = 55/73 (75.34%), Query Frame = 0


Query: 132 GLDESIIKTIPLSVYTA--KSRRDSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDV 191
           GLD +++++ P+  Y++  +S+  S+D ECA+CL E ED + VR LPIC+H FH+DCID 
Sbjct: 95  GLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNHLFHIDCIDT 154

Query: 192 WLRSHANCPLCRA 203
           WL SHA CP+CR+
Sbjct: 155 WLYSHATCPVCRS 167

[Close]

BLAST of Carg23628 vs. Swiss-Prot
Match: sp|Q8L9T5|ATL2_ARATH (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 93.2 bits (230), Expect = 7.2e-18
Identity = 61/181 (33.70%), Postives = 96/181 (53.04%), Query Frame = 0


Query: 127 VFSPYGLDESIIKTIPLSVYTAKSRRDSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDC 186
           V +  GLD ++IK++P+  ++ ++ +D    ECAVCL EFE+ +  R LP C H FHVDC
Sbjct: 89  VVASRGLDPNVIKSLPVFTFSDETHKD--PIECAVCLSEFEESETGRVLPNCQHTFHVDC 148

Query: 187 IDVWLRSHANCPLCRAVVFRPESPFTPVMAARIRP---SLDETILQSIVLEP-----LAE 246
           ID+W  SH+ CPLCR++V    +      AAR R    ++D   +  +V+EP     L +
Sbjct: 149 IDMWFHSHSTCPLCRSLV-ESLAGIESTAAAREREVVIAVDSDPV--LVIEPSSSSGLTD 208

Query: 247 GPIPNRDSYHATE--SEITPCVDEPRNS-NSLEDQMNGRDFLLKRSYSFGFERSLASERM 297
            P  +  S    E        ++ PR + +  ED++  RD    +S+     R L+  RM
Sbjct: 209 EPHGSGSSQMLREDSGRKPAAIEVPRRTFSEFEDELTRRDSPASQSFRSPMSRMLSFTRM 264

[Close]

BLAST of Carg23628 vs. Swiss-Prot
Match: sp|Q9LSW9|ATL16_ARATH (RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 9.5e-18
Identity = 45/99 (45.45%), Postives = 63/99 (63.64%), Query Frame = 0


Query: 123 DGFHVFSP----YGLDESIIKTIPL-----------SVYT--AKSRRDSRDRECAVCLLE 182
           D   V+SP     GLDES+I+ IP+            V+T   +   + R +EC+VCL E
Sbjct: 85  DPLMVYSPELRSRGLDESVIRAIPIFKFKKRYDQNDGVFTGEGEEEEEKRSQECSVCLSE 144

Query: 183 FEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVV 205
           F+D++ +R +P CSH FH+DCIDVWL+++ANCPLCR  V
Sbjct: 145 FQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRTRV 183

[Close]

BLAST of Carg23628 vs. TrEMBL
Match: tr|A0A0A0LIL3|A0A0A0LIL3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G238760 PE=4 SV=1)

HSP 1 Score: 588.2 bits (1515), Expect = 1.5e-164
Identity = 327/384 (85.16%), Postives = 335/384 (87.24%), Query Frame = 0


Query: 34  SLLPGKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHVIPPI-XXXXXXXXXXXXXXXX 93
           SL P KLPVDFSPPLIAMVVVIATAFLIVTYSRLISRH+IPPI  XXXXXXXXXXXXXXX
Sbjct: 38  SLQPAKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHLIPPILHXXXXXXXXXXXXXXX 97

Query: 94  XXXXXXXYLPSSSGGDLDSLPYDSPFFE-HTDGFHVFSPYGLDESIIKTIPLSVYTAKSR 153
           XXX    Y+PSSSGGDLDSLPYDSPFFE  TD FHVFSPYGLDES+IKTIPLSVYTAK  
Sbjct: 98  XXXAARSYIPSSSGGDLDSLPYDSPFFEPTTDAFHVFSPYGLDESVIKTIPLSVYTAK-- 157

Query: 154 RDSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPF 213
             SRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPF
Sbjct: 158 --SRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPF 217

Query: 214 TPVMAARIRPSLDETILQSIVLEPLAEG-PIPNRDSYHATESEITPCVDEPRNSNSLEDQ 273
           TPVMAARIRPSLD+TIL+SI+LEPLAEG PIPNRDSYHATESEITPC+DEPRNSNS+EDQ
Sbjct: 218 TPVMAARIRPSLDDTILRSIILEPLAEGPPIPNRDSYHATESEITPCIDEPRNSNSVEDQ 277

Query: 274 MNGRDFLLKRSYSFGFERSLASERMILEPATASPWRYRRGSFWSKRPSPFGSLPKARVFS 333
           MNGRDFLLKRSYSFGFERSLASERMILEPAT SPWRYRRGSFWSKRPSPFGSLPKARVFS
Sbjct: 278 MNGRDFLLKRSYSFGFERSLASERMILEPATTSPWRYRRGSFWSKRPSPFGSLPKARVFS 337

Query: 334 FRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVG-GGSSRRSKSMTSPMFLRSSVTSGGAA 393
           FRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVG                           
Sbjct: 338 FRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGXXXXXXXXXXXXXXXXXXXXXXXXXXX 397

Query: 394 TFSSSRLRCGDPEALLSPERFNRR 414
                RLRCGDPEALLSPERFNRR
Sbjct: 398 XXXXXRLRCGDPEALLSPERFNRR 417

[Close]

BLAST of Carg23628 vs. TrEMBL
Match: tr|A0A1S4E2C5|A0A1S4E2C5_CUCME (RING-H2 finger protein ATL65 OS=Cucumis melo OX=3656 GN=LOC103498427 PE=4 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 1.4e-162
Identity = 329/386 (85.23%), Postives = 337/386 (87.31%), Query Frame = 0


Query: 34  SLLPGKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHVIPPI-XXXXXXXXXXXXXXXX 93
           SL   KLPVDFSPPLIAMVVVIATAFLIVTYSRLISRH++PPI  XXXXXXXXXXXXXXX
Sbjct: 28  SLQSAKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHLVPPILHXXXXXXXXXXXXXXX 87

Query: 94  XXXXXXXYLPSSSGGDLDSLPYDSPFFE-HTDGFHVFSPYGLDESIIKTIPLSVYTAKSR 153
           XXXXXXXY+PSSSGGDLDSLPYDSPFFE  TD FHVFSPYGLDES+IKTIPLSVYTAK  
Sbjct: 88  XXXXXXXYIPSSSGGDLDSLPYDSPFFEPTTDAFHVFSPYGLDESVIKTIPLSVYTAK-- 147

Query: 154 RDSRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPF 213
             SRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPF
Sbjct: 148 --SRDRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPF 207

Query: 214 TPVMAARIRPSLDETILQSIVLEPLAEGP-IPNRDSYHATESEITPCVDEPRNSNSLEDQ 273
           TPVMAARIRPSLD+TIL+SIVLEPLAEGP IPNRDSYHATESEITPC+DEPRNSNS+EDQ
Sbjct: 208 TPVMAARIRPSLDDTILRSIVLEPLAEGPLIPNRDSYHATESEITPCIDEPRNSNSVEDQ 267

Query: 274 MNGRDFLLKRSYSFGFERSLASERMILEPATASPWRYRRGSFWSKRPSPFGSLPKARVFS 333
           MNGRDFLLKRSYSFGFERSLASERMILEPAT SPWRYRRGSFWSKRPSPFGSLPKARVFS
Sbjct: 268 MNGRDFLLKRSYSFGFERSLASERMILEPATTSPWRYRRGSFWSKRPSPFGSLPKARVFS 327

Query: 334 FRYYRGMKSPFFRRRGGFFPLSESSWRFSNGV---GGGSSRRSKSMTSPMFLRSSVTSGG 393
           FRYYRGMKSPFFRRRGGFFPLSESSWRFSNGV                            
Sbjct: 328 FRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVXXXXXXXXXXXXXXXXXXXXXXXXXXXX 387

Query: 394 AATFSSSRLRCGDPEALLSPERFNRR 414
                  RLRCGDPEALLSPERFNRR
Sbjct: 388 XXXXXXXRLRCGDPEALLSPERFNRR 409

[Close]

BLAST of Carg23628 vs. TrEMBL
Match: tr|A0A2P5B7H3|A0A2P5B7H3_9ROSA (43kDa postsynaptic protein OS=Trema orientalis OX=63057 GN=TorRG33x02_330210 PE=4 SV=1)

HSP 1 Score: 511.9 bits (1317), Expect = 1.3e-141
Identity = 297/393 (75.57%), Postives = 323/393 (82.19%), Query Frame = 0


Query: 37  PGKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHVIPPIXXXXXXXXXXXXXXXXXXXX 96
           P KLPVDFSPPLIAMVVV+ATAFLIVTYSRLISRHVIPP+       XXXXXXXXXXXXX
Sbjct: 60  PSKLPVDFSPPLIAMVVVVATAFLIVTYSRLISRHVIPPV------LXXXXXXXXXXXXX 119

Query: 97  XXXYLPSSSGGDLDSLPYDSPFFEHTDGFHVFSPYGLDESIIKTIPLSVYTA-KSRRDSR 156
           XXXYLPSS+ GDLDSLPYDSP FE +DGFHVFSPYGLD+S+IKTIPLS+YTA K      
Sbjct: 120 XXXYLPSSA-GDLDSLPYDSP-FEASDGFHVFSPYGLDDSVIKTIPLSIYTAGKGGGGGT 179

Query: 157 DRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVM 216
            R+CAVCL+EFE+DDYVRTLP+CSHAFHVDCID+WLRSHANCPLCRA +FRPESPF P+M
Sbjct: 180 PRDCAVCLIEFEEDDYVRTLPVCSHAFHVDCIDMWLRSHANCPLCRAGIFRPESPFIPLM 239

Query: 217 AARIRPSLDETILQSIV-LEPLAEGPIPNRDSYHATESEITPCVDE---PRN-------- 276
           AARIRPSLD+ +L+S+V LEPL E P P   +   T  EITPCVDE   PR         
Sbjct: 240 AARIRPSLDDAVLRSMVALEPLTEAP-PEYSASSTTVMEITPCVDELASPRRNSCNNYNY 299

Query: 277 --SNSLEDQMNGRDFLLKRSYSFGFERSLASER-MILEPATASPWRYRRGSFWSKRPSPF 336
             S+S + ++NGRDFLLKRSYSFGFER  ASER M+ EPATASPWRYRRG FWSKRPSPF
Sbjct: 300 NASHSEDHRINGRDFLLKRSYSFGFERGAASERMMVTEPATASPWRYRRGGFWSKRPSPF 359

Query: 337 GSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRSKSMTSPMFLR 396
           GSL K RVFSFRYYRGMKSPFFRR  GFFPLSESS RFS   GGGSSRR+KSMTSPMF+R
Sbjct: 360 GSLGKPRVFSFRYYRGMKSPFFRRGRGFFPLSESSARFS---GGGSSRRTKSMTSPMFMR 419

Query: 397 SSVTSGGAATFSSSRLRCGDPEALLSPERFNRR 414
            S  S  A  FSSSRLRCGDPEALLSPERFNRR
Sbjct: 420 PS--SSSAVAFSSSRLRCGDPEALLSPERFNRR 438

[Close]

BLAST of Carg23628 vs. TrEMBL
Match: tr|A0A2P4J031|A0A2P4J031_QUESU (Ring-h2 finger protein atl65 OS=Quercus suber OX=58331 GN=CFP56_62986 PE=4 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 4.3e-140
Identity = 285/390 (73.08%), Postives = 314/390 (80.51%), Query Frame = 0


Query: 37  PGKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHVIPPIXXXXXXXXXXXXXXXXXXXX 96
           P KLPV FSPPLI MVV++ATAFLIVTYSRLISRHVIPPI       XXXXXXXXXXXX 
Sbjct: 50  PSKLPVQFSPPLIVMVVIVATAFLIVTYSRLISRHVIPPI----LRVXXXXXXXXXXXXG 109

Query: 97  XXXYLPSSSGGDLDSLPYDSPFFEHTDGFHVFSPYGLDESIIKTIPLSV-YTAKSRRDSR 156
              YLPSSS GDLDSLP+DSPFFE +DGFHV SPYGLDES+IKTIPL++ YT K  R+ R
Sbjct: 110 ARSYLPSSS-GDLDSLPFDSPFFETSDGFHVCSPYGLDESVIKTIPLALYYTTKPYRERR 169

Query: 157 DRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVM 216
           D  CAVCLLEFEDDDYVRTLP+CSHAFHVDCID+WLRSHANCPLCRA + RPESPF PVM
Sbjct: 170 D--CAVCLLEFEDDDYVRTLPVCSHAFHVDCIDIWLRSHANCPLCRAGIIRPESPFVPVM 229

Query: 217 AARIRPSLDETILQSIVLEPLAEGPIPNRDSYHATESEITPCVDEP---RN--------- 276
           AARIRPSLD++IL+S   E L     P  DS   + SEITPC++E    RN         
Sbjct: 230 AARIRPSLDDSILRSFG-ERLESEAFP--DSRRGSLSEITPCIEEQSPLRNHXXXXXXXX 289

Query: 277 SNSLEDQMNGRDFLLKRSYSFGFERSLASERMILEPATASPWRYRRGSFWSKRPSPFGSL 336
               E++ NGRDF+LKRSYSFGFER+LASERM++EPAT SPWRYRRG+FW+KRPSPFGS+
Sbjct: 290 XXXXEERFNGRDFMLKRSYSFGFERNLASERMVMEPATTSPWRYRRGNFWNKRPSPFGSI 349

Query: 337 PKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRSKSMTSPMFLRSSV 396
            K RVFSFRYYRGMKSPFFRRR GF PLSE      NGVGGGSSRR+KSMTSPMF+RSS 
Sbjct: 350 TKPRVFSFRYYRGMKSPFFRRR-GFLPLSERFAGSGNGVGGGSSRRTKSMTSPMFMRSSA 409

Query: 397 TSGGAATFSSSRLRCGDPEALLSPERFNRR 414
              GAA FSSSRLRCGDPEALLSP+RFNRR
Sbjct: 410 AVAGAAAFSSSRLRCGDPEALLSPDRFNRR 428

[Close]

BLAST of Carg23628 vs. TrEMBL
Match: tr|A0A2P5DUF0|A0A2P5DUF0_PARAD (43kDa postsynaptic protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_032430 PE=4 SV=1)

HSP 1 Score: 500.7 bits (1288), Expect = 3.0e-138
Identity = 290/393 (73.79%), Postives = 317/393 (80.66%), Query Frame = 0


Query: 37  PGKLPVDFSPPLIAMVVVIATAFLIVTYSRLISRHVIPPIXXXXXXXXXXXXXXXXXXXX 96
           P KLPVDFSPPLIAMV V+ATAFLIVTYSRLISRHVIPP+        XXXXXXXXXXXX
Sbjct: 62  PSKLPVDFSPPLIAMVAVVATAFLIVTYSRLISRHVIPPV------LRXXXXXXXXXXXX 121

Query: 97  XXXYLPSSSGGDLDSLPYDSPFFEHTDGFHVFSPYGLDESIIKTIPLSVY-TAKSRRDSR 156
           XXXYLPSS+ GDLDSLPYDSP FE +DGFHVFSPYGLD+S+IKTIPL +Y T K      
Sbjct: 122 XXXYLPSSA-GDLDSLPYDSP-FEASDGFHVFSPYGLDDSVIKTIPLCIYTTGKGGGGGT 181

Query: 157 DRECAVCLLEFEDDDYVRTLPICSHAFHVDCIDVWLRSHANCPLCRAVVFRPESPFTPVM 216
            R+CAVCL+EFE+DDYVRTLP+CSHAFHVDCID+WLRSHANCPLCRA +FRPESPF P+M
Sbjct: 182 PRDCAVCLIEFEEDDYVRTLPVCSHAFHVDCIDMWLRSHANCPLCRAGIFRPESPFIPLM 241

Query: 217 AARIRPSLDETILQSIV-LEPLAEGPIPNRDSYHATESEITPCVDE---PRN-------- 276
           A RIRPSLD+  L+S+V LEPL E P P   +   T  EITPCVDE   PR         
Sbjct: 242 APRIRPSLDDAALRSMVALEPLTEAP-PEYSASSTTVMEITPCVDELASPRRNSCSNYNY 301

Query: 277 --SNSLEDQMNGRDFLLKRSYSFGFERSLASER-MILEPATASPWRYRRGSFWSKRPSPF 336
             S+S + ++NGRDFLLKRSYSFGFER  ASER M+ EPATASPWRYRRG FW+KRPSPF
Sbjct: 302 IASHSEDHRINGRDFLLKRSYSFGFERGAASERMMVTEPATASPWRYRRGGFWNKRPSPF 361

Query: 337 GSLPKARVFSFRYYRGMKSPFFRRRGGFFPLSESSWRFSNGVGGGSSRRSKSMTSPMFLR 396
           GSL K RVFSFRYYRGMKSPFFRR  GFFPLSESS RFS   GGGSSRR+KSMTSP+F+R
Sbjct: 362 GSLGKPRVFSFRYYRGMKSPFFRRGRGFFPLSESSARFS---GGGSSRRTKSMTSPIFMR 421

Query: 397 SSVTSGGAATFSSSRLRCGDPEALLSPERFNRR 414
            S  S  A  FSSSRLRCGDPEALLSPERFNRR
Sbjct: 422 PS--SSSAVAFSSSRLRCGDPEALLSPERFNRR 440

The following BLAST results are available for this feature:

BLAST of Carg23628 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943929.1	1.5e-200	100.00	RING-H2 finger protein ATL65 [Cucurbita moschata]	[more]
XP_023511773.1	7.2e-200	99.47	RING-H2 finger protein ATL65 [Cucurbita pepo subsp. pepo]	[more]
XP_022986546.1	2.0e-197	98.95	RING-H2 finger protein ATL65 [Cucurbita maxima]	[more]
XP_004145402.2	2.2e-164	85.16	PREDICTED: RING-H2 finger protein ATL65 [Cucumis sativus] >KGN61760.1 hypothetic...	[more]
XP_016902377.1	2.1e-162	85.23	PREDICTED: RING-H2 finger protein ATL65 [Cucumis melo]	[more]

BLAST of Carg23628 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18930.1	1.7e-78	51.52	RING/U-box superfamily protein	[more]
AT3G62690.1	8.1e-20	51.09	AtL5	[more]
AT4G40070.1	1.8e-19	52.05	RING/U-box superfamily protein	[more]
AT3G16720.1	4.0e-19	33.70	TOXICOS EN LEVADURA 2	[more]
AT5G43420.1	5.3e-19	45.45	RING/U-box superfamily protein	[more]

BLAST of Carg23628 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q67YI6\|ATL65_ARATH	3.1e-77	51.52	RING-H2 finger protein ATL65 OS=Arabidopsis thaliana OX=3702 GN=ATL65 PE=2 SV=2	[more]
sp\|Q9LZJ6\|ATL5_ARATH	1.5e-18	51.09	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]
sp\|Q8W571\|ATL32_ARATH	3.3e-18	52.05	RING-H2 finger protein ATL32 OS=Arabidopsis thaliana OX=3702 GN=ATL32 PE=2 SV=3	[more]
sp\|Q8L9T5\|ATL2_ARATH	7.2e-18	33.70	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2	[more]
sp\|Q9LSW9\|ATL16_ARATH	9.5e-18	45.45	RING-H2 finger protein ATL16 OS=Arabidopsis thaliana OX=3702 GN=ATL16 PE=2 SV=1	[more]

BLAST of Carg23628 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LIL3\|A0A0A0LIL3_CUCSA	1.5e-164	85.16	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G238760 PE=4 SV=1	[more]
tr\|A0A1S4E2C5\|A0A1S4E2C5_CUCME	1.4e-162	85.23	RING-H2 finger protein ATL65 OS=Cucumis melo OX=3656 GN=LOC103498427 PE=4 SV=1	[more]
tr\|A0A2P5B7H3\|A0A2P5B7H3_9ROSA	1.3e-141	75.57	43kDa postsynaptic protein OS=Trema orientalis OX=63057 GN=TorRG33x02_330210 PE=...	[more]
tr\|A0A2P4J031\|A0A2P4J031_QUESU	4.3e-140	73.08	Ring-h2 finger protein atl65 OS=Quercus suber OX=58331 GN=CFP56_62986 PE=4 SV=1	[more]
tr\|A0A2P5DUF0\|A0A2P5DUF0_PARAD	3.0e-138	73.79	43kDa postsynaptic protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_032430...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23628-RA	Carg23628-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 159..200 e-value: 1.5E-6 score: 37.7
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 158..201 e-value: 1.3E-13 score: 50.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 159..201 score: 12.209
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 121..205 e-value: 5.8E-22 score: 79.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR14155:SF185	RING-H2 FINGER PROTEIN ATL65	coord: 3..320
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 3..320
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 158..201 e-value: 3.96926E-19 score: 79.6533
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 150..207

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23628	Cla010291	Watermelon (97103) v1	carwmB0794
Carg23628	Csa2G238760	Cucumber (Chinese Long) v2	carcuB0812
Carg23628	MELO3C021942	Melon (DHL92) v3.5.1	carmeB0794
Carg23628	ClCG09G017770	Watermelon (Charleston Gray)	carwcgB0769
Carg23628	CSPI02G11850	Wild cucumber (PI 183967)	carcpiB0831
Carg23628	Cucsa.109930	Cucumber (Gy14) v1	carcgyB0907
Carg23628	CmaCh20G008760	Cucurbita maxima (Rimu)	carcmaB1104
Carg23628	CmoCh20G008830	Cucurbita moschata (Rifu)	carcmoB1073
Carg23628	Lsi10G003320	Bottle gourd (USVL1VR-Ls)	carlsiB731
Carg23628	Cp4.1LG16g02230	Cucurbita pepo (Zucchini)	carcpeB1113
Carg23628	CsGy2G011880	Cucumber (Gy14) v2	carcgybB0786
Carg23628	MELO3C021942.2	Melon (DHL92) v3.6.1	carmedB0806
Carg23628	CsaV3_2G014360	Cucumber (Chinese Long) v3	carcucB0835
Carg23628	Cla97C09G179160	Watermelon (97103) v2	carwmbB0833
Carg23628	Bhi10G001666	Wax gourd	carwgoB0931

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23628	Wax gourd	carwgoB0930
Carg23628	Silver-seed gourd	carcarB619
Carg23628	Cucurbita maxima (Rimu)	carcmaB1105
Carg23628	Cucurbita moschata (Rifu)	carcmoB1074
Carg23628	Cucurbita pepo (Zucchini)	carcpeB1114