Carg23620 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23620
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	CCG-binding protein 1
Location	Cucurbita_argyrosperma_scaffold_182 : 179047 .. 180283 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CATCCTTATCTATTTTTTGTTCATCTTCTTCCTCACAATTGCTCTCGATTTCTGCAACAAGCGATGGAATCATCCCTTCTCCGTTCTGCTTCATCTCCTTTACTTCTCGAATCCACGGATCTTCTTCGCCGGATCGGATCCGTTTCCTCTCCGAGATTTCCTTCTACCGTTGTTCGTTGTTCTTCCAGAAGCCATGCTTCTATTCCGAAGCTCGAGCCGTTTAGTCGCACGAAGCTTGATCGCGCCATCAAAGATCCGCCTCTGGTTGAGAAGTCCGAGAACGAGCTTGCAGGTTTGGCTATTGATTTCAGAGGAAGTTGTTTTGACATGGAATCATTTTTGTGTTTCTGATCCTTTGCGATTTCTTGTTTTCTGTTTGGTCTGGTTTAGATTACTGCTCGACATTGGATGGAGACGATTCATATAGCTGTTGGAAAGCGTATTTCGAGCTCAAAGATCTTGAAGTGAGTTTCTAGGGATTCTCGATTGATTTTCGTTCCAGATTTTTCTGTTATTTCGCGTTTGGTTTCCCGTTTCCCCCAAATCCGATGAATTCTAGACCTAATTTTAAACGAGAGAGGAAACATGCGAATTAATTAATCAACGAACTAATTAATCGCTGTGTGTGTGTTTTCAGAAAGAGTCGCCTAAACAAGAAGTGGAGAAACTGATTCTTCAAGCAGGAGGCGTGAAATCGCTGATCGGACTCTTACACGGCATCGCGGGCATACACAAGAGGAAGGAAAGCGAAAACGAGGCGAAGAAGCCATTGAACCGCGTGGAAAGAAGAGTGAGAGATTGTCCAATACCAGATGGATTGCCGAAATCCGCAGAGGAAATTGAAGAAGAAGAAGGAGCGAGAATGCCGGATTCACCATTTACGAGATTGCTGAGGAGCAAAGGTACATTCCCTGCCTGGTACACCCCTGCACCCGATCACGAAACAGATTGAACAAAAATACATGATCTGTTCTATGAAAATCAGTAGTGGTTTTGGCAGATCGAATAGCATAGTAAAAATTTGTTATATAAAATTAGTGATTAGGAGACATCCTTCAGTATATGTGATTTGATGTGTGTTTTGTTCGATTGTATATTTTACCTAGAAATGTCTTAAGAATATGATTGAACAGAATGTTTGAATCTCATTCCTGAACATTTTTCTTCCATACATACCTAAATTTTGCTGATACATATAGGATAAATTAATAAAATTACTTCTACATTTTGTAATTTT

mRNA sequence

CATCCTTATCTATTTTTTGTTCATCTTCTTCCTCACAATTGCTCTCGATTTCTGCAACAAGCGATGGAATCATCCCTTCTCCGTTCTGCTTCATCTCCTTTACTTCTCGAATCCACGGATCTTCTTCGCCGGATCGGATCCGTTTCCTCTCCGAGATTTCCTTCTACCGTTGTTCGTTGTTCTTCCAGAAGCCATGCTTCTATTCCGAAGCTCGAGCCGTTTAGTCGCACGAAGCTTGATCGCGCCATCAAAGATCCGCCTCTGGTTGAGAAGTCCGAGAACGAGCTTGCAGATTACTGCTCGACATTGGATGGAGACGATTCATATAGCTGTTGGAAAGCGTATTTCGAGCTCAAAGATCTTGAAAAAGAGTCGCCTAAACAAGAAGTGGAGAAACTGATTCTTCAAGCAGGAGGCGTGAAATCGCTGATCGGACTCTTACACGGCATCGCGGGCATACACAAGAGGAAGGAAAGCGAAAACGAGGCGAAGAAGCCATTGAACCGCGTGGAAAGAAGAGTGAGAGATTGTCCAATACCAGATGGATTGCCGAAATCCGCAGAGGAAATTGAAGAAGAAGAAGGAGCGAGAATGCCGGATTCACCATTTACGAGATTGCTGAGGAGCAAAGGTACATTCCCTGCCTGGTACACCCCTGCACCCGATCACGAAACAGATTGAACAAAAATACATGATCTGTTCTATGAAAATCAGTAGTGGTTTTGGCAGATCGAATAGCATAGTAAAAATTTGTTATATAAAATTAGTGATTAGGAGACATCCTTCAGTATATGTGATTTGATGTGTGTTTTGTTCGATTGTATATTTTACCTAGAAATGTCTTAAGAATATGATTGAACAGAATGTTTGAATCTCATTCCTGAACATTTTTCTTCCATACATACCTAAATTTTGCTGATACATATAGGATAAATTAATAAAATTACTTCTACATTTTGTAATTTT

Coding sequence (CDS)

ATGGAATCATCCCTTCTCCGTTCTGCTTCATCTCCTTTACTTCTCGAATCCACGGATCTTCTTCGCCGGATCGGATCCGTTTCCTCTCCGAGATTTCCTTCTACCGTTGTTCGTTGTTCTTCCAGAAGCCATGCTTCTATTCCGAAGCTCGAGCCGTTTAGTCGCACGAAGCTTGATCGCGCCATCAAAGATCCGCCTCTGGTTGAGAAGTCCGAGAACGAGCTTGCAGATTACTGCTCGACATTGGATGGAGACGATTCATATAGCTGTTGGAAAGCGTATTTCGAGCTCAAAGATCTTGAAAAAGAGTCGCCTAAACAAGAAGTGGAGAAACTGATTCTTCAAGCAGGAGGCGTGAAATCGCTGATCGGACTCTTACACGGCATCGCGGGCATACACAAGAGGAAGGAAAGCGAAAACGAGGCGAAGAAGCCATTGAACCGCGTGGAAAGAAGAGTGAGAGATTGTCCAATACCAGATGGATTGCCGAAATCCGCAGAGGAAATTGAAGAAGAAGAAGGAGCGAGAATGCCGGATTCACCATTTACGAGATTGCTGAGGAGCAAAGGTACATTCCCTGCCTGGTACACCCCTGCACCCGATCACGAAACAGATTGA

Protein sequence

MESSLLRSASSPLLLESTDLLRRIGSVSSPRFPSTVVRCSSRSHASIPKLEPFSRTKLDRAIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVKSLIGLLHGIAGIHKRKESENEAKKPLNRVERRVRDCPIPDGLPKSAEEIEEEEGARMPDSPFTRLLRSKGTFPAWYTPAPDHETD

Homology

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BLAST of Carg23620 vs. NCBI nr
Match: XP_022943281.1 (CCG-binding protein 1 [Cucurbita moschata])

HSP 1 Score: 406.8 bits (1044), Expect = 4.5e-110
Identity = 205/205 (100.00%), Postives = 205/205 (100.00%), Query Frame = 0


Query: 1   MESSLLRSASSPLLLESTDLLRRIGSVSSPRFPSTVVRCSSRSHASIPKLEPFSRTKLDR 60
           MESSLLRSASSPLLLESTDLLRRIGSVSSPRFPSTVVRCSSRSHASIPKLEPFSRTKLDR
Sbjct: 1   MESSLLRSASSPLLLESTDLLRRIGSVSSPRFPSTVVRCSSRSHASIPKLEPFSRTKLDR 60

Query: 61  AIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK 120
           AIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK
Sbjct: 61  AIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK 120

Query: 121 SLIGLLHGIAGIHKRKESENEAKKPLNRVERRVRDCPIPDGLPKSAEEIEEEEGARMPDS 180
           SLIGLLHGIAGIHKRKESENEAKKPLNRVERRVRDCPIPDGLPKSAEEIEEEEGARMPDS
Sbjct: 121 SLIGLLHGIAGIHKRKESENEAKKPLNRVERRVRDCPIPDGLPKSAEEIEEEEGARMPDS 180

Query: 181 PFTRLLRSKGTFPAWYTPAPDHETD 206
           PFTRLLRSKGTFPAWYTPAPDHETD
Sbjct: 181 PFTRLLRSKGTFPAWYTPAPDHETD 205

[Close]

BLAST of Carg23620 vs. NCBI nr
Match: XP_023512041.1 (CCG-binding protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 402.5 bits (1033), Expect = 8.5e-109
Identity = 203/205 (99.02%), Postives = 203/205 (99.02%), Query Frame = 0


Query: 1   MESSLLRSASSPLLLESTDLLRRIGSVSSPRFPSTVVRCSSRSHASIPKLEPFSRTKLDR 60
           MESSLLRS SSPLLLESTDLLRRIGSVSSPRFPSTVVRCSSRSHASIPKLEPFSRTKLDR
Sbjct: 1   MESSLLRSVSSPLLLESTDLLRRIGSVSSPRFPSTVVRCSSRSHASIPKLEPFSRTKLDR 60

Query: 61  AIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK 120
           AIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK
Sbjct: 61  AIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK 120

Query: 121 SLIGLLHGIAGIHKRKESENEAKKPLNRVERRVRDCPIPDGLPKSAEEIEEEEGARMPDS 180
           SLIGLLHGIAGIHKRKESENEAKKPLN VERRVRDCPIPDGLPKSAEEIEEEEGARMPDS
Sbjct: 121 SLIGLLHGIAGIHKRKESENEAKKPLNGVERRVRDCPIPDGLPKSAEEIEEEEGARMPDS 180

Query: 181 PFTRLLRSKGTFPAWYTPAPDHETD 206
           PFTRLLRSKGTFPAWYTPAPDHETD
Sbjct: 181 PFTRLLRSKGTFPAWYTPAPDHETD 205

[Close]

BLAST of Carg23620 vs. NCBI nr
Match: XP_022986608.1 (CCG-binding protein 1 [Cucurbita maxima])

HSP 1 Score: 396.7 bits (1018), Expect = 4.7e-107
Identity = 199/205 (97.07%), Postives = 201/205 (98.05%), Query Frame = 0


Query: 1   MESSLLRSASSPLLLESTDLLRRIGSVSSPRFPSTVVRCSSRSHASIPKLEPFSRTKLDR 60
           MESS LRS SSPLLLESTDLLRRIGS SSPRFPSTVVRCSSRSHASIPKL+PFSRTKLDR
Sbjct: 1   MESSFLRSVSSPLLLESTDLLRRIGSASSPRFPSTVVRCSSRSHASIPKLKPFSRTKLDR 60

Query: 61  AIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK 120
           AIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK
Sbjct: 61  AIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK 120

Query: 121 SLIGLLHGIAGIHKRKESENEAKKPLNRVERRVRDCPIPDGLPKSAEEIEEEEGARMPDS 180
           SLIGLLHGIAGIHK+KESENEAKKPLN VERRVRDCPIPDGLPKSAEEIEEEEGARMPDS
Sbjct: 121 SLIGLLHGIAGIHKKKESENEAKKPLNGVERRVRDCPIPDGLPKSAEEIEEEEGARMPDS 180

Query: 181 PFTRLLRSKGTFPAWYTPAPDHETD 206
           PFTRLLRSKGTFPAWYTPAPDHETD
Sbjct: 181 PFTRLLRSKGTFPAWYTPAPDHETD 205

[Close]

BLAST of Carg23620 vs. NCBI nr
Match: XP_022148538.1 (CCG-binding protein 1 [Momordica charantia])

HSP 1 Score: 329.3 bits (843), Expect = 9.1e-87
Identity = 170/205 (82.93%), Postives = 180/205 (87.80%), Query Frame = 0


Query: 1   MESSLLRSASSPLLLESTDLLRRIGSVSSPRFPSTVVRCSSRSHASIPKLEPFSRTKLDR 60
           MES +LRS SSP LLE+TD LRR GS S     S+ VRCSSRSHA IPKLEPFSRTKLDR
Sbjct: 1   MESFILRSISSPFLLEATD-LRRTGSAS-----SSAVRCSSRSHAYIPKLEPFSRTKLDR 60

Query: 61  AIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK 120
           AIK+PPL+EKSE+ELADYCSTL+GDDSYSCWKAYFELKDLEK+SPKQEVEKLILQAGGVK
Sbjct: 61  AIKEPPLIEKSESELADYCSTLEGDDSYSCWKAYFELKDLEKDSPKQEVEKLILQAGGVK 120

Query: 121 SLIGLLHGIAGIHKRKESENEAKKPLNRVERRVRDCPIPDGLPKSAEEIEEEEGARMPDS 180
           SLIG LHGIA IHKRK SEN A KPLN  E R   CPIPDGLPKSAEE+EEEE ARMPDS
Sbjct: 121 SLIGCLHGIAAIHKRKGSENNAAKPLNGAEGRETGCPIPDGLPKSAEEMEEEERARMPDS 180

Query: 181 PFTRLLRSKGTFPAWYTPAPDHETD 206
           PFTRLLRSKGTFPAWY+PAPDHETD
Sbjct: 181 PFTRLLRSKGTFPAWYSPAPDHETD 199

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BLAST of Carg23620 vs. NCBI nr
Match: XP_008459226.1 (PREDICTED: CCG-binding protein 1 [Cucumis melo])

HSP 1 Score: 313.2 bits (801), Expect = 6.8e-82
Identity = 169/209 (80.86%), Postives = 181/209 (86.60%), Query Frame = 0


Query: 1   MESSLLRSASSPLLLESTDL-LRRIGSVSSPRFPST-VVRCSSRSHASIPKLEPFSRTKL 60
           MESSLLRS SSPLLLESTDL LRRIGS+ S RF ST VVR SS+SH+ IPKLEPFSR+KL
Sbjct: 1   MESSLLRSLSSPLLLESTDLHLRRIGSLPSSRFSSTLVVRSSSKSHSYIPKLEPFSRSKL 60

Query: 61  DRAIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGG 120
           DRAIK+PPL+EKSENELADYCSTL+GDDSYSCWKAYFELKDLEKE+PKQEVEKLILQAGG
Sbjct: 61  DRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKETPKQEVEKLILQAGG 120

Query: 121 VKSLIGLLHGIAGIHKRKESENEAKKPLNR-VE-RRVRDCPIPDGLPKSAEEIEEEEGAR 180
           VKSLIG LHGI  I K K  E E +K     VE R  ++CPIPDGLPKSAEEIEEEE  R
Sbjct: 121 VKSLIGCLHGITAIPKSKGKEKEERKAWKTGVEGRGNKECPIPDGLPKSAEEIEEEEVGR 180

Query: 181 MPDSPFTRLLRSKGTFPAWYTPAPDHETD 206
           MPDS FTRLLRSKGTFPAWY+PAPDHETD
Sbjct: 181 MPDSAFTRLLRSKGTFPAWYSPAPDHETD 209

[Close]

BLAST of Carg23620 vs. TAIR10
Match: AT2G15890.1 (maternal effect embryo arrest 14)

HSP 1 Score: 218.4 bits (555), Expect = 4.1e-57
Identity = 121/211 (57.35%), Postives = 149/211 (70.62%), Query Frame = 0


Query: 1   MESSLLRSASSPLLLESTDLLRRIGSVSSPRFPSTVVRCSSRSHASIPKLEPFSRTKLDR 60
           ++S  LRS   P+    T  + R     +  FP  VVRCSS     +PKLE FSR K DR
Sbjct: 2   IKSVTLRSFHLPIEFNDTKFVSR-PCFLARSFP--VVRCSST--RDVPKLELFSRGKFDR 61

Query: 61  AIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK 120
            ++DPPL+EK+E+EL+DYCSTL+GDDSYSCW+AYFELKDLE+E PK EVE LILQ GG+K
Sbjct: 62  ILQDPPLIEKAESELSDYCSTLEGDDSYSCWRAYFELKDLEREKPKVEVENLILQTGGLK 121

Query: 121 SLIGLLHGIAGIHKRKESENEAKKPLNRVERRVRD------CPIPDGLPKSAEEIEEEEG 180
           SLIG LHG+A +    E +N+ K  L+  E   R+        IPDGLPKS +E+EEEE 
Sbjct: 122 SLIGCLHGVASM----EKDNKTKNGLHVGEESDREKGMNLHIHIPDGLPKSEQELEEEEK 181

Query: 181 ARMPDSPFTRLLRSKGTFPAWYTPAPDHETD 206
           ++MPDS FTRLLRSKGT PAW++ APDHETD
Sbjct: 182 SKMPDSAFTRLLRSKGTIPAWFSHAPDHETD 203

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BLAST of Carg23620 vs. Swiss-Prot
Match: sp|Q9XIM0|MEE14_ARATH (CCG-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=MEE14 PE=1 SV=1)

HSP 1 Score: 218.4 bits (555), Expect = 7.4e-56
Identity = 121/211 (57.35%), Postives = 149/211 (70.62%), Query Frame = 0


Query: 1   MESSLLRSASSPLLLESTDLLRRIGSVSSPRFPSTVVRCSSRSHASIPKLEPFSRTKLDR 60
           ++S  LRS   P+    T  + R     +  FP  VVRCSS     +PKLE FSR K DR
Sbjct: 2   IKSVTLRSFHLPIEFNDTKFVSR-PCFLARSFP--VVRCSST--RDVPKLELFSRGKFDR 61

Query: 61  AIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK 120
            ++DPPL+EK+E+EL+DYCSTL+GDDSYSCW+AYFELKDLE+E PK EVE LILQ GG+K
Sbjct: 62  ILQDPPLIEKAESELSDYCSTLEGDDSYSCWRAYFELKDLEREKPKVEVENLILQTGGLK 121

Query: 121 SLIGLLHGIAGIHKRKESENEAKKPLNRVERRVRD------CPIPDGLPKSAEEIEEEEG 180
           SLIG LHG+A +    E +N+ K  L+  E   R+        IPDGLPKS +E+EEEE 
Sbjct: 122 SLIGCLHGVASM----EKDNKTKNGLHVGEESDREKGMNLHIHIPDGLPKSEQELEEEEK 181

Query: 181 ARMPDSPFTRLLRSKGTFPAWYTPAPDHETD 206
           ++MPDS FTRLLRSKGT PAW++ APDHETD
Sbjct: 182 SKMPDSAFTRLLRSKGTIPAWFSHAPDHETD 203

[Close]

BLAST of Carg23620 vs. TrEMBL
Match: tr|A0A1S3C971|A0A1S3C971_CUCME (CCG-binding protein 1 OS=Cucumis melo OX=3656 GN=LOC103498415 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 4.5e-82
Identity = 169/209 (80.86%), Postives = 181/209 (86.60%), Query Frame = 0


Query: 1   MESSLLRSASSPLLLESTDL-LRRIGSVSSPRFPST-VVRCSSRSHASIPKLEPFSRTKL 60
           MESSLLRS SSPLLLESTDL LRRIGS+ S RF ST VVR SS+SH+ IPKLEPFSR+KL
Sbjct: 1   MESSLLRSLSSPLLLESTDLHLRRIGSLPSSRFSSTLVVRSSSKSHSYIPKLEPFSRSKL 60

Query: 61  DRAIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGG 120
           DRAIK+PPL+EKSENELADYCSTL+GDDSYSCWKAYFELKDLEKE+PKQEVEKLILQAGG
Sbjct: 61  DRAIKEPPLIEKSENELADYCSTLEGDDSYSCWKAYFELKDLEKETPKQEVEKLILQAGG 120

Query: 121 VKSLIGLLHGIAGIHKRKESENEAKKPLNR-VE-RRVRDCPIPDGLPKSAEEIEEEEGAR 180
           VKSLIG LHGI  I K K  E E +K     VE R  ++CPIPDGLPKSAEEIEEEE  R
Sbjct: 121 VKSLIGCLHGITAIPKSKGKEKEERKAWKTGVEGRGNKECPIPDGLPKSAEEIEEEEVGR 180

Query: 181 MPDSPFTRLLRSKGTFPAWYTPAPDHETD 206
           MPDS FTRLLRSKGTFPAWY+PAPDHETD
Sbjct: 181 MPDSAFTRLLRSKGTFPAWYSPAPDHETD 209

[Close]

BLAST of Carg23620 vs. TrEMBL
Match: tr|A0A0A0LIJ6|A0A0A0LIJ6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237150 PE=4 SV=1)

HSP 1 Score: 307.0 bits (785), Expect = 3.2e-80
Identity = 164/209 (78.47%), Postives = 181/209 (86.60%), Query Frame = 0


Query: 1   MESSLLRSASSPLLLESTDL-LRRIGSVSSPRFPST-VVRCSSRSHASIPKLEPFSRTKL 60
           M+SSLLRS SSPLLLES DL LRRIGS+SS  F S+ VVR SS+SH+ IPKL+PFSR+KL
Sbjct: 1   MDSSLLRSLSSPLLLESPDLHLRRIGSLSSSPFSSSLVVRSSSKSHSYIPKLQPFSRSKL 60

Query: 61  DRAIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGG 120
           DRAIK+PPL++KSENELADYCSTL+GDDSYSCWKAYFEL+DLEKESPKQEVEKLILQAGG
Sbjct: 61  DRAIKEPPLIQKSENELADYCSTLEGDDSYSCWKAYFELQDLEKESPKQEVEKLILQAGG 120

Query: 121 VKSLIGLLHGIAGIHKRKESENEAKKPLNR-VE-RRVRDCPIPDGLPKSAEEIEEEEGAR 180
           VKSLIG +HGI  I K K  E E +K   + VE R  R+CPIPDGLPKSAEEIEEEE  R
Sbjct: 121 VKSLIGCVHGITAIQKSKGKEKEERKAWKKEVEGRGNRECPIPDGLPKSAEEIEEEEEGR 180

Query: 181 MPDSPFTRLLRSKGTFPAWYTPAPDHETD 206
           MPDS FTRLLRSKGTFPAWY+PAPDHETD
Sbjct: 181 MPDSAFTRLLRSKGTFPAWYSPAPDHETD 209

[Close]

BLAST of Carg23620 vs. TrEMBL
Match: tr|A0A2P5A9L3|A0A2P5A9L3_9ROSA (Maternal effect embryo arrest OS=Trema orientalis OX=63057 GN=TorRG33x02_355370 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 5.0e-73
Identity = 143/205 (69.76%), Postives = 166/205 (80.98%), Query Frame = 0


Query: 1   MESSLLRSASSPLLLESTDLLRRIGSVSSPRFPSTVVRCSSRSHASIPKLEPFSRTKLDR 60
           ++SSLLRS SSPL+LE+ DL R   S ++ RF STV  CSSRSH  IPKLEPFSRT+ DR
Sbjct: 2   IKSSLLRSCSSPLVLEAKDLHRSTPSSAATRFASTVT-CSSRSHTYIPKLEPFSRTRFDR 61

Query: 61  AIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK 120
            +KDPPL+EKSENELADYCSTL+GD+SY CW+AYFELKDLEKE+PK EVEKLILQAGGVK
Sbjct: 62  VVKDPPLIEKSENELADYCSTLEGDESYGCWRAYFELKDLEKETPKSEVEKLILQAGGVK 121

Query: 121 SLIGLLHGIAGIHKRKESENEAKKPLNRVERRVRDCPIPDGLPKSAEEIEEEEGARMPDS 180
           SLIG LHGIA IHK  +  +   +P +  E+     PIPDGLPKS  E+EEEE  +MPDS
Sbjct: 122 SLIGFLHGIAEIHKGNKKRSSLTRPFDS-EKGHTHSPIPDGLPKSQAELEEEERGKMPDS 181

Query: 181 PFTRLLRSKGTFPAWYTPAPDHETD 206
           P+TRLLR+KG FPAWY+PAPDHETD
Sbjct: 182 PYTRLLRTKGKFPAWYSPAPDHETD 204

[Close]

BLAST of Carg23620 vs. TrEMBL
Match: tr|A0A2N9EKT0|A0A2N9EKT0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7349 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 8.5e-73
Identity = 144/206 (69.90%), Postives = 169/206 (82.04%), Query Frame = 0


Query: 1   MESSLLRSAS-SPLLLESTDLLRRIGSVSSPRFPSTVVRCSSRSHASIPKLEPFSRTKLD 60
           MES+LLRS+  SPLLLE+ D +    S SS RF ST + CSSRSHA IPKLEPFSR K +
Sbjct: 1   MESALLRSSCYSPLLLEAKD-VHHTPSSSSARFASTTITCSSRSHAFIPKLEPFSRPKFE 60

Query: 61  RAIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGV 120
           R +KDPPL+EKSENEL+DYCSTL+GD+SYSCW+AYFELKDL ++SPK++VEKLILQAGG+
Sbjct: 61  RFVKDPPLIEKSENELSDYCSTLEGDNSYSCWRAYFELKDLARDSPKEDVEKLILQAGGI 120

Query: 121 KSLIGLLHGIAGIHKRKESENEAKKPLNRVERRVRDCPIPDGLPKSAEEIEEEEGARMPD 180
           KSLIG LHGIA +HK K +     KP+N  E   R CPIPDGLPKS EE+EEE+ ARMPD
Sbjct: 121 KSLIGFLHGIAAMHKGKNNGFNMAKPVNTEEG--RPCPIPDGLPKSTEELEEEDKARMPD 180

Query: 181 SPFTRLLRSKGTFPAWYTPAPDHETD 206
           S  TRLLR+KG+FPAWY+PAPDHETD
Sbjct: 181 SSHTRLLRTKGSFPAWYSPAPDHETD 203

[Close]

BLAST of Carg23620 vs. TrEMBL
Match: tr|A0A2P5C7H4|A0A2P5C7H4_PARAD (Maternal effect embryo arrest OS=Parasponia andersonii OX=3476 GN=PanWU01x14_177170 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 4.6e-71
Identity = 144/205 (70.24%), Postives = 165/205 (80.49%), Query Frame = 0


Query: 1   MESSLLRSASSPLLLESTDLLRRIGSVSSPRFPSTVVRCSSRSHASIPKLEPFSRTKLDR 60
           ++SSLLRS SSPL+LE+ DL R   S S+ RF STV  CSSRSH  IPKLEPFSRT+ DR
Sbjct: 2   IKSSLLRSCSSPLVLEAKDLHRSTPS-SATRFASTVT-CSSRSHTYIPKLEPFSRTRFDR 61

Query: 61  AIKDPPLVEKSENELADYCSTLDGDDSYSCWKAYFELKDLEKESPKQEVEKLILQAGGVK 120
            +KDPPL+EKSENELADYCSTL+GD+SYSCW+AYFELKDLEKE+ K EVEKLILQAGGVK
Sbjct: 62  VVKDPPLIEKSENELADYCSTLEGDESYSCWRAYFELKDLEKETSKAEVEKLILQAGGVK 121

Query: 121 SLIGLLHGIAGIHKRKESENEAKKPLNRVERRVRDCPIPDGLPKSAEEIEEEEGARMPDS 180
           SLIG LHGIA IHK  +  +   +P    E+     PIPDGLPKS  E+EEEE  +MPDS
Sbjct: 122 SLIGFLHGIAEIHKGNKKRSSLTRPFES-EKGHSLSPIPDGLPKSQAELEEEERGKMPDS 181

Query: 181 PFTRLLRSKGTFPAWYTPAPDHETD 206
           P+TRLLR+KG FPAWY+PAPDHETD
Sbjct: 182 PYTRLLRTKGKFPAWYSPAPDHETD 203

The following BLAST results are available for this feature:

BLAST of Carg23620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943281.1	4.5e-110	100.00	CCG-binding protein 1 [Cucurbita moschata]	[more]
XP_023512041.1	8.5e-109	99.02	CCG-binding protein 1 [Cucurbita pepo subsp. pepo]	[more]
XP_022986608.1	4.7e-107	97.07	CCG-binding protein 1 [Cucurbita maxima]	[more]
XP_022148538.1	9.1e-87	82.93	CCG-binding protein 1 [Momordica charantia]	[more]
XP_008459226.1	6.8e-82	80.86	PREDICTED: CCG-binding protein 1 [Cucumis melo]	[more]

BLAST of Carg23620 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G15890.1	4.1e-57	57.35	maternal effect embryo arrest 14	[more]

BLAST of Carg23620 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9XIM0\|MEE14_ARATH	7.4e-56	57.35	CCG-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=MEE14 PE=1 SV=1	[more]

BLAST of Carg23620 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C971\|A0A1S3C971_CUCME	4.5e-82	80.86	CCG-binding protein 1 OS=Cucumis melo OX=3656 GN=LOC103498415 PE=4 SV=1	[more]
tr\|A0A0A0LIJ6\|A0A0A0LIJ6_CUCSA	3.2e-80	78.47	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G237150 PE=4 SV=1	[more]
tr\|A0A2P5A9L3\|A0A2P5A9L3_9ROSA	5.0e-73	69.76	Maternal effect embryo arrest OS=Trema orientalis OX=63057 GN=TorRG33x02_355370 ...	[more]
tr\|A0A2N9EKT0\|A0A2N9EKT0_FAGSY	8.5e-73	69.90	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS7349 PE=4 SV=1	[more]
tr\|A0A2P5C7H4\|A0A2P5C7H4_PARAD	4.6e-71	70.24	Maternal effect embryo arrest OS=Parasponia andersonii OX=3476 GN=PanWU01x14_177...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0010183	pollen tube guidance

Vocabulary: **Molecular Function**
Term	Definition
GO:0036033	mediator complex binding

Vocabulary: **INTERPRO**
Term	Definition
IPR037502	CBP1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010183	pollen tube guidance
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0036033	mediator complex binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23620-RA	Carg23620-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 151..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 164..178
IPR037502	CCG-binding protein 1	PANTHER	PTHR36345	FAMILY NOT NAMED	coord: 1..205

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23620	Cla010275	Watermelon (97103) v1	carwmB0794
Carg23620	Csa2G237150	Cucumber (Chinese Long) v2	carcuB0812
Carg23620	MELO3C021923	Melon (DHL92) v3.5.1	carmeB0794
Carg23620	ClCG09G017640	Watermelon (Charleston Gray)	carwcgB0769
Carg23620	CSPI02G11760	Wild cucumber (PI 183967)	carcpiB0831
Carg23620	Cucsa.110030	Cucumber (Gy14) v1	carcgyB0907
Carg23620	CmaCh20G008860	Cucurbita maxima (Rimu)	carcmaB1104
Carg23620	CmoCh20G008930	Cucurbita moschata (Rifu)	carcmoB1073
Carg23620	Lsi10G003190	Bottle gourd (USVL1VR-Ls)	carlsiB731
Carg23620	Cp4.1LG16g02080	Cucurbita pepo (Zucchini)	carcpeB1113
Carg23620	CsGy2G011780	Cucumber (Gy14) v2	carcgybB0786
Carg23620	MELO3C021923.2	Melon (DHL92) v3.6.1	carmedB0806
Carg23620	CsaV3_2G014240	Cucumber (Chinese Long) v3	carcucB0835
Carg23620	Cla97C09G179040	Watermelon (97103) v2	carwmbB0833

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23620	Wax gourd	carwgoB0930
Carg23620	Wax gourd	carwgoB0931
Carg23620	Silver-seed gourd	carcarB619
Carg23620	Cucurbita maxima (Rimu)	carcmaB1105
Carg23620	Cucurbita moschata (Rifu)	carcmoB1074
Carg23620	Cucurbita pepo (Zucchini)	carcpeB1114