Carg23591 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23591
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Shikimate kinase
Location	Cucurbita_argyrosperma_scaffold_235 : 198608 .. 206633 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGACTCCGGCTACCATGTGCCGATCGCGCCTCCTGTAATCTCCTTATCCATTTTCTTGGCGCGAAGCTCTAATGGCTTCGGCGAGCTTTACCAGCGCTCTGTGTTTCTTTTCCCAAAACCCTATAAGAAACCTCGAGGTCTCCTCCTCTCCGATCTTCTATTCTAGCTCCAATGGCGTTGAATTCGCTTCCAATTCCATCGGTCTTACTTCCTGCACCGGCCTCTCTCCTGCAACTTCTCGTCTCAGTTCCCGTTTCATTCGTAACTGCTCCTCCAGCACCGCTCCAGTTCGCACTTTGGATTACGAGGTACTTCTTCTTCTGCGATGTTTTTTTGTTTAGTTTGTGGAGAAATTGGAACTCTGAATTGTATGTCGCTTCTTTTATTTTGTTGAATCTCTTTGTAGTTTAGTCTGTACTAGCTGCGTTCATGATTTTTGGAAGTATTTCTTGGATAAACTTTCGCATTTCCTTCCAAAAGTGGTAAGGATTGTATCTGGACTGACTATTGTTAGAATGTGCTTCTCTCTTCCACTCGTTATCTCTAGAACGGTGTATTTGATTAACATTCGTTGAACTAGAGGTTACAGAGCTGAAGTTTTGTATGCAAATGCCTTGTTGAAGCTGTGGTGAAATTTTGAGTGCTGTGTTTATGTGTTGTCTTTGTAAGACATGTAAATAGTTTATTAGCAATGAATAATCAATCCATTTGCATTAGTTTATTGCACATAACGTTTGAAACAAATTGGTTTATGTATCTCGTAATTATCATAACTCACTAGAATAGCATAAGAAATGGCAGGAAACATTATAATAATTGCTAAGGTAGCATGTGTTGTGGCCATTAGATGACGAGTTCTAACATCATATAAGCATTTGCACTTTATATTTCATGCATTCATCCAATAAGGATGATTTTCTTCGTTCCCCAGTCTCTTACCCCCCCTATTTACTGGATGAAATTTCATGCAGTTCACCGATGGTTCTTCTGAAGTGGAACTGAGGTTACAACTTGAGACTCAAGACATTCGAAGTTCAAAAGATGTTTTTGTGGATGCAAATGAAACCTCTTTGACTATCAGAGTACGACGCTTGGGATCTATTGTTACTCTTCTGGAAACAAAACAACTATTTGAGAAGATTAAACCTGCAGAAACAATATGGTTTGTCGTTGTCATTGTAGATAGCCTACTACATCCAGTATGAATTTCAATTTCTGAATATGACATTGCTTATGTTGAACAGGTATATTGATGAAGATCAACTAGTTATAAGCTTAAAGAAGCATGATCCAGACTTGAAATGGCCCGACATTGTAGAGTCTTGGGAATCCCTAACAGCAGGATTTACACAGCTTCTAAAGGGAACATCTATATATTTGATAGGGGATTCGACTGATATTAACCAAAAAGTTGCTCATGAACTCGCGGTTGGACTTGGGTATGGTGTTTACTCTATCTTGGGTCATTTTAATTTTCCAATGGTCTAAGTTGATAATGGTTGTCACATAAATTGCTAGTTTATTTGAAACGACTGATTGTTTGTAATGTTCATCAACTGAATTGTGGCCTTGTAACATGACAACTTAAACAAGGTAAATATTTTATCTCCAGATAGTACATACTTCATCAGTTATCATAGGTAAGAACAACGTTAACTCCCATTTTTCAATTATTAACATCAAAGACTTTGAGAAATTTATGCCCTCTTGGTGTTTTGAAAAGCCCACTTAACCGTGTGCCTAGGCCCATGGCATGCCTCAATGCTCAATGCCTACTAAGGAAAGTTTAAAGTTTAAATTAATACAACTATTAGTTTGAGGCTTATATAACCTCAAAGTTTTGGGGCATAAATTTATTTCCCTCCAAAAAAAGTCTCAACTCGGAGGAAGAAATCTATTAATATTCTTAAAATGTCTTTGTTTGTTACCCTATAATCTCAAATAAAAACTATGCTTTCTCGCGTTATTATTTGTCATACAATATTTCTTCATACACAAATAAATTATTTACATATTTCTTTTGTGCATTCATAAAAGCCCACACTTTTTTTCGCCTCGTACTTGAGCCATGGAGGGCTATTGTGCTCTAGTGTGCCCAAGGCTTTAAAAAACACTACCCCTCTCTACAATTGTTCCTGCTAATTTTGTCAAACTTTCATCTGAGAAATTTTATTGGCATCATTCTTAGGTATACTCCACTGAGTACAAAAGAATTGCTGGAAACGTTTTCCAAGCAGAACATTGATTCATGTAAGTACTATTTACTCTAGCCCTGCTTCGATGTCACTAATTACCGTTAGGGTTGTTGAGAATTGTTGGGATGGAGTCCCACATTGGCTAGTTTAGGGAATGATCATGGGTTTATAAGCAAGGAATAGTATCTCCATTGATACTGAGCCTTTTGGGGAAACCCAAAACAAAACCACGAGAGCTTATGCTCAAAGTGGAAAATATCATACTATTGTGGAGATCTGTGATTACTAACATGGTATTAGAGTCATGCCCTAAACTTAACCATGTCAATAAAATCCTCAAATCTCGAACAAAGTATTGTGAGCCTCGAAGGTATAGTCAAAAGTGACTAAAGTGTCGAACAAAGGGTGTACTTTGTTCAAAGACTCCAAAAAAGGAGTCGAGTCTCGATTAAGGGGAGGCTACTCGAGGGCTCCATAGGCCTCAGGGGAGGCTCTATAGTCTACTTTGTTTGAGGGGAGGATTGTTGAGGATTGTTGAGGATTGTTGGGATGGAGTCCGACATTGGCTAATTTAAGGAATGATCATGGGTTTATAAGCAAAAAATAGTATTTCCATTGGTATGAGGCCTTTTGGGAAGCCCAAAGCAAAGGCATGAGAGCTTATGCTCAAAGTGGACAATATCATACCATTGTGGAGATCCGTGATTACTAACCAGGGTCTTTTAAACTTCTATCCCTTTTCACCATAAACACGGAGTTTTTCTAGAGAGAAAAATGGATTTCCTTGACTACTAAAAATTTAATAATTTGGTCTATACTGATTCTGAGGTCAGAATATTATGTACCTGTTTCTTTATTTCTCATCTTTTAGAAAAGTGCAGAATGGAAGGCCCTCACCAAAAAAGAGGACTACCAAGCCAAAAGGGAAGCACAGAAACTTGCTCAAAAAGATCCTAATTTTTGGTAACAAAAAAGTAGTGGGTAATCACAAAATAAATGTGAATTAGGAGTAGTCTAGAAGGAAGCGCTAAATGCACTACCTCCTCATGCAATTCTTCTTCTTGATTTGAGGACTCAAAACTACTTCTGTCATCTCATTGAACTAGAAAAAAACAAAAACTTTACCCCAAGAAATTCCATTTTATGGATGTGGAAAGGCCCACGAAATATGATTCATATCCTCTGCCATGCTCTTACACACCAGTTACGACCAAAGACAAAAGAATAGCTTTAGTATTGATTCTTCTGAGGGCTGCAAGCCAGCAAAGAGCTGCATATTCTCTAAAAATTTCAACTTCCACTGAGTAAAGAAGAAAGATTGTGTGTGAGAAGAAACCGAAAAGACACCAATCATAACAAAGCAGAAATAAAGCGAAAAACTTAGAAATTCTCAGTTGCAGGGGTCGGCCTTGGGGCCTCCCACTGTCGAACATCCATGGTGATTGCCATCATTCTTGTTTCTTCAGATAGCATTCTTTTTGAAGCTTTCTGCCTCCCCCTTTACCATCCCAACTCCATTTGGCGTTGGAAATTTCATGACTTGGCGGTAAGCTGATGAAATGGCCTTTAATTCGTGTAGCGTTGGTCTCCCTAAGATTGCATTGTAAGCTAAAGAACAATCCACCACAAGGAAGTTCACCATCTTCCCTACTGGCTTGGAGTTTTCCCCAAAGGTCATGGGAAGTTCAATGTTGCCTTTAGAATTGATACGATTGTGCTCCCGATAAAGTCATTGAAGATGATGATTAAGTTAAGTGGGGGAGAGTGTCACAACCTCACTAAGAGAAAGTTGGGTGTGACCCCCACACACAAGATAGACAAGAGGCGACTCTCAAGTGGCGCCCATTCGGCCACATGAGGGTCAAAATTGAGAAGTGTCATGATGCGACTGAGGAGGACGGTGGTGTGCATTAAAGCTAAGTCGAGACATACGCAAGGTTCGAGAAAACAAGGAGACACGAGTGTCGAAGACAAGCTCGAAGAGAGCTTGGTAGGACCTCGGGCCATAACCTCAGAAGTCGAGGTTTCGATATGAGTTTTGGCACGCGACTTGGGAATTAAGTCCGTCTATATGAAAGATGAAAGCTCACCAGACCTTCTCACCTCCAAATTTGAGAAGGGTTGGACAGCTCCTTAGTTGCTTTCTTCCATGGTTCATTGCATTAAATGTTGTCAAAGATAGGACATCAGTTGAACTTCCTCCATTGACCAAAATATGATGGACTTTTCGATTGGCGATGGTTAAAGCTACCACCAAGGCATTATGAGATGGATGGAGGGCCTCACCTCTCTAAACTCGATATTTTGGGTCGCGCTCTGCACGTGGGCTGAGTACACTCCATTGCCCTCAGGTGCAAAGCTAGACTCGTGTGACCCAACCCAACACCTTTCAGAACCTTGAGCAAGACCGTGCAATTAACCCAAAAATAAACCTAGCCAAGTGTGTTGATGCGCTGATCCTGACCTTAGATACTTGTAGGGAAGTCTCTTATACTGCGGTAGTAAGGGTACTACTCTCATTAATTGATTTTCACATCAACATTTTTTTTAGTGGTGTGAAGTTTAGCTACAATAAATGTAGTTTTATGAAAGGGAAATTTCTAGTGTGAGCATAGCGGGTACTATGAGAGTATTAGAAAATTTTCTGTTACTCAAGTTTAGTTTCAACAAATTCTAGATAGATGTTTGTTTTTGCCTCAAGACTTGCGAGACTCGCCCATACTCCAAGCTCACTCTTTAAAACAAATAATAATAGAAAGAAAGAAACTCAGTTCATTCCTTAAGGAGGCAAGGAACTTACATAACCTCGATCCGACCAATTTGAATTTTTTCAATATTTTCCATGAGGGTGTTCCCTGCGTGGATTTCTCATCTTTGGATGCAGAGGTAGACATTGAAAGATACTCCAACAATTGTGTGAGTACTAACAAGTTCCACATTTGCGAGGGAAGGGAGAAATCCACGGATTATGATTTATAAGTGAGGACAATTATCTCTAATCGTACGGGGCCTTTTGCATGATTATATTATACCATTATAAAGATACGTGGAGGATTTGTTATTCTTATCCAATTATTTTCAAATCTACAACTTGGATTCTTTAGAAAATTGGTGTCGCCAAAGAAACAAGGGGAAATTCTCTCCAAGGAGTCTAAACTCAATATTACAATCCAATGTTAATGAATACAAGAGAGCAATTCTCTATTTATATTTATAGTGAATTGGAACAAACTAAAAATTTAAAACACAAAACTAGAAACTAAAAGGATGTATCCAAGAATTAACCCAAACTACTAAGGTTAACTAACTATCCTCGCATGCATATTTACAATAGGAGGCTTAACATCAGGCTCCTATGATTTACCATTTACCTCAAGATTTGATAGTGCCAACTCAGACAGAAGCAAAATTGCGTTACATGCTTGAAATGACTTTTATCCCCGATTTTGCAGTGTGTTAATGACTAATCAATTCCAGGGATGCTTGCCGAAGGCTCTGAAGCTGTAGCACAAGCAGAAAACGCTGTATTAGAAAGTTTAAGCAGGTATATCCAAAACTTGTTCATCCTTTTAGCATTTGATTGATTAATAGAATTGGAGAATATATGTTCTCTTTCCTGTTGATTACGCAGCCATGTACGTACTGTTGTCGCAACGCTAGGTGGTCGACCGGGAGCAGCCAGAAGAACTGATACTTGGAGACATCTTTATGCTGGATTCACTATCTGGCTTTCACAAACTGAGGCTACGGGTAACTTCTTCCATACATCGTCTCTGTTCTATTTAGTTCCAAAAGAAATAGAAAAAGACAGAAGAGAAGCATTTATCATCTGTATGGGATTAAATTAAGCATCTACTTTCTTTGTCCTGTGGATTTCTTTCACTCGATAAAGCTGTTTTTCAGAACCTGAATCTCAGTTGATTTTACCTCATTCACCCTTGTCATATCATTAATTTTTTAGGCTTTATCGGTAAATAAGTGTCAAGCCAGTATGAAACAGGAGAGCCCCTTCCGGGCAAGGTTCCTTAGGCTCTGTTTTTCCTTTAATATTGAGGGGTTGGAAGAATCCCGCATCATCGCAACTTTTCTAAGCTTGGTTCTTTAAATGCAGATGAAAGTGCAGCTAAGGAAGAAGCTAGGAGACATATGCAAGACAGTAAGGTAGCATACTCAAACGCAGAAGTTGTAGTTAAACTTCAGGGTTGGGATGATGCTCATTCCAAAGCAGTGGCTCAGGCAGCATTAAGTGCCCTTAAGCAACTTGTTCTGTCGGACAAAAACCTTCCAGGTATACTTTGTTTCACCCAATCTCGAATTCTAGTGTGTTTGGAATAACTTGCATAAAAATTGTTTTTTTGAACAAAATCAATCCTTATATAAACTATGGAGTATTTCTAATTTAAAGTATGTTTAGCATACATTCATCGGGTATGTTTGGAACACCTTCTAGATTAAACACTTCTGAAAAAATATTTTTAACAAAAAAAAAGTAATTAAACATCTATCAATGATTTTAAATTATCAAACGTATGTTTTATAAATAAAAAAAAAACTTATAAAACATATATTTTATTTATTAAGTTTTTCGCCATTTCATACCCACTACATCTCACACAGAAACATTGTTAGGATCACACAACAACGCACACACTCGATCTAGATGAACGCAAAGAACAAGATAGAGAAAATGTAAGGAGAATATTGGCTAAAGGTTTTGTATTGATGACTACCGATATATATTGAGGGATATATATACGGTTTAGCTTACCATATATTGCTTATGTAACCATCTACTATATATAAATATCTACGATATATAGCTTTACATTGCTTATTTCTTATTCTTGCTGCATGTTGAGATAAAATTAGGAGAATGTTGATGCATATGCATATACATGTCTATATATACACACACATAATTCAGACGGCATTACTGATAGATAGGAGACTAATATCAGATCTGATGCCATTGAATTATGATCCATACGAATCTCACGATTGTCGATATGTTATCATACTGACATGTAATATGAATCTCACGATTGTCGATATGGAGTTCTTTGTTTAGCTTGAACTTTGAGGTGTTTGTTATGACTCAAAAAACACTCGAACAACAAGAATAAGTATTTATTGAAAATATTAGTAGGATATCATTTAAGACTATATTACTTAGCATGGTGGTCTTGGTTATAAATAAAGGGATATTGTTTTATTGTAAGACATTACTATCTTAGTGTTACTTCGGCTTTTTTTTTTTTTTTTTGTGTTAGGGTACCTAATAGAATGCTTAGCCACAGCTTTGCTGAGGCAGCCTAGGAATAGTTCGTCATCATGTTTCCAGATTTGCAATTTATTTCGATCTTTGATTTGTTCGTACATTAATACACTAAAGATCGAAACATCGAGGCTGTTGATTTTCTTTGCAGTTTGAATAATTAGAGTTCATGTGGTTCGTTTATATTTCGACCGATTGAGCGATTTCCTCTGCTATGTTATTGTAGATAAGAAAAGTCTTTACATCCGATTGGGATGTCGTGGTGACTGGCCAAACATCAAACCTCCTGGTTGGGATCCTGCTTCTGATGAAGACACAAAGAACACCAGTGCCTGAAACAGAGGCTTTGCGGCTCTTTATTTCCACATTAAGCTTTCAATTAACAAATTTTCTGGTGATTTCACTCCTCCACCCTCAATTGTACCTTTGAAAAAAAAAAAAAAGGGTTCGTTAAATGTGATTTTTTTTTTCTTTTTTTTTTTAAAAAAAAGAAATATATGTAATATTATTCATTAGGTGGAATCAAATTATGAACTTGCCCTTTTTTCATATT

mRNA sequence

AAAAGACTCCGGCTACCATGTGCCGATCGCGCCTCCTGTAATCTCCTTATCCATTTTCTTGGCGCGAAGCTCTAATGGCTTCGGCGAGCTTTACCAGCGCTCTGTGTTTCTTTTCCCAAAACCCTATAAGAAACCTCGAGGTCTCCTCCTCTCCGATCTTCTATTCTAGCTCCAATGGCGTTGAATTCGCTTCCAATTCCATCGGTCTTACTTCCTGCACCGGCCTCTCTCCTGCAACTTCTCGTCTCAGTTCCCGTTTCATTCGTAACTGCTCCTCCAGCACCGCTCCAGTTCGCACTTTGGATTACGAGTTCACCGATGGTTCTTCTGAAGTGGAACTGAGGTTACAACTTGAGACTCAAGACATTCGAAGTTCAAAAGATGTTTTTGTGGATGCAAATGAAACCTCTTTGACTATCAGAGTACGACGCTTGGGATCTATTGTTACTCTTCTGGAAACAAAACAACTATTTGAGAAGATTAAACCTGCAGAAACAATATGGTATATTGATGAAGATCAACTAGTTATAAGCTTAAAGAAGCATGATCCAGACTTGAAATGGCCCGACATTGTAGAGTCTTGGGAATCCCTAACAGCAGGATTTACACAGCTTCTAAAGGGAACATCTATATATTTGATAGGGGATTCGACTGATATTAACCAAAAAGTTGCTCATGAACTCGCGGTATACTCCACTGAGTACAAAAGAATTGCTGGAAACGCTCCTATGATTTACCATTTACCTCAAGATTTGATAGTGCCAACTCAGACAGAAGCAAAATTGCGGATGCTTGCCGAAGGCTCTGAAGCTGTAGCACAAGCAGAAAACGCTGTATTAGAAAGTTTAAGCAGCCATGTACGTACTGTTGTCGCAACGCTAGGTGGTCGACCGGGAGCAGCCAGAAGAACTGATACTTGGAGACATCTTTATGCTGGATTCACTATCTGGCTTTCACAAACTGAGGCTACGGATGAAAGTGCAGCTAAGGAAGAAGCTAGGAGACATATGCAAGACAGTAAGGTAGCATACTCAAACGCAGAAGTTGTAGTTAAACTTCAGGGTTGGGATGATGCTCATTCCAAAGCAGTGGCTCAGGCAGCATTAAGTGCCCTTAAGCAACTTGTTCTGTCGGACAAAAACCTTCCAGATAAGAAAAGTCTTTACATCCGATTGGGATGTCGTGGTGACTGGCCAAACATCAAACCTCCTGGTTGGGATCCTGCTTCTGATGAAGACACAAAGAACACCAGTGCCTGAAACAGAGGCTTTGCGGCTCTTTATTTCCACATTAAGCTTTCAATTAACAAATTTTCTGGTGATTTCACTCCTCCACCCTCAATTGTACCTTTGAAAAAAAAAAAAAAGGGTTCGTTAAATGTGATTTTTTTTTTCTTTTTTTTTTTAAAAAAAAGAAATATATGTAATATTATTCATTAGGTGGAATCAAATTATGAACTTGCCCTTTTTTCATATT

Coding sequence (CDS)

ATGGCTTCGGCGAGCTTTACCAGCGCTCTGTGTTTCTTTTCCCAAAACCCTATAAGAAACCTCGAGGTCTCCTCCTCTCCGATCTTCTATTCTAGCTCCAATGGCGTTGAATTCGCTTCCAATTCCATCGGTCTTACTTCCTGCACCGGCCTCTCTCCTGCAACTTCTCGTCTCAGTTCCCGTTTCATTCGTAACTGCTCCTCCAGCACCGCTCCAGTTCGCACTTTGGATTACGAGTTCACCGATGGTTCTTCTGAAGTGGAACTGAGGTTACAACTTGAGACTCAAGACATTCGAAGTTCAAAAGATGTTTTTGTGGATGCAAATGAAACCTCTTTGACTATCAGAGTACGACGCTTGGGATCTATTGTTACTCTTCTGGAAACAAAACAACTATTTGAGAAGATTAAACCTGCAGAAACAATATGGTATATTGATGAAGATCAACTAGTTATAAGCTTAAAGAAGCATGATCCAGACTTGAAATGGCCCGACATTGTAGAGTCTTGGGAATCCCTAACAGCAGGATTTACACAGCTTCTAAAGGGAACATCTATATATTTGATAGGGGATTCGACTGATATTAACCAAAAAGTTGCTCATGAACTCGCGGTATACTCCACTGAGTACAAAAGAATTGCTGGAAACGCTCCTATGATTTACCATTTACCTCAAGATTTGATAGTGCCAACTCAGACAGAAGCAAAATTGCGGATGCTTGCCGAAGGCTCTGAAGCTGTAGCACAAGCAGAAAACGCTGTATTAGAAAGTTTAAGCAGCCATGTACGTACTGTTGTCGCAACGCTAGGTGGTCGACCGGGAGCAGCCAGAAGAACTGATACTTGGAGACATCTTTATGCTGGATTCACTATCTGGCTTTCACAAACTGAGGCTACGGATGAAAGTGCAGCTAAGGAAGAAGCTAGGAGACATATGCAAGACAGTAAGGTAGCATACTCAAACGCAGAAGTTGTAGTTAAACTTCAGGGTTGGGATGATGCTCATTCCAAAGCAGTGGCTCAGGCAGCATTAAGTGCCCTTAAGCAACTTGTTCTGTCGGACAAAAACCTTCCAGATAAGAAAAGTCTTTACATCCGATTGGGATGTCGTGGTGACTGGCCAAACATCAAACCTCCTGGTTGGGATCCTGCTTCTGATGAAGACACAAAGAACACCAGTGCCTGA

Protein sequence

MASASFTSALCFFSQNPIRNLEVSSSPIFYSSSNGVEFASNSIGLTSCTGLSPATSRLSSRFIRNCSSSTAPVRTLDYEFTDGSSEVELRLQLETQDIRSSKDVFVDANETSLTIRVRRLGSIVTLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGFTQLLKGTSIYLIGDSTDINQKVAHELAVYSTEYKRIAGNAPMIYHLPQDLIVPTQTEAKLRMLAEGSEAVAQAENAVLESLSSHVRTVVATLGGRPGAARRTDTWRHLYAGFTIWLSQTEATDESAAKEEARRHMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQLVLSDKNLPDKKSLYIRLGCRGDWPNIKPPGWDPASDEDTKNTSA

Homology

[Close]

BLAST of Carg23591 vs. NCBI nr
Match: XP_023553268.1 (probable inactive shikimate kinase like 2, chloroplastic isoform X1 [Cucurbita pepo subsp. pepo] >XP_023553269.1 probable inactive shikimate kinase like 2, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 667.2 bits (1720), Expect = 3.5e-188
Identity = 354/394 (89.85%), Postives = 362/394 (91.88%), Query Frame = 0


Query: 1   MASASFTSALCFFSQNPIRNLEVSSSPIFYSSSNGVEFASNSIGLTSCTGLSPATSRLSS 60
           MASASFTSALCFFSQNPIRNLEVSSSPIFYSSSNGVEFASNSIGLTSCTGLSPATSR SS
Sbjct: 1   MASASFTSALCFFSQNPIRNLEVSSSPIFYSSSNGVEFASNSIGLTSCTGLSPATSRFSS 60

Query: 61  RFIRNCSSSTAPVRTLDYEFTDGSSEVELRLQLETQDIRSSKDVFVDANETSLTIRVRRL 120
           RF RNCSSSTAPVRTLDYEFTDGSSEVELRLQLETQDIRSSKD FVDANETSLTIRVRRL
Sbjct: 61  RFTRNCSSSTAPVRTLDYEFTDGSSEVELRLQLETQDIRSSKDAFVDANETSLTIRVRRL 120

Query: 121 GSIVTLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGFTQL 180
           GSIVTLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAG TQL
Sbjct: 121 GSIVTLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQL 180

Query: 181 LKGTSIYLIGDSTDINQKVAHELAVYSTEYKRIAGNAPMIYHLPQDLIVPTQTEAKLRML 240
           LKGTSIYLIGDSTDINQKVAHELAV         G  P+     + L   ++      ML
Sbjct: 181 LKGTSIYLIGDSTDINQKVAHELAVG-------LGYTPL--STKELLETFSKQNIDSWML 240

Query: 241 AEGSEAVAQAENAVLESLSSHVRTVVATLGGRPGAARRTDTWRHLYAGFTIWLSQTEATD 300
           AEGS+AVAQAENAVLESLSSHVRTVVATLGGRPGAA RTDTWRHLYAGFT+WLSQTEATD
Sbjct: 241 AEGSDAVAQAENAVLESLSSHVRTVVATLGGRPGAAGRTDTWRHLYAGFTVWLSQTEATD 300

Query: 301 ESAAKEEARRHMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQLVLSDKNLPDK 360
           ESAAKEEARRHMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQL+LSDKNLPDK
Sbjct: 301 ESAAKEEARRHMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQLILSDKNLPDK 360

Query: 361 KSLYIRLGCRGDWPNIKPPGWDPASDEDTKNTSA 395
           KSLYIRLGCRGDWPNIKPPGWDPASDE+TK TSA
Sbjct: 361 KSLYIRLGCRGDWPNIKPPGWDPASDENTKKTSA 385

[Close]

BLAST of Carg23591 vs. NCBI nr
Match: XP_022923578.1 (probable inactive shikimate kinase like 2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 663.3 bits (1710), Expect = 5.1e-187
Identity = 354/394 (89.85%), Postives = 362/394 (91.88%), Query Frame = 0


Query: 1   MASASFTSALCFFSQNPIRNLEVSSSPIFYSSSNGVEFASNSIGLTSCTGLSPATSRLSS 60
           MASASFTSALCFFSQNPIRNLEVSSSPIFYSSSNGVEFASNSI LTSCTGLSPATSRLSS
Sbjct: 1   MASASFTSALCFFSQNPIRNLEVSSSPIFYSSSNGVEFASNSIVLTSCTGLSPATSRLSS 60

Query: 61  RFIRNCSSSTAPVRTLDYEFTDGSSEVELRLQLETQDIRSSKDVFVDANETSLTIRVRRL 120
           RFIRNCSSSTAPVRTLDYEFTDGSSEVELRLQLETQDIRSSKDVFVDANETSLTIRVRRL
Sbjct: 61  RFIRNCSSSTAPVRTLDYEFTDGSSEVELRLQLETQDIRSSKDVFVDANETSLTIRVRRL 120

Query: 121 GSIVTLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGFTQL 180
           GSIVTLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAG TQL
Sbjct: 121 GSIVTLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQL 180

Query: 181 LKGTSIYLIGDSTDINQKVAHELAVYSTEYKRIAGNAPMIYHLPQDLIVPTQTEAKLRML 240
           LKGTSIYLIGD+TDINQ VAHELAV         G  P+     + L   ++      ML
Sbjct: 181 LKGTSIYLIGDATDINQTVAHELAVG-------LGYTPL--STKELLETFSKQNIDSWML 240

Query: 241 AEGSEAVAQAENAVLESLSSHVRTVVATLGGRPGAARRTDTWRHLYAGFTIWLSQTEATD 300
           AEGS+AVAQAENAVLESLSSHVRTVVATLGGR GAA RTDTWRHLYAGFT+WLSQTEATD
Sbjct: 241 AEGSDAVAQAENAVLESLSSHVRTVVATLGGRQGAAGRTDTWRHLYAGFTVWLSQTEATD 300

Query: 301 ESAAKEEARRHMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQLVLSDKNLPDK 360
           ESAAKEEARRHMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQLVLSDKNLPDK
Sbjct: 301 ESAAKEEARRHMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQLVLSDKNLPDK 360

Query: 361 KSLYIRLGCRGDWPNIKPPGWDPASDEDTKNTSA 395
           KSLYIRLGCRGDWPNIKPPGWDPASDE+TKNT A
Sbjct: 361 KSLYIRLGCRGDWPNIKPPGWDPASDENTKNTGA 385

[Close]

BLAST of Carg23591 vs. NCBI nr
Match: XP_022965359.1 (probable inactive shikimate kinase like 2, chloroplastic [Cucurbita maxima])

HSP 1 Score: 660.6 bits (1703), Expect = 3.3e-186
Identity = 353/394 (89.59%), Postives = 362/394 (91.88%), Query Frame = 0


Query: 1   MASASFTSALCFFSQNPIRNLEVSSSPIFYSSSNGVEFASNSIGLTSCTGLSPATSRLSS 60
           MASASFTSALCFFSQN IRNLEV SSPIFYSSSNGVEFASNSIGLTSCTGL PATSRLSS
Sbjct: 1   MASASFTSALCFFSQNTIRNLEV-SSPIFYSSSNGVEFASNSIGLTSCTGLPPATSRLSS 60

Query: 61  RFIRNCSSSTAPVRTLDYEFTDGSSEVELRLQLETQDIRSSKDVFVDANETSLTIRVRRL 120
           RF RNCSSSTAPVRTLDYEFTDGSSEVELRLQLETQDIRSSKDVFVDANETSLTIRVRRL
Sbjct: 61  RFTRNCSSSTAPVRTLDYEFTDGSSEVELRLQLETQDIRSSKDVFVDANETSLTIRVRRL 120

Query: 121 GSIVTLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGFTQL 180
           GSIVTLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAG TQL
Sbjct: 121 GSIVTLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGSTQL 180

Query: 181 LKGTSIYLIGDSTDINQKVAHELAVYSTEYKRIAGNAPMIYHLPQDLIVPTQTEAKLRML 240
           LKGTSIYLIGD+TDINQKVAHELAV         G  P+     + L   ++      ML
Sbjct: 181 LKGTSIYLIGDATDINQKVAHELAVG-------LGYTPL--STKELLETFSKQNIDSWML 240

Query: 241 AEGSEAVAQAENAVLESLSSHVRTVVATLGGRPGAARRTDTWRHLYAGFTIWLSQTEATD 300
           AEGS+AVAQAENAVLESLSSHVRTVVATLGGRPGAA RTDTWRHLYAGFT+WLSQTEATD
Sbjct: 241 AEGSDAVAQAENAVLESLSSHVRTVVATLGGRPGAAGRTDTWRHLYAGFTVWLSQTEATD 300

Query: 301 ESAAKEEARRHMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQLVLSDKNLPDK 360
           ESAAKEEARRHMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQL+LSDKNLPDK
Sbjct: 301 ESAAKEEARRHMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQLILSDKNLPDK 360

Query: 361 KSLYIRLGCRGDWPNIKPPGWDPASDEDTKNTSA 395
           KSLYIRLGCRGDWPNIKPPGWDPASDE+TKNTSA
Sbjct: 361 KSLYIRLGCRGDWPNIKPPGWDPASDENTKNTSA 384

[Close]

BLAST of Carg23591 vs. NCBI nr
Match: XP_022145268.1 (probable inactive shikimate kinase like 2, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 598.6 bits (1542), Expect = 1.5e-167
Identity = 320/389 (82.26%), Postives = 338/389 (86.89%), Query Frame = 0


Query: 1   MASASFTSALCFFSQNPIRNLEVSSSPIFYSSSNGVEFASNSIGLTSCTGLSPATSRLSS 60
           MAS SFT+ALCFFSQNPI+NLE  SSPI +S +NGVEFASNSI LTS  GLSPATSR SS
Sbjct: 1   MASTSFTTALCFFSQNPIKNLEF-SSPILFSITNGVEFASNSIALTSSAGLSPATSRFSS 60

Query: 61  RFIRNCSSSTAPVRTLDYEFTDGSSEVELRLQLETQDIRSSKDVFVDANETSLTIRVRRL 120
           RF RNCSSST PVRTLDYEFTDGSSEVELRLQL TQ+IRSSKD+FVDANETSLTIRV+R 
Sbjct: 61  RFARNCSSSTTPVRTLDYEFTDGSSEVELRLQLGTQEIRSSKDIFVDANETSLTIRVQRT 120

Query: 121 GSIVTLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGFTQL 180
           GSI+TLLETKQLFEKIKP+ETIWYIDEDQLVI+LKKHD DLKWPDIVESWESLTAG TQL
Sbjct: 121 GSIITLLETKQLFEKIKPSETIWYIDEDQLVINLKKHDSDLKWPDIVESWESLTAGSTQL 180

Query: 181 LKGTSIYLIGDSTDINQKVAHELAVYSTEYKRIAGNAPMIYHLPQDLIVPTQTEAKLRML 240
           LKGTSIYLIGDSTDINQKVAHELAV         G  P+     + L   ++      ML
Sbjct: 181 LKGTSIYLIGDSTDINQKVAHELAVG-------LGYTPL--STKELLETFSKQTIDSWML 240

Query: 241 AEGSEAVAQAENAVLESLSSHVRTVVATLGGRPGAARRTDTWRHLYAGFTIWLSQTEATD 300
           AEGS AVAQAE AVLESLSSHVR VVATLGG  GAA RTD WRHLYAGFT+WLSQTEA D
Sbjct: 241 AEGSNAVAQAETAVLESLSSHVRAVVATLGGEQGAAGRTDAWRHLYAGFTVWLSQTEAKD 300

Query: 301 ESAAKEEARRHMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQLVLSDKNLPDK 360
           ESAAKEEARRHMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQL LSDKNLP+K
Sbjct: 301 ESAAKEEARRHMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQLTLSDKNLPEK 360

Query: 361 KSLYIRLGCRGDWPNIKPPGWDPASDEDT 390
           KSLYIRLGCRGDWPNIKPPGWDPA+D+ T
Sbjct: 361 KSLYIRLGCRGDWPNIKPPGWDPAADDAT 379

[Close]

BLAST of Carg23591 vs. NCBI nr
Match: XP_008448645.1 (PREDICTED: probable inactive shikimate kinase like 2, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 595.5 bits (1534), Expect = 1.3e-166
Identity = 318/386 (82.38%), Postives = 338/386 (87.56%), Query Frame = 0


Query: 1   MASASFTSALCFFSQNPIRNLEVSSSPIFYSSSNGVEFASNSIGLTSCTGLSPATSRLSS 60
           MAS SFTSALCFFSQNPIRNL+  SSPI  SSS+GV F+S S  LTSC+ LSP+ SR SS
Sbjct: 1   MASTSFTSALCFFSQNPIRNLQF-SSPISSSSSSGVAFSSISTALTSCSSLSPSNSRFSS 60

Query: 61  RFIRNCSSSTAPVRTLDYEFTDGSSEVELRLQLETQDIRSSKDVFVDANETSLTIRVRRL 120
           RF RNCSSSTAPVRTLDYEFTD SSEVELRLQL TQDIRSSKDV+VDANETSLTIRV+RL
Sbjct: 61  RFTRNCSSSTAPVRTLDYEFTDSSSEVELRLQLGTQDIRSSKDVYVDANETSLTIRVQRL 120

Query: 121 GSIVTLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGFTQL 180
           GSI+TLLETKQLFEKIKPAETIWYIDEDQLVI+LKKHDPDLKWPDIVESWESLTAG TQL
Sbjct: 121 GSIITLLETKQLFEKIKPAETIWYIDEDQLVINLKKHDPDLKWPDIVESWESLTAGSTQL 180

Query: 181 LKGTSIYLIGDSTDINQKVAHELAVYSTEYKRIAGNAPMIYHLPQDLIVPTQTEAKLRML 240
           LKGTSI+LIGDSTDINQKVAHELAV         G  P+     + L   ++      ML
Sbjct: 181 LKGTSIFLIGDSTDINQKVAHELAVG-------LGYTPL--STKELLETFSKQTIDSWML 240

Query: 241 AEGSEAVAQAENAVLESLSSHVRTVVATLGGRPGAARRTDTWRHLYAGFTIWLSQTEATD 300
           AEGS AVAQAEN V+ESLSSHVR VVATLGGR GAA RTDTWRHLYAGFT+WLSQTEATD
Sbjct: 241 AEGSNAVAQAENTVIESLSSHVRAVVATLGGRLGAAGRTDTWRHLYAGFTVWLSQTEATD 300

Query: 301 ESAAKEEARRHMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQLVLSDKNLPDK 360
           ESAAKEEA+RHMQDS++AYSNAEVVVKLQGWDDAHSK VAQAALSALKQL+LSDKNLPDK
Sbjct: 301 ESAAKEEAKRHMQDSQLAYSNAEVVVKLQGWDDAHSKVVAQAALSALKQLILSDKNLPDK 360

Query: 361 KSLYIRLGCRGDWPNIKPPGWDPASD 387
           KSLYIRLGCRGDWPNIKPPGWDPASD
Sbjct: 361 KSLYIRLGCRGDWPNIKPPGWDPASD 376

[Close]

BLAST of Carg23591 vs. TAIR10
Match: AT2G35500.1 (shikimate kinase like 2)

HSP 1 Score: 404.8 bits (1039), Expect = 6.0e-113
Identity = 225/386 (58.29%), Postives = 280/386 (72.54%), Query Frame = 0


Query: 7   TSALCFFSQNPIRNLEVSSSPIFYSSSNGV------EFASNSIGLTSCTGLSPATSRLSS 66
           T+   F S N IR     SSP  +S  + +       F+ N I             R +S
Sbjct: 21  TTQATFLSSNRIR-----SSPRVFSGFHSLRRRGFRRFSQNVI-----------PDRFNS 80

Query: 67  RFIRNCSSSTAPVRTLDYEFTDGSSEVELRLQLETQDIRSSKDVFVDANETSLTIRVRRL 126
            F  NC S+ +   T+DYEFTDG  EVELRL+L+T +I S KD+ VDA+ TSL ++ +R 
Sbjct: 81  -FSCNCLSAVS-TSTIDYEFTDGGKEVELRLRLKTGEILSPKDISVDADGTSLAVKEKRN 140

Query: 127 GSIVTLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGFTQL 186
           G ++TLLET  LFEKI P+ETIWYIDEDQLV+++KK D +LKWPDIVESWESLTAG  QL
Sbjct: 141 GLLITLLETNHLFEKIMPSETIWYIDEDQLVVNMKKVDGELKWPDIVESWESLTAGMMQL 200

Query: 187 LKGTSIYLIGDSTDINQKVAHELAVYSTEYKRIAGNAPMIYHLPQDLIVPTQTEAKLRML 246
           LKG SIY++GDST+INQKV+ ELAV         G +P+     + L   ++      +L
Sbjct: 201 LKGASIYIVGDSTEINQKVSRELAVG-------LGYSPL--DSKELLESFSKQTIDSWIL 260

Query: 247 AEGSEAVAQAENAVLESLSSHVRTVVATLGGRPGAARRTDTWRHLYAGFTIWLSQTEATD 306
           AEG ++VA+AE++VLESLSSHVRTVV+TLGG+ GAA R D WRHLY+GFT+W+SQTEATD
Sbjct: 261 AEGPDSVAEAESSVLESLSSHVRTVVSTLGGKHGAAGRADQWRHLYSGFTVWVSQTEATD 320

Query: 307 ESAAKEEARRHMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQLVLSDKNLPDK 366
           E +AKEEARR  Q+ ++ YSNA+VVVKLQGWD  H+K+VAQA+LSALKQL++SDK LP K
Sbjct: 321 EESAKEEARRSKQEREIGYSNADVVVKLQGWDPTHAKSVAQASLSALKQLIISDKGLPGK 379

Query: 367 KSLYIRLGCRGDWPNIKPPGWDPASD 387
           KSLYIRLGCRGDWPNIKPPGWDP+SD
Sbjct: 381 KSLYIRLGCRGDWPNIKPPGWDPSSD 379

[Close]

BLAST of Carg23591 vs. Swiss-Prot
Match: sp|O82290|SKL2_ARATH (Probable inactive shikimate kinase like 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SKL2 PE=2 SV=2)

HSP 1 Score: 404.8 bits (1039), Expect = 1.1e-111
Identity = 225/386 (58.29%), Postives = 280/386 (72.54%), Query Frame = 0


Query: 7   TSALCFFSQNPIRNLEVSSSPIFYSSSNGV------EFASNSIGLTSCTGLSPATSRLSS 66
           T+   F S N IR     SSP  +S  + +       F+ N I             R +S
Sbjct: 21  TTQATFLSSNRIR-----SSPRVFSGFHSLRRRGFRRFSQNVI-----------PDRFNS 80

Query: 67  RFIRNCSSSTAPVRTLDYEFTDGSSEVELRLQLETQDIRSSKDVFVDANETSLTIRVRRL 126
            F  NC S+ +   T+DYEFTDG  EVELRL+L+T +I S KD+ VDA+ TSL ++ +R 
Sbjct: 81  -FSCNCLSAVS-TSTIDYEFTDGGKEVELRLRLKTGEILSPKDISVDADGTSLAVKEKRN 140

Query: 127 GSIVTLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGFTQL 186
           G ++TLLET  LFEKI P+ETIWYIDEDQLV+++KK D +LKWPDIVESWESLTAG  QL
Sbjct: 141 GLLITLLETNHLFEKIMPSETIWYIDEDQLVVNMKKVDGELKWPDIVESWESLTAGMMQL 200

Query: 187 LKGTSIYLIGDSTDINQKVAHELAVYSTEYKRIAGNAPMIYHLPQDLIVPTQTEAKLRML 246
           LKG SIY++GDST+INQKV+ ELAV         G +P+     + L   ++      +L
Sbjct: 201 LKGASIYIVGDSTEINQKVSRELAVG-------LGYSPL--DSKELLESFSKQTIDSWIL 260

Query: 247 AEGSEAVAQAENAVLESLSSHVRTVVATLGGRPGAARRTDTWRHLYAGFTIWLSQTEATD 306
           AEG ++VA+AE++VLESLSSHVRTVV+TLGG+ GAA R D WRHLY+GFT+W+SQTEATD
Sbjct: 261 AEGPDSVAEAESSVLESLSSHVRTVVSTLGGKHGAAGRADQWRHLYSGFTVWVSQTEATD 320

Query: 307 ESAAKEEARRHMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQLVLSDKNLPDK 366
           E +AKEEARR  Q+ ++ YSNA+VVVKLQGWD  H+K+VAQA+LSALKQL++SDK LP K
Sbjct: 321 EESAKEEARRSKQEREIGYSNADVVVKLQGWDPTHAKSVAQASLSALKQLIISDKGLPGK 379

Query: 367 KSLYIRLGCRGDWPNIKPPGWDPASD 387
           KSLYIRLGCRGDWPNIKPPGWDP+SD
Sbjct: 381 KSLYIRLGCRGDWPNIKPPGWDPSSD 379

[Close]

BLAST of Carg23591 vs. TrEMBL
Match: tr|A0A1S3BL22|A0A1S3BL22_CUCME (probable inactive shikimate kinase like 2, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490754 PE=4 SV=1)

HSP 1 Score: 595.5 bits (1534), Expect = 8.7e-167
Identity = 318/386 (82.38%), Postives = 338/386 (87.56%), Query Frame = 0


Query: 1   MASASFTSALCFFSQNPIRNLEVSSSPIFYSSSNGVEFASNSIGLTSCTGLSPATSRLSS 60
           MAS SFTSALCFFSQNPIRNL+  SSPI  SSS+GV F+S S  LTSC+ LSP+ SR SS
Sbjct: 1   MASTSFTSALCFFSQNPIRNLQF-SSPISSSSSSGVAFSSISTALTSCSSLSPSNSRFSS 60

Query: 61  RFIRNCSSSTAPVRTLDYEFTDGSSEVELRLQLETQDIRSSKDVFVDANETSLTIRVRRL 120
           RF RNCSSSTAPVRTLDYEFTD SSEVELRLQL TQDIRSSKDV+VDANETSLTIRV+RL
Sbjct: 61  RFTRNCSSSTAPVRTLDYEFTDSSSEVELRLQLGTQDIRSSKDVYVDANETSLTIRVQRL 120

Query: 121 GSIVTLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGFTQL 180
           GSI+TLLETKQLFEKIKPAETIWYIDEDQLVI+LKKHDPDLKWPDIVESWESLTAG TQL
Sbjct: 121 GSIITLLETKQLFEKIKPAETIWYIDEDQLVINLKKHDPDLKWPDIVESWESLTAGSTQL 180

Query: 181 LKGTSIYLIGDSTDINQKVAHELAVYSTEYKRIAGNAPMIYHLPQDLIVPTQTEAKLRML 240
           LKGTSI+LIGDSTDINQKVAHELAV         G  P+     + L   ++      ML
Sbjct: 181 LKGTSIFLIGDSTDINQKVAHELAVG-------LGYTPL--STKELLETFSKQTIDSWML 240

Query: 241 AEGSEAVAQAENAVLESLSSHVRTVVATLGGRPGAARRTDTWRHLYAGFTIWLSQTEATD 300
           AEGS AVAQAEN V+ESLSSHVR VVATLGGR GAA RTDTWRHLYAGFT+WLSQTEATD
Sbjct: 241 AEGSNAVAQAENTVIESLSSHVRAVVATLGGRLGAAGRTDTWRHLYAGFTVWLSQTEATD 300

Query: 301 ESAAKEEARRHMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQLVLSDKNLPDK 360
           ESAAKEEA+RHMQDS++AYSNAEVVVKLQGWDDAHSK VAQAALSALKQL+LSDKNLPDK
Sbjct: 301 ESAAKEEAKRHMQDSQLAYSNAEVVVKLQGWDDAHSKVVAQAALSALKQLILSDKNLPDK 360

Query: 361 KSLYIRLGCRGDWPNIKPPGWDPASD 387
           KSLYIRLGCRGDWPNIKPPGWDPASD
Sbjct: 361 KSLYIRLGCRGDWPNIKPPGWDPASD 376

[Close]

BLAST of Carg23591 vs. TrEMBL
Match: tr|A0A0A0L3V6|A0A0A0L3V6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G008320 PE=4 SV=1)

HSP 1 Score: 590.1 bits (1520), Expect = 3.6e-165
Identity = 316/393 (80.41%), Postives = 338/393 (86.01%), Query Frame = 0


Query: 1   MASASFTSALCFFSQNPIRNLEVSSSPIFYSSSNGVEFASNSIGLTSCTGLSPATSRLSS 60
           MAS SFTSALCF SQNPIRNL+  SSPIF SSS+GV FAS S  LTSC  LSP+ +R SS
Sbjct: 1   MASTSFTSALCFSSQNPIRNLQF-SSPIFSSSSSGVAFASISTALTSCFSLSPSNTRFSS 60

Query: 61  RFIRNCSSSTAPVRTLDYEFTDGSSEVELRLQLETQDIRSSKDVFVDANETSLTIRVRRL 120
           RF RNCSSSTAPVRTLDYEFTD SSEVELRLQL TQDIRSSKDV+VDAN+TSLTIRV+R 
Sbjct: 61  RFTRNCSSSTAPVRTLDYEFTDSSSEVELRLQLGTQDIRSSKDVYVDANDTSLTIRVQRP 120

Query: 121 GSIVTLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGFTQL 180
           GSI+TLLETKQLFEKIKPAETIWYIDEDQLVI+LKKHDPDLKWPDIVESWESLTAGF QL
Sbjct: 121 GSIITLLETKQLFEKIKPAETIWYIDEDQLVINLKKHDPDLKWPDIVESWESLTAGFAQL 180

Query: 181 LKGTSIYLIGDSTDINQKVAHELAVYSTEYKRIAGNAPMIYHLPQDLIVPTQTEAKLRML 240
           LKGTSI+LIGDSTDINQKVAHELAV         G  P+     + L   ++      ML
Sbjct: 181 LKGTSIFLIGDSTDINQKVAHELAVG-------LGYTPL--STKELLETLSKQTIDSWML 240

Query: 241 AEGSEAVAQAENAVLESLSSHVRTVVATLGGRPGAARRTDTWRHLYAGFTIWLSQTEATD 300
           AEGS+AVAQ EN V+ESLSSHVR VVATLGGR GAA RTDTWRHLYAGFT+WLSQTEATD
Sbjct: 241 AEGSDAVAQVENTVIESLSSHVRAVVATLGGRLGAAGRTDTWRHLYAGFTVWLSQTEATD 300

Query: 301 ESAAKEEARRHMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQLVLSDKNLPDK 360
           ESAAKEEA+RHMQDS++AYSNAEVVVKLQGWDDAHSK VAQAALSALKQL+LSDK+LPDK
Sbjct: 301 ESAAKEEAKRHMQDSQLAYSNAEVVVKLQGWDDAHSKVVAQAALSALKQLILSDKSLPDK 360

Query: 361 KSLYIRLGCRGDWPNIKPPGWDPASDEDTKNTS 394
           KSLYIRLGCRGDWPNIKPPGWDPASD    N S
Sbjct: 361 KSLYIRLGCRGDWPNIKPPGWDPASDGIANNIS 383

[Close]

BLAST of Carg23591 vs. TrEMBL
Match: tr|A0A1U8NF11|A0A1U8NF11_GOSHI (probable inactive shikimate kinase like 2, chloroplastic OS=Gossypium hirsutum OX=3635 GN=LOC107946669 PE=4 SV=1)

HSP 1 Score: 437.2 bits (1123), Expect = 3.9e-119
Identity = 239/393 (60.81%), Postives = 294/393 (74.81%), Query Frame = 0


Query: 2   ASASFTSALCFFSQNPIRNL--EVSSSPIFYSSSNGVEFASNSIGLTSCTGLSPATSRLS 61
           A+AS +S LC   QNP + L   + +    +       F   S G+T    +SP      
Sbjct: 4   AAASASSMLCLSLQNPTKTLHFSIKTHSFHFLKPQLPAFRRYSTGVTP---ISP------ 63

Query: 62  SRFIRNCSSSTAPVRTLDYEFTDGSSEVELRLQLETQDIRSSKDVFVDANETSLTIRVRR 121
              +R  S + +   T  YEF+DGSSEVELRLQL  QD+RS+KD+FVDA+ TSLT++V++
Sbjct: 64  ---LRGISCNCSSTNTTHYEFSDGSSEVELRLQLGGQDVRSAKDIFVDADGTSLTVKVQQ 123

Query: 122 LGSIVTLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGFTQ 181
            GSI+TL++T  LFEKIKPAETIWYID+DQLVISLKK DP+LKWPDI+ESWESL+AG  Q
Sbjct: 124 AGSIITLIDTNSLFEKIKPAETIWYIDDDQLVISLKKQDPNLKWPDIMESWESLSAGSMQ 183

Query: 182 LLKGTSIYLIGDSTDINQKVAHELAVYSTEYKRIAGNAPMIYHLPQDLIVPTQTEAKLR- 241
           LLKGTSIY++GDST+INQKVA ELAV         G  P++    ++L+   +T AK   
Sbjct: 184 LLKGTSIYIVGDSTEINQKVARELAV-------ALGYTPLV---TKELL---ETFAKQTV 243

Query: 242 ---MLAEGSEAVAQAENAVLESLSSHVRTVVATLGGRPGAARRTDTWRHLYAGFTIWLSQ 301
              ++AEGS++VA+AE+AVLESLSSHVR VVATLGG  GAA RTD WRHLY+GF+IWLSQ
Sbjct: 244 DSWVVAEGSDSVAEAESAVLESLSSHVRAVVATLGGSHGAAARTDKWRHLYSGFSIWLSQ 303

Query: 302 TEATDESAAKEEARRHMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQLVLSDK 361
           TEATDE +AKEEARRH++D  V Y+NA+VVVKLQGWD  H+K+VAQA+LSALK+L+LSDK
Sbjct: 304 TEATDEDSAKEEARRHIEDGNVGYTNADVVVKLQGWDADHAKSVAQASLSALKRLILSDK 363

Query: 362 NLPDKKSLYIRLGCRGDWPNIKPPGWDPASDED 389
            LP KKSLYIRLGCRGDWPNIKPPGWDP+   D
Sbjct: 364 KLPGKKSLYIRLGCRGDWPNIKPPGWDPSDAAD 371

[Close]

BLAST of Carg23591 vs. TrEMBL
Match: tr|A0A0D2RKA0|A0A0D2RKA0_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_008G224300 PE=4 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 4.4e-118
Identity = 237/393 (60.31%), Postives = 294/393 (74.81%), Query Frame = 0


Query: 2   ASASFTSALCFFSQNPIRNL--EVSSSPIFYSSSNGVEFASNSIGLTSCTGLSPATSRLS 61
           A+AS +S LC   QNP + L   + +    +       F   S G+T    +SP      
Sbjct: 4   AAASASSMLCLSLQNPTKTLHFSIKTHSFHFLKPQLPAFRRYSTGVTP---ISP------ 63

Query: 62  SRFIRNCSSSTAPVRTLDYEFTDGSSEVELRLQLETQDIRSSKDVFVDANETSLTIRVRR 121
              +R  S + +   T  YEF+DGSSEVELRLQL  QD+ S+KD+FVDA+ TSLT++V++
Sbjct: 64  ---LRGISCNCSSTNTTHYEFSDGSSEVELRLQLGGQDVLSAKDIFVDADGTSLTVKVQQ 123

Query: 122 LGSIVTLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGFTQ 181
            GSI+TL++T  LFEKIKPAETIWYID+DQLVISLKK DP+LKWPDI+ESWESL+AG  Q
Sbjct: 124 AGSIITLIDTTSLFEKIKPAETIWYIDDDQLVISLKKQDPNLKWPDIMESWESLSAGSMQ 183

Query: 182 LLKGTSIYLIGDSTDINQKVAHELAVYSTEYKRIAGNAPMIYHLPQDLIVPTQTEAKLR- 241
           LLKGTSIY++GDST+INQKVA ELAV         G  P++    ++L+   +T AK   
Sbjct: 184 LLKGTSIYVVGDSTEINQKVARELAV-------ALGYTPLV---TKELL---ETFAKQTV 243

Query: 242 ---MLAEGSEAVAQAENAVLESLSSHVRTVVATLGGRPGAARRTDTWRHLYAGFTIWLSQ 301
              ++AEGS++VA+AE+A+LESLSSHVR VVATLGG  GAA RTD WRHLY+GF+IWLSQ
Sbjct: 244 DSWVVAEGSDSVAEAESAILESLSSHVRAVVATLGGSHGAAARTDKWRHLYSGFSIWLSQ 303

Query: 302 TEATDESAAKEEARRHMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQLVLSDK 361
           TEATDE +AKEEARRH++D  V Y+NA+VVVKLQGWD  H+K+VAQA+LSALK+L+LSDK
Sbjct: 304 TEATDEDSAKEEARRHIEDGNVGYTNADVVVKLQGWDADHAKSVAQASLSALKRLILSDK 363

Query: 362 NLPDKKSLYIRLGCRGDWPNIKPPGWDPASDED 389
            LP KKSLYIRLGCRGDWPNIKPPGWDP++  D
Sbjct: 364 KLPGKKSLYIRLGCRGDWPNIKPPGWDPSNAAD 371

[Close]

BLAST of Carg23591 vs. TrEMBL
Match: tr|A0A2P5QKV8|A0A2P5QKV8_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD27932 PE=4 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 2.2e-117
Identity = 236/393 (60.05%), Postives = 293/393 (74.55%), Query Frame = 0


Query: 2   ASASFTSALCFFSQNPIRNL--EVSSSPIFYSSSNGVEFASNSIGLTSCTGLSPATSRLS 61
           A+AS +S LC   QNP + L   + +    +       F   S G+T    +SP      
Sbjct: 4   AAASASSMLCLSLQNPTKTLHFSIKTHSFHFLKPQLPAFRRYSTGVTP---ISP------ 63

Query: 62  SRFIRNCSSSTAPVRTLDYEFTDGSSEVELRLQLETQDIRSSKDVFVDANETSLTIRVRR 121
              +R  S + +   T  YEF+DGSSEVELRLQL  QD+ S+KD+FVDA+ TSLT++V++
Sbjct: 64  ---LRGISCNCSSTNTTHYEFSDGSSEVELRLQLGGQDVLSAKDIFVDADGTSLTVKVQQ 123

Query: 122 LGSIVTLLETKQLFEKIKPAETIWYIDEDQLVISLKKHDPDLKWPDIVESWESLTAGFTQ 181
            GSI+TL++T  LFEKIKPAETIWYID+DQLVISLKK DP+LKWPDI+ESWESL+AG  Q
Sbjct: 124 AGSIITLIDTNSLFEKIKPAETIWYIDDDQLVISLKKQDPNLKWPDIMESWESLSAGSMQ 183

Query: 182 LLKGTSIYLIGDSTDINQKVAHELAVYSTEYKRIAGNAPMIYHLPQDLIVPTQTEAKLR- 241
           LLKGTSIY++GDST+INQKVA ELAV         G  P++    ++L+   +T AK   
Sbjct: 184 LLKGTSIYIVGDSTEINQKVARELAV-------ALGYTPLV---TKELL---ETFAKQTV 243

Query: 242 ---MLAEGSEAVAQAENAVLESLSSHVRTVVATLGGRPGAARRTDTWRHLYAGFTIWLSQ 301
              ++AEGS++VA+AE+A+LESLSSHVR VVATLGG  GAA  TD WRHLY+GF+IWLSQ
Sbjct: 244 DSWVVAEGSDSVAEAESAILESLSSHVRAVVATLGGSHGAAAWTDKWRHLYSGFSIWLSQ 303

Query: 302 TEATDESAAKEEARRHMQDSKVAYSNAEVVVKLQGWDDAHSKAVAQAALSALKQLVLSDK 361
           TEATDE +AKEEARRH++D  V Y+NA+VVVKLQGWD  H+K+VAQA+LSALK+L+LSDK
Sbjct: 304 TEATDEDSAKEEARRHIEDGNVGYTNADVVVKLQGWDADHAKSVAQASLSALKRLILSDK 363

Query: 362 NLPDKKSLYIRLGCRGDWPNIKPPGWDPASDED 389
            LP KKSLYIRLGCRGDWPNIKPPGWDP++  D
Sbjct: 364 KLPGKKSLYIRLGCRGDWPNIKPPGWDPSNAAD 371

The following BLAST results are available for this feature:

BLAST of Carg23591 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023553268.1	3.5e-188	89.85	probable inactive shikimate kinase like 2, chloroplastic isoform X1 [Cucurbita p...	[more]
XP_022923578.1	5.1e-187	89.85	probable inactive shikimate kinase like 2, chloroplastic [Cucurbita moschata]	[more]
XP_022965359.1	3.3e-186	89.59	probable inactive shikimate kinase like 2, chloroplastic [Cucurbita maxima]	[more]
XP_022145268.1	1.5e-167	82.26	probable inactive shikimate kinase like 2, chloroplastic isoform X1 [Momordica c...	[more]
XP_008448645.1	1.3e-166	82.38	PREDICTED: probable inactive shikimate kinase like 2, chloroplastic isoform X1 [...	[more]

BLAST of Carg23591 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G35500.1	6.0e-113	58.29	shikimate kinase like 2	[more]

BLAST of Carg23591 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O82290\|SKL2_ARATH	1.1e-111	58.29	Probable inactive shikimate kinase like 2, chloroplastic OS=Arabidopsis thaliana...	[more]

BLAST of Carg23591 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BL22\|A0A1S3BL22_CUCME	8.7e-167	82.38	probable inactive shikimate kinase like 2, chloroplastic isoform X1 OS=Cucumis m...	[more]
tr\|A0A0A0L3V6\|A0A0A0L3V6_CUCSA	3.6e-165	80.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G008320 PE=4 SV=1	[more]
tr\|A0A1U8NF11\|A0A1U8NF11_GOSHI	3.9e-119	60.81	probable inactive shikimate kinase like 2, chloroplastic OS=Gossypium hirsutum O...	[more]
tr\|A0A0D2RKA0\|A0A0D2RKA0_GOSRA	4.4e-118	60.31	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_008G224300 PE=4 ...	[more]
tr\|A0A2P5QKV8\|A0A2P5QKV8_GOSBA	2.2e-117	60.05	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD27932 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007052	CS_dom
IPR008978	HSP20-like_chaperone

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23591-RA	Carg23591-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 174..363 e-value: 1.7E-6 score: 30.0
None	No IPR available	PANTHER	PTHR21087	SHIKIMATE KINASE	coord: 49..388
None	No IPR available	PANTHER	PTHR21087:SF11	INACTIVE SHIKIMATE KINASE LIKE 2, CHLOROPLASTIC-RELATED	coord: 49..388
None	No IPR available	CDD	cd06467	p23_NUDC_like	coord: 78..167 e-value: 4.55559E-12 score: 60.639
IPR008978	HSP20-like chaperone	GENE3D	G3DSA:2.60.40.790		coord: 66..173 e-value: 5.8E-14 score: 54.1
IPR008978	HSP20-like chaperone	SUPERFAMILY	SSF49764	HSP20-like chaperones	coord: 69..171
IPR007052	CS domain	PFAM	PF04969	CS	coord: 78..156 e-value: 3.2E-6 score: 27.9
IPR007052	CS domain	PROSITE	PS51203	CS	coord: 73..167 score: 12.174

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23591	Cla008834	Watermelon (97103) v1	carwmB1049
Carg23591	Csa3G008320	Cucumber (Chinese Long) v2	carcuB1064
Carg23591	MELO3C013825	Melon (DHL92) v3.5.1	carmeB1017
Carg23591	ClCG10G001310	Watermelon (Charleston Gray)	carwcgB1021
Carg23591	CSPI03G01360	Wild cucumber (PI 183967)	carcpiB1085
Carg23591	Cucsa.322060	Cucumber (Gy14) v1	carcgyB1164
Carg23591	CmaCh16G011860	Cucurbita maxima (Rimu)	carcmaB1453
Carg23591	CmoCh16G012340	Cucurbita moschata (Rifu)	carcmoB1407
Carg23591	Lsi07G011680	Bottle gourd (USVL1VR-Ls)	carlsiB958
Carg23591	Cp4.1LG14g09800	Cucurbita pepo (Zucchini)	carcpeB1461
Carg23591	CsGy3G001250	Cucumber (Gy14) v2	carcgybB1033
Carg23591	MELO3C013825.2	Melon (DHL92) v3.6.1	carmedB1029
Carg23591	CsaV3_3G001380	Cucumber (Chinese Long) v3	carcucB1097
Carg23591	Cla97C10G185940	Watermelon (97103) v2	carwmbB1107
Carg23591	Bhi07G000819	Wax gourd	carwgoB1232

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23591	Silver-seed gourd	carcarB613
Carg23591	Silver-seed gourd	carcarB651
Carg23591	Cucurbita maxima (Rimu)	carcmaB1454
Carg23591	Cucurbita moschata (Rifu)	carcmoB1408
Carg23591	Cucurbita moschata (Rifu)	carcmoB1409
Carg23591	Cucurbita pepo (Zucchini)	carcpeB1462
Carg23591	Cucurbita pepo (Zucchini)	carcpeB1463
Carg23591	Bottle gourd (USVL1VR-Ls)	carlsiB957
Carg23591	Wax gourd	carwgoB1231