Carg23548 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGGATCATCTTTGAATTTGAAGCTAACCATTTCTTTTTTGTTTTCATATCTTTGAGATTCCTTCTCACTTTCTGTCCAAGTTTCTGGAAAAGGAAGGTGAAGGAAGAAATGGGTATCGCTAATCAGGATGCTATGAAGCAGTTTCAACTGCTAATCAATGAAGGTGATCTCTAGAAACTAAGTTTCGTCTTGTTCTGTGATGTGTATTTGCTAACATTTTCCTTTCTTCATCGCCAAACAGTCGATGGATCACTGACGAACTCGTTTGAGGTTTGTTCTTTGATTTTTGATCTTTATCTACTGCGATCTGTTTTTTTGATTAGATTATGGGAATAAAACAAAATGTAATGCGACATTGGAGGTTTTCGATCTTAAACTACTGTTTAGTGTTAATTTCTCGATAGCAGCTTGAGTTGTTCATTCGTAAAATTCTGTGTGACTTAGATCTGTTTCTGTGATGGCACTGCGTTTATTTATAAGAACGACATTCATTCTTGGTAGGAAATGGGGCTGCCTTGTAGTTGAAGCTAGAACAAATTTAACCAGTCCAGAGAAATCAATTGATTCTTGTTTATTTTCTATTTTTTAATCAAGATCATGATTTAGTTGATCTGGGATGTTCACTTGCTTTTACACAAAAAATGTTCCATCTCAGATCAAGTTTTATGAGTTCTATGAGAAGAAGATCAAATTGTTGTTTGACTGAACCAGTGGTGATTTGTTGGTTTCTGGGTGAAGTAATTGAAGTTTTGGATTGGTGAAAATGTTGGAAGGGTTAGATTTCTGGGTGTAAAACGAATGCAGCTTCCTTCTTGAAAAGAATTTGAGCTTGAATTTTAATAACAGTAATAATGAGAAAGAAACTTATGTGGGATAATTATAGACTACTGCCTTACGTATGAACTGTGACTGTCTTATTATCTCCAGAATATGCATCAAGGACATCCAGAAGAAACTTTGGAACGCTTTCTCAAGGCAAGGGACTGGAATGTAGCCAAAGCCCACAAAATGGTTAGATAAGTCAGTCAGCTTAGGAGTTTTAAATTTTGGATAAATTCTCAACGTATTTTGTTTGTTCCTCACTCACTTTTGGTTTGTTTTTTCCCTCTTTTGCCTCCAAATCTTCAGTTAATAGATTGTCTACATTGGAGGATACAAAATGAGATTGACAACATATTGTCAGTGAGTTCTTTTTCTTCTGTTATTGTTAAATAAGTGTGTGATATTTTCTATGATTATACCTTTCATTCCCCCAGTTGATGCATATTGTAGTACATTTTTATCTCATCAGTAAAAGAAGATTAAAAGAATATAAATGTAGAAACAGCCACTACTACCACCAGAAATGGCTGGAACGTGAGAAGTCTAAGCATCTTGTTTGTGGTTCAATGCCTCAGAAGCAAGAAAATGGACTAAAAATTTGAAGTCTTCAGTAATGAAAAAATGGCAAACGTAGCAATTGCCATAATATTATGTCTTCGTTATTTCTACAGTTACCATGCTAGAATCTAAATTTCTATTGATATTTTGATAATTTTGATGCCCTAGGCTTTTAGTATAGCTATATCTCTCTGTGAATCTTTTTTGTAATGAGAATCTCTCTGTAGTTGGTTTTTGGGCTCCATCTTGCTATCTTGGTTTTTGGTGGGCTGTCTTTTTTATATGCCCTTGTTTTTCTTTCATCTTTCTCACTGGAAACTCAGTTTCTTACCCAAACATAATAACTATATTGACAATAGCAAGCAGAGATGGTACAATACGTCTCATTATTATTATGTGTTGAAGTCTAAGGTTCCTTTTGGCTTTACATACTTGTACGACATTTAGTTTATACCTCGTGTTATTACAGAAACCAATCATTCCCCCTGAGCTATACAGAGCAGTACGAGACTCTCAGTTGGTAGGATTATCTGGATACTCAAAAGAGGTACATAAATAGAATCATGTTGTTCTTCAATATTTGATCTTTAACACATTTTCTAGATACCCACACGCAACATGAATTATATTTTGCTACTAGAAATTAAATCGACTTTTCTTCCCTCACTAAAGCTGTGACCTTGTTCCTCATTTATTTGCTCCTCTTTTCCTCTATGCATTATTTTTTCAGGGTCTTCCTGTCATAGCTGTTGGTGTTGGTCAAAGCACATTTGACAAGGCATCTGTAAGGATTTGCTTTTCCTCTCTGTTACCATGTCTGGGTAGCCTTTTCTGTAAGCTGAGAGACTAGAAAACTAATTTTGAACTTTTGAGACATGATCAAATAATATGCTCAGATCAAATACATCATATTAACTAAATATCTGACAAAATTCATTACATTGGGTATATAATATTCTCAGATAAGGGTAATTTACGTGGGTTCTTTCTTCTAGGTTCATTATTATGTGCAGTCACACATCCAAATGAATGAATATAGGGATCGCGTTGTGTTGGTAAGTATTTAAGATCATTCAATCACCTTTCTGGCTTATAATTGTTATTTAATATAAAATGCTCGGTTTGTTGTAGCCTGCTGCGACAAAGAAGCAGGGACGACATATAAGCACCTGCCTCAAGGTGTTGGATATGACTGGTTTAAAGCTTTCAGCATTGAATCAAATAAAGGTGCTTCTTAATTCTTTCTACGTCACAACTACAACATTTCCTTACCTTCAGCTCTATTTTTGGAATCAAATATGCACAAGTTTGAGAAAGCCAAAATTAGTCAAACTTTAGTTGATAGAATCAATTTTTCCACTTTTCCATTGATGGGTAGCCCAAAACATGGTTGCTTGTGTTCTTTGATCGTTTTCTCCTTCCGCGTATGCAGCTGTTGCTTCCTTCTACATACAGATTTCTTATTGTTAATGCTCTTTTCATTTTTGGTTAATGCAGCTTCTGACTGTCATATCTACCATTGACGACTTGAACTATCCCGAGAAGACTGATACTTACTACATCGTAAATGTTCCATATGTATTTTCTGCTTGCTGGAAGGTTTGTGGCTATATAAATTCATATTGGAGAAATGTTCTCAATATACTTAAATATACCAGAAAGGAAAAAGAAAAAAATTCTGGGACTGTGGGTCAATCTTTAAGGGAATATGCACATGATTTATTGTTTCCTTGCTGGCAGGTCGTAAAACCTCTTTTGCAGGAGAGGACAAGGAGAAAAATCCAAGTGCTACAAAACTGTGGGCGAGATGAACTGCTAAAGGCAAGCTTTTCCCTCCCTCCCCCCCCCCCCCCCCAGAGAAGTAAAGGTCTCTCGTATTAGGTGGAAAAGATATAAAACCACTTTTCATTGGAACTTGTTCCACTAGGGTGGCACTGACAGGTGGTACACTGCATCACATATCCTTCTATCCTTGGAAGAATATGGAAAATCTCACCGTCCAAAAAAGAATAATATCCCAAGTAGATAGGATCCTTTTTTTGAGTTTTTTCTTGTCCAGATTTTTAAAACAAAACGCGTCTTTTAATAAGAGATTTCCACACTCGTATAAAAAATATTTGTTCTCCTTTTCAACTGATGTGGGGTCTTGCAGTTATCTTTACGGTAAGATATGCTAATGCTACCCTTAGTGATGAATCCAAACCACCAATTGCAGATAGCTGCTTTTTTAGCAGTTCCACTGCGGAATCCAGCCTGATATCCATGTGGTTCTGTTCCATGTTGATTAGGTTCATCCTTGCCTTTAAATTTCTAAACTGCATAAAGTTGCAGGGCTTAAGTGTGTTCACCGCTTTAAAGTTCTAGTTTCAGCTGACTGTAGTAGATTTTTCTGATCAGATTTGACCTGTAGCTTGTTCATTCCTCTGATGCTTTAACAGCTTTATCTCCAACCATGGTAGATAATTGAAAGAGCACTGTGGCATCATATGCACTAATATCATCTTAACATGATGTTTTCTTGTTTTTTGATGTCTGGAACTCATCTGTAGGTAATGGATTATGCATCACTACCACATTTTTGTCGGAAAGAAAGATCAGGATCATCTCGGCATTCTGAGAATGGAACTACAGAAAACTGTTTCTCCTACGACAGCGCATTCCATCAACAGCTCTACAATTACATTCATCAGCAAGGTGCAGTTAGAGAGCCCATTGTTCCAATCAAACAAGGATCATTTCATGTAGACTTCCCAGAACCAGATCCAAGAGACGTCGAAATCGCCAAAACGATCGAAACAGAGTTCCATAAGATGGAAAACCACAACAATGCTCTCAGCTATTCCATGAATGGCCTTAAAGTCAATGGAGACTGATGAATGAAGAACACTAATCATGTCTAGTAAGCTACACGCCTAGTGTGTTATTACTCCATAGAAAGCTTATATACAGTATCTACTACTGCCATTGGTTCCAGGACAAAGCAATTTTTGTATACATTGGCTTCTCTCTTCTATGCTTTAAGCTAGTCTCGTTCGAGATGCCATAAAAAGAAATGGTTCGATCCTCTTATTTTGATTACAAGAAGTTTTAAGAACCCTTCTC AGGATCATCTTTGAATTTGAAGCTAACCATTTCTTTTTTGTTTTCATATCTTTGAGATTCCTTCTCACTTTCTGTCCAAGTTTCTGGAAAAGGAAGGTGAAGGAAGAAATGGGTATCGCTAATCAGGATGCTATGAAGCAGTTTCAACTGCTAATCAATGAAGTCGATGGATCACTGACGAACTCGTTTGAGAATATGCATCAAGGACATCCAGAAGAAACTTTGGAACGCTTTCTCAAGGCAAGGGACTGGAATGTAGCCAAAGCCCACAAAATGTTAATAGATTGTCTACATTGGAGGATACAAAATGAGATTGACAACATATTGTCAAAACCAATCATTCCCCCTGAGCTATACAGAGCAGTACGAGACTCTCAGTTGGTAGGATTATCTGGATACTCAAAAGAGGGTCTTCCTGTCATAGCTGTTGGTGTTGGTCAAAGCACATTTGACAAGGCATCTGTTCATTATTATGTGCAGTCACACATCCAAATGAATGAATATAGGGATCGCGTTGTGTTGCCTGCTGCGACAAAGAAGCAGGGACGACATATAAGCACCTGCCTCAAGGTGTTGGATATGACTGGTTTAAAGCTTTCAGCATTGAATCAAATAAAGCTTCTGACTGTCATATCTACCATTGACGACTTGAACTATCCCGAGAAGACTGATACTTACTACATCGTAAATGTTCCATATGTATTTTCTGCTTGCTGGAAGGTCGTAAAACCTCTTTTGCAGGAGAGGACAAGGAGAAAAATCCAAGTGCTACAAAACTGTGGGCGAGATGAACTGCTAAAGGTAATGGATTATGCATCACTACCACATTTTTGTCGGAAAGAAAGATCAGGATCATCTCGGCATTCTGAGAATGGAACTACAGAAAACTGTTTCTCCTACGACAGCGCATTCCATCAACAGCTCTACAATTACATTCATCAGCAAGGTGCAGTTAGAGAGCCCATTGTTCCAATCAAACAAGGATCATTTCATGTAGACTTCCCAGAACCAGATCCAAGAGACGTCGAAATCGCCAAAACGATCGAAACAGAGTTCCATAAGATGGAAAACCACAACAATGCTCTCAGCTATTCCATGAATGGCCTTAAAGTCAATGGAGACTGATGAATGAAGAACACTAATCATGTCTAGTAAGCTACACGCCTAGTGTGTTATTACTCCATAGAAAGCTTATATACAGTATCTACTACTGCCATTGGTTCCAGGACAAAGCAATTTTTGTATACATTGGCTTCTCTCTTCTATGCTTTAAGCTAGTCTCGTTCGAGATGCCATAAAAAGAAATGGTTCGATCCTCTTATTTTGATTACAAGAAGTTTTAAGAACCCTTCTC AGGATCATCTTTGAATTTGAAGCTAACCATTTCTTTTTTGTTTTCATATCTTTGAGATTCCTTCTCACTTTCTGTCCAAGTTTCTGGAAAAGGAAGGTGAAGGAAGAAATGGGTATCGCTAATCAGGATGCTATGAAGCAGTTTCAACTGCTAATCAATGAAGTCGATGGATCACTGACGAACTCGTTTGAGAATATGCATCAAGGACATCCAGAAGAAACTTTGGAACGCTTTCTCAAGGCAAGGGACTGGAATGTAGCCAAAGCCCACAAAATGTTAATAGATTGTCTACATTGGAGGATACAAAATGAGATTGACAACATATTGTCAAAACCAATCATTCCCCCTGAGCTATACAGAGCAGTACGAGACTCTCAGTTGGTAGGATTATCTGGATACTCAAAAGAGGGTCTTCCTGTCATAGCTGTTGGTGTTGGTCAAAGCACATTTGACAAGGCATCTGTTCATTATTATGTGCAGTCACACATCCAAATGAATGAATATAGGGATCGCGTTGTGTTGCCTGCTGCGACAAAGAAGCAGGGACGACATATAAGCACCTGCCTCAAGGTGTTGGATATGACTGGTTTAAAGCTTTCAGCATTGAATCAAATAAAGCTTCTGACTGTCATATCTACCATTGACGACTTGAACTATCCCGAGAAGACTGATACTTACTACATCGTAAATGTTCCATATGTATTTTCTGCTTGCTGGAAGGTCGTAAAACCTCTTTTGCAGGAGAGGACAAGGAGAAAAATCCAAGTGCTACAAAACTGTGGGCGAGATGAACTGCTAAAGGTAATGGATTATGCATCACTACCACATTTTTGTCGGAAAGAAAGATCAGGATCATCTCGGCATTCTGAGAATGGAACTACAGAAAACTGTTTCTCCTACGACAGCGCATTCCATCAACAGCTCTACAATTACATTCATCAGCAAGGTGCAGTTAGAGAGCCCATTGTTCCAATCAAACAAGGATCATTTCATGTAGACTTCCCAGAACCAGATCCAAGAGACGTCGAAATCGCCAAAACGATCGAAACAGAGTTCCATAAGATGGAAAACCACAACAATGCTCTCAGCTATTCCATGAATGGCCTTAAAGTCAATGGAGACTGA RIIFEFEANHFFFVFISLRFLLTFCPSFWKRKVKEEMGIANQDAMKQFQLLINEVDGSLTNSFENMHQGHPEETLERFLKARDWNVAKAHKMLIDCLHWRIQNEIDNILSKPIIPPELYRAVRDSQLVGLSGYSKEGLPVIAVGVGQSTFDKASVHYYVQSHIQMNEYRDRVVLPAATKKQGRHISTCLKVLDMTGLKLSALNQIKLLTVISTIDDLNYPEKTDTYYIVNVPYVFSACWKVVKPLLQERTRRKIQVLQNCGRDELLKVMDYASLPHFCRKERSGSSRHSENGTTENCFSYDSAFHQQLYNYIHQQGAVREPIVPIKQGSFHVDFPEPDPRDVEIAKTIETEFHKMENHNNALSYSMNGLKVNGD
BLAST of Carg23548 vs. NCBI nr
Match: XP_023005459.1 (phosphatidylinositol/phosphatidylcholine transfer protein SFH1-like [Cucurbita maxima] >XP_023540489.1 phosphatidylinositol/phosphatidylcholine transfer protein SFH1-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 686.8 bits (1771), Expect = 4.1e-194 Identity = 337/338 (99.70%), Postives = 337/338 (99.70%), Query Frame = 0
BLAST of Carg23548 vs. NCBI nr
Match: XP_022936458.1 (phosphatidylinositol/phosphatidylcholine transfer protein SFH1-like [Cucurbita moschata]) HSP 1 Score: 682.2 bits (1759), Expect = 1.0e-192 Identity = 337/338 (99.70%), Postives = 337/338 (99.70%), Query Frame = 0
BLAST of Carg23548 vs. NCBI nr
Match: XP_008449044.1 (PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH2 [Cucumis melo]) HSP 1 Score: 641.3 bits (1653), Expect = 2.0e-180 Identity = 312/338 (92.31%), Postives = 328/338 (97.04%), Query Frame = 0
BLAST of Carg23548 vs. NCBI nr
Match: XP_004148256.1 (PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH2 [Cucumis sativus] >XP_011650475.1 PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH2 [Cucumis sativus] >KGN56028.1 hypothetical protein Csa_3G047890 [Cucumis sativus]) HSP 1 Score: 636.7 bits (1641), Expect = 4.9e-179 Identity = 311/338 (92.01%), Postives = 326/338 (96.45%), Query Frame = 0
BLAST of Carg23548 vs. NCBI nr
Match: XP_022144108.1 (phosphatidylinositol/phosphatidylcholine transfer protein SFH2 isoform X1 [Momordica charantia]) HSP 1 Score: 618.2 bits (1593), Expect = 1.8e-173 Identity = 302/333 (90.69%), Postives = 317/333 (95.20%), Query Frame = 0
BLAST of Carg23548 vs. TAIR10
Match: AT1G55840.1 (Sec14p-like phosphatidylinositol transfer family protein) HSP 1 Score: 476.9 bits (1226), Expect = 1.2e-134 Identity = 223/321 (69.47%), Postives = 268/321 (83.49%), Query Frame = 0
BLAST of Carg23548 vs. TAIR10
Match: AT5G47730.1 (Sec14p-like phosphatidylinositol transfer family protein) HSP 1 Score: 462.2 bits (1188), Expect = 3.0e-130 Identity = 224/344 (65.12%), Postives = 273/344 (79.36%), Query Frame = 0
BLAST of Carg23548 vs. TAIR10
Match: AT4G34580.1 (Sec14p-like phosphatidylinositol transfer family protein) HSP 1 Score: 99.0 bits (245), Expect = 6.6e-21 Identity = 78/260 (30.00%), Postives = 119/260 (45.77%), Query Frame = 0
BLAST of Carg23548 vs. TAIR10
Match: AT4G39180.1 (Sec14p-like phosphatidylinositol transfer family protein) HSP 1 Score: 97.8 bits (242), Expect = 1.5e-20 Identity = 73/226 (32.30%), Postives = 107/226 (47.35%), Query Frame = 0
BLAST of Carg23548 vs. TAIR10
Match: AT2G21540.1 (SEC14-like 3) HSP 1 Score: 97.1 bits (240), Expect = 2.5e-20 Identity = 69/226 (30.53%), Postives = 105/226 (46.46%), Query Frame = 0
BLAST of Carg23548 vs. Swiss-Prot
Match: sp|F4JLE5|SFH1_ARATH (Phosphatidylinositol/phosphatidylcholine transfer protein SFH1 OS=Arabidopsis thaliana OX=3702 GN=SFH1 PE=2 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 1.2e-19 Identity = 78/260 (30.00%), Postives = 119/260 (45.77%), Query Frame = 0
BLAST of Carg23548 vs. Swiss-Prot
Match: sp|F4JVA9|SFH2_ARATH (Phosphatidylinositol/phosphatidylcholine transfer protein SFH2 OS=Arabidopsis thaliana OX=3702 GN=SFH2 PE=3 SV=1) HSP 1 Score: 97.8 bits (242), Expect = 2.7e-19 Identity = 73/226 (32.30%), Postives = 107/226 (47.35%), Query Frame = 0
BLAST of Carg23548 vs. Swiss-Prot
Match: sp|Q93ZE9|SFH3_ARATH (Phosphatidylinositol/phosphatidylcholine transfer protein SFH3 OS=Arabidopsis thaliana OX=3702 GN=SFH3 PE=2 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 4.5e-19 Identity = 69/226 (30.53%), Postives = 105/226 (46.46%), Query Frame = 0
BLAST of Carg23548 vs. Swiss-Prot
Match: sp|F4J7S8|SFH9_ARATH (Phosphatidylinositol/phosphatidylcholine transfer protein SFH9 OS=Arabidopsis thaliana OX=3702 GN=SFH9 PE=2 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 2.3e-18 Identity = 63/210 (30.00%), Postives = 103/210 (49.05%), Query Frame = 0
BLAST of Carg23548 vs. Swiss-Prot
Match: sp|Q9SI13|SFH10_ARATH (Phosphatidylinositol/phosphatidylcholine transfer protein SFH10 OS=Arabidopsis thaliana OX=3702 GN=SFH10 PE=3 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 2.9e-18 Identity = 76/264 (28.79%), Postives = 116/264 (43.94%), Query Frame = 0
BLAST of Carg23548 vs. TrEMBL
Match: tr|A0A1S3BM24|A0A1S3BM24_CUCME (phosphatidylinositol/phosphatidylcholine transfer protein SFH2 OS=Cucumis melo OX=3656 GN=LOC103491033 PE=4 SV=1) HSP 1 Score: 641.3 bits (1653), Expect = 1.3e-180 Identity = 312/338 (92.31%), Postives = 328/338 (97.04%), Query Frame = 0
BLAST of Carg23548 vs. TrEMBL
Match: tr|A0A0A0L2T6|A0A0A0L2T6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G047890 PE=4 SV=1) HSP 1 Score: 636.7 bits (1641), Expect = 3.2e-179 Identity = 311/338 (92.01%), Postives = 326/338 (96.45%), Query Frame = 0
BLAST of Carg23548 vs. TrEMBL
Match: tr|D7UAJ5|D7UAJ5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_19s0015g00760 PE=4 SV=1) HSP 1 Score: 562.4 bits (1448), Expect = 7.7e-157 Identity = 272/338 (80.47%), Postives = 302/338 (89.35%), Query Frame = 0
BLAST of Carg23548 vs. TrEMBL
Match: tr|M5VZ33|M5VZ33_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G025500 PE=4 SV=1) HSP 1 Score: 552.7 bits (1423), Expect = 6.1e-154 Identity = 269/336 (80.06%), Postives = 301/336 (89.58%), Query Frame = 0
BLAST of Carg23548 vs. TrEMBL
Match: tr|A5C0D8|A5C0D8_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_000011 PE=4 SV=1) HSP 1 Score: 552.7 bits (1423), Expect = 6.1e-154 Identity = 270/338 (79.88%), Postives = 297/338 (87.87%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |