Carg23513 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGATTGAGCTTGTTGTCACGTGCGACTGCTGTGGCCTGAAAGAGGATTGCACCCAATGCTATATCAGTGAAGTTAAGGCCAAATTTGAAGGGAAATGGCTATGTGGGCTCTGTTCTGAAGCTGTGAGAGACGAAGCTAAGCGAAGCAAGAAGCCATTGGTGGGCTTGGAAGAAGCTGTCAATGCCCACATGTCGTTTTGCCGTAAGTTCAAGTCTAACCCTGCCGTTCGTGTTGCTGATGGCATGAGGCTCATGCTTAGGAGGAGGTCCAGCGACATGTCGGCTTCTTCTTCTTCTTCTTCCTCCTCTAAGAAGTATGGGAGATCGGCTAGCTCCTCGCAGGTGGGTTTCGACATGTCGTCTTTGTCGCTCTGCTGATTATATTTTTGGAGACTTTTTAATTAATTAATTAACCAATTAGGGCTTCCCATGCTTTTCTCTCCCTTTTTCTTTATTATTCGAATAATATATAATTTGAAGGCTCTTTCTTTGTACAGAAATCTATGCCCATTTTCTAATTTGCTTTGAAAATATTTTTTCTTTTTATTAGCTAAAAAAA ATGGAGATTGAGCTTGTTGTCACGTGCGACTGCTGTGGCCTGAAAGAGGATTGCACCCAATGCTATATCAGTGAAGTTAAGGCCAAATTTGAAGGGAAATGGCTATGTGGGCTCTGTTCTGAAGCTGTGAGAGACGAAGCTAAGCGAAGCAAGAAGCCATTGGTGGGCTTGGAAGAAGCTGTCAATGCCCACATGTCGTTTTGCCGTAAGTTCAAGTCTAACCCTGCCGTTCGTGTTGCTGATGGCATGAGGCTCATGCTTAGGAGGAGGTCCAGCGACATGTGGGTTTCGACATGTCGTCTTTGTCGCTCTGCTGATTATATTTTTGGAGACTTTTTAATTAATTAATTAACCAATTAGGGCTTCCCATGCTTTTCTCTCCCTTTTTCTTTATTATTCGAATAATATATAATTTGAAGGCTCTTTCTTTGTACAGAAATCTATGCCCATTTTCTAATTTGCTTTGAAAATATTTTTTCTTTTTATTAGCTAAAAAAA ATGGAGATTGAGCTTGTTGTCACGTGCGACTGCTGTGGCCTGAAAGAGGATTGCACCCAATGCTATATCAGTGAAGTTAAGGCCAAATTTGAAGGGAAATGGCTATGTGGGCTCTGTTCTGAAGCTGTGAGAGACGAAGCTAAGCGAAGCAAGAAGCCATTGGTGGGCTTGGAAGAAGCTGTCAATGCCCACATGTCGTTTTGCCGTAAGTTCAAGTCTAACCCTGCCGTTCGTGTTGCTGATGGCATGAGGCTCATGCTTAGGAGGAGGTCCAGCGACATGTGGGTTTCGACATGTCGTCTTTGTCGCTCTGCTGATTATATTTTTGGAGACTTTTTAATTAATTAA MEIELVVTCDCCGLKEDCTQCYISEVKAKFEGKWLCGLCSEAVRDEAKRSKKPLVGLEEAVNAHMSFCRKFKSNPAVRVADGMRLMLRRRSSDMWVSTCRLCRSADYIFGDFLIN
BLAST of Carg23513 vs. NCBI nr
Match: XP_022955973.1 (uncharacterized protein LOC111457807 [Cucurbita moschata]) HSP 1 Score: 182.2 bits (461), Expect = 1.0e-42 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of Carg23513 vs. NCBI nr
Match: XP_022980009.1 (uncharacterized protein LOC111479543 [Cucurbita maxima] >XP_023527200.1 uncharacterized protein LOC111790510 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 182.2 bits (461), Expect = 1.0e-42 Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0
BLAST of Carg23513 vs. NCBI nr
Match: XP_022974390.1 (uncharacterized protein LOC111473071 [Cucurbita maxima] >XP_022975121.1 uncharacterized protein LOC111474099 [Cucurbita maxima]) HSP 1 Score: 177.2 bits (448), Expect = 3.2e-41 Identity = 83/90 (92.22%), Postives = 89/90 (98.89%), Query Frame = 0
BLAST of Carg23513 vs. NCBI nr
Match: XP_023540731.1 (uncharacterized protein LOC111801010 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 177.2 bits (448), Expect = 3.2e-41 Identity = 83/90 (92.22%), Postives = 89/90 (98.89%), Query Frame = 0
BLAST of Carg23513 vs. NCBI nr
Match: XP_022934401.1 (uncharacterized protein LOC111441587 [Cucurbita moschata]) HSP 1 Score: 176.8 bits (447), Expect = 4.2e-41 Identity = 82/90 (91.11%), Postives = 89/90 (98.89%), Query Frame = 0
BLAST of Carg23513 vs. TAIR10
Match: AT4G14819.1 (Protein of unknown function (DUF1677)) HSP 1 Score: 132.9 bits (333), Expect = 1.3e-31 Identity = 68/94 (72.34%), Postives = 74/94 (78.72%), Query Frame = 0
BLAST of Carg23513 vs. TAIR10
Match: AT3G22540.1 (Protein of unknown function (DUF1677)) HSP 1 Score: 126.7 bits (317), Expect = 9.1e-30 Identity = 65/95 (68.42%), Postives = 74/95 (77.89%), Query Frame = 0
BLAST of Carg23513 vs. TAIR10
Match: AT1G72510.1 (Protein of unknown function (DUF1677)) HSP 1 Score: 95.1 bits (235), Expect = 2.9e-20 Identity = 46/88 (52.27%), Postives = 60/88 (68.18%), Query Frame = 0
BLAST of Carg23513 vs. TAIR10
Match: AT1G79770.1 (Protein of unknown function (DUF1677)) HSP 1 Score: 90.9 bits (224), Expect = 5.6e-19 Identity = 45/85 (52.94%), Postives = 58/85 (68.24%), Query Frame = 0
BLAST of Carg23513 vs. TAIR10
Match: AT5G20670.1 (Protein of unknown function (DUF1677)) HSP 1 Score: 81.6 bits (200), Expect = 3.4e-16 Identity = 35/67 (52.24%), Postives = 47/67 (70.15%), Query Frame = 0
BLAST of Carg23513 vs. TrEMBL
Match: tr|A0A1S3AWX5|A0A1S3AWX5_CUCME (uncharacterized protein LOC103483701 OS=Cucumis melo OX=3656 GN=LOC103483701 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 3.1e-40 Identity = 85/87 (97.70%), Postives = 85/87 (97.70%), Query Frame = 0
BLAST of Carg23513 vs. TrEMBL
Match: tr|A0A0A0L4S3|A0A0A0L4S3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G146550 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 3.1e-40 Identity = 85/87 (97.70%), Postives = 85/87 (97.70%), Query Frame = 0
BLAST of Carg23513 vs. TrEMBL
Match: tr|D7T702|D7T702_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_05s0020g03650 PE=4 SV=1) HSP 1 Score: 156.4 bits (394), Expect = 3.9e-35 Identity = 79/94 (84.04%), Postives = 82/94 (87.23%), Query Frame = 0
BLAST of Carg23513 vs. TrEMBL
Match: tr|A0A1U7ZVA7|A0A1U7ZVA7_NELNU (uncharacterized protein LOC104596560 OS=Nelumbo nucifera OX=4432 GN=LOC104596560 PE=4 SV=1) HSP 1 Score: 155.2 bits (391), Expect = 8.7e-35 Identity = 76/94 (80.85%), Postives = 81/94 (86.17%), Query Frame = 0
BLAST of Carg23513 vs. TrEMBL
Match: tr|A0A2P5FWL1|A0A2P5FWL1_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_019310 PE=4 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 2.5e-34 Identity = 74/94 (78.72%), Postives = 82/94 (87.23%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|