Carg23481 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23481
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	CASP-like protein
Location	Cucurbita_argyrosperma_scaffold_196 : 385199 .. 388118 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCGGTGGCAATGGGGTTTTGGGATCAAAGAACTGAAGGGATTCTCAGATCCTTTGCGATCATTGGCTTGGTTTTAACTGTTCTTTTGTTGGGTTTTGATAAGCAAACTACCCAAATCTTTCATATTGACAAGAAGGCCTCTTTCAGAAGTTTGCATGCTTTTGTGTAAGCCCTTTCTCTCTCATTTTTCAAACTCTTTCTCGTTTTCATTCTTGGCCTTTTAGGTTTCGTGTTTTAAAATTTTGATGAACCGGAGATTTGAACTCTGAGATTCCACATCGATTGGAGATGAAAATGAAACACCCTTTATAAGAGTGTGGAAACCTTTCCGTAACAACGCATTTTAAAAACCTTGAGGGGATGTCCGAGAAGGAAAGCCCAAAAAGGACAATATTTGCTAGCCGTGGGCTTGAGCTGTTACGAATAGTATCAGGGTCAGATACCGGACGATATGGCAGGTAGAAGGTTGTAACCTGAAGCGGGTAGACATGAGGCAATGTGTCAGCAAAAACACTGGGTCTCGAAGGGGATGGATTTTGTGGAGGTCTCACATTGACTAAAGAAATGAACGAGTGCCAACGAGGACGCTAGGCTCTGAAAGGCGGTGAATTGTGAGATTCCACATTGGTTGGGGAGGATAATAAAAGGTTGTTCCCCGAAGGAGGTAGACACGAGACGATGTGCCAGTAAGGATGTTGGGTCTCGAGGGGGATTTGGTGGGGTCTCACATCAATTGGAGAAAGGCTTGAGTGCCAGCAAGGACACTGGGTCCTAAAGGGTTGAATTGTGAGGTTCCACATCGATTGGGGAGGAACGAAACACTCTTTACACGAACATCTAAGTTTCAATGATAAATAACAAATGTCAAAAGTTTCATTGGATGACCAATGAAACGAAACTCGTGAAAGAACATTTCTAAGTTAAACTTTCAGAAATCAAATGATTATCGAACCGAATTTAAAGTTATTCAATTTTCTTGCCATTGGTGACAGAGTGATTATGTATGTGGACTCCCTAGCAGCTGCCTACAACATTCTTCAAATCTGCAAATGTTGGATTTCAGCTCAGCCAAAAGGAACATCCAAATTAGGGAGTGGTTCTCATATATGCCTATTTTGGGCTTCTTTCTTGCTTGACCAGGTATGTCTTAATATCTCTTTTACTTATCTTCAAATTTTTAGTACTTCTATTGATAAATTTAGGTCTAAAAATCTCGAATTTTTGTAAGTCAATTATCAAATTTATATAGTTAGTGAGACGAGCGGACTAGACTCGTCTTACAAACTTAGGTTACATGAATCTAATCATCAAACCAAAAGAATTTAAAGATTATCACGAGTTTCTATCTCTTCCTATATTAAATGTAATAGCCTAATCCTACTTAGATATTGTCTGCTTTAATCCATTACGTATAACCGTTAAATTTACCGTCTTTAACAGTAGTAAGGTTCGTAAAAGATTCAAAGAAAAATGTTTTTAATAGCTCTAATTTGGGGTAGATGGACTGTTCCAACCTATGGCTATGGAGGAAAAGGACACCGACAAGTGGACAAGAAACCAGTTGATGTAACTAACAAACATTTAAGAAAGTTCTAAGCTATGTTAGACTTTGAAAACTTTTCATAACCAAATCCAAACATTTAAATTTAATCTCAACATCTTAATATTTTTTCTAATTGTACATAATGTTTAAATTAGTTCATAATACACTTACGAGTATCCTACTTCAGATGAAAAATTAGGTTACTTATTCGAAGAAGATTTATCAGTTTAAAAAAAAATTAAAATTTGAGAGAACAAGAACAAATTAATCAATCTCGAGAAAGTGAAAATCTTGTCTACTTTTAACCATTTGAGCTTAGTCTCAAGATTTTCTTTATTAGTGGGTTCTACCCATAATTATTGAACTCCTTTCCTTTAAACTACAATCTTTCAGACAAAATCATAGCGGAACTAGTTCTCCTTTAACTATTATTGGAAAAGACCTTCTTTGGGGTGTAAGGCGTAAATGTCGACTTGATTTCTAATTCAGAGAGAGAAGTATATTCCTTATGCTCTAGGACATTCATCCATTACTCTCGAGTGTATTTTTCTTGAGCTAATCCTCTTTCAGAAGCTCGAACAGTTTGAGTGTTAGATATAGGATCACGATAGCATTATCAATAGCAGTACTTAGTAAATTCTTATATAATCCTCGAAAGATATGAAATTTTATTGCGATTCATGGGAAAAAAAAAATAGAATTTGACGAGAATATTTTTCATTTAATGAAAATCATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTGACTATTAATACATAAATTATATAGAAACAGGTCAGGAATTTGAATCTTCACTTTTGTCGGGTCCATCTCGAACTCGAGAAAGGACAAAACTTATAACAAATAAATAAAAAGTTGTCTCAACCATGGGTCCAAACCGTCCCAAACATGTTTTATTATGTGCCAACATCCAACTTAAAAAGTGGTTTGAACTGGCATTGACAGGCAGTGGCGTACCTCGTATTTGCCGCAAACACGGCGGGGATGGAGGCGGCGCTTCTGGCGGTGACCGGCGCACATGACTTTCAATGGATGAAGCTCTGCAACAGATTCGAGAGATTCTGCTACCAAGTCGGCGGAGCTTTTCTTTGTGGCTATGGAGCTTTTTTTGCAATGTGTGCCATTTGCGTTATCTCTTCTTTCAACTTGTTTAGGCATTATTCCCCAAACCTTTTCTTTCGACTAAAATCCAACGAGTGAATTGTTCGATATCGACTTCGAGACCTTGTAACTTTACCAAGTCTATGAATTGTATTCATATCTGTATGTCGAAGACATTTGGATCAATACACACTATCTTTATTAAAAATGAGATCTTTTGAATAGGGTTTGAATAGAATAATAAGATATG

mRNA sequence

AGCGGTGGCAATGGGGTTTTGGGATCAAAGAACTGAAGGGATTCTCAGATCCTTTGCGATCATTGGCTTGGTTTTAACTGTTCTTTTGTTGGGTTTTGATAAGCAAACTACCCAAATCTTTCATATTGACAAGAAGGCCTCTTTCAGAAGTTTGCATGCTTTTGTAGTGATTATGTATGTGGACTCCCTAGCAGCTGCCTACAACATTCTTCAAATCTGCAAATGTTGGATTTCAGCTCAGCCAAAAGGAACATCCAAATTAGGGAGTGGTTCTCATATATGCCTATTTTGGGCTTCTTTCTTGCTTGACCAGGCAGTGGCGTACCTCGTATTTGCCGCAAACACGGCGGGGATGGAGGCGGCGCTTCTGGCGGTGACCGGCGCACATGACTTTCAATGGATGAAGCTCTGCAACAGATTCGAGAGATTCTGCTACCAAGTCGGCGGAGCTTTTCTTTGTGGCTATGGAGCTTTTTTTGCAATGTGTGCCATTTGCGTTATCTCTTCTTTCAACTTGTTTAGGCATTATTCCCCAAACCTTTTCTTTCGACTAAAATCCAACGAGTGAATTGTTCGATATCGACTTCGAGACCTTGTAACTTTACCAAGTCTATGAATTGTATTCATATCTGTATGTCGAAGACATTTGGATCAATACACACTATCTTTATTAAAAATGAGATCTTTTGAATAGGGTTTGAATAGAATAATAAGATATG

Coding sequence (CDS)

ATGGGGTTTTGGGATCAAAGAACTGAAGGGATTCTCAGATCCTTTGCGATCATTGGCTTGGTTTTAACTGTTCTTTTGTTGGGTTTTGATAAGCAAACTACCCAAATCTTTCATATTGACAAGAAGGCCTCTTTCAGAAGTTTGCATGCTTTTGTAGTGATTATGTATGTGGACTCCCTAGCAGCTGCCTACAACATTCTTCAAATCTGCAAATGTTGGATTTCAGCTCAGCCAAAAGGAACATCCAAATTAGGGAGTGGTTCTCATATATGCCTATTTTGGGCTTCTTTCTTGCTTGACCAGGCAGTGGCGTACCTCGTATTTGCCGCAAACACGGCGGGGATGGAGGCGGCGCTTCTGGCGGTGACCGGCGCACATGACTTTCAATGGATGAAGCTCTGCAACAGATTCGAGAGATTCTGCTACCAAGTCGGCGGAGCTTTTCTTTGTGGCTATGGAGCTTTTTTTGCAATGTGTGCCATTTGCGTTATCTCTTCTTTCAACTTGTTTAGGCATTATTCCCCAAACCTTTTCTTTCGACTAAAATCCAACGAGTGA

Protein sequence

MGFWDQRTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSLAAAYNILQICKCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALLAVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFFRLKSNE

Homology

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BLAST of Carg23481 vs. NCBI nr
Match: XP_023537147.1 (CASP-like protein 2C1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 379.0 bits (972), Expect = 9.1e-102
Identity = 185/185 (100.00%), Postives = 185/185 (100.00%), Query Frame = 0


Query: 1   MGFWDQRTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60
           MGFWDQRTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL
Sbjct: 1   MGFWDQRTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60

Query: 61  AAAYNILQICKCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120
           AAAYNILQICKCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL
Sbjct: 61  AAAYNILQICKCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120

Query: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFFR 180
           AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFFR
Sbjct: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFFR 180

Query: 181 LKSNE 186
           LKSNE
Sbjct: 181 LKSNE 185

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BLAST of Carg23481 vs. NCBI nr
Match: XP_022938059.1 (CASP-like protein 2C1 [Cucurbita moschata])

HSP 1 Score: 377.1 bits (967), Expect = 3.4e-101
Identity = 184/185 (99.46%), Postives = 184/185 (99.46%), Query Frame = 0


Query: 1   MGFWDQRTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60
           MGFWDQRTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL
Sbjct: 1   MGFWDQRTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60

Query: 61  AAAYNILQICKCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120
           AAAYNILQICKCWISA PKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL
Sbjct: 61  AAAYNILQICKCWISAHPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120

Query: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFFR 180
           AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFFR
Sbjct: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFFR 180

Query: 181 LKSNE 186
           LKSNE
Sbjct: 181 LKSNE 185

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BLAST of Carg23481 vs. NCBI nr
Match: XP_022965970.1 (CASP-like protein 2C1 [Cucurbita maxima])

HSP 1 Score: 373.6 bits (958), Expect = 3.8e-100
Identity = 182/185 (98.38%), Postives = 183/185 (98.92%), Query Frame = 0


Query: 1   MGFWDQRTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60
           MGFWDQ+TEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL
Sbjct: 1   MGFWDQKTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60

Query: 61  AAAYNILQICKCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120
           AAAYNILQIC CWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL
Sbjct: 61  AAAYNILQICNCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120

Query: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFFR 180
           AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHY PNLFFR
Sbjct: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYLPNLFFR 180

Query: 181 LKSNE 186
           LKSNE
Sbjct: 181 LKSNE 185

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BLAST of Carg23481 vs. NCBI nr
Match: XP_004149074.1 (PREDICTED: CASP-like protein 2C1 [Cucumis sativus] >KGN61092.1 hypothetical protein Csa_2G048830 [Cucumis sativus])

HSP 1 Score: 292.7 bits (748), Expect = 8.5e-76
Identity = 143/184 (77.72%), Postives = 157/184 (85.33%), Query Frame = 0


Query: 1   MGFWDQRTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60
           MGF D +TEGILR  AII LVL+VLLLGFDK+T QIFH+DKKASF+SL A V+I+YVDS+
Sbjct: 1   MGFGDVKTEGILRFCAIILLVLSVLLLGFDKETVQIFHVDKKASFKSLRALVIIIYVDSM 60

Query: 61  AAAYNILQICKCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120
           AA YNILQ+CKCWI AQPKG SKLG+  HI LFW SF LDQ  AYL FA+NTAGMEAALL
Sbjct: 61  AAGYNILQLCKCWIFAQPKGISKLGTHFHIYLFWLSFFLDQVAAYLTFASNTAGMEAALL 120

Query: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFFR 180
           AVTGAHDFQWMKLCNRF RFCYQVGGAFLCGY AFFA+  I  IS+FNLFRHYSPN F R
Sbjct: 121 AVTGAHDFQWMKLCNRFHRFCYQVGGAFLCGYAAFFALLLISFISAFNLFRHYSPNHFLR 180

Query: 181 LKSN 185
           LKS+
Sbjct: 181 LKSS 184

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BLAST of Carg23481 vs. NCBI nr
Match: XP_022153293.1 (CASP-like protein 2C1 [Momordica charantia])

HSP 1 Score: 269.2 bits (687), Expect = 1.0e-68
Identity = 133/185 (71.89%), Postives = 155/185 (83.78%), Query Frame = 0


Query: 1   MGFW-DQRTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDS 60
           MGF+ D RTEGILR  AIIGL+LTV LLGFDKQTTQIFH+DKKA+FRSL + +VIMYV+S
Sbjct: 1   MGFFGDPRTEGILRFCAIIGLILTVCLLGFDKQTTQIFHVDKKATFRSLRSLIVIMYVNS 60

Query: 61  LAAAYNILQICKCWISAQPK-GTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAA 120
           +AA YN+LQ+CKCWISAQPK G SKLG+   I +FW SF LDQA+AY++FAANTAG+EAA
Sbjct: 61  VAAGYNLLQLCKCWISAQPKLGASKLGAHYDIYIFWISFFLDQAIAYVIFAANTAGVEAA 120

Query: 121 LLAVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLF 180
           LLA+TGA++ QWMKLCNRF RFC+Q GGAFLCGY A   M AI  IS+FNLF HYSP+ F
Sbjct: 121 LLAITGAYNLQWMKLCNRFTRFCFQAGGAFLCGYAASLTMAAISFISAFNLFTHYSPSHF 180

Query: 181 FRLKS 184
            R KS
Sbjct: 181 LRPKS 185

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BLAST of Carg23481 vs. TAIR10
Match: AT4G25830.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 141.7 bits (356), Expect = 4.4e-34
Identity = 77/179 (43.02%), Postives = 107/179 (59.78%), Query Frame = 0


Query: 6   QRTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSLAAAYN 65
           + TE ILR   +  L+LT  L+G D QT +I +I K  SFR L A    +Y+D + AAYN
Sbjct: 5   RETEVILRLCIVFFLLLTSCLIGLDSQTKEIAYIHKNVSFRYLLALEAELYIDVVVAAYN 64

Query: 66  ILQICKCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALLAVTGA 125
           ++Q+   W + + K ++           W S+LLDQ  AY+VFA  +A  + +LL VTG+
Sbjct: 65  LVQLGLGWYNVEQKTSNPK---------WFSYLLDQTAAYVVFAGTSAAAQHSLLVVTGS 124

Query: 126 HDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFFRLKSN 185
            + QWMK C +F RFC+Q+G A +  Y A   M  +  IS+FNLFR YSP  FFR KS+
Sbjct: 125 RELQWMKWCYKFTRFCFQMGSAIILNYIAAALMVLLSSISAFNLFRLYSPKRFFRFKSS 174

[Close]

BLAST of Carg23481 vs. TAIR10
Match: AT2G35760.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 100.5 bits (249), Expect = 1.1e-21
Identity = 61/166 (36.75%), Postives = 86/166 (51.81%), Query Frame = 0


Query: 8   TEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSLAAAYNIL 67
           TE ILR    +  ++  +L+  D Q  +IF I KKA F  + A V+++ V+ +AA Y+++
Sbjct: 30  TELILRCLVCVLALVAAILIATDVQVREIFMIQKKAKFTDMKALVLLVVVNGIAAGYSLV 89

Query: 68  QICKCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALLAVTGAHD 127
           Q  +C +    KG           L WA F  DQAVAYL  A   A  ++A  A  G  +
Sbjct: 90  QAVRCVVGLM-KGRVLFSKP----LAWAIFFGDQAVAYLCVAGVAAAAQSAAFAKLGEPE 149

Query: 128 FQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHY 174
            QWMK+CN + +FC QVG        A   M  I  IS+F +FR Y
Sbjct: 150 LQWMKICNMYGKFCNQVGEGIASALFACIGMVLISCISAFGVFRLY 190

[Close]

BLAST of Carg23481 vs. TAIR10
Match: AT4G16442.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 85.5 bits (210), Expect = 3.8e-17
Identity = 57/166 (34.34%), Postives = 86/166 (51.81%), Query Frame = 0


Query: 8   TEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSLAAAYNIL 67
           TE +LR    +  +L ++L+  D +   IF I K A +  + A V ++  + +AA Y++L
Sbjct: 11  TELLLRCSISVFALLALILVVTDTEVKLIFTIKKTAKYTDMKAVVFLVVANGIAAVYSLL 70

Query: 68  QICKCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALLAVTGAHD 127
           Q  +C +     GT K        L WA F  DQA+AYL  AA  A  E+ ++A  G  D
Sbjct: 71  QSVRCVV-----GTMKGKVLFSKPLAWAFFSGDQAMAYLNVAAIAATAESGVIAREGEED 130

Query: 128 FQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHY 174
            QWM++C  + +FC Q+         A  AM  +  IS+F+LFR Y
Sbjct: 131 LQWMRVCTMYGKFCNQMAIGVSSALLASIAMVFVSCISAFSLFRLY 171

[Close]

BLAST of Carg23481 vs. TAIR10
Match: AT4G15610.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 46.2 bits (108), Expect = 2.5e-05
Identity = 42/172 (24.42%), Postives = 76/172 (44.19%), Query Frame = 0


Query: 8   TEGILRSFAIIGLVLTVLLLGFDKQTTQIFHID-----KKASFRSLHAFVVIMYVDSLAA 67
           T+ +LR       + +++++   KQT  IF          A F +  A +  +   S+A 
Sbjct: 29  TQVVLRFVLFAATLTSIVVMVTSKQTKNIFLPGTPIRIPAAEFTNSPALIYFVVALSVAC 88

Query: 68  AYNILQICKCWISAQPKGTSKLGSGSHIC---LFWASFLLDQAVAYLVFAANTAGMEAAL 127
            Y+I+      +SA  K         H C   L     ++D  +  +V +A  AG   A 
Sbjct: 89  FYSIVSTF-VTVSAFKK---------HSCSAVLLLNLAIMDAVMVGIVASATGAGGGVAY 148

Query: 128 LAVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFR 172
           L + G  + +W K+C+ +++FC  VGGA      A   +  + +IS  +L++
Sbjct: 149 LGLKGNKEVRWGKICHIYDKFCRHVGGAIAVSLFASVVLLLLSIISVLSLYK 190

[Close]

BLAST of Carg23481 vs. Swiss-Prot
Match: sp|B9IM09|CSPLG_POPTR (CASP-like protein 2C1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_578614 PE=3 SV=2)

HSP 1 Score: 181.4 bits (459), Expect = 9.1e-45
Identity = 92/176 (52.27%), Postives = 121/176 (68.75%), Query Frame = 0


Query: 7   RTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSLAAAYNI 66
           + E ILR  AI+ LV T  L+G D QT  +   +K+ +++ LHA VV++YVD++AAAYN+
Sbjct: 7   KIEAILRGIAILLLVSTACLVGLDSQTKFVIVYEKEVTYKDLHALVVLVYVDAVAAAYNL 66

Query: 67  LQICKCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALLAVTGAH 126
           LQ+C+C +SA  KG  K   GS+  L WA F+LDQ  AY  FAA++A ++ ++L +TGA 
Sbjct: 67  LQLCRCSVSALSKGNFK---GSYRYLSWACFVLDQLAAYTTFAAHSAALQHSVLGITGAK 126

Query: 127 DFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFFRLK 183
            FQWMK CNRF RFC+Q+GGA  CGY A   M  I  IS+FNLFR YSP  F RLK
Sbjct: 127 VFQWMKWCNRFTRFCFQIGGALTCGYIASVLMVMISFISAFNLFRLYSPKHFLRLK 179

[Close]

BLAST of Carg23481 vs. Swiss-Prot
Match: sp|Q5K4H9|CSPL2_GOSHI (CASP-like protein XL3 OS=Gossypium hirsutum OX=3635 GN=XL3 PE=2 SV=1)

HSP 1 Score: 174.5 bits (441), Expect = 1.1e-42
Identity = 89/177 (50.28%), Postives = 117/177 (66.10%), Query Frame = 0


Query: 6   QRTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSLAAAYN 65
           Q+ E ++R   I+ LVLT  L+G D QT  IF++ KKASF+ L A V ++Y+ SLAAAYN
Sbjct: 6   QKIEALIRLSTIVMLVLTACLIGLDSQTKVIFYVQKKASFKDLRALVGLLYITSLAAAYN 65

Query: 66  ILQICKCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALLAVTGA 125
           +LQ+C    SA  KGTS     S+  L W  ++LDQAV Y VFA N A +E + L +TG 
Sbjct: 66  LLQLCCSSFSASYKGTS---LQSYAYLAWLRYILDQAVVYAVFAGNLAALEHSFLVLTGE 125

Query: 126 HDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFFRLK 183
            +FQW+K CN++ RFC Q+GG+ LCG+ A   M +I  IS+FNLFR YSP  F  LK
Sbjct: 126 ENFQWLKWCNKYTRFCTQIGGSLLCGFVASLLMFSIASISAFNLFRQYSPTKFMHLK 179

[Close]

BLAST of Carg23481 vs. Swiss-Prot
Match: sp|A7Q6G6|CSPL9_VITVI (CASP-like protein 2C1 OS=Vitis vinifera OX=29760 GN=VIT_11s0052g01140 PE=2 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.5e-42
Identity = 96/177 (54.24%), Postives = 122/177 (68.93%), Query Frame = 0


Query: 7   RTEGILRSFAIIGLVLTVLLLGFDKQTTQIFH-IDKKASFRSLHAFVVIMYVDSLAAAYN 66
           R E  LR FAI+ LVLT  LLGFD QT  +F  I K A+FR L A  V++YVDS+AA YN
Sbjct: 30  RAEAFLRLFAILVLVLTACLLGFDTQTKLLFSTIKKTATFRDLGALQVVVYVDSVAAGYN 89

Query: 67  ILQICKCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALLAVTGA 126
           +LQ+ + +ISA+ KG  KL + S++ L W  FLLDQA  Y VF+ANTA ++A+++AVTG 
Sbjct: 90  LLQLGRGFISAKLKG--KLINVSYVTLPWVCFLLDQAAVYTVFSANTAALQASIIAVTGE 149

Query: 127 HDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFFRLK 183
              QWMK+CNR+ RFC QVGGA L GY A   M  +  +S+F+LFR YSP  F  LK
Sbjct: 150 SSLQWMKVCNRYTRFCIQVGGALLSGYLASLLMVLLSSLSAFSLFRLYSPKQFHLLK 204

[Close]

BLAST of Carg23481 vs. Swiss-Prot
Match: sp|C6SZ04|CSPL3_SOYBN (CASP-like protein 2C1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 6.3e-38
Identity = 84/178 (47.19%), Postives = 116/178 (65.17%), Query Frame = 0


Query: 7   RTEGILRSFAIIGLVLTVLLLGFDKQTTQIF-HIDKKASFRSLHAFVVIMYVDSLAAAYN 66
           R E  LR  AI+ LVLT  L+  D QT  +F  I+KKA+++ L+A  +++YV   AA YN
Sbjct: 7   RGEVCLRVSAILVLVLTACLVALDTQTKVVFVSIEKKATYKDLNALKILVYVTCAAAGYN 66

Query: 67  ILQICKCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALLAVTGA 126
           +L +CK  I ++     K   GS++C+ W  F LDQ   Y+ FAANTA M AA+LA++G+
Sbjct: 67  LLLLCKHSIWSR-----KNFKGSYLCMAWICFSLDQIAVYMTFAANTATMGAAVLAISGS 126

Query: 127 HDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFFRLKS 184
             FQW+K+C++F RFC ++GGA LCGY A   M  I  IS++ +FR YSP  F RLKS
Sbjct: 127 EAFQWLKVCDKFTRFCVEIGGALLCGYAASMLMALISTISAYKVFRMYSPKWFLRLKS 179

[Close]

BLAST of Carg23481 vs. Swiss-Prot
Match: sp|Q8L8U9|CSPLS_ARATH (CASP-like protein 2C1 OS=Arabidopsis thaliana OX=3702 GN=At4g25830 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 8.0e-33
Identity = 77/179 (43.02%), Postives = 107/179 (59.78%), Query Frame = 0


Query: 6   QRTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSLAAAYN 65
           + TE ILR   +  L+LT  L+G D QT +I +I K  SFR L A    +Y+D + AAYN
Sbjct: 5   RETEVILRLCIVFFLLLTSCLIGLDSQTKEIAYIHKNVSFRYLLALEAELYIDVVVAAYN 64

Query: 66  ILQICKCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALLAVTGA 125
           ++Q+   W + + K ++           W S+LLDQ  AY+VFA  +A  + +LL VTG+
Sbjct: 65  LVQLGLGWYNVEQKTSNPK---------WFSYLLDQTAAYVVFAGTSAAAQHSLLVVTGS 124

Query: 126 HDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFFRLKSN 185
            + QWMK C +F RFC+Q+G A +  Y A   M  +  IS+FNLFR YSP  FFR KS+
Sbjct: 125 RELQWMKWCYKFTRFCFQMGSAIILNYIAAALMVLLSSISAFNLFRLYSPKRFFRFKSS 174

[Close]

BLAST of Carg23481 vs. TrEMBL
Match: tr|A0A0A0LK62|A0A0A0LK62_CUCSA (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G048830 PE=3 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 5.6e-76
Identity = 143/184 (77.72%), Postives = 157/184 (85.33%), Query Frame = 0


Query: 1   MGFWDQRTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSL 60
           MGF D +TEGILR  AII LVL+VLLLGFDK+T QIFH+DKKASF+SL A V+I+YVDS+
Sbjct: 1   MGFGDVKTEGILRFCAIILLVLSVLLLGFDKETVQIFHVDKKASFKSLRALVIIIYVDSM 60

Query: 61  AAAYNILQICKCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALL 120
           AA YNILQ+CKCWI AQPKG SKLG+  HI LFW SF LDQ  AYL FA+NTAGMEAALL
Sbjct: 61  AAGYNILQLCKCWIFAQPKGISKLGTHFHIYLFWLSFFLDQVAAYLTFASNTAGMEAALL 120

Query: 121 AVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFFR 180
           AVTGAHDFQWMKLCNRF RFCYQVGGAFLCGY AFFA+  I  IS+FNLFRHYSPN F R
Sbjct: 121 AVTGAHDFQWMKLCNRFHRFCYQVGGAFLCGYAAFFALLLISFISAFNLFRHYSPNHFLR 180

Query: 181 LKSN 185
           LKS+
Sbjct: 181 LKSS 184

[Close]

BLAST of Carg23481 vs. TrEMBL
Match: tr|A0A1S4E0F6|A0A1S4E0F6_CUCME (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103493354 PE=3 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 7.0e-50
Identity = 97/125 (77.60%), Postives = 105/125 (84.00%), Query Frame = 0


Query: 60  LAAAYNILQICKCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAAL 119
           L++ YNILQ+CKCWI AQPKG SKLG+  HI LFW SF LDQ  AYL FA+NTAGMEAA 
Sbjct: 13  LSSGYNILQLCKCWIFAQPKGISKLGTHFHIYLFWLSFFLDQVAAYLTFASNTAGMEAAF 72

Query: 120 LAVTGAHDFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFF 179
           LAVTGAHDFQWMKLCNRF RFCYQVGGAFLCGY AFFA+  I  IS+FNLFRHYSPN F 
Sbjct: 73  LAVTGAHDFQWMKLCNRFHRFCYQVGGAFLCGYAAFFALLLISFISAFNLFRHYSPNHFL 132

Query: 180 RLKSN 185
           RLKS+
Sbjct: 133 RLKSS 137

[Close]

BLAST of Carg23481 vs. TrEMBL
Match: tr|A0A2P4LIW1|A0A2P4LIW1_QUESU (CASP-like protein OS=Quercus suber OX=58331 GN=CFP56_05789 PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 8.2e-43
Identity = 92/166 (55.42%), Postives = 118/166 (71.08%), Query Frame = 0


Query: 17  IIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSLAAAYNILQICKCWISA 76
           ++  VLT  L+G D QT  IF I +KA++R L AF +++YVDS AA YN+LQ+CK  ISA
Sbjct: 9   VLSFVLTACLVGLDAQTKIIFFIARKATYRDLEAFRILLYVDSAAAGYNLLQLCKGLISA 68

Query: 77  QPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALLAVTGAHDFQWMKLCNR 136
             +G  K   G++I + W  FLLDQ  AY+ FAAN+A +EAA+LAVTGA +FQW+KLCNR
Sbjct: 69  WFEGNLK---GAYIYISWIVFLLDQLAAYITFAANSAALEAAVLAVTGAEEFQWIKLCNR 128

Query: 137 FERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFFRLK 183
           F RFC+Q+GGA  CGY A   M  I  IS++NLFR+YSP  F  LK
Sbjct: 129 FTRFCFQIGGALFCGYVASILMALISFISAYNLFRNYSPKRFLHLK 171

[Close]

BLAST of Carg23481 vs. TrEMBL
Match: tr|A0A2K1WYG4|A0A2K1WYG4_POPTR (CASP-like protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G094500v3 PE=3 SV=1)

HSP 1 Score: 181.4 bits (459), Expect = 1.8e-42
Identity = 92/176 (52.27%), Postives = 121/176 (68.75%), Query Frame = 0


Query: 7   RTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSLAAAYNI 66
           + E ILR  AI+ LV T  L+G D QT  +   +K+ +++ LHA VV++YVD++AAAYN+
Sbjct: 7   KIEAILRGIAILLLVSTACLVGLDSQTKFVIVYEKEVTYKDLHALVVLVYVDAVAAAYNL 66

Query: 67  LQICKCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALLAVTGAH 126
           LQ+C+C +SA  KG  K   GS+  L WA F+LDQ  AY  FAA++A ++ ++L +TGA 
Sbjct: 67  LQLCRCSVSALSKGNFK---GSYRYLSWACFVLDQLAAYTTFAAHSAALQHSVLGITGAK 126

Query: 127 DFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFFRLK 183
            FQWMK CNRF RFC+Q+GGA  CGY A   M  I  IS+FNLFR YSP  F RLK
Sbjct: 127 VFQWMKWCNRFTRFCFQIGGALTCGYIASVLMVMISFISAFNLFRLYSPKHFLRLK 179

[Close]

BLAST of Carg23481 vs. TrEMBL
Match: tr|M5XGU4|M5XGU4_PRUPE (CASP-like protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa014614mg PE=3 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 7.7e-41
Identity = 92/176 (52.27%), Postives = 119/176 (67.61%), Query Frame = 0


Query: 7   RTEGILRSFAIIGLVLTVLLLGFDKQTTQIFHIDKKASFRSLHAFVVIMYVDSLAAAYNI 66
           +TE  LR  A++ LVLT  L+GFD QT  +  I +KA+FR L +  V++YV S+AA YN+
Sbjct: 5   KTEAFLRLCAVLVLVLTACLVGFDSQTKYLIFIYRKATFRDLKSLSVLVYVVSVAAGYNL 64

Query: 67  LQICKCWISAQPKGTSKLGSGSHICLFWASFLLDQAVAYLVFAANTAGMEAALLAVTGAH 126
           LQ+ KC  SA  K   K   GS+I + W  FLLDQ   Y+ F AN+A +EA++LA+ GA 
Sbjct: 65  LQLGKCSKSAWCKENLK---GSNIYVAWLCFLLDQVAVYVTFGANSAALEASVLAIKGAQ 124

Query: 127 DFQWMKLCNRFERFCYQVGGAFLCGYGAFFAMCAICVISSFNLFRHYSPNLFFRLK 183
           DFQWMKLCN++ RFC+Q+GGA  CGY A   M  I +IS+FNLFR YSP  F  LK
Sbjct: 125 DFQWMKLCNKYTRFCFQIGGALACGYVACILMAWISLISAFNLFRLYSPKQFLLLK 177

The following BLAST results are available for this feature:

BLAST of Carg23481 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023537147.1	9.1e-102	100.00	CASP-like protein 2C1 [Cucurbita pepo subsp. pepo]	[more]
XP_022938059.1	3.4e-101	99.46	CASP-like protein 2C1 [Cucurbita moschata]	[more]
XP_022965970.1	3.8e-100	98.38	CASP-like protein 2C1 [Cucurbita maxima]	[more]
XP_004149074.1	8.5e-76	77.72	PREDICTED: CASP-like protein 2C1 [Cucumis sativus] >KGN61092.1 hypothetical prot...	[more]
XP_022153293.1	1.0e-68	71.89	CASP-like protein 2C1 [Momordica charantia]	[more]

BLAST of Carg23481 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G25830.1	4.4e-34	43.02	Uncharacterised protein family (UPF0497)	[more]
AT2G35760.1	1.1e-21	36.75	Uncharacterised protein family (UPF0497)	[more]
AT4G16442.1	3.8e-17	34.34	Uncharacterised protein family (UPF0497)	[more]
AT4G15610.1	2.5e-05	24.42	Uncharacterised protein family (UPF0497)	[more]

BLAST of Carg23481 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|B9IM09\|CSPLG_POPTR	9.1e-45	52.27	CASP-like protein 2C1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_578614 PE=3 S...	[more]
sp\|Q5K4H9\|CSPL2_GOSHI	1.1e-42	50.28	CASP-like protein XL3 OS=Gossypium hirsutum OX=3635 GN=XL3 PE=2 SV=1	[more]
sp\|A7Q6G6\|CSPL9_VITVI	2.5e-42	54.24	CASP-like protein 2C1 OS=Vitis vinifera OX=29760 GN=VIT_11s0052g01140 PE=2 SV=1	[more]
sp\|C6SZ04\|CSPL3_SOYBN	6.3e-38	47.19	CASP-like protein 2C1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
sp\|Q8L8U9\|CSPLS_ARATH	8.0e-33	43.02	CASP-like protein 2C1 OS=Arabidopsis thaliana OX=3702 GN=At4g25830 PE=2 SV=1	[more]

BLAST of Carg23481 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LK62\|A0A0A0LK62_CUCSA	5.6e-76	77.72	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G048830 PE=3 SV=1	[more]
tr\|A0A1S4E0F6\|A0A1S4E0F6_CUCME	7.0e-50	77.60	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103493354 PE=3 SV=1	[more]
tr\|A0A2P4LIW1\|A0A2P4LIW1_QUESU	8.2e-43	55.42	CASP-like protein OS=Quercus suber OX=58331 GN=CFP56_05789 PE=3 SV=1	[more]
tr\|A0A2K1WYG4\|A0A2K1WYG4_POPTR	1.8e-42	52.27	CASP-like protein OS=Populus trichocarpa OX=3694 GN=POPTR_018G094500v3 PE=3 SV=1	[more]
tr\|M5XGU4\|M5XGU4_PRUPE	7.7e-41	52.27	CASP-like protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa014614mg PE=3...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006459	CASP/CASPL
IPR006702	CASP_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23481-RA	Carg23481-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 8..157 e-value: 1.8E-31 score: 108.9
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 11..168 e-value: 3.4E-23 score: 80.2
None	No IPR available	PANTHER	PTHR11615:SF161	CASP-LIKE PROTEIN 2C1	coord: 6..183
None	No IPR available	PANTHER	PTHR11615	NITRATE, FROMATE, IRON DEHYDROGENASE	coord: 6..183

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23481	MELO3C004090	Melon (DHL92) v3.5.1	carmeB0488
Carg23481	Cucsa.089750	Cucumber (Gy14) v1	carcgyB0553
Carg23481	CmaCh12G009990	Cucurbita maxima (Rimu)	carcmaB0670
Carg23481	CmoCh12G010090	Cucurbita moschata (Rifu)	carcmoB0652
Carg23481	Cp4.1LG07g08430	Cucurbita pepo (Zucchini)	carcpeB0676
Carg23481	CsGy2G005750	Cucumber (Gy14) v2	carcgybB0491
Carg23481	MELO3C004090.2	Melon (DHL92) v3.6.1	carmedB0494
Carg23481	CsaV3_2G007950	Cucumber (Chinese Long) v3	carcucB0520
Carg23481	Cla97C11G218420	Watermelon (97103) v2	carwmbB0506
Carg23481	Bhi06G001172	Wax gourd	carwgoB0586

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None