Carg23479 (gene) Silver-seed gourd

Overview
NameCarg23479
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionRING-H2 finger protein ATL13
LocationCucurbita_argyrosperma_scaffold_196 : 373936 .. 375120 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCATTCTCTCAAACCCCATTTCTCCGCCGCCTCCACCGCCGCCGGATTTCAACTTTGACAACCAAGTAAGCCCCACAATTCTCATAGCCATAATCATCCTCTCCATTATCCTCTTCTTCTCCGCCCTCCTCCTCCTCCTTCTCCGATTCTTCCTCAAGCCCCAAATCAGAACAGATCCCGAAGATTCCGCCGGCGGCACGGCGGTTGACGGCGGCGCCTCTGCTTTCCAAGGCCAACTCCAGCAGCTCTTCCACCTCCACGACGCCGGCGTCGACCAATCCTTCATCGATACCCTCCCTGTTTTTCTCTACAAAGCCATAATCGGCCTGAAATTAGACCCTTTTGATTGCTCTGTTTGTCTCTGTGAATTTCAACCCAATGATAAACTCCGATTGTTGACCAAATGCAGCCATGCTTTTCATATGGAGTGTATCGACACGTGGCTTCTTTCCCACTCTACATGTCCCCTCTGCCGTGCCGGCTTGATTTCAGATGTCGGATTCCCCTCCAAAATTGTTGGAGTTCTTGACTCTGTAACTCATAGCTCCAGAGAAATTGGGGAAATTCAAACCGGTTCCTTTCTGGGTTTTCTTGGGGATGCGTTGGATTTTGCTGAAACGAAGCCAGATGAGCCGCCGCCGCCGCCGCCGCCGGCGGAGCAGACGGTGGTTCCTATAAAATTGGGGAAGTTTAAAAGCTTGGAGAGTAATGGAGAAGGGAGTAGCAATAATGGGAAAGTTGATTCGAGAAGGTGTTTTTCAATGGGGTCATTTGGGTATGTAATGGATGAGAATTCGTCTCTGCAAGTTCCGATCAGGACGCCGGCAGTGAGGAAACCGGCCAGGAAGAAGAGGAATCTGCCATTGATGCCGGGGAGTCTAGCGGCGATGTCGGAGTGCGACTGCGAATCAAGGCGAGAGTTTAATTTTACGGAATTGAATGAGAAAGTTGAGAGCTTTGTCGAAGAGAAGGTGGGCGGCGCGAACCAAGCCGGATCGGAAAATGGGATGGGAATGACGGAGGAAGAGAATGGAAGGAGAAATAGTTCGGAATTTGTTGAGAATCGGCGGTCGTTTGTGAGGAGGACGTTGCAGTGGGTGATGGGGAAGAACACGAAGAACAGTAGGATTGTTCATTCATCTTTTTCAACCAATGATGATCACTCTGATTGTTCTGTGTGA

mRNA sequence

ATGGCCATTCTCTCAAACCCCATTTCTCCGCCGCCTCCACCGCCGCCGGATTTCAACTTTGACAACCAAGTAAGCCCCACAATTCTCATAGCCATAATCATCCTCTCCATTATCCTCTTCTTCTCCGCCCTCCTCCTCCTCCTTCTCCGATTCTTCCTCAAGCCCCAAATCAGAACAGATCCCGAAGATTCCGCCGGCGGCACGGCGGTTGACGGCGGCGCCTCTGCTTTCCAAGGCCAACTCCAGCAGCTCTTCCACCTCCACGACGCCGGCGTCGACCAATCCTTCATCGATACCCTCCCTGTTTTTCTCTACAAAGCCATAATCGGCCTGAAATTAGACCCTTTTGATTGCTCTGTTTGTCTCTGTGAATTTCAACCCAATGATAAACTCCGATTGTTGACCAAATGCAGCCATGCTTTTCATATGGAGTGTATCGACACGTGGCTTCTTTCCCACTCTACATGTCCCCTCTGCCGTGCCGGCTTGATTTCAGATGTCGGATTCCCCTCCAAAATTGTTGGAGTTCTTGACTCTGTAACTCATAGCTCCAGAGAAATTGGGGAAATTCAAACCGGTTCCTTTCTGGGTTTTCTTGGGGATGCGTTGGATTTTGCTGAAACGAAGCCAGATGAGCCGCCGCCGCCGCCGCCGCCGGCGGAGCAGACGGTGGTTCCTATAAAATTGGGGAAGTTTAAAAGCTTGGAGAGTAATGGAGAAGGGAGTAGCAATAATGGGAAAGTTGATTCGAGAAGGTGTTTTTCAATGGGGTCATTTGGGTATGTAATGGATGAGAATTCGTCTCTGCAAGTTCCGATCAGGACGCCGGCAGTGAGGAAACCGGCCAGGAAGAAGAGGAATCTGCCATTGATGCCGGGGAGTCTAGCGGCGATGTCGGAGTGCGACTGCGAATCAAGGCGAGAGTTTAATTTTACGGAATTGAATGAGAAAGTTGAGAGCTTTGTCGAAGAGAAGGTGGGCGGCGCGAACCAAGCCGGATCGGAAAATGGGATGGGAATGACGGAGGAAGAGAATGGAAGGAGAAATAGTTCGGAATTTGTTGAGAATCGGCGGTCGTTTGTGAGGAGGACGTTGCAGTGGGTGATGGGGAAGAACACGAAGAACAGTAGGATTGTTCATTCATCTTTTTCAACCAATGATGATCACTCTGATTGTTCTGTGTGA

Coding sequence (CDS)

ATGGCCATTCTCTCAAACCCCATTTCTCCGCCGCCTCCACCGCCGCCGGATTTCAACTTTGACAACCAAGTAAGCCCCACAATTCTCATAGCCATAATCATCCTCTCCATTATCCTCTTCTTCTCCGCCCTCCTCCTCCTCCTTCTCCGATTCTTCCTCAAGCCCCAAATCAGAACAGATCCCGAAGATTCCGCCGGCGGCACGGCGGTTGACGGCGGCGCCTCTGCTTTCCAAGGCCAACTCCAGCAGCTCTTCCACCTCCACGACGCCGGCGTCGACCAATCCTTCATCGATACCCTCCCTGTTTTTCTCTACAAAGCCATAATCGGCCTGAAATTAGACCCTTTTGATTGCTCTGTTTGTCTCTGTGAATTTCAACCCAATGATAAACTCCGATTGTTGACCAAATGCAGCCATGCTTTTCATATGGAGTGTATCGACACGTGGCTTCTTTCCCACTCTACATGTCCCCTCTGCCGTGCCGGCTTGATTTCAGATGTCGGATTCCCCTCCAAAATTGTTGGAGTTCTTGACTCTGTAACTCATAGCTCCAGAGAAATTGGGGAAATTCAAACCGGTTCCTTTCTGGGTTTTCTTGGGGATGCGTTGGATTTTGCTGAAACGAAGCCAGATGAGCCGCCGCCGCCGCCGCCGCCGGCGGAGCAGACGGTGGTTCCTATAAAATTGGGGAAGTTTAAAAGCTTGGAGAGTAATGGAGAAGGGAGTAGCAATAATGGGAAAGTTGATTCGAGAAGGTGTTTTTCAATGGGGTCATTTGGGTATGTAATGGATGAGAATTCGTCTCTGCAAGTTCCGATCAGGACGCCGGCAGTGAGGAAACCGGCCAGGAAGAAGAGGAATCTGCCATTGATGCCGGGGAGTCTAGCGGCGATGTCGGAGTGCGACTGCGAATCAAGGCGAGAGTTTAATTTTACGGAATTGAATGAGAAAGTTGAGAGCTTTGTCGAAGAGAAGGTGGGCGGCGCGAACCAAGCCGGATCGGAAAATGGGATGGGAATGACGGAGGAAGAGAATGGAAGGAGAAATAGTTCGGAATTTGTTGAGAATCGGCGGTCGTTTGTGAGGAGGACGTTGCAGTGGGTGATGGGGAAGAACACGAAGAACAGTAGGATTGTTCATTCATCTTTTTCAACCAATGATGATCACTCTGATTGTTCTGTGTGA

Protein sequence

MAILSNPISPPPPPPPDFNFDNQVSPTILIAIIILSIILFFSALLLLLLRFFLKPQIRTDPEDSAGGTAVDGGASAFQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLCEFQPNDKLRLLTKCSHAFHMECIDTWLLSHSTCPLCRAGLISDVGFPSKIVGVLDSVTHSSREIGEIQTGSFLGFLGDALDFAETKPDEPPPPPPPAEQTVVPIKLGKFKSLESNGEGSSNNGKVDSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKPARKKRNLPLMPGSLAAMSECDCESRREFNFTELNEKVESFVEEKVGGANQAGSENGMGMTEEENGRRNSSEFVENRRSFVRRTLQWVMGKNTKNSRIVHSSFSTNDDHSDCSV
Homology
[Close]
BLAST of Carg23479 vs. NCBI nr
Match: XP_022938053.1 (RING-H2 finger protein ATL13-like [Cucurbita moschata])

HSP 1 Score: 640.6 bits (1651), Expect = 3.6e-180
Identity = 333/341 (97.65%), Postives = 335/341 (98.24%), Query Frame = 0 

Query: 54  KPQIRTDPEDSAGGTAVDGGASAFQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL 113
           KPQIRTDPEDSAGGTAVDGGASAFQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL
Sbjct: 54  KPQIRTDPEDSAGGTAVDGGASAFQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL 113

Query: 114 DPFDCSVCLCEFQPNDKLRLLTKCSHAFHMECIDTWLLSHSTCPLCRAGLISDVGFPSKI 173
           DPFDCSVCLCEFQPNDKLRLLTKCSHAFHMECIDTWLLSHSTCPLCRAGLISDVGFPSKI
Sbjct: 114 DPFDCSVCLCEFQPNDKLRLLTKCSHAFHMECIDTWLLSHSTCPLCRAGLISDVGFPSKI 173

Query: 174 VGVLDSVTHSSREIGEIQTGSFLGFLGDALDFAETKPXXXXXXXXXXXXXVVPIKLGKFK 233
           VGVLDSV+HSSREIGEIQTGSFLGFLGD LDFAE KP  XXXXXXXXXXXVVPIKLGKFK
Sbjct: 174 VGVLDSVSHSSREIGEIQTGSFLGFLGDVLDFAEMKP--XXXXXXXXXXXVVPIKLGKFK 233

Query: 234 SLESNGEGSSNNGKVDSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKPARKKRNLPLMPG 293
           SLESNGEGSSNNGKVDSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKPAR KRNLPLMPG
Sbjct: 234 SLESNGEGSSNNGKVDSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKPARNKRNLPLMPG 293

Query: 294 SLAAMSECDCESRREFNFTELNEKVESFVEEKVGGANQAGSENGMGMTEEENGRRNSSEF 353
           SLAAMSECDCESRREFNF ELNEKVESFVEEKVGGAN+AGSENGMGMTEEENGRRNSSEF
Sbjct: 294 SLAAMSECDCESRREFNFMELNEKVESFVEEKVGGANRAGSENGMGMTEEENGRRNSSEF 353

Query: 354 VENRRSFVRRTLQWVMGKNTKNSRIVHSSFSTNDDHSDCSV 395
           VENRRSFVRRTLQWVMGKNTKNSRIVHSSFSTNDDHSDCSV
Sbjct: 354 VENRRSFVRRTLQWVMGKNTKNSRIVHSSFSTNDDHSDCSV 392

[Close]
BLAST of Carg23479 vs. NCBI nr
Match: XP_022965405.1 (RING-H2 finger protein ATL13-like [Cucurbita maxima])

HSP 1 Score: 597.0 bits (1538), Expect = 4.5e-167
Identity = 319/350 (91.14%), Postives = 323/350 (92.29%), Query Frame = 0 

Query: 54  KPQIRTDPEDSAGGTAVDGGASAFQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL 113
           K QIRTDPED+AG     GGASAFQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL
Sbjct: 58  KAQIRTDPEDTAG-----GGASAFQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL 117

Query: 114 DPFDCSVCLCEFQPNDKLRLLTKCSHAFHMECIDTWLLSHSTCPLCRAGLISDVGFPSKI 173
           DPFDCSVCLCEFQPNDKLRLLTKCSHAFHMECIDTWLLSHSTCPLCRAGLISDVGFPSKI
Sbjct: 118 DPFDCSVCLCEFQPNDKLRLLTKCSHAFHMECIDTWLLSHSTCPLCRAGLISDVGFPSKI 177

Query: 174 VGVLDSVTHSSREIGEIQTGSFLGFLGDALDFAETKPXXXXXXXXXXXXXVVPIKLGKFK 233
           VGVLDSV+HSSREIGEIQTGSFLGFLGD LDFAE KP XXXXXXXXXXXXVVPIKLGKFK
Sbjct: 178 VGVLDSVSHSSREIGEIQTGSFLGFLGDVLDFAEMKPDXXXXXXXXXXXXVVPIKLGKFK 237

Query: 234 SLESNGEGSSNNGKVDSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKPARKKRNLPLMPG 293
           SLESNGEGSSNNGKVDSRRCFSMGSFGYVMDENSSLQVPIRTPAVRK ARKKRNLPLMPG
Sbjct: 238 SLESNGEGSSNNGKVDSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKAARKKRNLPLMPG 297

Query: 294 SLAAMSECDCESRREFNFTELNEKV---------ESFVEEKVGGANQAGSENGMGMTEEE 353
           SLAAMSECDCESRREFNFTELNEKV         ESFVEEKVGG NQ  SENGMGM EEE
Sbjct: 298 SLAAMSECDCESRREFNFTELNEKVESFRHGSLKESFVEEKVGGTNQPRSENGMGMAEEE 357

Query: 354 NGRRNSSEFVENRRSFVRRTLQWVMGKNTKNSRIVHSSFSTNDDHSDCSV 395
             RRNS E VENRRSFVRRTLQWV+GKNTKNSRIVHSSFSTNDDH+DCSV
Sbjct: 358 YRRRNSLECVENRRSFVRRTLQWVIGKNTKNSRIVHSSFSTNDDHADCSV 402

[Close]
BLAST of Carg23479 vs. NCBI nr
Match: XP_023538250.1 (RING-H2 finger protein ATL13-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 592.8 bits (1527), Expect = 8.5e-166
Identity = 318/353 (90.08%), Postives = 321/353 (90.93%), Query Frame = 0 

Query: 54  KPQIRTDPEDSAGGTAVDGGASAFQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL 113
           KPQIRTDPEDSA G AVDG ASAFQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL
Sbjct: 57  KPQIRTDPEDSAAGAAVDGAASAFQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL 116

Query: 114 DPFDCSVCLCEFQPNDKLRLLTKCSHAFHMECIDTWLLSHSTCPLCRAGLISDVGFPSKI 173
           DPFDCSVCLCEFQP+DKLRLLTKCSHAFHM CIDTWLLSHSTCPLCRAGLISDVGFPSKI
Sbjct: 117 DPFDCSVCLCEFQPDDKLRLLTKCSHAFHMVCIDTWLLSHSTCPLCRAGLISDVGFPSKI 176

Query: 174 VGVLDSVTHSSREIGEIQTGSFLG---FLGDALDFAETKPXXXXXXXXXXXXXVVPIKLG 233
           VGVLDSVTHSSREIGEIQTGSFLG                XXXXXXXXXXXX VVPIKLG
Sbjct: 177 VGVLDSVTHSSREIGEIQTGSFLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVVPIKLG 236

Query: 234 KFKSLESNGEGSSNNGKVDSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKPARKKRNLPL 293
           KFKSLESNGEGSSNNGKVDSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKPARKKRNLPL
Sbjct: 237 KFKSLESNGEGSSNNGKVDSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKPARKKRNLPL 296

Query: 294 MPGSLAAMSECDCESRREFNFTELNEKVE---------SFVEEKVGGANQAGSENGMGMT 353
           MPGSLAAMSECDCESRREFNFTELNEKVE         SFV+EKVGGAN+  SENGMGMT
Sbjct: 297 MPGSLAAMSECDCESRREFNFTELNEKVESFRRGSSKGSFVDEKVGGANRPRSENGMGMT 356

Query: 354 EEENGRRNSSEFVENRRSFVRRTLQWVMGKNTKNSRIVHSSFSTNDDHSDCSV 395
           EEENGRRNSSEFVENRRSFVRRTLQWVMGKNTKNSRIVHSSFSTNDDHSDCSV
Sbjct: 357 EEENGRRNSSEFVENRRSFVRRTLQWVMGKNTKNSRIVHSSFSTNDDHSDCSV 409

[Close]
BLAST of Carg23479 vs. NCBI nr
Match: XP_004149099.1 (PREDICTED: RING-H2 finger protein ATL13 [Cucumis sativus] >KGN61088.1 hypothetical protein Csa_2G047810 [Cucumis sativus])

HSP 1 Score: 496.5 bits (1277), Expect = 8.3e-137
Identity = 268/370 (72.43%), Postives = 287/370 (77.57%), Query Frame = 0 

Query: 54  KPQIRTDPEDSAGGTAVDGGASAFQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL 113
           KPQIRTDPEDS   TA DGGASAFQGQL+QLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL
Sbjct: 62  KPQIRTDPEDS---TAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL 121

Query: 114 DPFDCSVCLCEFQPNDKLRLLTKCSHAFHMECIDTWLLSHSTCPLCRAGLISDV-----G 173
           DPFDCSVCLCEFQPNDKLRLLTKCSHAFHM+CIDTWLL+HSTCPLCRA L+SD      G
Sbjct: 122 DPFDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGG 181

Query: 174 FPSKIVGVLDSVTHSSREIGEIQTGSFLGFLGDALDFAETKPXXXXXXXXXXXXXVVPIK 233
           F S IVGVL+S ++SSREIGE+ TGSFLGFLGD  DF E K              VVPIK
Sbjct: 182 FSSPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELK---TEEPPATGAETVVPIK 241

Query: 234 LGKFKSLESNGEGSSNNGKVDSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKPARKKRNL 293
           LGKFK+LESNGEGSSNN  V SRRCFSMGSFGYVMDENSSLQVPIRTPAVRK  RKK++L
Sbjct: 242 LGKFKNLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKQVRKKKDL 301

Query: 294 PLMPGSLAAMSECDCESRREFNFTELNEKVESF--------VEEKVGGA----------- 353
           PLM GS AA+SECDCESRREFNF EL+ +VESF         EEKV GA           
Sbjct: 302 PLMLGSRAAISECDCESRREFNFEELSGRVESFRHGNSKDSCEEKVAGAGDRVAVMDLSR 361

Query: 354 -----------NQAGSENGMGMTEEENGRRNSSEFVENRRSFVRRTLQWVMGKNTKNSRI 389
                      N+  SENGMGM +EEN RRNS EFVENR SFVRRTLQW+MGKN  N+RI
Sbjct: 362 RAFSFHFPANRNRPRSENGMGMMDEENQRRNSLEFVENRPSFVRRTLQWLMGKN--NNRI 421

[Close]
BLAST of Carg23479 vs. NCBI nr
Match: XP_008452317.1 (PREDICTED: RING-H2 finger protein ATL13 [Cucumis melo])

HSP 1 Score: 486.9 bits (1252), Expect = 6.6e-134
Identity = 263/370 (71.08%), Postives = 284/370 (76.76%), Query Frame = 0 

Query: 54  KPQIRTDPEDSAGGTAVDGGASAFQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL 113
           KPQIRTD EDS   TA DGGASAFQGQL+QLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL
Sbjct: 62  KPQIRTDLEDS---TAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL 121

Query: 114 DPFDCSVCLCEFQPNDKLRLLTKCSHAFHMECIDTWLLSHSTCPLCRAGLISDV-----G 173
           DPFDCSVCLCEFQPNDKLRLLTKCSHAFHM+CIDTWLL+HSTCPLCRA L+SD      G
Sbjct: 122 DPFDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAISGG 181

Query: 174 FPSKIVGVLDSVTHSSREIGEIQTGSFLGFLGDALDFAETKPXXXXXXXXXXXXXVVPIK 233
           F S IVGVL+S ++SSREIGE+ TGSFLGFLGD  DF E K              VVPIK
Sbjct: 182 FSSPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELK---TEEPPATGAETVVPIK 241

Query: 234 LGKFKSLESNGEGSSNNGKVDSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKPARKKRNL 293
           LGKFK+LE NGEGSSNNG V SRRCFSMGSFGYVMDENSSLQVPIRTPAVRKP RKK++L
Sbjct: 242 LGKFKNLECNGEGSSNNGNVGSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKPVRKKKDL 301

Query: 294 PLMPGSLAAMSECDCESRREFNFTELNEKVESF--------VEEKVGGA----------- 353
           PLM GS AA+SECDCESRR+FNF EL+ +VESF         EEKV G            
Sbjct: 302 PLMLGSRAAISECDCESRRDFNFEELSGRVESFRHGNSKDSCEEKVAGTGDRLPVMDLTR 361

Query: 354 -----------NQAGSENGMGMTEEENGRRNSSEFVENRRSFVRRTLQWVMGKNTKNSRI 389
                      N+  SENGMG  +EEN RR+S E VENR SFVRRTLQW+MGKN  N+RI
Sbjct: 362 RAFSFHFPANRNRPRSENGMGTMDEENQRRSSLEIVENRPSFVRRTLQWLMGKN--NNRI 421

[Close]
BLAST of Carg23479 vs. TAIR10
Match: AT4G30400.1 (RING/U-box superfamily protein)

HSP 1 Score: 234.2 bits (596), Expect = 1.4e-61
Identity = 166/392 (42.35%), Postives = 212/392 (54.08%), Query Frame = 0 

Query: 75  SAFQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLCEFQPNDKLRLL 134
           +A QGQLQQLFHLHD+GVDQSFIDTLPVF YK+IIGLK  PFDC+VCLCEF+  DKLRLL
Sbjct: 91  TALQGQLQQLFHLHDSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLL 150

Query: 135 TKCSHAFHMECIDTWLLSHSTCPLCRAGLISDVGF----PSKIVGVLDSVT-HSSREIG- 194
            KCSHAFHM+CIDTWLLSHSTCPLCR+ L+SD+       S  + VL+S + HSSREIG 
Sbjct: 151 PKCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSHQDPRSSFLLVLESASDHSSREIGG 210

Query: 195 ------------EIQTGS-FLGFLGDALDFAETK------PXXXXXXXXXXXXXVVP--I 254
                       +I   S  LG +G+  D   T+                    VVP  +
Sbjct: 211 DRDSAACVAANDDIDVSSAHLGLVGNN-DLGSTRIDSGHGDQYLDGELGGSVGKVVPFSV 270

Query: 255 KLGKFKSLESNGEGSSNNGKV------DSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKP 314
           KLGKF++++  GEG+S+N  +      D RRCFSMGS+ Y+MDE ++L+V + T   +K 
Sbjct: 271 KLGKFRNIDI-GEGTSSNNNIGNSSSLDERRCFSMGSYEYIMDEETTLKVHVST---KKQ 330

Query: 315 ARKKRNLPLMPGSLAAMSECDCESRREFNFT----------------------------- 374
           + K R L   PG   AMSEC  +      F+                             
Sbjct: 331 SSKNRGL---PGHRTAMSECGFDPTGRLKFSGSGSMRIVEEAAEKNVVERESFSVSKIWL 390

Query: 375 ----ELNEKVE-----SFVEEKVGGA------NQAGSENGM--GMTEEENGRRNSSEFVE 387
               E + KV+     S V    G A      NQ    + M     EE+N +  +SE +E
Sbjct: 391 RGKKEKHSKVQGKEDSSLVSSSSGRAFSFRLSNQRNHPDAMIESGCEEDNQKCENSESLE 450

[Close]
BLAST of Carg23479 vs. TAIR10
Match: AT2G18650.1 (RING/U-box superfamily protein)

HSP 1 Score: 213.0 bits (541), Expect = 3.3e-55
Identity = 138/342 (40.35%), Postives = 190/342 (55.56%), Query Frame = 0 

Query: 75  SAFQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLCEFQPNDKLRLL 134
           +A QGQLQQLF+LHD+GVDQS IDTLPVF YK+I+GLK+ PFDC VCLCEF+  DKLRLL
Sbjct: 83  TALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLL 142

Query: 135 TKCSHAFHMECIDTWLLSHSTCPLCRAGLISDV----GFPSKIVGVLDSVTHSSREIGEI 194
            KCSHAFH+ECIDTWLLSHSTCPLCR+ L+S         S  + VL+S   S   +  +
Sbjct: 143 PKCSHAFHVECIDTWLLSHSTCPLCRSNLLSGFSSHHNLSSSYLLVLESEQSSRDMVPVL 202

Query: 195 QTGSFLGFLGDALDFAET-------KPXXXXXXXXXXXXXVVP--IKLGKFKSLESNGEG 254
           ++ S LG+  D  + +E+       K              VVP  +KLGKF++++  GEG
Sbjct: 203 ESNSQLGY--DVNNDSESTRIRSGRKSCDPDGDMDGLDEKVVPLEVKLGKFRNIDHVGEG 262

Query: 255 --------SSNNGKVDSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKPARKKRNLPLMPG 314
                   S N+  VD RRC SMGS+ Y+MD+ ++L+V + T   +K + K R    +P 
Sbjct: 263 SDQKKNSISGNSKNVDGRRCLSMGSYEYIMDQEATLKVHVST---KKLSGKDR----VPS 322

Query: 315 SLAAMSECDCESRREFNFTELNEKVESFVEEKVGGANQAGSENGMGMTE----------- 374
               MSEC  +   +     + E+ ESF   K+    +   + G    +           
Sbjct: 323 HRTVMSECGFDPTVKGIEKSVVER-ESFSLSKIWLRGKKEKQKGTSARDSDCSFVSSSSL 382

[Close]
BLAST of Carg23479 vs. TAIR10
Match: AT5G40250.1 (RING/U-box superfamily protein)

HSP 1 Score: 165.2 bits (417), Expect = 7.9e-41
Identity = 95/217 (43.78%), Postives = 127/217 (58.53%), Query Frame = 0 

Query: 74  ASAFQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIG---------LKLDPFDCSVCLCE 133
           + A Q QLQQLFHL+D+G+DQ+FID LPVF YK I+G            +PFDC+VCLCE
Sbjct: 90  SDALQRQLQQLFHLNDSGLDQAFIDALPVFHYKEIVGSAXXXXXXXXAQEPFDCAVCLCE 149

Query: 134 FQPNDKLRLLTKCSHAFHMECIDTWLLSHSTCPLCRAGLISDVGFPSKIVGVLDSVTHSS 193
           F   DKLRLL  CSHAFH+ CIDTWL S+STCPLCR  L S  GF       +++     
Sbjct: 150 FSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLFSP-GFS------MENPMFDF 209

Query: 194 REIGEIQTGSFLGFLGDALDFAETKPXXXXXXXXXXXXXVVPIKLGKFKSLES--NGE-- 253
            +I E + G         ++  E                V+P++LGKFK L++  NG+  
Sbjct: 210 DDIREDEEGVTENGSQKTMEIQE----------IVVEKGVLPVRLGKFKRLDNVGNGQGQ 269

Query: 254 -----GSSNNGKVDSRRCFSMGSFGYVMDENSSLQVP 273
                G +++  +D+RRCFSMGS+ Y++  NS L+VP
Sbjct: 270 DVVAGGETSSSNLDARRCFSMGSYQYILG-NSELKVP 288

[Close]
BLAST of Carg23479 vs. TAIR10
Match: AT1G23980.1 (RING/U-box superfamily protein)

HSP 1 Score: 155.2 bits (391), Expect = 8.2e-38
Identity = 89/201 (44.28%), Postives = 110/201 (54.73%), Query Frame = 0 

Query: 74  ASAFQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLCEFQPNDKLRL 133
           +  +Q QLQQLFHLHD+G+DQ+ ID LPVFLYK I G K +PFDC+VCLCEF  +DKLRL
Sbjct: 101 SDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTK-EPFDCAVCLCEFSEDDKLRL 160

Query: 134 LTKCSHAFHMECIDTWLLSHSTCPLCRAGLISDVGFPSKIVGVLDSVTHSSREIGEIQTG 193
           L  CSHAFH++CIDTWLLS+STCPLCR              G L S+ H      E    
Sbjct: 161 LPNCSHAFHIDCIDTWLLSNSTCPLCR--------------GTLFSLGHQF----EYPDF 220

Query: 194 SFLGFLGDALDFAETKPXXXXXXXXXXXXXVVPIKLGKFKS--------LESNGEGSSNN 253
           +F  F GD                      V  ++LGKF+S                   
Sbjct: 221 NFGFFAGDDGGGGVRVSPVQKPAENEIGKRVFSVRLGKFRSSNIVXXXXXXXXXXXXXXX 280

Query: 254 GKVDSRRCFSMGSFGYVMDEN 267
              D+RRCFSMGS+ Y++ E+
Sbjct: 281 XXXDNRRCFSMGSYQYIVAES 282

[Close]
BLAST of Carg23479 vs. TAIR10
Match: AT5G57750.1 (RING/U-box superfamily protein)

HSP 1 Score: 131.0 bits (328), Expect = 1.7e-30
Identity = 64/111 (57.66%), Postives = 81/111 (72.97%), Query Frame = 0 

Query: 54  KPQIRTDPEDSAGGTAVDGGASAFQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL 113
           +PQ R D  D+  G  +   ++A QG+ Q  F+LHDA +DQSFID LP+  YK +IGL+ 
Sbjct: 62  RPQTRLD--DAYDG--ITESSTALQGRYQTRFNLHDAEIDQSFIDALPLLHYKTMIGLRH 121

Query: 114 DPFDCSVCLCEFQPNDKLRLLTKCSHAFHMECIDTWLLSHSTCPLCRAGLI 165
           D  DC+VCL EF   D+LRLL KCSHAFH+ECIDTWLL++STCPLCR  L+
Sbjct: 122 DLSDCAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNSTCPLCRDNLL 168

[Close]
BLAST of Carg23479 vs. Swiss-Prot
Match: sp|Q940Q4|ATL13_ARATH (RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2)

HSP 1 Score: 234.2 bits (596), Expect = 2.5e-60
Identity = 166/392 (42.35%), Postives = 212/392 (54.08%), Query Frame = 0 

Query: 75  SAFQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLCEFQPNDKLRLL 134
           +A QGQLQQLFHLHD+GVDQSFIDTLPVF YK+IIGLK  PFDC+VCLCEF+  DKLRLL
Sbjct: 91  TALQGQLQQLFHLHDSGVDQSFIDTLPVFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLL 150

Query: 135 TKCSHAFHMECIDTWLLSHSTCPLCRAGLISDVGF----PSKIVGVLDSVT-HSSREIG- 194
            KCSHAFHM+CIDTWLLSHSTCPLCR+ L+SD+       S  + VL+S + HSSREIG 
Sbjct: 151 PKCSHAFHMDCIDTWLLSHSTCPLCRSSLLSDLSSHQDPRSSFLLVLESASDHSSREIGG 210

Query: 195 ------------EIQTGS-FLGFLGDALDFAETK------PXXXXXXXXXXXXXVVP--I 254
                       +I   S  LG +G+  D   T+                    VVP  +
Sbjct: 211 DRDSAACVAANDDIDVSSAHLGLVGNN-DLGSTRIDSGHGDQYLDGELGGSVGKVVPFSV 270

Query: 255 KLGKFKSLESNGEGSSNNGKV------DSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKP 314
           KLGKF++++  GEG+S+N  +      D RRCFSMGS+ Y+MDE ++L+V + T   +K 
Sbjct: 271 KLGKFRNIDI-GEGTSSNNNIGNSSSLDERRCFSMGSYEYIMDEETTLKVHVST---KKQ 330

Query: 315 ARKKRNLPLMPGSLAAMSECDCESRREFNFT----------------------------- 374
           + K R L   PG   AMSEC  +      F+                             
Sbjct: 331 SSKNRGL---PGHRTAMSECGFDPTGRLKFSGSGSMRIVEEAAEKNVVERESFSVSKIWL 390

Query: 375 ----ELNEKVE-----SFVEEKVGGA------NQAGSENGM--GMTEEENGRRNSSEFVE 387
               E + KV+     S V    G A      NQ    + M     EE+N +  +SE +E
Sbjct: 391 RGKKEKHSKVQGKEDSSLVSSSSGRAFSFRLSNQRNHPDAMIESGCEEDNQKCENSESLE 450

[Close]
BLAST of Carg23479 vs. Swiss-Prot
Match: sp|Q9ZV53|ATL49_ARATH (Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 PE=3 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 6.0e-54
Identity = 138/342 (40.35%), Postives = 190/342 (55.56%), Query Frame = 0 

Query: 75  SAFQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLCEFQPNDKLRLL 134
           +A QGQLQQLF+LHD+GVDQS IDTLPVF YK+I+GLK+ PFDC VCLCEF+  DKLRLL
Sbjct: 83  TALQGQLQQLFNLHDSGVDQSLIDTLPVFHYKSIVGLKISPFDCPVCLCEFETEDKLRLL 142

Query: 135 TKCSHAFHMECIDTWLLSHSTCPLCRAGLISDV----GFPSKIVGVLDSVTHSSREIGEI 194
            KCSHAFH+ECIDTWLLSHSTCPLCR+ L+S         S  + VL+S   S   +  +
Sbjct: 143 PKCSHAFHVECIDTWLLSHSTCPLCRSNLLSGFSSHHNLSSSYLLVLESEQSSRDMVPVL 202

Query: 195 QTGSFLGFLGDALDFAET-------KPXXXXXXXXXXXXXVVP--IKLGKFKSLESNGEG 254
           ++ S LG+  D  + +E+       K              VVP  +KLGKF++++  GEG
Sbjct: 203 ESNSQLGY--DVNNDSESTRIRSGRKSCDPDGDMDGLDEKVVPLEVKLGKFRNIDHVGEG 262

Query: 255 --------SSNNGKVDSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKPARKKRNLPLMPG 314
                   S N+  VD RRC SMGS+ Y+MD+ ++L+V + T   +K + K R    +P 
Sbjct: 263 SDQKKNSISGNSKNVDGRRCLSMGSYEYIMDQEATLKVHVST---KKLSGKDR----VPS 322

Query: 315 SLAAMSECDCESRREFNFTELNEKVESFVEEKVGGANQAGSENGMGMTE----------- 374
               MSEC  +   +     + E+ ESF   K+    +   + G    +           
Sbjct: 323 HRTVMSECGFDPTVKGIEKSVVER-ESFSLSKIWLRGKKEKQKGTSARDSDCSFVSSSSL 382

[Close]
BLAST of Carg23479 vs. Swiss-Prot
Match: sp|Q9FL07|ATL46_ARATH (RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.4e-39
Identity = 95/217 (43.78%), Postives = 127/217 (58.53%), Query Frame = 0 

Query: 74  ASAFQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIG---------LKLDPFDCSVCLCE 133
           + A Q QLQQLFHL+D+G+DQ+FID LPVF YK I+G            +PFDC+VCLCE
Sbjct: 90  SDALQRQLQQLFHLNDSGLDQAFIDALPVFHYKEIVGSAXXXXXXXXAQEPFDCAVCLCE 149

Query: 134 FQPNDKLRLLTKCSHAFHMECIDTWLLSHSTCPLCRAGLISDVGFPSKIVGVLDSVTHSS 193
           F   DKLRLL  CSHAFH+ CIDTWL S+STCPLCR  L S  GF       +++     
Sbjct: 150 FSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLFSP-GFS------MENPMFDF 209

Query: 194 REIGEIQTGSFLGFLGDALDFAETKPXXXXXXXXXXXXXVVPIKLGKFKSLES--NGE-- 253
            +I E + G         ++  E                V+P++LGKFK L++  NG+  
Sbjct: 210 DDIREDEEGVTENGSQKTMEIQE----------IVVEKGVLPVRLGKFKRLDNVGNGQGQ 269

Query: 254 -----GSSNNGKVDSRRCFSMGSFGYVMDENSSLQVP 273
                G +++  +D+RRCFSMGS+ Y++  NS L+VP
Sbjct: 270 DVVAGGETSSSNLDARRCFSMGSYQYILG-NSELKVP 288

[Close]
BLAST of Carg23479 vs. Swiss-Prot
Match: sp|Q8GW38|ATL47_ARATH (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.5e-36
Identity = 89/201 (44.28%), Postives = 110/201 (54.73%), Query Frame = 0 

Query: 74  ASAFQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKLDPFDCSVCLCEFQPNDKLRL 133
           +  +Q QLQQLFHLHD+G+DQ+ ID LPVFLYK I G K +PFDC+VCLCEF  +DKLRL
Sbjct: 101 SDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTK-EPFDCAVCLCEFSEDDKLRL 160

Query: 134 LTKCSHAFHMECIDTWLLSHSTCPLCRAGLISDVGFPSKIVGVLDSVTHSSREIGEIQTG 193
           L  CSHAFH++CIDTWLLS+STCPLCR              G L S+ H      E    
Sbjct: 161 LPNCSHAFHIDCIDTWLLSNSTCPLCR--------------GTLFSLGHQF----EYPDF 220

Query: 194 SFLGFLGDALDFAETKPXXXXXXXXXXXXXVVPIKLGKFKS--------LESNGEGSSNN 253
           +F  F GD                      V  ++LGKF+S                   
Sbjct: 221 NFGFFAGDDGGGGVRVSPVQKPAENEIGKRVFSVRLGKFRSSNIVXXXXXXXXXXXXXXX 280

Query: 254 GKVDSRRCFSMGSFGYVMDEN 267
              D+RRCFSMGS+ Y++ E+
Sbjct: 281 XXXDNRRCFSMGSYQYIVAES 282

[Close]
BLAST of Carg23479 vs. Swiss-Prot
Match: sp|Q9FHG8|ATL50_ARATH (Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana OX=3702 GN=ATL50 PE=3 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 3.0e-29
Identity = 64/111 (57.66%), Postives = 81/111 (72.97%), Query Frame = 0 

Query: 54  KPQIRTDPEDSAGGTAVDGGASAFQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL 113
           +PQ R D  D+  G  +   ++A QG+ Q  F+LHDA +DQSFID LP+  YK +IGL+ 
Sbjct: 62  RPQTRLD--DAYDG--ITESSTALQGRYQTRFNLHDAEIDQSFIDALPLLHYKTMIGLRH 121

Query: 114 DPFDCSVCLCEFQPNDKLRLLTKCSHAFHMECIDTWLLSHSTCPLCRAGLI 165
           D  DC+VCL EF   D+LRLL KCSHAFH+ECIDTWLL++STCPLCR  L+
Sbjct: 122 DLSDCAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNSTCPLCRDNLL 168

[Close]
BLAST of Carg23479 vs. TrEMBL
Match: tr|A0A0A0LH59|A0A0A0LH59_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G047810 PE=4 SV=1)

HSP 1 Score: 496.5 bits (1277), Expect = 5.5e-137
Identity = 268/370 (72.43%), Postives = 287/370 (77.57%), Query Frame = 0 

Query: 54  KPQIRTDPEDSAGGTAVDGGASAFQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL 113
           KPQIRTDPEDS   TA DGGASAFQGQL+QLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL
Sbjct: 62  KPQIRTDPEDS---TAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL 121

Query: 114 DPFDCSVCLCEFQPNDKLRLLTKCSHAFHMECIDTWLLSHSTCPLCRAGLISDV-----G 173
           DPFDCSVCLCEFQPNDKLRLLTKCSHAFHM+CIDTWLL+HSTCPLCRA L+SD      G
Sbjct: 122 DPFDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAINGG 181

Query: 174 FPSKIVGVLDSVTHSSREIGEIQTGSFLGFLGDALDFAETKPXXXXXXXXXXXXXVVPIK 233
           F S IVGVL+S ++SSREIGE+ TGSFLGFLGD  DF E K              VVPIK
Sbjct: 182 FSSPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELK---TEEPPATGAETVVPIK 241

Query: 234 LGKFKSLESNGEGSSNNGKVDSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKPARKKRNL 293
           LGKFK+LESNGEGSSNN  V SRRCFSMGSFGYVMDENSSLQVPIRTPAVRK  RKK++L
Sbjct: 242 LGKFKNLESNGEGSSNNSNVGSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKQVRKKKDL 301

Query: 294 PLMPGSLAAMSECDCESRREFNFTELNEKVESF--------VEEKVGGA----------- 353
           PLM GS AA+SECDCESRREFNF EL+ +VESF         EEKV GA           
Sbjct: 302 PLMLGSRAAISECDCESRREFNFEELSGRVESFRHGNSKDSCEEKVAGAGDRVAVMDLSR 361

Query: 354 -----------NQAGSENGMGMTEEENGRRNSSEFVENRRSFVRRTLQWVMGKNTKNSRI 389
                      N+  SENGMGM +EEN RRNS EFVENR SFVRRTLQW+MGKN  N+RI
Sbjct: 362 RAFSFHFPANRNRPRSENGMGMMDEENQRRNSLEFVENRPSFVRRTLQWLMGKN--NNRI 421

[Close]
BLAST of Carg23479 vs. TrEMBL
Match: tr|A0A1S3BUP8|A0A1S3BUP8_CUCME (RING-H2 finger protein ATL13 OS=Cucumis melo OX=3656 GN=LOC103493377 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 4.3e-134
Identity = 263/370 (71.08%), Postives = 284/370 (76.76%), Query Frame = 0 

Query: 54  KPQIRTDPEDSAGGTAVDGGASAFQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL 113
           KPQIRTD EDS   TA DGGASAFQGQL+QLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL
Sbjct: 62  KPQIRTDLEDS---TAGDGGASAFQGQLRQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL 121

Query: 114 DPFDCSVCLCEFQPNDKLRLLTKCSHAFHMECIDTWLLSHSTCPLCRAGLISDV-----G 173
           DPFDCSVCLCEFQPNDKLRLLTKCSHAFHM+CIDTWLL+HSTCPLCRA L+SD      G
Sbjct: 122 DPFDCSVCLCEFQPNDKLRLLTKCSHAFHMDCIDTWLLTHSTCPLCRASLVSDFAAISGG 181

Query: 174 FPSKIVGVLDSVTHSSREIGEIQTGSFLGFLGDALDFAETKPXXXXXXXXXXXXXVVPIK 233
           F S IVGVL+S ++SSREIGE+ TGSFLGFLGD  DF E K              VVPIK
Sbjct: 182 FSSPIVGVLESASNSSREIGEVHTGSFLGFLGDVSDFTELK---TEEPPATGAETVVPIK 241

Query: 234 LGKFKSLESNGEGSSNNGKVDSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKPARKKRNL 293
           LGKFK+LE NGEGSSNNG V SRRCFSMGSFGYVMDENSSLQVPIRTPAVRKP RKK++L
Sbjct: 242 LGKFKNLECNGEGSSNNGNVGSRRCFSMGSFGYVMDENSSLQVPIRTPAVRKPVRKKKDL 301

Query: 294 PLMPGSLAAMSECDCESRREFNFTELNEKVESF--------VEEKVGGA----------- 353
           PLM GS AA+SECDCESRR+FNF EL+ +VESF         EEKV G            
Sbjct: 302 PLMLGSRAAISECDCESRRDFNFEELSGRVESFRHGNSKDSCEEKVAGTGDRLPVMDLTR 361

Query: 354 -----------NQAGSENGMGMTEEENGRRNSSEFVENRRSFVRRTLQWVMGKNTKNSRI 389
                      N+  SENGMG  +EEN RR+S E VENR SFVRRTLQW+MGKN  N+RI
Sbjct: 362 RAFSFHFPANRNRPRSENGMGTMDEENQRRSSLEIVENRPSFVRRTLQWLMGKN--NNRI 421

[Close]
BLAST of Carg23479 vs. TrEMBL
Match: tr|A0A0L9TCZ4|A0A0L9TCZ4_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan541s002000 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 6.4e-77
Identity = 178/355 (50.14%), Postives = 213/355 (60.00%), Query Frame = 0 

Query: 54  KPQIRTDPEDSAGGTAVDGGASAFQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL 113
           +PQ R +P+D          A+A QGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLK 
Sbjct: 73  RPQTR-EPDDL-------DNATALQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLK- 132

Query: 114 DPFDCSVCLCEFQPNDKLRLLTKCSHAFHMECIDTWLLSHSTCPLCRAGLISDVGFP--- 173
           +PFDC+VCLCEF+P DKLRLL KCSHAFHMECIDTWLLSHSTCPLCRA L+ +       
Sbjct: 133 NPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPEFSVGNSC 192

Query: 174 SKIVGVLDSVTHSSREI------------GEIQTGSFLGFLGDA--------LDFAETKP 233
           S  V VL+S + SSREI              + + S LG  GD+        L   E   
Sbjct: 193 SPYVLVLESGSESSREIVPEREAVVGRSSSVMTSNSRLGCHGDSEFGSTRVDLKSGELLS 252

Query: 234 XXXXXXXXXXXXXVVPIKLGKFKSLE---SNGEGSSNNGKVDSRRCFSMGSFGYVMDENS 293
                        VV +KLGKFKS++     GEGSS    VDSRRCFSMGSF YVMDE+S
Sbjct: 253 EAPDPTVPNGVEKVVTVKLGKFKSVDGGGDGGEGSSTTNNVDSRRCFSMGSFAYVMDESS 312

Query: 294 SLQVPIRTPAVRKPARKKRNLPLMPGSLAAMSECDCESRREFNFTELNEKVESFVEEKVG 353
           SLQVPIRTP  ++ ++KK  LPL PG   AMSECDCESRR+F F   +  +    +   G
Sbjct: 313 SLQVPIRTPIKKQSSKKKSGLPLTPGHRPAMSECDCESRRDFKFAVFDATIVEDDDASGG 372

Query: 354 GANQAGSENGMGMTEEENGRRNSSEFVENRRSFVRRTLQWVMGKNTKNSRIVHSS 383
            A +  + NG           NS+    NR+  +  +  W+ GK  K + +  SS
Sbjct: 373 AATERTTCNG-----------NSAAIGRNRKESLSISKIWLRGKKDKPNAVADSS 407

[Close]
BLAST of Carg23479 vs. TrEMBL
Match: tr|A0A0S3R829|A0A0S3R829_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G470900 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 6.4e-77
Identity = 178/355 (50.14%), Postives = 213/355 (60.00%), Query Frame = 0 

Query: 54  KPQIRTDPEDSAGGTAVDGGASAFQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL 113
           +PQ R +P+D          A+A QGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLK 
Sbjct: 73  RPQTR-EPDDL-------DNATALQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLK- 132

Query: 114 DPFDCSVCLCEFQPNDKLRLLTKCSHAFHMECIDTWLLSHSTCPLCRAGLISDVGFP--- 173
           +PFDC+VCLCEF+P DKLRLL KCSHAFHMECIDTWLLSHSTCPLCRA L+ +       
Sbjct: 133 NPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPEFSVGNSC 192

Query: 174 SKIVGVLDSVTHSSREI------------GEIQTGSFLGFLGDA--------LDFAETKP 233
           S  V VL+S + SSREI              + + S LG  GD+        L   E   
Sbjct: 193 SPYVLVLESGSESSREIVPEREAVVGRSSSVMTSNSRLGCHGDSEFGSTRVDLKSGELLS 252

Query: 234 XXXXXXXXXXXXXVVPIKLGKFKSLE---SNGEGSSNNGKVDSRRCFSMGSFGYVMDENS 293
                        VV +KLGKFKS++     GEGSS    VDSRRCFSMGSF YVMDE+S
Sbjct: 253 EAPDPTVPNGVEKVVTVKLGKFKSVDGGGDGGEGSSTTNNVDSRRCFSMGSFAYVMDESS 312

Query: 294 SLQVPIRTPAVRKPARKKRNLPLMPGSLAAMSECDCESRREFNFTELNEKVESFVEEKVG 353
           SLQVPIRTP  ++ ++KK  LPL PG   AMSECDCESRR+F F   +  +    +   G
Sbjct: 313 SLQVPIRTPIKKQSSKKKSGLPLTPGHRPAMSECDCESRRDFKFAVFDATIVEDDDASGG 372

Query: 354 GANQAGSENGMGMTEEENGRRNSSEFVENRRSFVRRTLQWVMGKNTKNSRIVHSS 383
            A +  + NG           NS+    NR+  +  +  W+ GK  K + +  SS
Sbjct: 373 AATERTTCNG-----------NSAAIGRNRKESLSISKIWLRGKKDKPNAVADSS 407

[Close]
BLAST of Carg23479 vs. TrEMBL
Match: tr|A0A1S3UHQ9|A0A1S3UHQ9_VIGRR (RING-H2 finger protein ATL13 OS=Vigna radiata var. radiata OX=3916 GN=LOC106765453 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 2.4e-76
Identity = 178/355 (50.14%), Postives = 212/355 (59.72%), Query Frame = 0 

Query: 54  KPQIRTDPEDSAGGTAVDGGASAFQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLKL 113
           +PQ R +P+D          A+A QGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLK 
Sbjct: 73  RPQTR-EPDDL-------DNATALQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGLK- 132

Query: 114 DPFDCSVCLCEFQPNDKLRLLTKCSHAFHMECIDTWLLSHSTCPLCRAGLISDVGFP--- 173
           +PFDC+VCLCEF+P DKLRLL KCSHAFHMECIDTWLLSHSTCPLCRA L+ +       
Sbjct: 133 NPFDCAVCLCEFEPEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRASLLPEFSVGNSC 192

Query: 174 SKIVGVLDSVTHSSREI------------GEIQTGSFLGFLGDA--------LDFAETKP 233
           S  V VL+S + SSREI              + + S LG  GD+        L   E   
Sbjct: 193 SPYVLVLESGSESSREIVPEREAAVGRSSSVMTSNSRLGCHGDSEFGSTRVDLKSGELLS 252

Query: 234 XXXXXXXXXXXXXVVPIKLGKFKSLE---SNGEGSSNNGKVDSRRCFSMGSFGYVMDENS 293
                        VV +KLGKFKS++     GEGSS    VDSRRCFSMGSF YVMDE+S
Sbjct: 253 EAPDPTLPNGVEKVVTVKLGKFKSVDGGGDGGEGSSTTNNVDSRRCFSMGSFAYVMDESS 312

Query: 294 SLQVPIRTPAVRKPARKKRNLPLMPGSLAAMSECDCESRREFNFTELNEKVESFVEEKVG 353
           SLQVPIRTP  ++ ++KK  LPL PG   AMSECDCESRR+F F   +  +   VE+   
Sbjct: 313 SLQVPIRTPIKKQSSKKKSGLPLTPGHRPAMSECDCESRRDFKFAVFDATI---VEDDAA 372

Query: 354 GANQAGSENGMGMTEEENGRRNSSEFVENRRSFVRRTLQWVMGKNTKNSRIVHSS 383
            +  A        T+      NS+    NR+     +  W+ GK  K + +  SS
Sbjct: 373 SSGAA--------TDRTTCNENSAAIGRNRKESFSISKIWLRGKKDKPNAVADSS 407

The following BLAST results are available for this feature:
BLAST of Carg23479 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022938053.13.6e-18097.65RING-H2 finger protein ATL13-like [Cucurbita moschata][more]
XP_022965405.14.5e-16791.14RING-H2 finger protein ATL13-like [Cucurbita maxima][more]
XP_023538250.18.5e-16690.08RING-H2 finger protein ATL13-like [Cucurbita pepo subsp. pepo][more]
XP_004149099.18.3e-13772.43PREDICTED: RING-H2 finger protein ATL13 [Cucumis sativus] >KGN61088.1 hypothetic... [more]
XP_008452317.16.6e-13471.08PREDICTED: RING-H2 finger protein ATL13 [Cucumis melo][more]
BLAST of Carg23479 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G30400.11.4e-6142.35RING/U-box superfamily protein[more]
AT2G18650.13.3e-5540.35RING/U-box superfamily protein[more]
AT5G40250.17.9e-4143.78RING/U-box superfamily protein[more]
AT1G23980.18.2e-3844.28RING/U-box superfamily protein[more]
AT5G57750.11.7e-3057.66RING/U-box superfamily protein[more]
BLAST of Carg23479 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q940Q4|ATL13_ARATH2.5e-6042.35RING-H2 finger protein ATL13 OS=Arabidopsis thaliana OX=3702 GN=ATL13 PE=2 SV=2[more]
sp|Q9ZV53|ATL49_ARATH6.0e-5440.35Putative RING-H2 finger protein ATL49 OS=Arabidopsis thaliana OX=3702 GN=ATL49 P... [more]
sp|Q9FL07|ATL46_ARATH1.4e-3943.78RING-H2 finger protein ATL46 OS=Arabidopsis thaliana OX=3702 GN=ATL46 PE=2 SV=1[more]
sp|Q8GW38|ATL47_ARATH1.5e-3644.28RING-H2 finger protein ATL47 OS=Arabidopsis thaliana OX=3702 GN=ATL47 PE=2 SV=1[more]
sp|Q9FHG8|ATL50_ARATH3.0e-2957.66Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana OX=3702 GN=ATL50 P... [more]
BLAST of Carg23479 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LH59|A0A0A0LH59_CUCSA5.5e-13772.43Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G047810 PE=4 SV=1[more]
tr|A0A1S3BUP8|A0A1S3BUP8_CUCME4.3e-13471.08RING-H2 finger protein ATL13 OS=Cucumis melo OX=3656 GN=LOC103493377 PE=4 SV=1[more]
tr|A0A0L9TCZ4|A0A0L9TCZ4_PHAAN6.4e-7750.14Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan541s002000 P... [more]
tr|A0A0S3R829|A0A0S3R829_PHAAN6.4e-7750.14Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G... [more]
tr|A0A1S3UHQ9|A0A1S3UHQ9_VIGRR2.4e-7650.14RING-H2 finger protein ATL13 OS=Vigna radiata var. radiata OX=3916 GN=LOC1067654... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg23479-RACarg23479-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 118..159
e-value: 4.5E-5
score: 32.9
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 117..160
e-value: 9.2E-13
score: 48.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 118..160
score: 12.607
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 80..164
e-value: 7.2E-20
score: 72.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 329..353
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 9..318
NoneNo IPR availablePANTHERPTHR14155:SF407SUBFAMILY NOT NAMEDcoord: 9..318
NoneNo IPR availableCDDcd16461RING-H2_EL5_likecoord: 117..160
e-value: 2.26571E-18
score: 77.3503
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 100..168