Carg23470 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23470
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Violaxanthin de-epoxidase
Location	Cucurbita_argyrosperma_scaffold_196 : 264741 .. 268888 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTGTTTATCACTTAACAAATGGTTGTAATGCTTGCAGGAGAAAGGTGCTATGTTATCATGGAATACTAGTGGACAAAATATATTCAAAATACTTCTTACCTTGCAAATCTACTTCCACTGGTAGAGTGTGTAAGTCAAGAAGTTTAACAGTTCTGTCCCATAGGTCAGAGAAGAATGCCTTATGTCAAACGAAGATAAGTAAACCTAAGGTACCTTCCTATGTATACCTTAGTTTCATTAAACGTGCTCGTTTTTTTTTCTCTTTTCTCTCATCACTTTTGCGTTGCCTGGTTTATCTGTCTATTCGGAAGGTCGATGAATGCTTCGACTTTATTTTTGGAACATTATCGAGTGTTCTTCGAGAATGGAGCCAATTACGGTCGATGGGTGTAGTTATTATATTGGCATGTACTCTCATGTTCGTTCCATCGTCTCGAGCCGTTGATGCACTCAAAACATGTACATGCTTACTAAAGGAATGCAGGTATTTCTAGTTTATCCTTGCTGATTGGTAACTCATGTCATAGCGTCTCTCCTTCGTGTTTCTATTGTGAGTTAAGGATTTTACCAAAATAGTGCCCGTGAATCGAGGAAATAATAATAATAATTTACCCCTCGGGTCGTGGTTAGAGTAATTGTTGGTCTTTCTGTATCTTGGTTATGTGGATCTGGGACCTGAAGAGTATTGTGAGGTCCCATATTGATTGGAGAGAGAAATGAGTGTCAGTGAGGACGCTGGGCCCTAAAGGGGGTGGATTGTGAGATCCCACATTGGTTTGAGAGGGAAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCTCTAGCAGACACTTTTTTTATAAAACCTTGCTAGTGGTAGGCTTGAGCTGTTACAAATGGTATTGAAGCTAGACACTGGATGGTGTGCTAGCAAGTACACTGGACACTAGGCAGTGTGCCATCGAGGACGTTGGGCCCCGAAGGGAGGTGTATTGTGAGATCCCACATTGATTGGAGAGAGAAACGAGTACCAACAAGGACGCTGGGCCTCGAAGGGGGTGGACAAGGACGCTGGGCCTCGAAGGGGGTGGACAAGGACACTGGGCCTCGAAAGGGGGTGGATTGTGAGATCCCACATTGGTCACATCGGTTAGAGAGGGGAACGAAGCACTCTTTATAAGGGTGTGAAAAATTCTCCATAGCAGACAAACCTTCAGTGGAAGTAGACAACGAAGCACTCTTTATAAGAGTGGAAGTATCTGCTCACGGTAGGCTTGGCCTATTACAAGTTTCTATTGTTATATAATGTGCCCTTTTTTATGTTCATTTTCTCCTCTCTCGGTTAGCGTTTGCCCCACTTTCGCGACCATGGCTTACCCTCTTCTTCTTCCCATTCGGGTTTCTGTCATCTCACTTTCGAAAGAGAGCCTATGCTTAGTATCCTTGATCCGGAAGTCACCTTTTCCCTAAACGGGAGGTACGTTTGGCCAAAGCAGCTCTCTCTTCAGTCTGTTTCCCATCGTAAGTAGGAGTCCGTTTCCCATTCATCAAGTAGTGTTCGGAGAAAGGTTTTTAATCTTCTATTATAAAGTCATTAGATTTTGCAAAAATTTCATAGAAACAATATTATCCATGAGCGTTGACGCCTACGAACGAGAGAACCACCTGATTTTACTATATTTGGTTGACAAAGATACTCGTAGGATATTAAATCTTAGACGGACGGCTACTATAGTTTGAACCTTTTTTCACTACTCCAACGACCACTAAACCGACCCATGGTTGTTCCAACACTTCTTTACTAATATCACATGGCTTCTAAAACGGCTAGTTTCTTCTCCCTTATGTCAGGCTTGAACTTGCCAAATGCATATCAAACCCATTATGTGCTGCCAATGTTGCTTGTCTCCAAACCTGCAACGATCGACCCGACGAGACTGAATGCCAGGTTAGTTTTCTCATGGCTCTACGTAACGCGTCACACGATTTCAGAAATTAACTAATTTTTTTCTCTTTGTAGATTAAATGTGGTGACCTATTCGAAAACAGCGTCGTGGATGAATTTAATGAATGTGCAGTGTCACGAAAAAAATGTGTACCTACGAAATCCGATGTCGGGGACTTTCCTGTACCCGACCCGTCTGTTCTTGTCAAGAGTTTCAATATATCAGATTTCAGTGGGAAGTGGTTTATCACTAGTGGCTTAAATCCTACTTTTGATACGTTTGATTGTCAGTTGCATGAATTTCATGTAGAGTCTGGCAAACTTGTTGGAAATATAACGTGGAGAATACGAACTCCAGATAGCGGTTTTTTCACTCGGTCGACGACGCAGAGATTCGTGCAAGATCCCGAGCATCCTGGGATACTCTATAACCACAACAATGAGTATCTTCACTATGAGGATGACTGGTATGCTTTCATTTCATTTCTAAATGTTCAAATTTCCTAGTACGCGATCTATTCCATTGGCATTCACTATCATGCGTTGGCTTGGCTGGGCTTCCCCTCAAGATTTCTTGAAACGTGTCTGCTAGGTAGAGACTTTCCTTCAAGATTTTTAAAACGTGTCTACTAGAAAGAGAGTCTAGCCCTACTCTGATCAGTACCTCGCACCGTTCGGTGACTGGCTTTGATACTATTTGTAACAGCTCAAGCCCACCGCTAGCAAATATTGTCCTCTTTGGACTTTCCCTTTTGGACTTTCCTTCAAGGTTTTAAAACACGTCTACTAGGGGAAGTTTCCACACCCTTATGAGGAATCTTTCGTTCCCCTCTCCAACCAATGTGGGATCTCACAATCCACCCACTTGGGGAGCCAACGTTCTCGCTGGCACACTGCCCGATGTCTGGCTCTGATATCATTTGTAATAACTCAAGCCCACCGCTAGCAAATATTGTCCTCTTTGGGCTTTCCCTTTTAGGCTTCCCCTCAAGGTTTTTAAAATGCATCTACTAGGGAGAGAGTCTAGCTCTACTCCGATCAATGCCTCGCACCGTTCGGTGACTGACTCTGATATCATTTGTAACATCCCAAGCCCACCGCTAGCAAATATTGTCCTCTTTGGGCTTTCCCTTTCGAGCTTGCTCTTAAGGTTTTAAAACACGTTTACTGTTAGTGGTTTTCACACCCTTATAAGGAATGTTTCGTTCCCTCTCCAACCAATGTGGGATCTCACAATCCACCCCCTTGGGGGGTCAACGTCCTTGCAGGCACACCACTCGATGTCTGGTTCTGATACCATTTGTAACAGCTCAAGCCTATTGCTAGCAAATATTATCCTCTTTGGGCTTTTCCTTTCAGGCTTCCCCTCAAGGTTTTAAAACGCGTCTATTGGGGAGAGAGTCTAGCCCTACTCCGTTTAGTACCTCGCACCGTTCAGTAACTGGCTCTGATACCATTTGTATCAACCCAACCCCACCATTAGCAGATATTGTTCTCTTTGGGCTTTTCCTCTGGACTTCCTCTCAAGATTTTAAAACGCATCTACTAAAAAGAGGTTTTCACGCCCTTAGAGGACCAAAATCCTTTCATGTTATTTGATCACATATTAGAAGCATTGAACTGGTGATCATCTGTAGTATCCTCAACTAGGAATTGTAATTGTTTATCTCCTCCCTTCTCAGGTATATATTATCAAGCCAGGTGGAGAACAAACCCGACGATTACATTTTCGTATACTATCGTGGTCGGAACGACGCATGGGATGGCTACGGCGGAGCCGTTGTATACACAAGAAGCGCAGTACTGCCAGAAAGCATAGTTCCCGAGCTAGAAAGAGCAGCTAAGAGCGTAGGGAGAGACTTCAACAAGTTCATAAAAACAGACAATTCGTGTGGCCCGGAGCCGCCGCTCGTAGAAAGGCTAGAGAAGACATTGGAAAGCGGAGAACAAACAATCGTTAGGGAAGTCGAACAGATCGAACAAGAGGTGGAGAAGGAGGTCGAACAGCTCGAAAAAGAGGTGGAAACAGTAGGGAAGGCAGAGATGTCATTGGTTGAGAAGTTGGGAGAAGGTCTTAAAGAACTTCAAAGGGATGAGGAATTCTTCCTTAGAGAGTTATCTAAAGAAGAGAGTGATCTTTTGAATGAGCTTAAAATGGAAGCAAATGAGGTTGAGAGTTTGTTTGGAAGAGCACTTGCTCTTAGAAAATTAAGATAA

mRNA sequence

ATGATTGTTTATCACTTAACAAATGGTTGTAATGCTTGCAGGAGAAAGGTGCTATGTTATCATGGAATACTAGTGGACAAAATATATTCAAAATACTTCTTACCTTGCAAATCTACTTCCACTGGTAGAGTGTGTAAGTCAAGAAGTTTAACAGTTCTGTCCCATAGGTCAGAGAAGAATGCCTTATGTCAAACGAAGATAAGTAAACCTAAGGTCGATGAATGCTTCGACTTTATTTTTGGAACATTATCGAGTGTTCTTCGAGAATGGAGCCAATTACGGTCGATGGGTGTAGTTATTATATTGGCATGTACTCTCATGTTCGTTCCATCGTCTCGAGCCGTTGATGCACTCAAAACATGTACATGCTTACTAAAGGAATGCAGGCTTGAACTTGCCAAATGCATATCAAACCCATTATGTGCTGCCAATGTTGCTTGTCTCCAAACCTGCAACGATCGACCCGACGAGACTGAATGCCAGATTAAATGTGGTGACCTATTCGAAAACAGCGTCGTGGATGAATTTAATGAATGTGCAGTGTCACGAAAAAAATGTGTACCTACGAAATCCGATGTCGGGGACTTTCCTGTACCCGACCCGTCTGTTCTTGTCAAGAGTTTCAATATATCAGATTTCAGTGGGAAGTGGTTTATCACTAGTGGCTTAAATCCTACTTTTGATACGTTTGATTGTCAGTTGCATGAATTTCATGTAGAGTCTGGCAAACTTGTTGGAAATATAACGTGGAGAATACGAACTCCAGATAGCGGTTTTTTCACTCGGTCGACGACGCAGAGATTCGTGCAAGATCCCGAGCATCCTGGGATACTCTATAACCACAACAATGAGTATCTTCACTATGAGGATGACTGGTATATATTATCAAGCCAGGTGGAGAACAAACCCGACGATTACATTTTCGTATACTATCGTGGTCGGAACGACGCATGGGATGGCTACGGCGGAGCCGTTGTATACACAAGAAGCGCAGTACTGCCAGAAAGCATAGTTCCCGAGCTAGAAAGAGCAGCTAAGAGCGTAGGGAGAGACTTCAACAAGTTCATAAAAACAGACAATTCGTGTGGCCCGGAGCCGCCGCTCGTAGAAAGGCTAGAGAAGACATTGGAAAGCGGAGAACAAACAATCGTTAGGGAAGTCGAACAGATCGAACAAGAGGTGGAGAAGGAGGTCGAACAGCTCGAAAAAGAGGTGGAAACAGTAGGGAAGGCAGAGATGTCATTGGTTGAGAAGTTGGGAGAAGGTCTTAAAGAACTTCAAAGGGATGAGGAATTCTTCCTTAGAGAGTTATCTAAAGAAGAGAGTGATCTTTTGAATGAGCTTAAAATGGAAGCAAATGAGGTTGAGAGTTTGTTTGGAAGAGCACTTGCTCTTAGAAAATTAAGATAA

Coding sequence (CDS)

ATGATTGTTTATCACTTAACAAATGGTTGTAATGCTTGCAGGAGAAAGGTGCTATGTTATCATGGAATACTAGTGGACAAAATATATTCAAAATACTTCTTACCTTGCAAATCTACTTCCACTGGTAGAGTGTGTAAGTCAAGAAGTTTAACAGTTCTGTCCCATAGGTCAGAGAAGAATGCCTTATGTCAAACGAAGATAAGTAAACCTAAGGTCGATGAATGCTTCGACTTTATTTTTGGAACATTATCGAGTGTTCTTCGAGAATGGAGCCAATTACGGTCGATGGGTGTAGTTATTATATTGGCATGTACTCTCATGTTCGTTCCATCGTCTCGAGCCGTTGATGCACTCAAAACATGTACATGCTTACTAAAGGAATGCAGGCTTGAACTTGCCAAATGCATATCAAACCCATTATGTGCTGCCAATGTTGCTTGTCTCCAAACCTGCAACGATCGACCCGACGAGACTGAATGCCAGATTAAATGTGGTGACCTATTCGAAAACAGCGTCGTGGATGAATTTAATGAATGTGCAGTGTCACGAAAAAAATGTGTACCTACGAAATCCGATGTCGGGGACTTTCCTGTACCCGACCCGTCTGTTCTTGTCAAGAGTTTCAATATATCAGATTTCAGTGGGAAGTGGTTTATCACTAGTGGCTTAAATCCTACTTTTGATACGTTTGATTGTCAGTTGCATGAATTTCATGTAGAGTCTGGCAAACTTGTTGGAAATATAACGTGGAGAATACGAACTCCAGATAGCGGTTTTTTCACTCGGTCGACGACGCAGAGATTCGTGCAAGATCCCGAGCATCCTGGGATACTCTATAACCACAACAATGAGTATCTTCACTATGAGGATGACTGGTATATATTATCAAGCCAGGTGGAGAACAAACCCGACGATTACATTTTCGTATACTATCGTGGTCGGAACGACGCATGGGATGGCTACGGCGGAGCCGTTGTATACACAAGAAGCGCAGTACTGCCAGAAAGCATAGTTCCCGAGCTAGAAAGAGCAGCTAAGAGCGTAGGGAGAGACTTCAACAAGTTCATAAAAACAGACAATTCGTGTGGCCCGGAGCCGCCGCTCGTAGAAAGGCTAGAGAAGACATTGGAAAGCGGAGAACAAACAATCGTTAGGGAAGTCGAACAGATCGAACAAGAGGTGGAGAAGGAGGTCGAACAGCTCGAAAAAGAGGTGGAAACAGTAGGGAAGGCAGAGATGTCATTGGTTGAGAAGTTGGGAGAAGGTCTTAAAGAACTTCAAAGGGATGAGGAATTCTTCCTTAGAGAGTTATCTAAAGAAGAGAGTGATCTTTTGAATGAGCTTAAAATGGAAGCAAATGAGGTTGAGAGTTTGTTTGGAAGAGCACTTGCTCTTAGAAAATTAAGATAA

Protein sequence

MIVYHLTNGCNACRRKVLCYHGILVDKIYSKYFLPCKSTSTGRVCKSRSLTVLSHRSEKNALCQTKISKPKVDECFDFIFGTLSSVLREWSQLRSMGVVIILACTLMFVPSSRAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNDRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPTKSDVGDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVESGKLVGNITWRIRTPDSGFFTRSTTQRFVQDPEHPGILYNHNNEYLHYEDDWYILSSQVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPESIVPELERAAKSVGRDFNKFIKTDNSCGPEPPLVERLEKTLESGEQTIVREVEQIEQEVEKEVEQLEKEVETVGKAEMSLVEKLGEGLKELQRDEEFFLRELSKEESDLLNELKMEANEVESLFGRALALRKLR

Homology

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BLAST of Carg23470 vs. NCBI nr
Match: XP_023536777.1 (violaxanthin de-epoxidase, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 771.5 bits (1991), Expect = 1.6e-219
Identity = 371/378 (98.15%), Postives = 372/378 (98.41%), Query Frame = 0


Query: 7   TNGCNACRRKVLCYHGILVDKIYSKYFLPCKSTSTGRVCKSRSLTVLSHRSEKNALCQTK 66
           TN     RRKVLCYHGILVDKIYSKYFLPCKST TGRVCKSRSLTVLSHRSEKNALCQTK
Sbjct: 28  TNSVATTRRKVLCYHGILVDKIYSKYFLPCKSTFTGRVCKSRSLTVLSHRSEKNALCQTK 87

Query: 67  ISKPKVDECFDFIFGTLSSVLREWSQLRSMGVVIILACTLMFVPSSRAVDALKTCTCLLK 126
           ISKPKVDECFDFIFGTLSSVLREWSQLRSMGVVIILACTLMFVPSSRAVDALKTCTCLLK
Sbjct: 88  ISKPKVDECFDFIFGTLSSVLREWSQLRSMGVVIILACTLMFVPSSRAVDALKTCTCLLK 147

Query: 127 ECRLELAKCISNPLCAANVACLQTCNDRPDETECQIKCGDLFENSVVDEFNECAVSRKKC 186
           ECRLELAKCISNPLCAANVACLQTCNDRPDETECQIKCGDLFENSVVDEFNECAVSRKKC
Sbjct: 148 ECRLELAKCISNPLCAANVACLQTCNDRPDETECQIKCGDLFENSVVDEFNECAVSRKKC 207

Query: 187 VPTKSDVGDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVESGKLVG 246
           VPTKSDVGDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLH+FHVESGKLVG
Sbjct: 208 VPTKSDVGDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHDFHVESGKLVG 267

Query: 247 NITWRIRTPDSGFFTRSTTQRFVQDPEHPGILYNHNNEYLHYEDDWYILSSQVENKPDDY 306
           NITWRIRTPDSGFFTRSTTQRFVQDPEHPGILYNHNNEYLHYEDDWYILSSQVENKPDDY
Sbjct: 268 NITWRIRTPDSGFFTRSTTQRFVQDPEHPGILYNHNNEYLHYEDDWYILSSQVENKPDDY 327

Query: 307 IFVYYRGRNDAWDGYGGAVVYTRSAVLPESIVPELERAAKSVGRDFNKFIKTDNSCGPEP 366
           IFVYYRGRNDAWDGYGGAVVYTRSAVLPESIVPELERAAKSVGRDFNKFIKTDNSCGPEP
Sbjct: 328 IFVYYRGRNDAWDGYGGAVVYTRSAVLPESIVPELERAAKSVGRDFNKFIKTDNSCGPEP 387

Query: 367 PLVERLEKTLESGEQTIV 385
           PLVERLEKTLESGEQTIV
Sbjct: 388 PLVERLEKTLESGEQTIV 405

[Close]

BLAST of Carg23470 vs. NCBI nr
Match: XP_022937596.1 (violaxanthin de-epoxidase, chloroplastic [Cucurbita moschata])

HSP 1 Score: 770.0 bits (1987), Expect = 4.6e-219
Identity = 371/378 (98.15%), Postives = 372/378 (98.41%), Query Frame = 0


Query: 7   TNGCNACRRKVLCYHGILVDKIYSKYFLPCKSTSTGRVCKSRSLTVLSHRSEKNALCQTK 66
           TN     RRKVLCYHGILVDKIYSKYFLPCKSTSTGRVCKSRSLTVLSHRSEKNALCQTK
Sbjct: 28  TNSVATTRRKVLCYHGILVDKIYSKYFLPCKSTSTGRVCKSRSLTVLSHRSEKNALCQTK 87

Query: 67  ISKPKVDECFDFIFGTLSSVLREWSQLRSMGVVIILACTLMFVPSSRAVDALKTCTCLLK 126
           ISKPKVDE FDFIFGTLSSVLREWSQLRSMGVVIILACTLMFVPSSRAVDALKTCTCLLK
Sbjct: 88  ISKPKVDERFDFIFGTLSSVLREWSQLRSMGVVIILACTLMFVPSSRAVDALKTCTCLLK 147

Query: 127 ECRLELAKCISNPLCAANVACLQTCNDRPDETECQIKCGDLFENSVVDEFNECAVSRKKC 186
           ECRLELAKCISNPLCAANVACLQTCNDRPDETECQIKCGDLFENSVVDEFNECAVSRKKC
Sbjct: 148 ECRLELAKCISNPLCAANVACLQTCNDRPDETECQIKCGDLFENSVVDEFNECAVSRKKC 207

Query: 187 VPTKSDVGDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVESGKLVG 246
           VPTKSDVGDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVESGKLVG
Sbjct: 208 VPTKSDVGDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVESGKLVG 267

Query: 247 NITWRIRTPDSGFFTRSTTQRFVQDPEHPGILYNHNNEYLHYEDDWYILSSQVENKPDDY 306
           NITWRIRTPDSGFFTRSTTQRFVQDPEHPGILYNHNNEYLHYEDDWYILSSQVENKPDDY
Sbjct: 268 NITWRIRTPDSGFFTRSTTQRFVQDPEHPGILYNHNNEYLHYEDDWYILSSQVENKPDDY 327

Query: 307 IFVYYRGRNDAWDGYGGAVVYTRSAVLPESIVPELERAAKSVGRDFNKFIKTDNSCGPEP 366
           IFVYYRGRNDAWDGYGGAVVYTRSAVLPES+VPELERAAKSVGRDFNKFIKTDNSCGPEP
Sbjct: 328 IFVYYRGRNDAWDGYGGAVVYTRSAVLPESVVPELERAAKSVGRDFNKFIKTDNSCGPEP 387

Query: 367 PLVERLEKTLESGEQTIV 385
           PLVERLEKTLESGEQTIV
Sbjct: 388 PLVERLEKTLESGEQTIV 405

[Close]

BLAST of Carg23470 vs. NCBI nr
Match: XP_022965689.1 (violaxanthin de-epoxidase, chloroplastic [Cucurbita maxima])

HSP 1 Score: 768.1 bits (1982), Expect = 1.8e-218
Identity = 368/378 (97.35%), Postives = 370/378 (97.88%), Query Frame = 0


Query: 7   TNGCNACRRKVLCYHGILVDKIYSKYFLPCKSTSTGRVCKSRSLTVLSHRSEKNALCQTK 66
           TN     RRKVLCYHGILVDKIYSKYFLPCKS STGRVCKSRSLTVLSHRSEKNALCQ K
Sbjct: 28  TNSVATTRRKVLCYHGILVDKIYSKYFLPCKSISTGRVCKSRSLTVLSHRSEKNALCQRK 87

Query: 67  ISKPKVDECFDFIFGTLSSVLREWSQLRSMGVVIILACTLMFVPSSRAVDALKTCTCLLK 126
           ISKPKVDECFDFIFGTLSSVLREWSQLRSMGVVI+L CTLMFVPSSRAVDALKTCTCLLK
Sbjct: 88  ISKPKVDECFDFIFGTLSSVLREWSQLRSMGVVIVLTCTLMFVPSSRAVDALKTCTCLLK 147

Query: 127 ECRLELAKCISNPLCAANVACLQTCNDRPDETECQIKCGDLFENSVVDEFNECAVSRKKC 186
           ECRLELAKCISNPLCAANVACLQTCNDRPDETECQIKCGDLFENSVVDEFNECAVSRKKC
Sbjct: 148 ECRLELAKCISNPLCAANVACLQTCNDRPDETECQIKCGDLFENSVVDEFNECAVSRKKC 207

Query: 187 VPTKSDVGDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVESGKLVG 246
           VPTKSDVGDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVESGKL+G
Sbjct: 208 VPTKSDVGDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVESGKLIG 267

Query: 247 NITWRIRTPDSGFFTRSTTQRFVQDPEHPGILYNHNNEYLHYEDDWYILSSQVENKPDDY 306
           NITWRIRTPDSGFFTRSTTQRFVQDPEHPGILYNHNNEYLHYEDDWYILSSQVENKPDDY
Sbjct: 268 NITWRIRTPDSGFFTRSTTQRFVQDPEHPGILYNHNNEYLHYEDDWYILSSQVENKPDDY 327

Query: 307 IFVYYRGRNDAWDGYGGAVVYTRSAVLPESIVPELERAAKSVGRDFNKFIKTDNSCGPEP 366
           IFVYYRGRNDAWDGYGGAVVYTRSAVLPESIVPELERAAKSVGRDFNKFIKTDNSCGPEP
Sbjct: 328 IFVYYRGRNDAWDGYGGAVVYTRSAVLPESIVPELERAAKSVGRDFNKFIKTDNSCGPEP 387

Query: 367 PLVERLEKTLESGEQTIV 385
           PLVERLEKTLESGEQTIV
Sbjct: 388 PLVERLEKTLESGEQTIV 405

[Close]

BLAST of Carg23470 vs. NCBI nr
Match: NP_001292657.1 (violaxanthin de-epoxidase, chloroplastic [Cucumis sativus] >ADP69104.1 violaxanthin de-epoxidase [Cucumis sativus])

HSP 1 Score: 693.3 bits (1788), Expect = 5.5e-196
Identity = 331/371 (89.22%), Postives = 348/371 (93.80%), Query Frame = 0


Query: 14  RRKVLCYHGILVDKIYSKYFLPCKSTSTGRVCKSRSLTVLSHRSEKNALCQTKISKPKVD 73
           RRKVLCY GILVDKIYSKY   CKSTSTGR  KSRSL + SHR EK  LC+ KISK KVD
Sbjct: 32  RRKVLCYQGILVDKIYSKY--SCKSTSTGRFSKSRSLAIPSHRPEKTVLCEMKISKYKVD 91

Query: 74  ECFDFIFGTLSSVLREWSQLRSMGVVIILACTLMFVPSSRAVDALKTCTCLLKECRLELA 133
           ECFDFIFG   S L+EWSQ++S+G+V+IL CT MF+PS++AVDALKTCTCLLKECRLELA
Sbjct: 92  ECFDFIFGKSLSFLQEWSQIQSVGIVVILTCTFMFIPSAQAVDALKTCTCLLKECRLELA 151

Query: 134 KCISNPLCAANVACLQTCNDRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPTKSDV 193
           KCISNPLCAANVACLQTCN+RPDETECQIKCGDLFENSVVDEFNECAVSRKKCVP KSDV
Sbjct: 152 KCISNPLCAANVACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDV 211

Query: 194 GDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVESGKLVGNITWRIR 253
           GDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHV++GKLVGNITWRIR
Sbjct: 212 GDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVDNGKLVGNITWRIR 271

Query: 254 TPDSGFFTRSTTQRFVQDPEHPGILYNHNNEYLHYEDDWYILSSQVENKPDDYIFVYYRG 313
           TPDSGFFTRST QRFVQDPE PGILYNHNNEYLHYEDDWYILSS+VENKPDDYIFVYYRG
Sbjct: 272 TPDSGFFTRSTMQRFVQDPERPGILYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRG 331

Query: 314 RNDAWDGYGGAVVYTRSAVLPESIVPELERAAKSVGRDFNKFIKTDNSCGPEPPLVERLE 373
           RNDAWDGYGGAVVYTRSAVLPESIVPELERAA SVGRDFNKFI+TDNSCGPEPPLVERLE
Sbjct: 332 RNDAWDGYGGAVVYTRSAVLPESIVPELERAANSVGRDFNKFIRTDNSCGPEPPLVERLE 391

Query: 374 KTLESGEQTIV 385
           KTLESGE+TIV
Sbjct: 392 KTLESGEKTIV 400

[Close]

BLAST of Carg23470 vs. NCBI nr
Match: KGN61328.1 (hypothetical protein Csa_2G083740 [Cucumis sativus])

HSP 1 Score: 693.3 bits (1788), Expect = 5.5e-196
Identity = 331/371 (89.22%), Postives = 348/371 (93.80%), Query Frame = 0


Query: 14  RRKVLCYHGILVDKIYSKYFLPCKSTSTGRVCKSRSLTVLSHRSEKNALCQTKISKPKVD 73
           RRKVLCY GILVDKIYSKY   CKSTSTGR  KSRSL + SHR EK  LC+ KISK KVD
Sbjct: 32  RRKVLCYQGILVDKIYSKY--SCKSTSTGRFSKSRSLAIPSHRPEKTVLCEMKISKYKVD 91

Query: 74  ECFDFIFGTLSSVLREWSQLRSMGVVIILACTLMFVPSSRAVDALKTCTCLLKECRLELA 133
           ECFDFIFG   S L+EWSQ++S+G+V+IL CT MF+PS++AVDALKTCTCLLKECRLELA
Sbjct: 92  ECFDFIFGKSLSFLQEWSQIQSVGIVVILTCTFMFIPSAQAVDALKTCTCLLKECRLELA 151

Query: 134 KCISNPLCAANVACLQTCNDRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPTKSDV 193
           KCISNPLCAANVACLQTCN+RPDETECQIKCGDLFENSVVDEFNECAVSRKKCVP KSDV
Sbjct: 152 KCISNPLCAANVACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDV 211

Query: 194 GDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVESGKLVGNITWRIR 253
           GDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHV++GKLVGNITWRIR
Sbjct: 212 GDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVDNGKLVGNITWRIR 271

Query: 254 TPDSGFFTRSTTQRFVQDPEHPGILYNHNNEYLHYEDDWYILSSQVENKPDDYIFVYYRG 313
           TPDSGFFTRST QRFVQDPE PGILYNHNNEYLHYEDDWYILSS+VENKPDDYIFVYYRG
Sbjct: 272 TPDSGFFTRSTMQRFVQDPERPGILYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRG 331

Query: 314 RNDAWDGYGGAVVYTRSAVLPESIVPELERAAKSVGRDFNKFIKTDNSCGPEPPLVERLE 373
           RNDAWDGYGGAVVYTRSAVLPESIVPELERAA SVGRDFNKFI+TDNSCGPEPPLVERLE
Sbjct: 332 RNDAWDGYGGAVVYTRSAVLPESIVPELERAANSVGRDFNKFIRTDNSCGPEPPLVERLE 391

Query: 374 KTLESGEQTIV 385
           KTLESGE+TIV
Sbjct: 392 KTLESGEKTIV 400

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BLAST of Carg23470 vs. TAIR10
Match: AT1G08550.1 (non-photochemical quenching 1)

HSP 1 Score: 507.3 bits (1305), Expect = 1.0e-143
Identity = 234/309 (75.73%), Postives = 271/309 (87.70%), Query Frame = 0


Query: 76  FDFIFGTLSSVLREWSQLRSMGVVIILACTLMFVPSSRAVDALKTCTCLLKECRLELAKC 135
           FD +     + L+E +    + +V +LAC  + VPS+ AVDALKTC CLLK CR+ELAKC
Sbjct: 75  FDIVPLPSKNELKELTAPLLLKLVGVLACAFLIVPSADAVDALKTCACLLKGCRIELAKC 134

Query: 136 ISNPLCAANVACLQTCNDRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPTKSDVGD 195
           I+NP CAANVACLQTCN+RPDETECQIKCGDLFENSVVDEFNECAVSRKKCVP KSD+G+
Sbjct: 135 IANPACAANVACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPRKSDLGE 194

Query: 196 FPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVE-SGKLVGNITWRIRT 255
           FP PDPSVLV++FNISDF+GKW+ITSGLNPTFD FDCQLHEFH E   KLVGNI+WRI+T
Sbjct: 195 FPAPDPSVLVQNFNISDFNGKWYITSGLNPTFDAFDCQLHEFHTEGDNKLVGNISWRIKT 254

Query: 256 PDSGFFTRSTTQRFVQDPEHPGILYNHNNEYLHYEDDWYILSSQVENKPDDYIFVYYRGR 315
            DSGFFTRS  Q+FVQDP  PG+LYNH+NEYLHY+DDWYILSS++ENKP+DYIFVYYRGR
Sbjct: 255 LDSGFFTRSAVQKFVQDPNQPGVLYNHDNEYLHYQDDWYILSSKIENKPEDYIFVYYRGR 314

Query: 316 NDAWDGYGGAVVYTRSAVLPESIVPELERAAKSVGRDFNKFIKTDNSCGPEPPLVERLEK 375
           NDAWDGYGGAVVYTRS+VLP SI+PELE+AAKS+GRDF+ FI+TDN+CGPEP LVER+EK
Sbjct: 315 NDAWDGYGGAVVYTRSSVLPNSIIPELEKAAKSIGRDFSTFIRTDNTCGPEPALVERIEK 374

Query: 376 TLESGEQTI 384
           T+E GE+ I
Sbjct: 375 TVEEGERII 383

[Close]

BLAST of Carg23470 vs. TAIR10
Match: AT2G21860.1 (violaxanthin de-epoxidase-related)

HSP 1 Score: 65.1 bits (157), Expect = 1.3e-10
Identity = 62/278 (22.30%), Postives = 101/278 (36.33%), Query Frame = 0


Query: 120 TCTCLLKECRLELAKCISNPLCAANVACLQTCNDRPDETECQIKCGDLFENSVVDEFNEC 179
           T +C++K C  ++  C+ +P C   + CL  C+  P +  C  +C   +E    + F+ C
Sbjct: 237 TLSCMVKNCGPQILNCLLDPNCRKALQCLNQCS--PVDQVCSYRCIASYEGPYFEAFSLC 296

Query: 180 AVSRKKCVPTKSDVGDFPVPDPSVLVKSFN-------------ISDFSGKWFITSGLNPT 239
            + +  C+   + + + P   P    +                + +    W + +G NP 
Sbjct: 297 VLQKHNCLELDAKIPEKPYVPPMTSFRGKELCHDTAEDLFVGWLGELEWSWRVVAGQNPA 356

Query: 240 FDTFDCQLHEFHVESGK-------------LVGNITWRIRTPDSGFFTRSTTQRFVQDPE 299
           +D F CQ   F+   GK             L   + WR R           T RF     
Sbjct: 357 YDQFPCQYQLFYRGKGKSSFWYEPVFQVRTLEEKLVWRRRRYSVKRGKIPATFRF----- 416

Query: 300 HPGILYNH--NNEYLHYEDDWYILSSQVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSA 359
              +L N   +NE+      W I+   V +     +F Y+     A   Y GAV+ T   
Sbjct: 417 --SVLDNGVVSNEF------WTIV--DVSDDLSWGLFHYHGAARVAGQSYTGAVLVTPDG 476

Query: 360 VLP-ESIVPELERAAKSVGRDFNKFIKTDNSCGPEPPL 369
             P E     L+ A +  G    +    DN     PPL
Sbjct: 477 SYPAEKDKERLQSALEKCGIKEWELFAVDNCSCENPPL 497

[Close]

BLAST of Carg23470 vs. Swiss-Prot
Match: sp|Q9SM43|VDE_SPIOL (Violaxanthin de-epoxidase, chloroplastic OS=Spinacia oleracea OX=3562 GN=VDE1 PE=1 SV=2)

HSP 1 Score: 516.2 bits (1328), Expect = 3.9e-145
Identity = 231/299 (77.26%), Postives = 272/299 (90.97%), Query Frame = 0


Query: 88  REWS--QLRSMGVVIILACTLMFVPSSRAVDALKTCTCLLKECRLELAKCISNPLCAANV 147
           ++W+  +L+ + V  I+ACT   + S++AVDALKTCTCLLKECR+ELAKCI+NP CAANV
Sbjct: 96  KKWNLLKLKVVEVTAIVACTFFVMSSAQAVDALKTCTCLLKECRIELAKCIANPSCAANV 155

Query: 148 ACLQTCNDRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPTKSDVGDFPVPDPSVLV 207
           ACLQTCN+RPDETECQIKCGDLF N VVDEFNECAVSRKKCVP KSDVG+FPVPDPSVLV
Sbjct: 156 ACLQTCNNRPDETECQIKCGDLFANKVVDEFNECAVSRKKCVPQKSDVGEFPVPDPSVLV 215

Query: 208 KSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVESGKLVGNITWRIRTPDSGFFTRSTT 267
           KSFN++DF+GKWFI+SGLNPTFD FDCQLHEFH+E GKLVGN++WRI+TPD GFFTR+  
Sbjct: 216 KSFNMADFNGKWFISSGLNPTFDAFDCQLHEFHLEDGKLVGNLSWRIKTPDGGFFTRTAV 275

Query: 268 QRFVQDPEHPGILYNHNNEYLHYEDDWYILSSQVENKPDDYIFVYYRGRNDAWDGYGGAV 327
           Q+F QDP  PG+LYNH+N YLHY+DDWYILSS++EN+PDDY+FVYYRGRNDAWDGYGGA 
Sbjct: 276 QKFAQDPSQPGMLYNHDNAYLHYQDDWYILSSKIENQPDDYVFVYYRGRNDAWDGYGGAF 335

Query: 328 VYTRSAVLPESIVPELERAAKSVGRDFNKFIKTDNSCGPEPPLVERLEKTLESGEQTIV 385
           +YTRSA +PE+IVPEL RAA+SVG+DFNKFI+TDN+CGPEPPLVERLEKT+E GE+TI+
Sbjct: 336 LYTRSATVPENIVPELNRAAQSVGKDFNKFIRTDNTCGPEPPLVERLEKTVEEGERTII 394

[Close]

BLAST of Carg23470 vs. Swiss-Prot
Match: sp|Q40251|VDE_LACSA (Violaxanthin de-epoxidase, chloroplastic OS=Lactuca sativa OX=4236 GN=VDE1 PE=1 SV=1)

HSP 1 Score: 513.1 bits (1320), Expect = 3.3e-144
Identity = 238/339 (70.21%), Postives = 280/339 (82.60%), Query Frame = 0


Query: 46  KSRSLTVLSHRSEKNALCQTKISKPKVDECFDFIFGTLSSVLREWSQLRSMGVVIILACT 105
           K+ S +  SH  +K+ +C    S  ++   FD   G    + ++W Q   + + I+L CT
Sbjct: 60  KTSSFSDSSHCKDKSQICSIDTSFEEIQR-FDLKRGMTLILEKQWRQF--IQLAIVLVCT 119

Query: 106 LMFVPSSRAVDALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNDRPDETECQIKCG 165
            + VP   AVDALKTC CLLKECR+ELAKCI+NP CAANVACLQTCN+RPDETECQIKCG
Sbjct: 120 FVIVPRVDAVDALKTCACLLKECRIELAKCIANPSCAANVACLQTCNNRPDETECQIKCG 179

Query: 166 DLFENSVVDEFNECAVSRKKCVPTKSDVGDFPVPDPSVLVKSFNISDFSGKWFITSGLNP 225
           DLFENSVVD+FNECAVSRKKCVP KSDVG+FPVPD + +V++FN+ DFSGKW+ITSGLNP
Sbjct: 180 DLFENSVVDQFNECAVSRKKCVPRKSDVGEFPVPDRNAVVQNFNMKDFSGKWYITSGLNP 239

Query: 226 TFDTFDCQLHEFHVESGKLVGNITWRIRTPDSGFFTRSTTQRFVQDPEHPGILYNHNNEY 285
           TFD FDCQLHEFH+E+ KLVGN+TWRI+T D GFFTRS  Q FVQDP+ PG LYNH+NE+
Sbjct: 240 TFDAFDCQLHEFHMENDKLVGNLTWRIKTLDGGFFTRSAVQTFVQDPDLPGALYNHDNEF 299

Query: 286 LHYEDDWYILSSQVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPESIVPELERAA 345
           LHY+DDWYILSSQ+ENKPDDYIFVYYRGRNDAWDGYGG+V+YTRS  LPESI+P L++AA
Sbjct: 300 LHYQDDWYILSSQIENKPDDYIFVYYRGRNDAWDGYGGSVIYTRSPTLPESIIPNLQKAA 359

Query: 346 KSVGRDFNKFIKTDNSCGPEPPLVERLEKTLESGEQTIV 385
           KSVGRDFN FI TDNSCGPEPPLVERLEKT E GE+ ++
Sbjct: 360 KSVGRDFNNFITTDNSCGPEPPLVERLEKTAEEGEKLLI 395

[Close]

BLAST of Carg23470 vs. Swiss-Prot
Match: sp|Q39249|VDE_ARATH (Violaxanthin de-epoxidase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VDE1 PE=1 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 1.8e-142
Identity = 234/309 (75.73%), Postives = 271/309 (87.70%), Query Frame = 0


Query: 76  FDFIFGTLSSVLREWSQLRSMGVVIILACTLMFVPSSRAVDALKTCTCLLKECRLELAKC 135
           FD +     + L+E +    + +V +LAC  + VPS+ AVDALKTC CLLK CR+ELAKC
Sbjct: 75  FDIVPLPSKNELKELTAPLLLKLVGVLACAFLIVPSADAVDALKTCACLLKGCRIELAKC 134

Query: 136 ISNPLCAANVACLQTCNDRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPTKSDVGD 195
           I+NP CAANVACLQTCN+RPDETECQIKCGDLFENSVVDEFNECAVSRKKCVP KSD+G+
Sbjct: 135 IANPACAANVACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPRKSDLGE 194

Query: 196 FPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVE-SGKLVGNITWRIRT 255
           FP PDPSVLV++FNISDF+GKW+ITSGLNPTFD FDCQLHEFH E   KLVGNI+WRI+T
Sbjct: 195 FPAPDPSVLVQNFNISDFNGKWYITSGLNPTFDAFDCQLHEFHTEGDNKLVGNISWRIKT 254

Query: 256 PDSGFFTRSTTQRFVQDPEHPGILYNHNNEYLHYEDDWYILSSQVENKPDDYIFVYYRGR 315
            DSGFFTRS  Q+FVQDP  PG+LYNH+NEYLHY+DDWYILSS++ENKP+DYIFVYYRGR
Sbjct: 255 LDSGFFTRSAVQKFVQDPNQPGVLYNHDNEYLHYQDDWYILSSKIENKPEDYIFVYYRGR 314

Query: 316 NDAWDGYGGAVVYTRSAVLPESIVPELERAAKSVGRDFNKFIKTDNSCGPEPPLVERLEK 375
           NDAWDGYGGAVVYTRS+VLP SI+PELE+AAKS+GRDF+ FI+TDN+CGPEP LVER+EK
Sbjct: 315 NDAWDGYGGAVVYTRSSVLPNSIIPELEKAAKSIGRDFSTFIRTDNTCGPEPALVERIEK 374

Query: 376 TLESGEQTI 384
           T+E GE+ I
Sbjct: 375 TVEEGERII 383

[Close]

BLAST of Carg23470 vs. Swiss-Prot
Match: sp|Q40593|VDE_TOBAC (Violaxanthin de-epoxidase, chloroplastic OS=Nicotiana tabacum OX=4097 GN=VDE1 PE=2 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 6.5e-140
Identity = 245/369 (66.40%), Postives = 279/369 (75.61%), Query Frame = 0


Query: 20  YHGILVDKIYSKYFLPCKSTSTGRVC---KSRSLTVLSH-RSEKNALCQTKISKPKVDEC 79
           +  I+V KI S   +P     + R+C    SR L + SH +   +       + PK +  
Sbjct: 38  FGSIVVAKICSSRRIPRYFRKSPRICCGLDSRGLQLFSHGKHNLSPAHSINQNVPKGNSG 97

Query: 80  FDFIFGTLSSVLREWSQLRSMGVVIILACTLMFVPSSRAVDALKTCTCLLKECRLELAKC 139
             F       V  +W Q                        ALKTCTCLLKECRLELAKC
Sbjct: 98  CKFPKDVALMVWEKWGQFAK--XXXXXXXXXXXXXXXXXXXALKTCTCLLKECRLELAKC 157

Query: 140 ISNPLCAANVACLQTCNDRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPTKSDVGD 199
           ISNP CAANVACLQTCN+RPDETECQIKCGDLFENSVVDEFNECAVSRKKCVP KSDVGD
Sbjct: 158 ISNPACAANVACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPRKSDVGD 217

Query: 200 FPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVESGKLVGNITWRIRTP 259
           FPVPDPSVLV+ F++ DFSGKWFIT GLNPTFD FDCQLHEFH E  KLVGN++WRIRTP
Sbjct: 218 FPVPDPSVLVQKFDMKDFSGKWFITRGLNPTFDAFDCQLHEFHTEENKLVGNLSWRIRTP 277

Query: 260 DSGFFTRSTTQRFVQDPEHPGILYNHNNEYLHYEDDWYILSSQVENKPDDYIFVYYRGRN 319
           D GFFTRS  Q+FVQDP++PGILYNH+NEYL Y+DDWYILSS+VEN P+DYIFVYY+GRN
Sbjct: 278 DGGFFTRSAVQKFVQDPKYPGILYNHDNEYLLYQDDWYILSSKVENSPEDYIFVYYKGRN 337

Query: 320 DAWDGYGGAVVYTRSAVLPESIVPELERAAKSVGRDFNKFIKTDNSCGPEPPLVERLEKT 379
           DAWDGYGG+V+YTRSAVLPESI+PEL+ AA+ VGRDFN FIKTDN+CGPEPPLVERLEK 
Sbjct: 338 DAWDGYGGSVLYTRSAVLPESIIPELQTAAQKVGRDFNTFIKTDNTCGPEPPLVERLEKK 397

Query: 380 LESGEQTIV 385
           +E GE+TI+
Sbjct: 398 VEEGERTII 404

[Close]

BLAST of Carg23470 vs. TrEMBL
Match: tr|A0A0A0LHQ2|A0A0A0LHQ2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G083740 PE=3 SV=1)

HSP 1 Score: 693.3 bits (1788), Expect = 3.6e-196
Identity = 331/371 (89.22%), Postives = 348/371 (93.80%), Query Frame = 0


Query: 14  RRKVLCYHGILVDKIYSKYFLPCKSTSTGRVCKSRSLTVLSHRSEKNALCQTKISKPKVD 73
           RRKVLCY GILVDKIYSKY   CKSTSTGR  KSRSL + SHR EK  LC+ KISK KVD
Sbjct: 32  RRKVLCYQGILVDKIYSKY--SCKSTSTGRFSKSRSLAIPSHRPEKTVLCEMKISKYKVD 91

Query: 74  ECFDFIFGTLSSVLREWSQLRSMGVVIILACTLMFVPSSRAVDALKTCTCLLKECRLELA 133
           ECFDFIFG   S L+EWSQ++S+G+V+IL CT MF+PS++AVDALKTCTCLLKECRLELA
Sbjct: 92  ECFDFIFGKSLSFLQEWSQIQSVGIVVILTCTFMFIPSAQAVDALKTCTCLLKECRLELA 151

Query: 134 KCISNPLCAANVACLQTCNDRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPTKSDV 193
           KCISNPLCAANVACLQTCN+RPDETECQIKCGDLFENSVVDEFNECAVSRKKCVP KSDV
Sbjct: 152 KCISNPLCAANVACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDV 211

Query: 194 GDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVESGKLVGNITWRIR 253
           GDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHV++GKLVGNITWRIR
Sbjct: 212 GDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVDNGKLVGNITWRIR 271

Query: 254 TPDSGFFTRSTTQRFVQDPEHPGILYNHNNEYLHYEDDWYILSSQVENKPDDYIFVYYRG 313
           TPDSGFFTRST QRFVQDPE PGILYNHNNEYLHYEDDWYILSS+VENKPDDYIFVYYRG
Sbjct: 272 TPDSGFFTRSTMQRFVQDPERPGILYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRG 331

Query: 314 RNDAWDGYGGAVVYTRSAVLPESIVPELERAAKSVGRDFNKFIKTDNSCGPEPPLVERLE 373
           RNDAWDGYGGAVVYTRSAVLPESIVPELERAA SVGRDFNKFI+TDNSCGPEPPLVERLE
Sbjct: 332 RNDAWDGYGGAVVYTRSAVLPESIVPELERAANSVGRDFNKFIRTDNSCGPEPPLVERLE 391

Query: 374 KTLESGEQTIV 385
           KTLESGE+TIV
Sbjct: 392 KTLESGEKTIV 400

[Close]

BLAST of Carg23470 vs. TrEMBL
Match: tr|E5FPU5|E5FPU5_CUCSA (Violaxanthin de-epoxidase OS=Cucumis sativus OX=3659 GN=VDE PE=2 SV=1)

HSP 1 Score: 693.3 bits (1788), Expect = 3.6e-196
Identity = 331/371 (89.22%), Postives = 348/371 (93.80%), Query Frame = 0


Query: 14  RRKVLCYHGILVDKIYSKYFLPCKSTSTGRVCKSRSLTVLSHRSEKNALCQTKISKPKVD 73
           RRKVLCY GILVDKIYSKY   CKSTSTGR  KSRSL + SHR EK  LC+ KISK KVD
Sbjct: 32  RRKVLCYQGILVDKIYSKY--SCKSTSTGRFSKSRSLAIPSHRPEKTVLCEMKISKYKVD 91

Query: 74  ECFDFIFGTLSSVLREWSQLRSMGVVIILACTLMFVPSSRAVDALKTCTCLLKECRLELA 133
           ECFDFIFG   S L+EWSQ++S+G+V+IL CT MF+PS++AVDALKTCTCLLKECRLELA
Sbjct: 92  ECFDFIFGKSLSFLQEWSQIQSVGIVVILTCTFMFIPSAQAVDALKTCTCLLKECRLELA 151

Query: 134 KCISNPLCAANVACLQTCNDRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPTKSDV 193
           KCISNPLCAANVACLQTCN+RPDETECQIKCGDLFENSVVDEFNECAVSRKKCVP KSDV
Sbjct: 152 KCISNPLCAANVACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDV 211

Query: 194 GDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVESGKLVGNITWRIR 253
           GDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHV++GKLVGNITWRIR
Sbjct: 212 GDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVDNGKLVGNITWRIR 271

Query: 254 TPDSGFFTRSTTQRFVQDPEHPGILYNHNNEYLHYEDDWYILSSQVENKPDDYIFVYYRG 313
           TPDSGFFTRST QRFVQDPE PGILYNHNNEYLHYEDDWYILSS+VENKPDDYIFVYYRG
Sbjct: 272 TPDSGFFTRSTMQRFVQDPERPGILYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRG 331

Query: 314 RNDAWDGYGGAVVYTRSAVLPESIVPELERAAKSVGRDFNKFIKTDNSCGPEPPLVERLE 373
           RNDAWDGYGGAVVYTRSAVLPESIVPELERAA SVGRDFNKFI+TDNSCGPEPPLVERLE
Sbjct: 332 RNDAWDGYGGAVVYTRSAVLPESIVPELERAANSVGRDFNKFIRTDNSCGPEPPLVERLE 391

Query: 374 KTLESGEQTIV 385
           KTLESGE+TIV
Sbjct: 392 KTLESGEKTIV 400

[Close]

BLAST of Carg23470 vs. TrEMBL
Match: tr|A0A1S3B4A9|A0A1S3B4A9_CUCME (violaxanthin de-epoxidase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485865 PE=3 SV=1)

HSP 1 Score: 682.6 bits (1760), Expect = 6.4e-193
Identity = 329/371 (88.68%), Postives = 347/371 (93.53%), Query Frame = 0


Query: 14  RRKVLCYHGILVDKIYSKYFLPCKSTSTGRVCKSRSLTVLSHRSEKNALCQTKISKPKVD 73
           RRKVLCY GIL +KIYSKY    KSTSTGR  KSRSL + SHR EK ALC+ KISK KVD
Sbjct: 30  RRKVLCYQGIL-EKIYSKY--SWKSTSTGRFSKSRSLAIPSHRPEKTALCEMKISKYKVD 89

Query: 74  ECFDFIFGTLSSVLREWSQLRSMGVVIILACTLMFVPSSRAVDALKTCTCLLKECRLELA 133
           ECFDFIFG   S L+EWSQ++S+G+V+IL CT MF+PSS+AVDALKTCTCLLKECRLELA
Sbjct: 90  ECFDFIFGKSLSFLQEWSQIQSVGIVVILTCTFMFIPSSQAVDALKTCTCLLKECRLELA 149

Query: 134 KCISNPLCAANVACLQTCNDRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPTKSDV 193
           KCISNPLCAANVACLQTCN+RPDETECQIKCGDLFENSVVDEFNECAVSRKKCVP KSDV
Sbjct: 150 KCISNPLCAANVACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPMKSDV 209

Query: 194 GDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVESGKLVGNITWRIR 253
           GDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHV++GKLVGNITWRIR
Sbjct: 210 GDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHVDNGKLVGNITWRIR 269

Query: 254 TPDSGFFTRSTTQRFVQDPEHPGILYNHNNEYLHYEDDWYILSSQVENKPDDYIFVYYRG 313
           TPDSGFFTRST QRFVQDP+ PGILYNHNNEYLHYEDDWYILSS+VENKPDDYIFVYYRG
Sbjct: 270 TPDSGFFTRSTIQRFVQDPDSPGILYNHNNEYLHYEDDWYILSSKVENKPDDYIFVYYRG 329

Query: 314 RNDAWDGYGGAVVYTRSAVLPESIVPELERAAKSVGRDFNKFIKTDNSCGPEPPLVERLE 373
           RNDAWDGYGGAVVYTRSAVLPESIVPELERAA SVGRDFNKFI+TDNSCGPEPPLVERLE
Sbjct: 330 RNDAWDGYGGAVVYTRSAVLPESIVPELERAANSVGRDFNKFIRTDNSCGPEPPLVERLE 389

Query: 374 KTLESGEQTIV 385
           KTLESGE+TIV
Sbjct: 390 KTLESGEKTIV 397

[Close]

BLAST of Carg23470 vs. TrEMBL
Match: tr|I7EUP9|I7EUP9_VITVI (Violaxanthin de-epoxidase 1 OS=Vitis vinifera OX=29760 GN=VDE1 PE=2 SV=1)

HSP 1 Score: 580.1 bits (1494), Expect = 4.5e-162
Identity = 275/389 (70.69%), Postives = 326/389 (83.80%), Query Frame = 0


Query: 6   LTNGCNACRRKVLCYHGILVDKIYSKYFLPCKSTSTGRVCK---------SRSLTVLSHR 65
           L  G    R+  +  HG+++ K+ SK    C+S+   ++ +         S+    LSHR
Sbjct: 24  LKRGERFLRKGPVHVHGVVMIKVSSK----CRSSRHSKLLRSYRNCIQVESKYPNFLSHR 83

Query: 66  SEK-NALCQTKISKPKVDECFDFIFGTLSSVLREWSQLRSMGVVIILACTLMFVPSSRAV 125
           + K + +C +    P+V+E F+F   T+ ++L++WSQL  M VV +LACT++ +PS+ AV
Sbjct: 84  THKISPMCGSNNIIPEVEEVFEFPVATVLNLLKKWSQLHFMKVVGVLACTMLLIPSANAV 143

Query: 126 DALKTCTCLLKECRLELAKCISNPLCAANVACLQTCNDRPDETECQIKCGDLFENSVVDE 185
           DALKTCTCLLKECRLELAKCI+NP CAANVACLQTCN+RPDETECQIKCGDLFEN+VVDE
Sbjct: 144 DALKTCTCLLKECRLELAKCIANPSCAANVACLQTCNNRPDETECQIKCGDLFENNVVDE 203

Query: 186 FNECAVSRKKCVPTKSDVGDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLH 245
           FNECAVSRKKCVP KSD+G+FPVPDP+VLVKSFNI+DFSGKWFITSGLNPTFDTFDCQLH
Sbjct: 204 FNECAVSRKKCVPRKSDIGEFPVPDPAVLVKSFNIADFSGKWFITSGLNPTFDTFDCQLH 263

Query: 246 EFHVESGKLVGNITWRIRTPDSGFFTRSTTQRFVQDPEHPGILYNHNNEYLHYEDDWYIL 305
           EFH ES KLV N++WRIRTPD GFFTRST QRFVQDP  PGILYNH+NEYLHY+DDWY+L
Sbjct: 264 EFHTESNKLVRNLSWRIRTPDGGFFTRSTMQRFVQDPNQPGILYNHDNEYLHYQDDWYVL 323

Query: 306 SSQVENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPESIVPELERAAKSVGRDFNKF 365
           SS++ENKPDDY+FVYY+GRNDAWDGYGGAVVYTRSA LPESIVPELE+AAKSVGRDFNKF
Sbjct: 324 SSKIENKPDDYVFVYYQGRNDAWDGYGGAVVYTRSATLPESIVPELEKAAKSVGRDFNKF 383

Query: 366 IKTDNSCGPEPPLVERLEKTLESGEQTIV 385
           I+TDN+CGPEPPLVERLEKT+E GE+TI+
Sbjct: 384 IRTDNTCGPEPPLVERLEKTVEEGEKTII 408

[Close]

BLAST of Carg23470 vs. TrEMBL
Match: tr|A0A061F253|A0A061F253_THECC (Non-photochemical quenching 1 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_026037 PE=4 SV=1)

HSP 1 Score: 577.4 bits (1487), Expect = 2.9e-161
Identity = 273/385 (70.91%), Postives = 321/385 (83.38%), Query Frame = 0


Query: 6   LTNGCNACRRKVLCYHGILVDKIYS-----KYFLPCKSTSTGRVCKSRSLTVLSHRSEKN 65
           LT+     RR++  +HGI++ KI S     +Y    KS         R    LS R ++N
Sbjct: 25  LTSNERFHRRQIAHFHGIMLVKIQSSGRKARYSQLNKSNPNYSASDLRCSNQLSRRKDRN 84

Query: 66  -ALCQTKISKPKVDECFDFIFGTLSSVLREWSQLRSMGVVIILACTLMFVPSSRAVDALK 125
            + C     +PK +E F F+  T+S+VL+EWSQ + + VV +LAC  + +PS+ AVDALK
Sbjct: 85  FSSCSCNRRRPKAEEAFAFLVPTISNVLKEWSQSKIVKVVGLLACAYLVIPSASAVDALK 144

Query: 126 TCTCLLKECRLELAKCISNPLCAANVACLQTCNDRPDETECQIKCGDLFENSVVDEFNEC 185
           TCTCLLKECR+ELAKCI+NP CAAN+ACLQTCNDRPDETECQIKCGDLFENSVVDEFNEC
Sbjct: 145 TCTCLLKECRIELAKCIANPSCAANIACLQTCNDRPDETECQIKCGDLFENSVVDEFNEC 204

Query: 186 AVSRKKCVPTKSDVGDFPVPDPSVLVKSFNISDFSGKWFITSGLNPTFDTFDCQLHEFHV 245
           AVSRKKCVP KSD+G+FPVP P+VLVK+FNI+DFSGKWFI+SGLNPTFDTFDCQLHEFH 
Sbjct: 205 AVSRKKCVPQKSDIGEFPVPSPAVLVKNFNIADFSGKWFISSGLNPTFDTFDCQLHEFHT 264

Query: 246 ESGKLVGNITWRIRTPDSGFFTRSTTQRFVQDPEHPGILYNHNNEYLHYEDDWYILSSQV 305
           E+GKLVGN++WRI TPD GFFTRST QRFVQDP +PGILYNH+NEYLHY+DDWYI+SS++
Sbjct: 265 EAGKLVGNLSWRIGTPDGGFFTRSTLQRFVQDPNYPGILYNHDNEYLHYQDDWYIISSKI 324

Query: 306 ENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPESIVPELERAAKSVGRDFNKFIKTD 365
           ENK DDYIFVYY+GRNDAWDGYGGAVVYTRSAVLPESIVPELE+AAK+VGRDFNKFI+TD
Sbjct: 325 ENKQDDYIFVYYQGRNDAWDGYGGAVVYTRSAVLPESIVPELEKAAKNVGRDFNKFIRTD 384

Query: 366 NSCGPEPPLVERLEKTLESGEQTIV 385
           N+CGPEPPLVERLEK +E GEQT++
Sbjct: 385 NTCGPEPPLVERLEKKVEEGEQTLI 409

The following BLAST results are available for this feature:

BLAST of Carg23470 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023536777.1	1.6e-219	98.15	violaxanthin de-epoxidase, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022937596.1	4.6e-219	98.15	violaxanthin de-epoxidase, chloroplastic [Cucurbita moschata]	[more]
XP_022965689.1	1.8e-218	97.35	violaxanthin de-epoxidase, chloroplastic [Cucurbita maxima]	[more]
NP_001292657.1	5.5e-196	89.22	violaxanthin de-epoxidase, chloroplastic [Cucumis sativus] >ADP69104.1 violaxant...	[more]
KGN61328.1	5.5e-196	89.22	hypothetical protein Csa_2G083740 [Cucumis sativus]	[more]

BLAST of Carg23470 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08550.1	1.0e-143	75.73	non-photochemical quenching 1	[more]
AT2G21860.1	1.3e-10	22.30	violaxanthin de-epoxidase-related	[more]

BLAST of Carg23470 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SM43\|VDE_SPIOL	3.9e-145	77.26	Violaxanthin de-epoxidase, chloroplastic OS=Spinacia oleracea OX=3562 GN=VDE1 PE...	[more]
sp\|Q40251\|VDE_LACSA	3.3e-144	70.21	Violaxanthin de-epoxidase, chloroplastic OS=Lactuca sativa OX=4236 GN=VDE1 PE=1 ...	[more]
sp\|Q39249\|VDE_ARATH	1.8e-142	75.73	Violaxanthin de-epoxidase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VDE1...	[more]
sp\|Q40593\|VDE_TOBAC	6.5e-140	66.40	Violaxanthin de-epoxidase, chloroplastic OS=Nicotiana tabacum OX=4097 GN=VDE1 PE...	[more]

BLAST of Carg23470 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LHQ2\|A0A0A0LHQ2_CUCSA	3.6e-196	89.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G083740 PE=3 SV=1	[more]
tr\|E5FPU5\|E5FPU5_CUCSA	3.6e-196	89.22	Violaxanthin de-epoxidase OS=Cucumis sativus OX=3659 GN=VDE PE=2 SV=1	[more]
tr\|A0A1S3B4A9\|A0A1S3B4A9_CUCME	6.4e-193	88.68	violaxanthin de-epoxidase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103485865...	[more]
tr\|I7EUP9\|I7EUP9_VITVI	4.5e-162	70.69	Violaxanthin de-epoxidase 1 OS=Vitis vinifera OX=29760 GN=VDE1 PE=2 SV=1	[more]
tr\|A0A061F253\|A0A061F253_THECC	2.9e-161	70.91	Non-photochemical quenching 1 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_026037...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0046422	violaxanthin de-epoxidase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **Cellular Component**
Term	Definition
GO:0009507	chloroplast

Vocabulary: **INTERPRO**
Term	Definition
IPR022272	Lipocalin_CS
IPR012674	Calycin
IPR010788	VDE

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0046422	violaxanthin de-epoxidase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23470-RA	Carg23470-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 369..411
None	No IPR available	COILS	Coil	Coil	coord: 423..458
None	No IPR available	PANTHER	PTHR33970	FAMILY NOT NAMED	coord: 47..469
None	No IPR available	PANTHER	PTHR33970:SF1	VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC	coord: 47..469
IPR010788	VDE lipocalin domain	PFAM	PF07137	VDE	coord: 175..372 e-value: 2.3E-119 score: 396.5
IPR012674	Calycin	GENE3D	G3DSA:2.40.128.20		coord: 191..371 e-value: 6.3E-70 score: 236.7
IPR012674	Calycin	SUPERFAMILY	SSF50814	Lipocalins	coord: 197..367
IPR022272	Lipocalin family conserved site	PROSITE	PS00213	LIPOCALIN	coord: 209..220

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23470	Csa2G083740	Cucumber (Chinese Long) v2	carcuB0514
Carg23470	MELO3C008677	Melon (DHL92) v3.5.1	carmeB0486
Carg23470	ClCG11G010060	Watermelon (Charleston Gray)	carwcgB0466
Carg23470	CSPI02G07830	Wild cucumber (PI 183967)	carcpiB0521
Carg23470	Cucsa.277630	Cucumber (Gy14) v1	carcgyB0555
Carg23470	CmaCh12G009880	Cucurbita maxima (Rimu)	carcmaB0670
Carg23470	CmoCh12G009970	Cucurbita moschata (Rifu)	carcmoB0652
Carg23470	Lsi11G009230	Bottle gourd (USVL1VR-Ls)	carlsiB436
Carg23470	Cp4.1LG07g08200	Cucurbita pepo (Zucchini)	carcpeB0676
Carg23470	CsGy2G008070	Cucumber (Gy14) v2	carcgybB0490
Carg23470	MELO3C008677.2	Melon (DHL92) v3.6.1	carmedB0492
Carg23470	CsaV3_2G010250	Cucumber (Chinese Long) v3	carcucB0519
Carg23470	Cla97C11G216330	Watermelon (97103) v2	carwmbB0505
Carg23470	Bhi06G000902	Wax gourd	carwgoB0585

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23470	Cucurbita maxima (Rimu)	carcmaB0671
Carg23470	Cucurbita moschata (Rifu)	carcmoB0653
Carg23470	Melon (DHL92) v3.5.1	carmeB0487
Carg23470	Melon (DHL92) v3.6.1	carmedB0493