Carg23386 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCCGGAAAGCCTTGATTGTGAGGGTATTATTTTCTGTATCTGGCGTGTAAGAAATAAGAAGCTACACTAAAGCCTCCATAAGAGGAATCAAATTCGTTGCACCAAGACCCATCGATAATTCTCCACTGCATCAACAAAGGGAAATAAAAGCAAAAAGAGATTGGAATTCAGAGCGAAAATCTTCCATTGTTGAGCTCCGAAAGTGGGAAAAAGAAAGAAAAAAGTTGCTTAAACCCCCATTGTTCTTCAAACCAAACGATTCGAAGAGACAAGGAATCTCCTCTCGCCCCTTTCAATGGTGGGATTTCTCTACTTCTTCACTATAAAGTTTCTTTACCTTTTTCTTCCACTTTCCTCTGCAAATTCATCTCTGTTTCGTCTGTTCTACATTTTTTTTTTGCCTCATTTGAACTTGTTTCGCATCTTGGATCAATTTCACTCCATAAATTTCACTACCCATTTCAGATTTTAGGTTAGAGGTAGTAATGATTCATTTATTGCTCACCTTTTGTGTGTCAGGTTTAGCTGATGAGGTGTTTCCTAATTTAGCTCAAAATCATTTAATCATGTCCGGAAATTTGTTCTGTGATGTTTTTTTAGTTGTTTTTGGACTAGATCTTTGTTGCCCATAAAGCTGTAATGAAGGTTTGTTGTTGATTGAATCTGTTGGCTTATTTTGGTTCTGGTTGTTTTGTTGTGTTGTAGCTTTGAAGCACCCTGGTTTTCTTTTTGGGTTAAGTTTTTAGAAGATTTGATAATGGTTTCGAGGTCTTATTCTAACTTGTTAGAGCTTGCTTCTGGTGGTTGTTCTCCAACTTTTGGCCTTGGCCGAGAGAAAAAGAGGCTTCCTAGAGTGGCCACTGTGGCTGGAGTCTTGTCTGAGCTTGATGATGATAGCCCTGCACCAGTTAAATTGGGCTCGATGCCCCGCCATGCCATCGGTCGCCTGCAAGACCCGAGTATTAACCGACCAATCGCATTATCGTTAGGGAATTCAGTCCCCGACTTCGGCACTATCGAAAATGGAATGGACCGATTGGCGAGCTTTTAG ATGGTCCGGAAAGCCTTGATTGTGAGGGTATTATTTTCTGTATCTGGCGTCTTTGAAGCACCCTGGTTTTCTTTTTGGGTTAAGTTTTTAGAAGATTTGATAATGGTTTCGAGGTCTTATTCTAACTTGTTAGAGCTTGCTTCTGGTGGTTGTTCTCCAACTTTTGGCCTTGGCCGAGAGAAAAAGAGGCTTCCTAGAGTGGCCACTGTGGCTGGAGTCTTGTCTGAGCTTGATGATGATAGCCCTGCACCAGTTAAATTGGGCTCGATGCCCCGCCATGCCATCGGTCGCCTGCAAGACCCGAGTATTAACCGACCAATCGCATTATCGTTAGGGAATTCAGTCCCCGACTTCGGCACTATCGAAAATGGAATGGACCGATTGGCGAGCTTTTAG ATGGTCCGGAAAGCCTTGATTGTGAGGGTATTATTTTCTGTATCTGGCGTCTTTGAAGCACCCTGGTTTTCTTTTTGGGTTAAGTTTTTAGAAGATTTGATAATGGTTTCGAGGTCTTATTCTAACTTGTTAGAGCTTGCTTCTGGTGGTTGTTCTCCAACTTTTGGCCTTGGCCGAGAGAAAAAGAGGCTTCCTAGAGTGGCCACTGTGGCTGGAGTCTTGTCTGAGCTTGATGATGATAGCCCTGCACCAGTTAAATTGGGCTCGATGCCCCGCCATGCCATCGGTCGCCTGCAAGACCCGAGTATTAACCGACCAATCGCATTATCGTTAGGGAATTCAGTCCCCGACTTCGGCACTATCGAAAATGGAATGGACCGATTGGCGAGCTTTTAG MVRKALIVRVLFSVSGVFEAPWFSFWVKFLEDLIMVSRSYSNLLELASGGCSPTFGLGREKKRLPRVATVAGVLSELDDDSPAPVKLGSMPRHAIGRLQDPSINRPIALSLGNSVPDFGTIENGMDRLASF
BLAST of Carg23386 vs. NCBI nr
Match: XP_022939882.1 (alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5-like [Cucurbita moschata]) HSP 1 Score: 97.8 bits (242), Expect = 2.9e-17 Identity = 53/82 (64.63%), Postives = 60/82 (73.17%), Query Frame = 0
BLAST of Carg23386 vs. NCBI nr
Match: XP_022923374.1 (alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 97.8 bits (242), Expect = 2.9e-17 Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0
BLAST of Carg23386 vs. NCBI nr
Match: XP_023005288.1 (alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5-like [Cucurbita maxima]) HSP 1 Score: 97.8 bits (242), Expect = 2.9e-17 Identity = 53/82 (64.63%), Postives = 60/82 (73.17%), Query Frame = 0
BLAST of Carg23386 vs. NCBI nr
Match: XP_023540413.1 (alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 97.8 bits (242), Expect = 2.9e-17 Identity = 53/82 (64.63%), Postives = 60/82 (73.17%), Query Frame = 0
BLAST of Carg23386 vs. NCBI nr
Match: XP_022923375.1 (alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 96.7 bits (239), Expect = 6.4e-17 Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 0
BLAST of Carg23386 vs. TAIR10
Match: AT4G17770.1 (trehalose phosphatase/synthase 5) HSP 1 Score: 64.3 bits (155), Expect = 6.3e-11 Identity = 39/82 (47.56%), Postives = 47/82 (57.32%), Query Frame = 0
BLAST of Carg23386 vs. TAIR10
Match: AT1G68020.2 (UDP-Glycosyltransferase / trehalose-phosphatase family protein) HSP 1 Score: 58.9 bits (141), Expect = 2.7e-09 Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 0
BLAST of Carg23386 vs. TAIR10
Match: AT1G06410.1 (trehalose-phosphatase/synthase 7) HSP 1 Score: 54.3 bits (129), Expect = 6.6e-08 Identity = 27/46 (58.70%), Postives = 35/46 (76.09%), Query Frame = 0
BLAST of Carg23386 vs. Swiss-Prot
Match: sp|O23617|TPS5_ARATH (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 OS=Arabidopsis thaliana OX=3702 GN=TPS5 PE=1 SV=2) HSP 1 Score: 64.3 bits (155), Expect = 1.1e-09 Identity = 39/82 (47.56%), Postives = 47/82 (57.32%), Query Frame = 0
BLAST of Carg23386 vs. Swiss-Prot
Match: sp|Q94AH8|TPS6_ARATH (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 OS=Arabidopsis thaliana OX=3702 GN=TPS6 PE=1 SV=2) HSP 1 Score: 58.9 bits (141), Expect = 4.8e-08 Identity = 30/47 (63.83%), Postives = 38/47 (80.85%), Query Frame = 0
BLAST of Carg23386 vs. Swiss-Prot
Match: sp|Q9LMI0|TPS7_ARATH (Probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 OS=Arabidopsis thaliana OX=3702 GN=TPS7 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.2e-06 Identity = 27/46 (58.70%), Postives = 35/46 (76.09%), Query Frame = 0
BLAST of Carg23386 vs. TrEMBL
Match: tr|A0A1S3BJL7|A0A1S3BJL7_CUCME (LOW QUALITY PROTEIN: alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5-like OS=Cucumis melo OX=3656 GN=LOC103490765 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 9.4e-17 Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0
BLAST of Carg23386 vs. TrEMBL
Match: tr|A0A0A0L6F3|A0A0A0L6F3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G009420 PE=4 SV=1) HSP 1 Score: 95.5 bits (236), Expect = 9.4e-17 Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0
BLAST of Carg23386 vs. TrEMBL
Match: tr|A0A2K3PN74|A0A2K3PN74_TRIPR (Trehalose-6-phosphate synthase domain protein OS=Trifolium pratense OX=57577 GN=L195_g013464 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.8e-12 Identity = 46/82 (56.10%), Postives = 56/82 (68.29%), Query Frame = 0
BLAST of Carg23386 vs. TrEMBL
Match: tr|A0A2K3MN11|A0A2K3MN11_TRIPR (Trehalose-6-phosphate synthase domain protein OS=Trifolium pratense OX=57577 GN=L195_g015288 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 1.8e-12 Identity = 46/82 (56.10%), Postives = 56/82 (68.29%), Query Frame = 0
BLAST of Carg23386 vs. TrEMBL
Match: tr|W9RBF3|W9RBF3_9ROSA (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 5 OS=Morus notabilis OX=981085 GN=L484_017772 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 9.1e-12 Identity = 45/82 (54.88%), Postives = 58/82 (70.73%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |