Carg23378 (gene) Silver-seed gourd

Overview
NameCarg23378
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionAT-hook motif nuclear-localized protein
LocationCucurbita_argyrosperma_scaffold_184 : 47425 .. 48135 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGAATTGGACTTAGGAACTCGATATTTCTCCGCCGCCGACCACGACGACGACGACGACGATCCCCACCAATCCCACGGCGGCGCTGACGATGTCCTTGGCCGCCGCCCTCGCGGCCGACCACCAGGTTCAAAAAATAAGCCGAAGCCGCCGGTTATCATCACCCGCGAGAGCGCCAACACGCTACGTGTCCACATCTTAGAGGTCAACAGCGGCTGTGACATATTTGATTGCATCGCCGCCTACGCGCGTCGGCGACAGCGTGGGATCTGTATTTTGAGCGGTAGTGGCAACGTCAGTAACGTCGGAATCCGCCAACCAGCAGCGGCCGGAGCCGTACTGACTCTTCATGGGAGATTCGAGATTTTGTCGTTATCTGGATCGTTTCTTCCGCCGCCTGCTCCGGCTAGCGCCACTAGTTTGACTATATTTTTGGCCGGAGGGCAGGGACAGGTGGTCGGCGGGACGGTGGCTGGAGAATTAACAGCCGCAGGACCAGTGATTTTGATTGTAGCTTCGTTTAGTAATGTGGCGTATGAGAGATTACCACTGGATGAGGAAGATCAGCAGCAGCAAGTCCCCGTCGCAAGCGGCGGAGTTGGCGGCGGCGGCGGCGGCGACAACCCATTTCAAGACGCATCAAATTCAGGAGTTCCATTTTTGAATTATCCACTTCATATGCAAAATATTCAGCTTCCACCTTTCTGA

mRNA sequence

ATGGCGGAATTGGACTTAGGAACTCGATATTTCTCCGCCGCCGACCACGACGACGACGACGACGATCCCCACCAATCCCACGGCGGCGCTGACGATGTCCTTGGCCGCCGCCCTCGCGGCCGACCACCAGGTTCAAAAAATAAGCCGAAGCCGCCGGTTATCATCACCCGCGAGAGCGCCAACACGCTACGTGTCCACATCTTAGAGGTCAACAGCGGCTGTGACATATTTGATTGCATCGCCGCCTACGCGCGTCGGCGACAGCGTGGGATCTGTATTTTGAGCGGTAGTGGCAACGTCAGTAACGTCGGAATCCGCCAACCAGCAGCGGCCGGAGCCGTACTGACTCTTCATGGGAGATTCGAGATTTTGTCGTTATCTGGATCGTTTCTTCCGCCGCCTGCTCCGGCTAGCGCCACTAGTTTGACTATATTTTTGGCCGGAGGGCAGGGACAGGTGGTCGGCGGGACGGTGGCTGGAGAATTAACAGCCGCAGGACCAGTGATTTTGATTGTAGCTTCGTTTAGTAATGTGGCGTATGAGAGATTACCACTGGATGAGGAAGATCAGCAGCAGCAAGTCCCCGTCGCAAGCGGCGGAGTTGGCGGCGGCGGCGGCGGCGACAACCCATTTCAAGACGCATCAAATTCAGGAGTTCCATTTTTGAATTATCCACTTCATATGCAAAATATTCAGCTTCCACCTTTCTGA

Coding sequence (CDS)

ATGGCGGAATTGGACTTAGGAACTCGATATTTCTCCGCCGCCGACCACGACGACGACGACGACGATCCCCACCAATCCCACGGCGGCGCTGACGATGTCCTTGGCCGCCGCCCTCGCGGCCGACCACCAGGTTCAAAAAATAAGCCGAAGCCGCCGGTTATCATCACCCGCGAGAGCGCCAACACGCTACGTGTCCACATCTTAGAGGTCAACAGCGGCTGTGACATATTTGATTGCATCGCCGCCTACGCGCGTCGGCGACAGCGTGGGATCTGTATTTTGAGCGGTAGTGGCAACGTCAGTAACGTCGGAATCCGCCAACCAGCAGCGGCCGGAGCCGTACTGACTCTTCATGGGAGATTCGAGATTTTGTCGTTATCTGGATCGTTTCTTCCGCCGCCTGCTCCGGCTAGCGCCACTAGTTTGACTATATTTTTGGCCGGAGGGCAGGGACAGGTGGTCGGCGGGACGGTGGCTGGAGAATTAACAGCCGCAGGACCAGTGATTTTGATTGTAGCTTCGTTTAGTAATGTGGCGTATGAGAGATTACCACTGGATGAGGAAGATCAGCAGCAGCAAGTCCCCGTCGCAAGCGGCGGAGTTGGCGGCGGCGGCGGCGGCGACAACCCATTTCAAGACGCATCAAATTCAGGAGTTCCATTTTTGAATTATCCACTTCATATGCAAAATATTCAGCTTCCACCTTTCTGA

Protein sequence

MAELDLGTRYFSAADHDDDDDDPHQSHGGADDVLGRRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIVASFSNVAYERLPLDEEDQQQQVPVASGGVGGGGGGDNPFQDASNSGVPFLNYPLHMQNIQLPPF
Homology
[Close]
BLAST of Carg23378 vs. NCBI nr
Match: XP_022944488.1 (AT-hook motif nuclear-localized protein 23-like [Cucurbita moschata])

HSP 1 Score: 357.5 bits (916), Expect = 3.6e-95
Identity = 227/236 (96.19%), Postives = 228/236 (96.61%), Query Frame = 0 

Query: 1   MAELDLGTRYFSAXXXXXXXXXXXXXXXXXXXVLGRRPRGRPPGSKNKPKPPVIITRESA 60
           MAELDLGTRYFSA XXXXXXXXXXXXXXXX  VLGRRPRGRPPGSKNKPKPPVIITRESA
Sbjct: 1   MAELDLGTRYFSA-XXXXXXXXXXXXXXXXDDVLGRRPRGRPPGSKNKPKPPVIITRESA 60

Query: 61  NTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGR 120
           NTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSG+GNVSNVGIRQPAA GAVLTLHGR
Sbjct: 61  NTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGTGNVSNVGIRQPAAPGAVLTLHGR 120

Query: 121 FEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIVASFSNVAY 180
           FEILSLSGSFLPPPAP SATSLTIFLAGGQGQVVGGTVAGELTAAGPVILI ASFSNVAY
Sbjct: 121 FEILSLSGSFLPPPAPTSATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIAASFSNVAY 180

Query: 181 ERLPLDXXXXXXXXXXXXXXXXXXXXXXNPFQDASNSGVPFLNYPLHMQNIQLPPF 237
           ERLPLD  XXXXXXXXXXXXXXXXXXXXNPFQDASNSGVPFLNYPLHMQNIQLPPF
Sbjct: 181 ERLPLD--XXXXXXXXXXXXXXXXXXXXNPFQDASNSGVPFLNYPLHMQNIQLPPF 233

[Close]
BLAST of Carg23378 vs. NCBI nr
Match: XP_023539505.1 (AT-hook motif nuclear-localized protein 23-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 356.3 bits (913), Expect = 8.0e-95
Identity = 221/236 (93.64%), Postives = 223/236 (94.49%), Query Frame = 0 

Query: 1   MAELDLGTRYFSAXXXXXXXXXXXXXXXXXXXVLGRRPRGRPPGSKNKPKPPVIITRESA 60
           MAELDLGTRYFSA  XXXXXXXXXXX      VLGRRPRGRP GSKNKPKPPVIITRESA
Sbjct: 1   MAELDLGTRYFSA-AXXXXXXXXXXXHGGADDVLGRRPRGRPAGSKNKPKPPVIITRESA 60

Query: 61  NTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGR 120
           NTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGR
Sbjct: 61  NTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGR 120

Query: 121 FEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIVASFSNVAY 180
           FEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGTVAGELTAAGPVILI ASFSNVAY
Sbjct: 121 FEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIAASFSNVAY 180

Query: 181 ERLPLDXXXXXXXXXXXXXXXXXXXXXXNPFQDASNSGVPFLNYPLHMQNIQLPPF 237
           ERLP++   XXXXXXXXXXXXXXXXXXXNPFQDASNSGVPFLNYPLHMQNIQLPPF
Sbjct: 181 ERLPVE---XXXXXXXXXXXXXXXXXXXNPFQDASNSGVPFLNYPLHMQNIQLPPF 232

[Close]
BLAST of Carg23378 vs. NCBI nr
Match: XP_023005523.1 (AT-hook motif nuclear-localized protein 23-like [Cucurbita maxima])

HSP 1 Score: 349.7 bits (896), Expect = 7.5e-93
Identity = 221/237 (93.25%), Postives = 225/237 (94.94%), Query Frame = 0 

Query: 1   MAELDLGTRYFSAXXXXXXXXXXXXXXXXXXXVLGRRPRGRPPGSKNKPKPPVIITRESA 60
           MAELDLG+RYFSA  XXXXXXXXXXXXXXXXX LGRR RGRPPGSKNKPKPPVIITRESA
Sbjct: 1   MAELDLGSRYFSA-AXXXXXXXXXXXXXXXXXXLGRRSRGRPPGSKNKPKPPVIITRESA 60

Query: 61  NTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGR 120
           NTLRVHILEV+SGCDIFDC+AAYARRRQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGR
Sbjct: 61  NTLRVHILEVSSGCDIFDCVAAYARRRQRGICILSGSGNVSNVGIRQPAAAGAVLTLHGR 120

Query: 121 FEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIVASFSNVAY 180
           FEILSLSGSFLPPPAPA+ATSLTIFLAGGQGQVVGGTVAGELTAAGPVILI ASFSNVAY
Sbjct: 121 FEILSLSGSFLPPPAPANATSLTIFLAGGQGQVVGGTVAGELTAAGPVILIAASFSNVAY 180

Query: 181 ERLPLD-XXXXXXXXXXXXXXXXXXXXXXNPFQDASNSGVPFLNYPLHMQNIQLPPF 237
           ERLPLD    XXXXXXXXXXXXXXXXX  NPFQD SNSGVPFLNYPLHMQNIQLPPF
Sbjct: 181 ERLPLDEEDQXXXXXXXXXXXXXXXXXSDNPFQDPSNSGVPFLNYPLHMQNIQLPPF 236

[Close]
BLAST of Carg23378 vs. NCBI nr
Match: XP_022965150.1 (AT-hook motif nuclear-localized protein 23-like [Cucurbita maxima])

HSP 1 Score: 322.8 bits (826), Expect = 9.8e-85
Identity = 189/207 (91.30%), Postives = 196/207 (94.69%), Query Frame = 0 

Query: 33  VLGRRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRRQRGIC 92
           V+GRRPRGRPPGSKNKPKPPVIITRESANTLRVHILEV SGCDIFDCIAAYARRRQRGIC
Sbjct: 49  VVGRRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVGSGCDIFDCIAAYARRRQRGIC 108

Query: 93  ILSGSGNVSNVGIRQPAAAGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFLAGGQGQ 152
           ILSGSGNV+NVG+RQPA+AGAVLTL GRFEILSLSGSFLPPPAP  ATSLTIFLAGGQGQ
Sbjct: 109 ILSGSGNVTNVGLRQPASAGAVLTLQGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQ 168

Query: 153 VVGGTVAGELTAAGPVILIVASFSNVAYERLPLD---XXXXXXXXXXXXXXXXXXXXXXN 212
           VVGGTVAGELTAAGPVILI ASF+NVAYERLPLD   XXXXXXXXXXXXXXXXXXXXXX 
Sbjct: 169 VVGGTVAGELTAAGPVILIAASFTNVAYERLPLDXXXXXXXXXXXXXXXXXXXXXXXXXX 228

Query: 213 PFQDASNSGVPFLNYPLHMQNIQLPPF 237
           PFQD SNSG+PFLN PLHMQN+QLPPF
Sbjct: 229 PFQDPSNSGLPFLNLPLHMQNVQLPPF 255

[Close]
BLAST of Carg23378 vs. NCBI nr
Match: XP_022145396.1 (AT-hook motif nuclear-localized protein 23-like [Momordica charantia])

HSP 1 Score: 322.0 bits (824), Expect = 1.7e-84
Identity = 188/212 (88.68%), Postives = 196/212 (92.45%), Query Frame = 0 

Query: 33  VLGRRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRRQRGIC 92
           ++GRRPRGRPPGSKNKPKPPVIITRESANTLRVHILEV SGCDIFDC+AAYARRRQRGIC
Sbjct: 51  IVGRRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVGSGCDIFDCVAAYARRRQRGIC 110

Query: 93  ILSGSGNVSNVGIRQPAAAGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFLAGGQGQ 152
           ILSGSGNV+NV +RQPAAAGAVLTLHGRFEILSLSGSFLPPPAP  ATSLTIFLAGGQGQ
Sbjct: 111 ILSGSGNVTNVSLRQPAAAGAVLTLHGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQ 170

Query: 153 VVGGTVAGELTAAGPVILIVASFSNVAYERLPLD--------XXXXXXXXXXXXXXXXXX 212
           VVGGTVAGELTAAGPVILI ASF+NVAYERLPLD        XXXXXXXXXXXXXXXXXX
Sbjct: 171 VVGGTVAGELTAAGPVILIAASFTNVAYERLPLDXXXXXXXXXXXXXXXXXXXXXXXXXX 230

Query: 213 XXXXNPFQDASNSGVPFLNYPLHMQNIQLPPF 237
           XXXX PFQD SNSG+PFLN PLHMQN+QLPPF
Sbjct: 231 XXXXXPFQDPSNSGLPFLNLPLHMQNVQLPPF 262

[Close]
BLAST of Carg23378 vs. TAIR10
Match: AT4G17800.1 (Predicted AT-hook DNA-binding family protein)

HSP 1 Score: 248.1 bits (632), Expect = 5.6e-66
Identity = 149/191 (78.01%), Postives = 164/191 (85.86%), Query Frame = 0 

Query: 45  SKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGSGNVSNVG 104
           SKNKPKPPVIITRESANTLR HILEV +GCD+FDC+A YARRRQRGIC+LSGSG V+NV 
Sbjct: 91  SKNKPKPPVIITRESANTLRAHILEVTNGCDVFDCVATYARRRQRGICVLSGSGTVTNVS 150

Query: 105 IRQPAAAGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGTVAGELTA 164
           IRQP+AAGAV+TL G FEILSLSGSFLPPPAP  ATSLTIFLAGGQGQVVGG+V GELTA
Sbjct: 151 IRQPSAAGAVVTLQGTFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGSVVGELTA 210

Query: 165 AGPVILIVASFSNVAYERLPLDXXXXXXXXXXXXXXXXXXXXXXNPFQDASNSGVPFLNY 224
           AGPVI+I ASF+NVAYERLPL+   XXXXXXXXXXXXXXXXXXX          +PF N 
Sbjct: 211 AGPVIVIAASFTNVAYERLPLE---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPFFNL 270

Query: 225 PLHMQ-NIQLP 235
           P++MQ N+QLP
Sbjct: 271 PMNMQPNVQLP 278

[Close]
BLAST of Carg23378 vs. TAIR10
Match: AT2G35270.1 (Predicted AT-hook DNA-binding family protein)

HSP 1 Score: 247.3 bits (630), Expect = 9.5e-66
Identity = 121/149 (81.21%), Postives = 133/149 (89.26%), Query Frame = 0 

Query: 38  PRGRPPGSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGS 97
           PRGRP GSKNKPKPPVI+TRESANTLR HILEV SGCD+F+CI+ YARRRQRGIC+LSG+
Sbjct: 80  PRGRPAGSKNKPKPPVIVTRESANTLRAHILEVGSGCDVFECISTYARRRQRGICVLSGT 139

Query: 98  GNVSNVGIRQPAAAGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGT 157
           G V+NV IRQP AAGAV+TL G FEILSLSGSFLPPPAP  ATSLTIFLAG QGQVVGG 
Sbjct: 140 GTVTNVSIRQPTAAGAVVTLRGTFEILSLSGSFLPPPAPPGATSLTIFLAGAQGQVVGGN 199

Query: 158 VAGELTAAGPVILIVASFSNVAYERLPLD 187
           V GEL AAGPV+++ ASF+NVAYERLPLD
Sbjct: 200 VVGELMAAGPVMVMAASFTNVAYERLPLD 228

[Close]
BLAST of Carg23378 vs. TAIR10
Match: AT4G22810.1 (Predicted AT-hook DNA-binding family protein)

HSP 1 Score: 224.9 bits (572), Expect = 5.1e-59
Identity = 105/154 (68.18%), Postives = 132/154 (85.71%), Query Frame = 0 

Query: 36  RRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRRQRGICILS 95
           RRPRGRP GSKNKPKPP+IITR+SAN LR H++E+  GCD+ + +A +ARRRQRG+C++S
Sbjct: 105 RRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEIGDGCDLVESVATFARRRQRGVCVMS 164

Query: 96  GSGNVSNVGIRQPA---AAGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFLAGGQGQ 155
           G+GNV+NV IRQP    + G+V++LHGRFEILSLSGSFLPPPAP +AT L+++LAGGQGQ
Sbjct: 165 GTGNVTNVTIRQPGSHPSPGSVVSLHGRFEILSLSGSFLPPPAPPTATGLSVYLAGGQGQ 224

Query: 156 VVGGTVAGELTAAGPVILIVASFSNVAYERLPLD 187
           VVGG+V G L  AGPV+++ ASFSN AYERLPL+
Sbjct: 225 VVGGSVVGPLLCAGPVVVMAASFSNAAYERLPLE 258

[Close]
BLAST of Carg23378 vs. TAIR10
Match: AT4G12050.1 (Predicted AT-hook DNA-binding family protein)

HSP 1 Score: 224.9 bits (572), Expect = 5.1e-59
Identity = 105/152 (69.08%), Postives = 132/152 (86.84%), Query Frame = 0 

Query: 36  RRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRRQRGICILS 95
           RRPRGRP GSKNKPK P+IITR+SAN LR H++E+  GCDI DC+A +ARRRQRG+C++S
Sbjct: 118 RRPRGRPAGSKNKPKAPIIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQRGVCVMS 177

Query: 96  GSGNVSNVGIRQPAA-AGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFLAGGQGQVV 155
           G+G+V+NV IRQP +  G+V++LHGRFEILSLSGSFLPPPAP +AT L+++LAGGQGQVV
Sbjct: 178 GTGSVTNVTIRQPGSPPGSVVSLHGRFEILSLSGSFLPPPAPPAATGLSVYLAGGQGQVV 237

Query: 156 GGTVAGELTAAGPVILIVASFSNVAYERLPLD 187
           GG+V G L  +GPV+++ ASFSN AYERLPL+
Sbjct: 238 GGSVVGPLLCSGPVVVMAASFSNAAYERLPLE 269

[Close]
BLAST of Carg23378 vs. TAIR10
Match: AT2G45430.1 (AT-hook motif nuclear-localized protein 22)

HSP 1 Score: 215.3 bits (547), Expect = 4.0e-56
Identity = 103/153 (67.32%), Postives = 128/153 (83.66%), Query Frame = 0 

Query: 38  PRGRPPGSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGS 97
           PRGRP GSKNKPKPP+IITR+SAN L+ H++EV +GCD+ + +  +ARRRQRGIC+LSG+
Sbjct: 91  PRGRPAGSKNKPKPPIIITRDSANALKSHVMEVANGCDVMESVTVFARRRQRGICVLSGN 150

Query: 98  GNVSNVGIRQPAA----AGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFLAGGQGQV 157
           G V+NV IRQPA+      +V+ LHGRFEILSLSGSFLPPPAP +A+ LTI+LAGGQGQV
Sbjct: 151 GAVTNVTIRQPASVPGGGSSVVNLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQV 210

Query: 158 VGGTVAGELTAAGPVILIVASFSNVAYERLPLD 187
           VGG+V G L A+GPV+++ ASF N AYERLPL+
Sbjct: 211 VGGSVVGPLMASGPVVIMAASFGNAAYERLPLE 243

[Close]
BLAST of Carg23378 vs. Swiss-Prot
Match: sp|O23620|AHL23_ARATH (AT-hook motif nuclear-localized protein 23 OS=Arabidopsis thaliana OX=3702 GN=AHL23 PE=1 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.0e-64
Identity = 149/191 (78.01%), Postives = 164/191 (85.86%), Query Frame = 0 

Query: 45  SKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGSGNVSNVG 104
           SKNKPKPPVIITRESANTLR HILEV +GCD+FDC+A YARRRQRGIC+LSGSG V+NV 
Sbjct: 91  SKNKPKPPVIITRESANTLRAHILEVTNGCDVFDCVATYARRRQRGICVLSGSGTVTNVS 150

Query: 105 IRQPAAAGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGTVAGELTA 164
           IRQP+AAGAV+TL G FEILSLSGSFLPPPAP  ATSLTIFLAGGQGQVVGG+V GELTA
Sbjct: 151 IRQPSAAGAVVTLQGTFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGSVVGELTA 210

Query: 165 AGPVILIVASFSNVAYERLPLDXXXXXXXXXXXXXXXXXXXXXXNPFQDASNSGVPFLNY 224
           AGPVI+I ASF+NVAYERLPL+   XXXXXXXXXXXXXXXXXXX          +PF N 
Sbjct: 211 AGPVIVIAASFTNVAYERLPLE---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPFFNL 270

Query: 225 PLHMQ-NIQLP 235
           P++MQ N+QLP
Sbjct: 271 PMNMQPNVQLP 278

[Close]
BLAST of Carg23378 vs. Swiss-Prot
Match: sp|O82166|AHL21_ARATH (AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AHL21 PE=2 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.7e-64
Identity = 121/149 (81.21%), Postives = 133/149 (89.26%), Query Frame = 0 

Query: 38  PRGRPPGSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGS 97
           PRGRP GSKNKPKPPVI+TRESANTLR HILEV SGCD+F+CI+ YARRRQRGIC+LSG+
Sbjct: 80  PRGRPAGSKNKPKPPVIVTRESANTLRAHILEVGSGCDVFECISTYARRRQRGICVLSGT 139

Query: 98  GNVSNVGIRQPAAAGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGT 157
           G V+NV IRQP AAGAV+TL G FEILSLSGSFLPPPAP  ATSLTIFLAG QGQVVGG 
Sbjct: 140 GTVTNVSIRQPTAAGAVVTLRGTFEILSLSGSFLPPPAPPGATSLTIFLAGAQGQVVGGN 199

Query: 158 VAGELTAAGPVILIVASFSNVAYERLPLD 187
           V GEL AAGPV+++ ASF+NVAYERLPLD
Sbjct: 200 VVGELMAAGPVMVMAASFTNVAYERLPLD 228

[Close]
BLAST of Carg23378 vs. Swiss-Prot
Match: sp|O49662|AHL24_ARATH (AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AHL24 PE=2 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 9.1e-58
Identity = 105/154 (68.18%), Postives = 132/154 (85.71%), Query Frame = 0 

Query: 36  RRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRRQRGICILS 95
           RRPRGRP GSKNKPKPP+IITR+SAN LR H++E+  GCD+ + +A +ARRRQRG+C++S
Sbjct: 105 RRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEIGDGCDLVESVATFARRRQRGVCVMS 164

Query: 96  GSGNVSNVGIRQPA---AAGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFLAGGQGQ 155
           G+GNV+NV IRQP    + G+V++LHGRFEILSLSGSFLPPPAP +AT L+++LAGGQGQ
Sbjct: 165 GTGNVTNVTIRQPGSHPSPGSVVSLHGRFEILSLSGSFLPPPAPPTATGLSVYLAGGQGQ 224

Query: 156 VVGGTVAGELTAAGPVILIVASFSNVAYERLPLD 187
           VVGG+V G L  AGPV+++ ASFSN AYERLPL+
Sbjct: 225 VVGGSVVGPLLCAGPVVVMAASFSNAAYERLPLE 258

[Close]
BLAST of Carg23378 vs. Swiss-Prot
Match: sp|Q9SZ70|AHL26_ARATH (AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AHL26 PE=2 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 9.1e-58
Identity = 105/152 (69.08%), Postives = 132/152 (86.84%), Query Frame = 0 

Query: 36  RRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRRQRGICILS 95
           RRPRGRP GSKNKPK P+IITR+SAN LR H++E+  GCDI DC+A +ARRRQRG+C++S
Sbjct: 118 RRPRGRPAGSKNKPKAPIIITRDSANALRTHVMEIGDGCDIVDCMATFARRRQRGVCVMS 177

Query: 96  GSGNVSNVGIRQPAA-AGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFLAGGQGQVV 155
           G+G+V+NV IRQP +  G+V++LHGRFEILSLSGSFLPPPAP +AT L+++LAGGQGQVV
Sbjct: 178 GTGSVTNVTIRQPGSPPGSVVSLHGRFEILSLSGSFLPPPAPPAATGLSVYLAGGQGQVV 237

Query: 156 GGTVAGELTAAGPVILIVASFSNVAYERLPLD 187
           GG+V G L  +GPV+++ ASFSN AYERLPL+
Sbjct: 238 GGSVVGPLLCSGPVVVMAASFSNAAYERLPLE 269

[Close]
BLAST of Carg23378 vs. Swiss-Prot
Match: sp|O22130|AHL22_ARATH (AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AHL22 PE=1 SV=1)

HSP 1 Score: 215.3 bits (547), Expect = 7.2e-55
Identity = 103/153 (67.32%), Postives = 128/153 (83.66%), Query Frame = 0 

Query: 38  PRGRPPGSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGS 97
           PRGRP GSKNKPKPP+IITR+SAN L+ H++EV +GCD+ + +  +ARRRQRGIC+LSG+
Sbjct: 91  PRGRPAGSKNKPKPPIIITRDSANALKSHVMEVANGCDVMESVTVFARRRQRGICVLSGN 150

Query: 98  GNVSNVGIRQPAA----AGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFLAGGQGQV 157
           G V+NV IRQPA+      +V+ LHGRFEILSLSGSFLPPPAP +A+ LTI+LAGGQGQV
Sbjct: 151 GAVTNVTIRQPASVPGGGSSVVNLHGRFEILSLSGSFLPPPAPPAASGLTIYLAGGQGQV 210

Query: 158 VGGTVAGELTAAGPVILIVASFSNVAYERLPLD 187
           VGG+V G L A+GPV+++ ASF N AYERLPL+
Sbjct: 211 VGGSVVGPLMASGPVVIMAASFGNAAYERLPLE 243

[Close]
BLAST of Carg23378 vs. TrEMBL
Match: tr|A0A0A0L6J8|A0A0A0L6J8_CUCSA (AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011730 PE=4 SV=1)

HSP 1 Score: 319.3 bits (817), Expect = 7.2e-84
Identity = 195/249 (78.31%), Postives = 206/249 (82.73%), Query Frame = 0 

Query: 1   MAELDLGTRYFS-----------AXXXXXXXXXXXXXXXXXXXVLGRRPRGRPPGSKNKP 60
           MA LDLGTRY +           +                   V+GRRPRGRPPGSKNKP
Sbjct: 1   MAGLDLGTRYLTHLQPQVDGGHFSSGDHQDDDDPHQTLGGTGDVVGRRPRGRPPGSKNKP 60

Query: 61  KPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGSGNVSNVGIRQPA 120
           KPPVIITRESANTLRVHILEV SGCD+FDC+A+YARRRQRGICILSGSGNV+NVG+RQPA
Sbjct: 61  KPPVIITRESANTLRVHILEVGSGCDVFDCVASYARRRQRGICILSGSGNVTNVGLRQPA 120

Query: 121 AAGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGTVAGELTAAGPVI 180
           AAG VLTL GRFEILSLSGSFLPPPAP  ATSLTIFLAGGQGQVVGGTVAGELTAAGPVI
Sbjct: 121 AAG-VLTLQGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGTVAGELTAAGPVI 180

Query: 181 LIVASFSNVAYERLPLD--XXXXXXXXXXXXXXXXXXXXXXNPFQDASNSGVPFLNYPLH 237
           LI ASF+NVAYERLPLD  XXXXXXXXXXXXXXXXXXXXXX PFQD SNSG+PFLN PLH
Sbjct: 181 LIAASFTNVAYERLPLDXXXXXXXXXXXXXXXXXXXXXXXXXPFQDPSNSGLPFLNLPLH 240

[Close]
BLAST of Carg23378 vs. TrEMBL
Match: tr|A0A1S3BJP6|A0A1S3BJP6_CUCME (AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103490791 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 4.7e-83
Identity = 193/249 (77.51%), Postives = 206/249 (82.73%), Query Frame = 0 

Query: 1   MAELDLGTRYFS-----------AXXXXXXXXXXXXXXXXXXXVLGRRPRGRPPGSKNKP 60
           MA LDLG+RY +           +                   V+GRRPRGRPPGSKNKP
Sbjct: 1   MAGLDLGSRYLTHLQPQVDGGHFSSGDHQDDDDPHQTLGGTGDVVGRRPRGRPPGSKNKP 60

Query: 61  KPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRRQRGICILSGSGNVSNVGIRQPA 120
           KPPVIITRESANTLRVHILEV SGCD+FDC+A+YARRRQRGICILSGSGNV+NVG+RQPA
Sbjct: 61  KPPVIITRESANTLRVHILEVGSGCDVFDCVASYARRRQRGICILSGSGNVTNVGLRQPA 120

Query: 121 AAGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFLAGGQGQVVGGTVAGELTAAGPVI 180
           AAG VLTL GRFEILSLSGSFLPPPAP  ATSLTIFLAGGQGQVVGGTVAGELTAAGPVI
Sbjct: 121 AAG-VLTLQGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQVVGGTVAGELTAAGPVI 180

Query: 181 LIVASFSNVAYERLPLD--XXXXXXXXXXXXXXXXXXXXXXNPFQDASNSGVPFLNYPLH 237
           LI ASF+NVAYERLPLD  XXXXXXXXXXXXXXXXXXXXXX PFQD +NSG+PFLN PLH
Sbjct: 181 LIAASFTNVAYERLPLDXXXXXXXXXXXXXXXXXXXXXXXXXPFQDPTNSGLPFLNLPLH 240

[Close]
BLAST of Carg23378 vs. TrEMBL
Match: tr|A0A2P5B995|A0A2P5B995_PARAD (PPC domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_259700 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 4.2e-76
Identity = 172/207 (83.09%), Postives = 187/207 (90.34%), Query Frame = 0 

Query: 33  VLGRRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRRQRGIC 92
           ++GRRPRGRPPGSKNKPKPPVIITRESANTLR HILEV++GCD+FDC+A YARRRQRGIC
Sbjct: 68  LVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVSNGCDVFDCVATYARRRQRGIC 127

Query: 93  ILSGSGNVSNVGIRQPAAAGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFLAGGQGQ 152
           ILSGSG V+NV +RQPAA+GAV+TLHGRFEILSLSGSFLPPPAP  ATSLTIFLAGGQGQ
Sbjct: 128 ILSGSGTVTNVSLRQPAASGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQ 187

Query: 153 VVGGTVAGELTAAGPVILIVASFSNVAYERLPLD-----XXXXXXXXXXXXXXXXXXXXX 212
           VVGG V GELTAAGPVI+I ASF+NVAYERLPLD     XXXXXXXXXXXXXXXXXXXXX
Sbjct: 188 VVGGNVVGELTAAGPVIVIAASFTNVAYERLPLDEXXXXXXXXXXXXXXXXXXXXXXXXX 247

Query: 213 XNPFQDASNSGVPFLNYPLHMQNIQLP 235
            NPF D S SG+PF N PL+MQN+QLP
Sbjct: 248 NNPFPDPS-SGLPFFNLPLNMQNVQLP 273

[Close]
BLAST of Carg23378 vs. TrEMBL
Match: tr|A0A2P5CWT5|A0A2P5CWT5_9ROSA (PPC domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_270540 PE=4 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 9.4e-76
Identity = 173/213 (81.22%), Postives = 187/213 (87.79%), Query Frame = 0 

Query: 33  VLGRRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRRQRGIC 92
           ++GRRPRGRPPGSKNKPKPPVIITRESANTLR HILEV++GCD+FDC+A YARRRQRGIC
Sbjct: 68  LVGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVSNGCDVFDCVATYARRRQRGIC 127

Query: 93  ILSGSGNVSNVGIRQPAAAGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFLAGGQGQ 152
           ILSGSG V+NV +RQPAAAGAV+TLHGRFEILSLSGSFLPPPAP  ATSLTIFLAGGQGQ
Sbjct: 128 ILSGSGTVTNVSLRQPAAAGAVVTLHGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQ 187

Query: 153 VVGGTVAGELTAAGPVILIVASFSNVAYERLPLD-----------XXXXXXXXXXXXXXX 212
           VVGG V GELTAAGPVI+I ASF+NVAYERLPLD           XXXXXXXXXXXXXXX
Sbjct: 188 VVGGNVVGELTAAGPVIVIAASFTNVAYERLPLDEXXXXXXXXXXXXXXXXXXXXXXXXX 247

Query: 213 XXXXXXXNPFQDASNSGVPFLNYPLHMQNIQLP 235
           XXXXXX NPF D S SG+PF N PL+MQN+QLP
Sbjct: 248 XXXXXXNNPFPDPS-SGLPFFNLPLNMQNVQLP 279

[Close]
BLAST of Carg23378 vs. TrEMBL
Match: tr|A5C6L7|A5C6L7_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_032602 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 4.7e-75
Identity = 170/203 (83.74%), Postives = 184/203 (90.64%), Query Frame = 0 

Query: 33  VLGRRPRGRPPGSKNKPKPPVIITRESANTLRVHILEVNSGCDIFDCIAAYARRRQRGIC 92
           ++ RRPRGRPPGSKNKPKPPVIITRESANTLR HILEV +GCD+FDC+A YARRRQRGIC
Sbjct: 67  LVARRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVGNGCDVFDCVATYARRRQRGIC 126

Query: 93  ILSGSGNVSNVGIRQPAAAGAVLTLHGRFEILSLSGSFLPPPAPASATSLTIFLAGGQGQ 152
           +LSGSG V+NV IRQPAAAGA+LTLHGRFEILSLSGSFLPPPAP  ATSLTIFLAGGQGQ
Sbjct: 127 VLSGSGTVTNVSIRQPAAAGAILTLHGRFEILSLSGSFLPPPAPPGATSLTIFLAGGQGQ 186

Query: 153 VVGGTVAGELTAAGPVILIVASFSNVAYERLPLD-XXXXXXXXXXXXXXXXXXXXXXNPF 212
           VVGG+V GELTAAGPVI+I ASF+NVAYERLPLD XXXXXXXXXXXXXXXXXXXXX NPF
Sbjct: 187 VVGGSVVGELTAAGPVIVIAASFTNVAYERLPLDEXXXXXXXXXXXXXXXXXXXXXNNPF 246

Query: 213 QDASNSGVPFLNYPLHMQNIQLP 235
            D S +G+PF N PL+M N QLP
Sbjct: 247 PDPS-AGLPFFNLPLNMPNCQLP 268

The following BLAST results are available for this feature:
BLAST of Carg23378 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022944488.13.6e-9596.19AT-hook motif nuclear-localized protein 23-like [Cucurbita moschata][more]
XP_023539505.18.0e-9593.64AT-hook motif nuclear-localized protein 23-like [Cucurbita pepo subsp. pepo][more]
XP_023005523.17.5e-9393.25AT-hook motif nuclear-localized protein 23-like [Cucurbita maxima][more]
XP_022965150.19.8e-8591.30AT-hook motif nuclear-localized protein 23-like [Cucurbita maxima][more]
XP_022145396.11.7e-8488.68AT-hook motif nuclear-localized protein 23-like [Momordica charantia][more]
BLAST of Carg23378 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G17800.15.6e-6678.01Predicted AT-hook DNA-binding family protein[more]
AT2G35270.19.5e-6681.21Predicted AT-hook DNA-binding family protein[more]
AT4G22810.15.1e-5968.18Predicted AT-hook DNA-binding family protein[more]
AT4G12050.15.1e-5969.08Predicted AT-hook DNA-binding family protein[more]
AT2G45430.14.0e-5667.32AT-hook motif nuclear-localized protein 22[more]
BLAST of Carg23378 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O23620|AHL23_ARATH1.0e-6478.01AT-hook motif nuclear-localized protein 23 OS=Arabidopsis thaliana OX=3702 GN=AH... [more]
sp|O82166|AHL21_ARATH1.7e-6481.21AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana OX=3702 GN=AH... [more]
sp|O49662|AHL24_ARATH9.1e-5868.18AT-hook motif nuclear-localized protein 24 OS=Arabidopsis thaliana OX=3702 GN=AH... [more]
sp|Q9SZ70|AHL26_ARATH9.1e-5869.08AT-hook motif nuclear-localized protein 26 OS=Arabidopsis thaliana OX=3702 GN=AH... [more]
sp|O22130|AHL22_ARATH7.2e-5567.32AT-hook motif nuclear-localized protein 22 OS=Arabidopsis thaliana OX=3702 GN=AH... [more]
BLAST of Carg23378 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L6J8|A0A0A0L6J8_CUCSA7.2e-8478.31AT-hook motif nuclear-localized protein OS=Cucumis sativus OX=3659 GN=Csa_3G0117... [more]
tr|A0A1S3BJP6|A0A1S3BJP6_CUCME4.7e-8377.51AT-hook motif nuclear-localized protein OS=Cucumis melo OX=3656 GN=LOC103490791 ... [more]
tr|A0A2P5B995|A0A2P5B995_PARAD4.2e-7683.09PPC domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_259... [more]
tr|A0A2P5CWT5|A0A2P5CWT5_9ROSA9.4e-7681.22PPC domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_270540 ... [more]
tr|A5C6L7|A5C6L7_VITVI4.7e-7583.74Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_032602 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR014476AT-hook_nuclear
IPR005175PPC_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg23378-RACarg23378-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 236..236
NoneNo IPR availableGENE3DG3DSA:3.30.1330.80coord: 63..194
e-value: 1.3E-9
score: 40.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 188..214
NoneNo IPR availablePANTHERPTHR31100FAMILY NOT NAMEDcoord: 17..231
NoneNo IPR availablePANTHERPTHR31100:SF21SUBFAMILY NOT NAMEDcoord: 17..231
NoneNo IPR availableSUPERFAMILYSSF117856AF0104/ALDC/Ptd012-likecoord: 60..192
IPR005175PPC domainPFAMPF03479DUF296coord: 64..176
e-value: 1.8E-28
score: 98.8
IPR005175PPC domainPROSITEPS51742PPCcoord: 60..197
score: 39.196
IPR005175PPC domainCDDcd11378DUF296coord: 64..175
e-value: 1.02339E-21
score: 86.1002
IPR014476AT-hook motif nuclear-localized proteinPIRSFPIRSF016021ESCAROLAcoord: 7..230
e-value: 2.8E-97
score: 323.4