Carg23299 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23299
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Abc transporter g family member 25
Location	Cucurbita_argyrosperma_scaffold_188 : 99550 .. 105039 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGCAAACCCTAATTACTTCTTACAACACTCTTTTGGCTCCAAGAGTAAAGGCAGCTACGTTGCTTGAAACGAAAACTCGTGAACGATTGACTTGCAAAACTAGTCTCTTCATGTGGTGTAACCAATTGAGTATCTTACTTCAGAGAAATCTCAAAGAACGAAAACACGAGACCTTCAATGGCTTGAGATTTTTTCAAGTTATCACTGCGGCGATGCTCGCGGGATTGATGTGGTGGCACTCGGATTTTCGAGATATTCAAGATCGTCTCGGCCTTCTTTTCTTCATTTCAATTTTCTGGGGAGTTTTCCCTTCCTTTAACGCGGTTTTTGCATTCCCTCAAGAGCGAGCAATCTTTCTTAAGGAACGAGCTTCGGGTTTGTACACGCTATCGTCATATTTCATGGCTAGAGTCATTGGAGACCTTCCTATGGAGCTCATCCTTCCAACAATTTTCCTCACCATTGCATATTGGATGACCGAGCTAAAACCAGAGCTCGGTGCCTTTCTCTTGACGTTGTCGGTCCTCCTTGGCTACGTTCTCGTATCGCAAGGGCTTGGCCTTGCGTTAGGTGCAACAATCATGGATGCTAAACAAGCTTCCACCGTAGTAACCGTGACGATGTTGGCATTTGTCTTGACGGGAGGTTTTTATGTACACAAAGTACCAACGTGCATGACTTGGATCAAATACATTTCAGCGACATATTACAGTTATAGGCTCTTCATCAACGTGCAATATGGCACCGGAGACAAGATATGGTCGTTGCTCGGTTGCTCACGACATGGAACCGACAAAGCAAGGTGTAACTTTGTGGAAGAAGATGTGGTAGGGCAAATAAGCCCTGCATTGAGCATTGGAGCTTTGTTATTTATGTTTGTGGGGTATAGGTTATTGGCATATTTGGCTTTGAGACGCATCAAATAGATAGCCTAAATGAAGGAGAAGCTTGCATTGCATGCATGTTTGACACACTTCGAATGGATTTCCACTAACCATTTGGTTCTCCAAAGATGATTTGGGCAAATGTAAATAGCCAAGAAGAAGTTTATGAATGTTTTTTGTTGTAATATTACTAGGAATATATGCAATATGAGAAGCCACTTCTCTCTTTTATTACATCCATCAATAGATTGAGTAAATGATTTCTTTGAAATTTCTATGCAAAAATCGAGATTTTTCTCTTCCCCTTTGTAATTTGATTCAAAGCATTAAGGATGAAATTTGTAACTAATGTTAGAATTATGTGAGAAAAATTATGGGAGTGCTTGATGTGGTTGGGTCACGCTATGAGTCTGCTACTTATTTATAGTTTTTTCATTGGTTATGTATAGCAAAGTTATATATGATACATGAGGTATAGTAAACAACTGTGTATAGTAAAAGATTATATCTGGTAAAGTTATAGATGATAGATAGTTATACGTAATAGATGACTATAGCTGGTAAAGCTCTATATACTAAATTAAACCATATATATACCCATTAGATTGTGGTTTGAAAATAAACTTTATGTATTCTTTGTAATTTCCATTCTTGTACATACTTGAAGTCATGAATATAAATTTCTAACGAATATTCCTCCTTGCATTTTCTATCTCCTATTTTTTGTGTTCATGTAGATCGAGTGTGTGTTGTTGCGCGATCCTAACAACAAGTACCAGAGCTAAGCAAAATTCACCACGATCTCTAAAAAAGGAAAGGTCAAAGATTGGAACTGAAAAGTTCGATGGATTTGATTTCAATTTCTAGAAGATGTAGATTGAAGATTACCTGTATAATAAAAATCTTCACGAACCCCTGTTCGGGGTGAAACCGGATACCATGACCACAGAGTAGTGGAATCTCAAAAATCGAAAGGCCCAGGGCTGATATTATTGACATTCAACATTGTCAAGGAGAAGATAATGTTGGATTTGTTAAAAGCTTTGTCGAATATGTATGAAAAAACAAGAGAGGAAACAGAATCACAAATCTGGAGATGATGATGGTTCTGTAAATTCAACCGAAGACATTAAGGATGCTCTAATTCTTAGTGTGGACAGCCTAACTGAATCCTAAATTTTAGATTTGGGTGCATCATTTCATTCGTCTCCAAGTAAGAATTGTTTCAAAACTTCAAATAATAAAATTTTGGGAAGGTGTATCTTGCCGAAAATAAAACCTTGGAGATTGAAGGGAATGAAGATGTTTGCATACAAACTCTAGTAGGAAATTAGTGGACATTAGAAGATGTCAGATATATTTTTGGTCTCAATAAAAACTTGATCTCTATTGGTTAATTGGATATCATAGATTATGCAATAGAGTTTTGGGAAGAGTTCGTGCAAGATTGTGAAGGATATCATAGTGATAGCACGTGACACAAAATCTGGAACCTTATACATCATTGCAGGATGTATAAATATGGTTCCTGTAGCTCAGAGTGATTCCAATTCAAGTTTATAGCATAATACACTTGGACATGTGAGCATCAAATGACTGAAGATGTTGATTGCGAAAGAAGTTTTAGAAAACCTGAAGTTTGTTGATATGGGTCTTTATGAGAGCTGTGTTATGGGCAAACAGAAACGAGTTAATTTCATAAAGGCTGCTAGAGAACCGAAGAAAGCGTGGTTGGAAATGATGTTTGGGGACCTTCTCTAGTTTTATCACTTGGTGGATCAAAGTTTTACGTTACCTTCATTGATGATTTCAGCAAGAAGATACGGATTTATTTTTTGAAACATAAGTCAGATGTGTTTGTTACTTTCAAAAAGTTAAAAATTGAAGTTGAAAATAAAACCGACTTGAAATCAAATGTCTGGGGTCTGACAATGGATAAAAGTACAAGTCAAAACATAAAACATTTTGTGCAACCGAATGAATTAGATTAATGAGAACAGTTCTAGGTAAGGCAAAGACAAAATGATATTACAAAAAAGATGAACAGAACATTGAATGTGCGGACAAGGAGCATGATGATTCATTTTGGACTACCAAAGACATTATGGGCGGCTGCTGCTGTGAATACGCCAGCCTATTTGATCAATAGAGGACTCTCAGTGCCCTTGGAGTTTAAATTTCCAGAAGAGGAAAAGAAGTCAATTATTCTCACTTGAGAAGTTTTGGTTGCATTGCGTATGTTCACGATGATCTAGAGAAAAAAAGACAAGCTTGATGCTAAGGTTATGAAGTGTTACTTCATAGGCTATGGTTTTGACATGTTCGGGTATATGTTTAGGAATGACAAGAACAGAAAAACTCTAAGACATTGTAACGTGATCTTTGATGAAAATGTCTTGTACAAAAACAAAAAGAAGATAGGTTCTGAGACTTCGAAACAAGTGGGAGTTAAGCTTGAGTTGTAGAAAAATTTACTCAATGATATTATAGCAGAAACACAAGAAACTCCTAAAACTGTTGCTGAAGAACCATATGTGGAGTAAGTGATACCTGAGCATGTATTGAGGAGATTATCCAAAACTATCAGAGCATCGAATAGATATTCACATCATCACCCATCATAGCTTATTGTAACCTAGTATAACATAGCATAGCATGACTTATCATAGTTTAACGTATCATATCATAACATAACATCGCATTGCATAACATAACATCACATAGCATAACATAACATAACATTTAAGCATATGACACATGTAGGGTCCACGAAGCACGTATCATAATACGTAAGACAATTTTTTCAACCAAACTAATAGTGGAACCATTTACTTGGTTGGCTTGAGTCGAACCAGCTCGATAATCCTAAAAATGATTTGAGGCGCCCCTTATCCTTCACTCTAACCTATATTTCCCCACAAGATTATATCACGACATGACATGGACATAGTTAAAAGTATCCCATAAATTAACTTTATAGCTAAAAAAAACTTAATTTAAGCCATTTGGGTGTTAAATTGCGCTCTTCTCACGAGGTTAAACAGCTTCGAAAGGGTAAACAATGTAGAAAATGGTACCAAACAATGTAACCCGAGCTGGTAAACTGGATGGGAGCCGATACCAAACTTGCTCACACATGAGGAATGGCTCGTATGGACGAAAAAGAAATATGCGATTGATTCTTCTTTTTTAGCTTCGAAGGGACACGACAGCTACAATAAAGAAAGCAAAGGTCGTGGTTGCGGACATGGTGACAAAGGAGGTTGTAAAATTATCTCACAAACTCATGACGATGCCAACCACTGGAAAGACAAGAGCATGATGAAGTGTTACTCTTGTGGAGAATACGTGCATTATATAGTGGAGTGTCGCAACAAGAAAGCGGGATGATGAGGCAAACCTCACATTCACGCATGACGAAGAGCCCGTACTGGTGTTAGCCGAGAGGATGCCCAACCTATTTATGCTCAATGAAGAGAATGTTATGACGAACCTCCTCGCAAACAGAGAAGATCGAGGGAGACCAACATGTGGTATCTAGACAATGGAGCGAGCAACCACATGACCAAAGATCGAGCAAAGTTCAAGGAGCTTGATAAGAAGCTCATTGGAAATGTAAATTTTGGTAATGGATCAATTATACTTATCCAAGGCAAAGTATCTATCTTGTTCAAGTGCAAAAATAGTGATCAACGTCTCCTGACCAAGATATATTATATCTCTAGCTTGAAGAGTAATATTATCAGTCTTGGTCAAATGACCAAAGCAGAGTGGAGTTAATTAGGTCATTCCTTAAGATGTTCGACAGAAACGAAGCCTTATTGATGAAGGTAAATGGTTACAAAATTGCCTATATAAGATATTAATGAAGATTATCAATATCTTTTGGAAGCCTACATTAGCATTAGCATTAGCATTGGCGACAAGGAAGAGAAGAAGAAACCGAAGAACACAGCTAAGAACAAACTAGATGCTTCGAGCAAAGTCGGTGTGCTTCATCAGACTTATCACCTCAACCAAAGAGTCAACCAAAGAGACTAGAGGAAGGCGAGCAAGACCTAAGAAAAATGGGACATCCAACTTTTTGGAGTCGGACCTAAAAGAAACAAAAATTCAATGGTAAAATGGGCGCAATTCTGAGCATCTTACAGTATCTGCAACTTTGTTTTCAGGCCACTTTGTGGGCGTATTCTGAGCGTAGCTAGGCAGCACAAAAGCATAGAAACACATCAGATCCTTCCAAACTTCTCTTGTTTTTACTTGGATTTTCTCTGTTTGGTATTACTTAACATCAATAAACCCATAATTTCTCCACAATCTTAGTTTCAGATCTAAATGGTAAATGTGAATTATCAACTAATTCTTCCTAATTTATGTTTGAAAATCTGAGTTCTTGCGAGGCAAATCAAGTATATAGAACTTTTAGCTGTTCAACAGGTATAGTCTCTAGGAAACCTTGAACATAAGATCAAGTAAATATAAAGCATATTGTACAACACTATTTCCTGCAGTAGACAAGAAAGATCTATGGTCACCAAACTTCGATGCTGTTGCATTCGAGCATTCGAACCTGCAACGATCAACCGTTTCAGGATACTATAA

mRNA sequence

ATGAAGCAAACCCTAATTACTTCTTACAACACTCTTTTGGCTCCAAGAGTAAAGGCAGCTACGTTGCTTGAAACGAAAACTCGTGAACGATTGACTTGCAAAACTAGTCTCTTCATGTGGTGTAACCAATTGAGTATCTTACTTCAGAGAAATCTCAAAGAACGAAAACACGAGACCTTCAATGGCTTGAGATTTTTTCAAGTTATTGGCATATTTGGCTTTGAGACGCATCAAATAGATAGCCTAAATGAAGGAGAAGCTTGCATTGCATGCATTAGACAAGAAAGATCTATGGTCACCAAACTTCGATGCTGTTGCATTCGAGCATTCGAACCTGCAACGATCAACCGTTTCAGGATACTATAA

Coding sequence (CDS)

ATGAAGCAAACCCTAATTACTTCTTACAACACTCTTTTGGCTCCAAGAGTAAAGGCAGCTACGTTGCTTGAAACGAAAACTCGTGAACGATTGACTTGCAAAACTAGTCTCTTCATGTGGTGTAACCAATTGAGTATCTTACTTCAGAGAAATCTCAAAGAACGAAAACACGAGACCTTCAATGGCTTGAGATTTTTTCAAGTTATTGGCATATTTGGCTTTGAGACGCATCAAATAGATAGCCTAAATGAAGGAGAAGCTTGCATTGCATGCATTAGACAAGAAAGATCTATGGTCACCAAACTTCGATGCTGTTGCATTCGAGCATTCGAACCTGCAACGATCAACCGTTTCAGGATACTATAA

Protein sequence

MKQTLITSYNTLLAPRVKAATLLETKTRERLTCKTSLFMWCNQLSILLQRNLKERKHETFNGLRFFQVIGIFGFETHQIDSLNEGEACIACIRQERSMVTKLRCCCIRAFEPATINRFRIL

Homology

[Close]

BLAST of Carg23299 vs. NCBI nr
Match: XP_022936361.1 (ABC transporter G family member 25-like [Cucurbita moschata])

HSP 1 Score: 126.3 bits (316), Expect = 6.9e-26
Identity = 67/74 (90.54%), Postives = 67/74 (90.54%), Query Frame = 0


Query: 1   MKQTLITSYNTLLAPRVKAA-----TLLETKTRERLTCKTSLFMWCNQLSILLQRNLKER 60
           MKQTLITSYNTLLAPRVKAA     TLLETKTRERLTCKTSL MWCNQLSILLQRNLKER
Sbjct: 322 MKQTLITSYNTLLAPRVKAACMETSTLLETKTRERLTCKTSLLMWCNQLSILLQRNLKER 381

Query: 61  KHETFNGLRFFQVI 70
           KHETFNGLR FQVI
Sbjct: 382 KHETFNGLRVFQVI 395

[Close]

BLAST of Carg23299 vs. NCBI nr
Match: XP_023535221.1 (ABC transporter G family member 25-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 126.3 bits (316), Expect = 6.9e-26
Identity = 67/74 (90.54%), Postives = 67/74 (90.54%), Query Frame = 0


Query: 1   MKQTLITSYNTLLAPRVKAA-----TLLETKTRERLTCKTSLFMWCNQLSILLQRNLKER 60
           MKQTLITSYNTLLAPRVKAA     TLLETKTRERLTCKTSL MWCNQLSILLQRNLKER
Sbjct: 322 MKQTLITSYNTLLAPRVKAACMETSTLLETKTRERLTCKTSLLMWCNQLSILLQRNLKER 381

Query: 61  KHETFNGLRFFQVI 70
           KHETFNGLR FQVI
Sbjct: 382 KHETFNGLRVFQVI 395

[Close]

BLAST of Carg23299 vs. NCBI nr
Match: XP_022976378.1 (ABC transporter G family member 25-like [Cucurbita maxima])

HSP 1 Score: 122.1 bits (305), Expect = 1.3e-24
Identity = 66/74 (89.19%), Postives = 66/74 (89.19%), Query Frame = 0


Query: 1   MKQTLITSYNTLLAPRVKAA-----TLLETKTRERLTCKTSLFMWCNQLSILLQRNLKER 60
           MKQTLITSYNTLLAPRVKAA     TLLETKTRERLT KTSL MWCNQLSILLQRNLKER
Sbjct: 322 MKQTLITSYNTLLAPRVKAACMETSTLLETKTRERLTYKTSLLMWCNQLSILLQRNLKER 381

Query: 61  KHETFNGLRFFQVI 70
           KHETFNGLR FQVI
Sbjct: 382 KHETFNGLRVFQVI 395

[Close]

BLAST of Carg23299 vs. NCBI nr
Match: XP_022981414.1 (ABC transporter G family member 25-like [Cucurbita maxima])

HSP 1 Score: 102.1 bits (253), Expect = 1.4e-18
Identity = 56/77 (72.73%), Postives = 61/77 (79.22%), Query Frame = 0


Query: 1   MKQTLITSYNTLLAPRVKAATLLETKTRERL--------TCKTSLFMWCNQLSILLQRNL 60
           +KQTLITSYNTLLAPRVKAA  +ET T+E +        TCKTSL +WC QLSILLQRNL
Sbjct: 310 IKQTLITSYNTLLAPRVKAA-CMETSTKETMSGEWKSTRTCKTSLILWCYQLSILLQRNL 369

Query: 61  KERKHETFNGLRFFQVI 70
           KERKHETFN LR FQVI
Sbjct: 370 KERKHETFNALRVFQVI 385

[Close]

BLAST of Carg23299 vs. NCBI nr
Match: XP_022926174.1 (ABC transporter G family member 25-like [Cucurbita moschata])

HSP 1 Score: 100.9 bits (250), Expect = 3.1e-18
Identity = 55/77 (71.43%), Postives = 61/77 (79.22%), Query Frame = 0


Query: 1   MKQTLITSYNTLLAPRVKAATLLETKTRERL--------TCKTSLFMWCNQLSILLQRNL 60
           +KQTLITSYNTLLAPRVKAA  +ET T+E +        TCKTSL +WC QL+ILLQRNL
Sbjct: 310 IKQTLITSYNTLLAPRVKAA-CMETSTKETMSGERKSTRTCKTSLILWCYQLNILLQRNL 369

Query: 61  KERKHETFNGLRFFQVI 70
           KERKHETFN LR FQVI
Sbjct: 370 KERKHETFNALRVFQVI 385

[Close]

BLAST of Carg23299 vs. TAIR10
Match: AT1G71960.1 (ATP-binding casette family G25)

HSP 1 Score: 55.1 bits (131), Expect = 3.6e-08
Identity = 35/79 (44.30%), Postives = 48/79 (60.76%), Query Frame = 0


Query: 1   MKQTLITSYNTLLAPRVKAATLLE---------TKTR-ERLTCKTSLFMWCNQLSILLQR 60
           ++QTL+T+Y+TLLAP+VK    +           KTR       T +  W +QL ILL R
Sbjct: 337 VRQTLVTAYDTLLAPQVKTCIEVSHFPQDNARFVKTRVNGGGITTCIATWFSQLCILLHR 396

Query: 61  NLKERKHETFNGLRFFQVI 70
            LKER+HE+F+ LR FQV+
Sbjct: 397 LLKERRHESFDLLRIFQVV 415

[Close]

BLAST of Carg23299 vs. TAIR10
Match: AT3G25620.2 (ABC-2 type transporter family protein)

HSP 1 Score: 50.4 bits (119), Expect = 8.8e-07
Identity = 32/78 (41.03%), Postives = 45/78 (57.69%), Query Frame = 0


Query: 1   MKQTLITSYNTLLAPRVK---AATLLETKTRERLTCKTSL----FMWCNQLSILLQRNLK 60
           +KQ+LI+SY   L P +K   + T  + +T  RL  K         W  Q S+LL+R LK
Sbjct: 363 VKQSLISSYKKNLYPPLKEEVSRTFPQDQTNARLRKKAITNRWPTSWWMQFSVLLKRGLK 422

Query: 61  ERKHETFNGLRFFQVIGI 72
           ER HE+F+GLR F V+ +
Sbjct: 423 ERSHESFSGLRIFMVMSV 440

[Close]

BLAST of Carg23299 vs. TAIR10
Match: AT1G31770.1 (ATP-binding cassette 14)

HSP 1 Score: 42.0 bits (97), Expect = 3.1e-04
Identity = 26/79 (32.91%), Postives = 45/79 (56.96%), Query Frame = 0


Query: 1   MKQTLITSYNTLLAPRVKAATL-LETKTRE-------RLTCKTSLFMWCNQLSILLQRNL 60
           +K+TL+++Y   ++ ++KA     E+ + E        L  +     W  Q ++LLQR +
Sbjct: 335 VKETLVSAYEKNISTKLKAELCNAESHSYEYTKAAAKNLKSEQWCTTWWYQFTVLLQRGV 394

Query: 61  KERKHETFNGLRFFQVIGI 72
           +ER+ E+FN LR FQVI +
Sbjct: 395 RERRFESFNKLRIFQVISV 413

[Close]

BLAST of Carg23299 vs. Swiss-Prot
Match: sp|Q84TH5|AB25G_ARATH (ABC transporter G family member 25 OS=Arabidopsis thaliana OX=3702 GN=ABCG25 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.4e-07
Identity = 35/79 (44.30%), Postives = 48/79 (60.76%), Query Frame = 0


Query: 1   MKQTLITSYNTLLAPRVKAATLLE---------TKTR-ERLTCKTSLFMWCNQLSILLQR 60
           ++QTL+T+Y+TLLAP+VK    +           KTR       T +  W +QL ILL R
Sbjct: 337 VRQTLVTAYDTLLAPQVKTCIEVSHFPQDNARFVKTRVNGGGITTCIATWFSQLCILLHR 396

Query: 61  NLKERKHETFNGLRFFQVI 70
            LKER+HE+F+ LR FQV+
Sbjct: 397 LLKERRHESFDLLRIFQVV 415

[Close]

BLAST of Carg23299 vs. Swiss-Prot
Match: sp|Q7XA72|AB21G_ARATH (ABC transporter G family member 21 OS=Arabidopsis thaliana OX=3702 GN=ABCG21 PE=2 SV=2)

HSP 1 Score: 50.4 bits (119), Expect = 1.6e-05
Identity = 32/78 (41.03%), Postives = 45/78 (57.69%), Query Frame = 0


Query: 1   MKQTLITSYNTLLAPRVK---AATLLETKTRERLTCKTSL----FMWCNQLSILLQRNLK 60
           +KQ+LI+SY   L P +K   + T  + +T  RL  K         W  Q S+LL+R LK
Sbjct: 363 VKQSLISSYKKNLYPPLKEEVSRTFPQDQTNARLRKKAITNRWPTSWWMQFSVLLKRGLK 422

Query: 61  ERKHETFNGLRFFQVIGI 72
           ER HE+F+GLR F V+ +
Sbjct: 423 ERSHESFSGLRIFMVMSV 440

[Close]

BLAST of Carg23299 vs. TrEMBL
Match: tr|A0A0A0K4U8|A0A0A0K4U8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G307400 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.7e-18
Identity = 57/78 (73.08%), Postives = 61/78 (78.21%), Query Frame = 0


Query: 1   MKQTLITSYNTLLAPRVKAA-----TLLETKTRERL----TCKTSLFMWCNQLSILLQRN 60
           MKQTLITSYNTLLAPRVKAA      +LET TRE+     T K S+ +WCNQLSILLQRN
Sbjct: 325 MKQTLITSYNTLLAPRVKAACMETSMMLETMTREQKSSTNTWKASVLLWCNQLSILLQRN 384

Query: 61  LKERKHETFNGLRFFQVI 70
           LKERKHETFN LR FQVI
Sbjct: 385 LKERKHETFNALRVFQVI 402

[Close]

BLAST of Carg23299 vs. TrEMBL
Match: tr|A0A1S3CGA3|A0A1S3CGA3_CUCME (ABC transporter G family member 25 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500408 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 6.0e-18
Identity = 58/78 (74.36%), Postives = 59/78 (75.64%), Query Frame = 0


Query: 1   MKQTLITSYNTLLAPRVKAA-----TLLETKTRERL----TCKTSLFMWCNQLSILLQRN 60
           MKQTLI SYNTLLAPRVKAA      LLET  RER     T KTS+  WCNQLSILLQRN
Sbjct: 326 MKQTLINSYNTLLAPRVKAACMETSMLLETMARERKSSTNTWKTSVVSWCNQLSILLQRN 385

Query: 61  LKERKHETFNGLRFFQVI 70
           LKERKHETFN LR FQVI
Sbjct: 386 LKERKHETFNALRVFQVI 403

[Close]

BLAST of Carg23299 vs. TrEMBL
Match: tr|A0A1S4E3I9|A0A1S4E3I9_CUCME (ABC transporter G family member 25 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500408 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 6.0e-18
Identity = 58/78 (74.36%), Postives = 59/78 (75.64%), Query Frame = 0


Query: 1   MKQTLITSYNTLLAPRVKAA-----TLLETKTRERL----TCKTSLFMWCNQLSILLQRN 60
           MKQTLI SYNTLLAPRVKAA      LLET  RER     T KTS+  WCNQLSILLQRN
Sbjct: 284 MKQTLINSYNTLLAPRVKAACMETSMLLETMARERKSSTNTWKTSVVSWCNQLSILLQRN 343

Query: 61  LKERKHETFNGLRFFQVI 70
           LKERKHETFN LR FQVI
Sbjct: 344 LKERKHETFNALRVFQVI 361

[Close]

BLAST of Carg23299 vs. TrEMBL
Match: tr|A0A2G9GB63|A0A2G9GB63_9LAMI (Transporter, ABC superfamily (Breast cancer resistance protein) OS=Handroanthus impetiginosus OX=429701 GN=CDL12_24955 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.8e-12
Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = 0


Query: 1   MKQTLITSYNTLLAPRVKAA------------TLLETKTRERLTCKTSLFMWCNQLSILL 60
           ++QTL++SYN +LAP+VK+A            T++  +T +R  C + L  W NQ +ILL
Sbjct: 337 VRQTLVSSYNNVLAPKVKSACMDAQNTVARERTIVGNRTTKRYKCMSCLSTWLNQFTILL 396

Query: 61  QRNLKERKHETFNGLRFFQVI 70
           QRNLKERKHETFN LR FQVI
Sbjct: 397 QRNLKERKHETFNSLRVFQVI 417

[Close]

BLAST of Carg23299 vs. TrEMBL
Match: tr|A0A2G9G9S5|A0A2G9G9S5_9LAMI (Transporter, ABC superfamily (Breast cancer resistance protein) OS=Handroanthus impetiginosus OX=429701 GN=CDL12_25777 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.8e-12
Identity = 42/81 (51.85%), Postives = 55/81 (67.90%), Query Frame = 0


Query: 1   MKQTLITSYNTLLAPRVKAA------------TLLETKTRERLTCKTSLFMWCNQLSILL 60
           ++QTL++SYN +LAP+VK+A            T++  +T +R  C + L  W NQ +ILL
Sbjct: 337 VRQTLVSSYNNVLAPKVKSACMDAQNTVARERTIVGNRTTKRYKCMSCLSTWLNQFTILL 396

Query: 61  QRNLKERKHETFNGLRFFQVI 70
           QRNLKERKHETFN LR FQVI
Sbjct: 397 QRNLKERKHETFNSLRVFQVI 417

The following BLAST results are available for this feature:

BLAST of Carg23299 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936361.1	6.9e-26	90.54	ABC transporter G family member 25-like [Cucurbita moschata]	[more]
XP_023535221.1	6.9e-26	90.54	ABC transporter G family member 25-like [Cucurbita pepo subsp. pepo]	[more]
XP_022976378.1	1.3e-24	89.19	ABC transporter G family member 25-like [Cucurbita maxima]	[more]
XP_022981414.1	1.4e-18	72.73	ABC transporter G family member 25-like [Cucurbita maxima]	[more]
XP_022926174.1	3.1e-18	71.43	ABC transporter G family member 25-like [Cucurbita moschata]	[more]

BLAST of Carg23299 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G71960.1	3.6e-08	44.30	ATP-binding casette family G25	[more]
AT3G25620.2	8.8e-07	41.03	ABC-2 type transporter family protein	[more]
AT1G31770.1	3.1e-04	32.91	ATP-binding cassette 14	[more]

BLAST of Carg23299 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q84TH5\|AB25G_ARATH	6.4e-07	44.30	ABC transporter G family member 25 OS=Arabidopsis thaliana OX=3702 GN=ABCG25 PE=...	[more]
sp\|Q7XA72\|AB21G_ARATH	1.6e-05	41.03	ABC transporter G family member 21 OS=Arabidopsis thaliana OX=3702 GN=ABCG21 PE=...	[more]

BLAST of Carg23299 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K4U8\|A0A0A0K4U8_CUCSA	2.7e-18	73.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G307400 PE=4 SV=1	[more]
tr\|A0A1S3CGA3\|A0A1S3CGA3_CUCME	6.0e-18	74.36	ABC transporter G family member 25 isoform X1 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
tr\|A0A1S4E3I9\|A0A1S4E3I9_CUCME	6.0e-18	74.36	ABC transporter G family member 25 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1035...	[more]
tr\|A0A2G9GB63\|A0A2G9GB63_9LAMI	3.8e-12	51.85	Transporter, ABC superfamily (Breast cancer resistance protein) OS=Handroanthus ...	[more]
tr\|A0A2G9G9S5\|A0A2G9G9S5_9LAMI	3.8e-12	51.85	Transporter, ABC superfamily (Breast cancer resistance protein) OS=Handroanthus ...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23299-RA	Carg23299-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR19241:SF225	ABC TRANSPORTER G FAMILY MEMBER 25	coord: 1..69
None	No IPR available	PANTHER	PTHR19241	ATP-BINDING CASSETTE TRANSPORTER	coord: 1..69

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23299	Cla97C09G172820	Watermelon (97103) v2	carwmbB0284
Carg23299	Bhi09G001275	Wax gourd	carwgoB0360

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23299	Cucumber (Gy14) v2	carcgybB0290
Carg23299	Cucumber (Gy14) v2	carcgybB0291
Carg23299	Cucumber (Gy14) v1	carcgyB0324
Carg23299	Cucurbita maxima (Rimu)	carcmaB0382
Carg23299	Cucurbita maxima (Rimu)	carcmaB0384
Carg23299	Cucurbita moschata (Rifu)	carcmoB0382
Carg23299	Cucurbita moschata (Rifu)	carcmoB0380
Carg23299	Cucurbita pepo (Zucchini)	carcpeB0388
Carg23299	Cucurbita pepo (Zucchini)	carcpeB0386
Carg23299	Wild cucumber (PI 183967)	carcpiB0307
Carg23299	Cucumber (Chinese Long) v2	carcuB0303
Carg23299	Cucumber (Chinese Long) v3	carcucB0306
Carg23299	Bottle gourd (USVL1VR-Ls)	carlsiB248
Carg23299	Melon (DHL92) v3.5.1	carmeB0276
Carg23299	Melon (DHL92) v3.6.1	carmedB0288
Carg23299	Watermelon (Charleston Gray)	carwcgB0267
Carg23299	Watermelon (97103) v1	carwmB0266