Carg23287 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23287
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Dormancy/auxin associated protein
Location	Cucurbita_argyrosperma_scaffold_231 : 198417 .. 201220 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTTCCCCACTGCCGCTTCTAAGCTCTTCAATATCGAGAACCGCCGCTTTCTCCGCTTCCTCCGCCGTGACGGAACTTTAGCCGTTTCTTCTCTTCTTCTTCGATTTCCTGTTCATTATGGGCTTACTTGACCAGCTTTGGGACGATACCGTCGCTGGACCCCGGCCAGATAGTGGCCTTGGCAAGCTTCGTAAACACTCCACGTTTACCGGGCGAAATAGCTCCGGCAGCAAGGGTACGCTATGGATATTTTTATTCCACTGCTTGCCATAGCGAACACGTCGTCGAACTCGATAAACTTCAACTTGAAACCCTAATTTTAAGCTCAATAACGGAATATTGAGTATTCGATTGATTTTTCTAGGTTAAAAGTGGTTTAAACTGTAGGCTGATGATCGAATTGAGATTCTATTTTTTTTTTTAAATTTCTTAATAAAAACCTACCGTTGATTTTGCTTGAGAAATAGCCAGCAGCTCGGATTTGTCTCGCAATTTGACAGGATCTGTACCTTTGAACTGAAAAAGATGCTCAATCGATACCTTGAACTTCATAAAATCATAGTTTCTGTGTTGACTATTCTTTTTTCTTGATTTTTTATTGAACTCTTTTTGGATCAGAGCTCGATGGCGGCAGCGCGAGATCGTACGGCGAAGAATCTTCACAATCGTCGGTGAGGATCACGAGGAGTATCATGATACTAAGGCCGCCAGGGTACCAGTCTGGTTCGCCGCCTATTTCACCGGCTGGATCTAGTTCTCCGGCATCGCCTTTTTCTGGTAAGTAACAGAGACGTCTTTTTTGCACTTTCCTCTTTATGCGAAATTACCAATATGCCCTTCATGTAGAAGCCAAATGCACTTTTATCTTTCAATACAAGTTGGAATAAAATTACACGAGGGGGGGTTTTTTGTCCTTTGGTTATGGCGTCGCCTTCATGATTGGACAGGCACAGAAAACGGTAGTTGTATTTGGTGAAAAGATATGGTTCTAATTAAACCTGGATTGAAGAGCATCCTTCCATTGAAAGTGCTTCTGTTCGTTTAAATTCGATTGCCATTGAATATTTAATCCATTGACCCACCGTATTTATGGGGTTTCATTAGCAGTTTTCAGTTCAATCGTTTTCAAATTCATTGCATACTTCTCTTCTTGTGGACATAGTTATAGACTATTCTCCTGTTTTGTGGAGGTTGTTTGCCTTGCTCGTTGGTTGGCAGATCTTTGTCAAACAAGTAGAAGTATTTCGTGTGGTTCTGCTGATTTCTCATAAAAAGTTAAATGAAATAGGTGGGAATTGTGGTTTGGTTTGAAAACGTCGAGCTTACTTCATAAACATTCATGGTGGTCAAAGAAAAAATCTGGATCTTGTGAAATCATCATTGCAAACTTAATGTTCATTGTTTCTCTGTTTCAAAACCCTTGCTGCTTAAGTTTTTGCTCTGATGGGTTGAGTTGAACGTTACTAAAATCATTTAGAAATACCAATTTGAGTATAGCTTAACTACTTAATCTTGAGGATTGTTGGGAGAGGAGTCCCATATTGGCTAATTAAGGGGTTGATTGTGGATTTATAAGTAAGGAACTTTGTCTTCATTGGTATGATGCCTTTTGAGAAAACCAAAAGTAAAATCACGAGAGCTTATGCTCAAAGTGGACAATATCATGCCATTGCGAAGCCTCGTATGTATCATTGTTGAACTAAAGAAGGATTGTTTAGAAATCGATTAGCAATAGAAAACTCTCACTAGAACGTTGTTTTGCTGTTGGGTTTGATGTTTCAAAGCTTGTTTTTAGTGGTCTTTTCCTGGATCGTTCGTCTTTCATATCGAAAATTGATTTAATCCGTTCTTGTTTCCTATGTCTCTGATTTCCATACCTCATAAATTGTATCATGAAACTGTAAATTCATTAGTAATCGATGCATATACTAATTCTTGATTTCCCATCTCTTAGTATCATCTTTCAACTTTGTGTTTATTTATAAGTAATTTCTCCCTTTTGGAGGTAGGGAGTCCTTCCGGTTTCGAAGAAGGTCGATCTCCGACACATACACAAAGGCAACCGATAGTGGACCCGGGAGCCCTTCTTCTCCTCACAACATGTGAGATCTAATAAGCTGAGCTCTCTTATTCCCTTTCAACAATGTTCTCCAAAACCTTCATATATTCGTGTAATCTTAGTGTATCGTAACGTGGCTGTAGTAGTATGCATGTGAATTCCGTATGAAGGGTATTAGAATAAGTCTTGTAGGAGGAAGAAGAAGCTAAAATCGAGGGAGATTATGGTAATTTCGAGTACGTAGACGAGGGTACTATTGTAAATTAGGTATCAATGTTGTTGGTTTTGTTAGTGGAATGTAAAAGGGAAGTTGTTCTTTTCATGTGGACCTTATCACTGATTGATTGATTCTCTTTGGTTTTCCATTGGACAGTGCTTTGGTTAATGCAAGACAGCCCTGTTTTCTTTGAATGGTTGCTACAAAGCACCAAATCAATGGCCTTGGACAGATGCTCTTTTCAGGTTTTAATGCCATTCCTTCAAGTGTTTTGCTTTTGGATTCTGTTAGGCCTTGGATTTAATTAAGTAAAAGTTGGGTGGTGGGCTAGTTCTTTATTAGTGAATGTTCGTGTCACCTCCGACCTTCCATGAACGTTTTAGAACGATACTTAAAGTAGAAATGCATTAGAGTATTAGAAGAAAAATTGACATAATAATGGCCAGAAAGTCTGAACGAATGATATTTAGTGTAATAGTCTAAGTCCACCGCTAGCGGATATTGTTCACTTTAGGTTTTTTCTTATA

mRNA sequence

ATCTTCCCCACTGCCGCTTCTAAGCTCTTCAATATCGAGAACCGCCGCTTTCTCCGCTTCCTCCGCCGTGACGGAACTTTAGCCGTTTCTTCTCTTCTTCTTCGATTTCCTGTTCATTATGGGCTTACTTGACCAGCTTTGGGACGATACCGTCGCTGGACCCCGGCCAGATAGTGGCCTTGGCAAGCTTCGTAAACACTCCACGTTTACCGGGCGAAATAGCTCCGGCAGCAAGGAGCTCGATGGCGGCAGCGCGAGATCGTACGGCGAAGAATCTTCACAATCGTCGGTGAGGATCACGAGGAGTATCATGATACTAAGGCCGCCAGGGTACCAGTCTGGTTCGCCGCCTATTTCACCGGCTGGATCTAGTTCTCCGGCATCGCCTTTTTCTGGTAGGGAGTCCTTCCGGTTTCGAAGAAGGTCGATCTCCGACACATACACAAAGGCAACCGATAGTGGACCCGGGAGCCCTTCTTCTCCTCACAACATGTGAGATCTAATAAGCTGAGCTCTCTTATTCCCTTTCAACAATGTTCTCCAAAACCTTCATATATTCGTGTAATCTTAGTGTATCGTAACGTGGCTGTAGTAGTATGCATGTGAATTCCGTATGAAGGGTATTAGAATAAGTCTTGTAGGAGGAAGAAGAAGCTAAAATCGAGGGAGATTATGGTAATTTCGAGTACGTAGACGAGGGTACTATTGTAAATTAGGTATCAATGTTGTTGGTTTTGTTAGTGGAATGTAAAAGGGAAGTTGTTCTTTTCATGTGGACCTTATCACTGATTGATTGATTCTCTTTGGTTTTCCATTGGACAGTGCTTTGGTTAATGCAAGACAGCCCTGTTTTCTTTGAATGGTTGCTACAAAGCACCAAATCAATGGCCTTGGACAGATGCTCTTTTCAGGTTTTAATGCCATTCCTTCAAGTGTTTTGCTTTTGGATTCTGTTAGGCCTTGGATTTAATTAAGTAAAAGTTGGGTGGTGGGCTAGTTCTTTATTAGTGAATGTTCGTGTCACCTCCGACCTTCCATGAACGTTTTAGAACGATACTTAAAGTAGAAATGCATTAGAGTATTAGAAGAAAAATTGACATAATAATGGCCAGAAAGTCTGAACGAATGATATTTAGTGTAATAGTCTAAGTCCACCGCTAGCGGATATTGTTCACTTTAGGTTTTTTCTTATA

Coding sequence (CDS)

ATGGGCTTACTTGACCAGCTTTGGGACGATACCGTCGCTGGACCCCGGCCAGATAGTGGCCTTGGCAAGCTTCGTAAACACTCCACGTTTACCGGGCGAAATAGCTCCGGCAGCAAGGAGCTCGATGGCGGCAGCGCGAGATCGTACGGCGAAGAATCTTCACAATCGTCGGTGAGGATCACGAGGAGTATCATGATACTAAGGCCGCCAGGGTACCAGTCTGGTTCGCCGCCTATTTCACCGGCTGGATCTAGTTCTCCGGCATCGCCTTTTTCTGGTAGGGAGTCCTTCCGGTTTCGAAGAAGGTCGATCTCCGACACATACACAAAGGCAACCGATAGTGGACCCGGGAGCCCTTCTTCTCCTCACAACATGTGA

Protein sequence

MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEESSQSSVRITRSIMILRPPGYQSGSPPISPAGSSSPASPFSGRESFRFRRRSISDTYTKATDSGPGSPSSPHNM

Homology

[Close]

BLAST of Carg23287 vs. NCBI nr
Match: XP_022937952.1 (dormancy-associated protein homolog 3 isoform X2 [Cucurbita moschata])

HSP 1 Score: 245.4 bits (625), Expect = 1.1e-61
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEESSQSSVRI 60
           MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEESSQSSVRI
Sbjct: 1   MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEESSQSSVRI 60

Query: 61  TRSIMILRPPGYQSGSPPISPAGSSSPASPFSGRESFRFRRRSISDTYTKATDSGPGSPS 120
           TRSIMILRPPGYQSGSPPISPAGSSSPASPFSGRESFRFRRRSISDTYTKATDSGPGSPS
Sbjct: 61  TRSIMILRPPGYQSGSPPISPAGSSSPASPFSGRESFRFRRRSISDTYTKATDSGPGSPS 120

Query: 121 SPHNM 126
           SPHNM
Sbjct: 121 SPHNM 125

[Close]

BLAST of Carg23287 vs. NCBI nr
Match: XP_023537709.1 (dormancy-associated protein homolog 3 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 243.8 bits (621), Expect = 3.1e-61
Identity = 124/125 (99.20%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEESSQSSVRI 60
           MGLLDQLWDDTVAGPRPDSGLGKLRKHSTF+GRNSSGSKELDGGSARSYGEESSQSSVRI
Sbjct: 1   MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFSGRNSSGSKELDGGSARSYGEESSQSSVRI 60

Query: 61  TRSIMILRPPGYQSGSPPISPAGSSSPASPFSGRESFRFRRRSISDTYTKATDSGPGSPS 120
           TRSIMILRPPGYQSGSPPISPAGSSSPASPFSGRESFRFRRRSISDTYTKATDSGPGSPS
Sbjct: 61  TRSIMILRPPGYQSGSPPISPAGSSSPASPFSGRESFRFRRRSISDTYTKATDSGPGSPS 120

Query: 121 SPHNM 126
           SPHNM
Sbjct: 121 SPHNM 125

[Close]

BLAST of Carg23287 vs. NCBI nr
Match: XP_022966007.1 (dormancy-associated protein homolog 3 isoform X2 [Cucurbita maxima])

HSP 1 Score: 241.9 bits (616), Expect = 1.2e-60
Identity = 123/125 (98.40%), Postives = 124/125 (99.20%), Query Frame = 0


Query: 1   MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEESSQSSVRI 60
           MGLLDQLWDDTVAGPRPDSGLGKLRKHSTF+GRNSSGSKELDGGSARSYGEESSQSSVRI
Sbjct: 1   MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFSGRNSSGSKELDGGSARSYGEESSQSSVRI 60

Query: 61  TRSIMILRPPGYQSGSPPISPAGSSSPASPFSGRESFRFRRRSISDTYTKATDSGPGSPS 120
           TRSIMILRPPGYQ GSPPISPAGSSSPASPFSGRESFRFRRRSISDTYTKATDSGPGSPS
Sbjct: 61  TRSIMILRPPGYQCGSPPISPAGSSSPASPFSGRESFRFRRRSISDTYTKATDSGPGSPS 120

Query: 121 SPHNM 126
           SPHNM
Sbjct: 121 SPHNM 125

[Close]

BLAST of Carg23287 vs. NCBI nr
Match: XP_008454082.1 (PREDICTED: dormancy-associated protein homolog 3 isoform X2 [Cucumis melo])

HSP 1 Score: 218.0 bits (554), Expect = 1.8e-53
Identity = 110/125 (88.00%), Postives = 118/125 (94.40%), Query Frame = 0


Query: 1   MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEESSQSSVRI 60
           MGLL+QLWDDTVAGPRP+SGLGKLRKHST +GR SSGSKELDGGSARSYGE+SS+S VRI
Sbjct: 1   MGLLEQLWDDTVAGPRPESGLGKLRKHSTSSGRPSSGSKELDGGSARSYGEDSSESPVRI 60

Query: 61  TRSIMILRPPGYQSGSPPISPAGSSSPASPFSGRESFRFRRRSISDTYTKATDSGPGSPS 120
           TRSIMI+RPPGYQ+GSPPISPAGSSSPASPFSGRESFRFRRRSIS+ YTK TD G GSPS
Sbjct: 61  TRSIMIVRPPGYQNGSPPISPAGSSSPASPFSGRESFRFRRRSISELYTKTTDGGSGSPS 120

Query: 121 SPHNM 126
           SPHNM
Sbjct: 121 SPHNM 125

[Close]

BLAST of Carg23287 vs. NCBI nr
Match: XP_011648844.1 (PREDICTED: uncharacterized protein LOC101210613 isoform X2 [Cucumis sativus] >KGN60960.1 hypothetical protein Csa_2G031190 [Cucumis sativus])

HSP 1 Score: 215.7 bits (548), Expect = 9.0e-53
Identity = 107/125 (85.60%), Postives = 118/125 (94.40%), Query Frame = 0


Query: 1   MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEESSQSSVRI 60
           MGLLDQLWDDT+AGPRP+SGLGKLRKHSTF+GR +SG+KELDGG ARSYGE+SS+S VRI
Sbjct: 1   MGLLDQLWDDTLAGPRPESGLGKLRKHSTFSGRPTSGNKELDGGRARSYGEDSSESPVRI 60

Query: 61  TRSIMILRPPGYQSGSPPISPAGSSSPASPFSGRESFRFRRRSISDTYTKATDSGPGSPS 120
           TRSIMI+RPPGYQ+GSPPISPAGSSSPASPFSGRESFRFRRRSIS+ YTK T+ G GSPS
Sbjct: 61  TRSIMIVRPPGYQNGSPPISPAGSSSPASPFSGRESFRFRRRSISEVYTKTTNGGSGSPS 120

Query: 121 SPHNM 126
           SPHNM
Sbjct: 121 SPHNM 125

[Close]

BLAST of Carg23287 vs. TAIR10
Match: AT1G56220.3 (Dormancy/auxin associated family protein)

HSP 1 Score: 140.2 bits (352), Expect = 8.7e-34
Identity = 78/140 (55.71%), Postives = 98/140 (70.00%), Query Frame = 0


Query: 1   MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEES-SQSSVR 60
           MGLLD LWDDTVAGPRP++GLGKLRKH TF+ R SSG+ + + GSARSYGE+S  + +V+
Sbjct: 1   MGLLDHLWDDTVAGPRPENGLGKLRKHHTFSFRPSSGNDQSEAGSARSYGEDSLPEEAVK 60

Query: 61  ITRSIMILRPPGYQSGSPPISPAGSSSPASPF-----------SGRESFRFRRRSISDTY 120
           +TRSIMI++PPGYQ  S P SPAGS+ P SP             G+E FRFRRRS SD +
Sbjct: 61  VTRSIMIIKPPGYQGSSAPASPAGSTPPLSPXXXXXXXXXANAGGKEPFRFRRRSTSDAF 120

Query: 121 TKA---TDSGPGSPSSPHNM 126
            KA   +++GP S    + M
Sbjct: 121 EKAAGGSETGPRSSPPTYGM 140

[Close]

BLAST of Carg23287 vs. TAIR10
Match: AT1G54070.1 (Dormancy/auxin associated family protein)

HSP 1 Score: 54.7 bits (130), Expect = 4.8e-08
Identity = 37/98 (37.76%), Postives = 49/98 (50.00%), Query Frame = 0


Query: 1  MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEESSQSSVRI 60
          MG L +LWD+TVAGP PD+GLGKLRKH + +   SS                 S SS ++
Sbjct: 1  MGFLHKLWDETVAGPTPDNGLGKLRKHDSLSTVRSS---------------PPSLSSDQV 60

Query: 61 TRSIMILRPPGYQSG------SPPISPAGSSSPASPFS 93
          TRSIM+ +      G       P      SS+P +P +
Sbjct: 61 TRSIMVTKGNNNVRGLRKLKMDPDSPTCSSSNPGTPLT 83

[Close]

BLAST of Carg23287 vs. TAIR10
Match: AT1G28330.5 (dormancy-associated protein-like 1)

HSP 1 Score: 47.0 bits (110), Expect = 1.0e-05
Identity = 20/29 (68.97%), Postives = 25/29 (86.21%), Query Frame = 0


Query: 1  MGLLDQLWDDTVAGPRPDSGLGKLRKHST 30
          M LL++LWDD VAGP+PD GLG+LRK +T
Sbjct: 1  MVLLEKLWDDVVAGPQPDRGLGRLRKITT 29

[Close]

BLAST of Carg23287 vs. TAIR10
Match: AT5G44300.1 (Dormancy/auxin associated family protein)

HSP 1 Score: 41.6 bits (96), Expect = 4.2e-04
Identity = 19/30 (63.33%), Postives = 24/30 (80.00%), Query Frame = 0


Query: 1  MGLLDQLWDDTVAGPRPDS-GLGKLRKHST 30
          MG+L+ LWDD VAGPRP++ G G LR+ ST
Sbjct: 1  MGVLENLWDDVVAGPRPEAGGRGHLRRIST 30

[Close]

BLAST of Carg23287 vs. Swiss-Prot
Match: sp|Q8LD26|DRMH3_ARATH (Dormancy-associated protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g56220 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 3.3e-30
Identity = 75/137 (54.74%), Postives = 94/137 (68.61%), Query Frame = 0


Query: 1   MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEES-SQSSVR 60
           MGLLD LWDDTVAGPRP++GLGKLRKH TF+ R SSG+ + + GSARSYGE+S  + +V+
Sbjct: 1   MGLLDHLWDDTVAGPRPENGLGKLRKHHTFSFRPSSGNDQSEAGSARSYGEDSLPEEAVK 60

Query: 61  ITRSIMILRPPGYQSGSPPISPAGSSSPASPF--------SGRESFRFRRRSISDTYTKA 120
           +TRSIMI++PPGYQ  S P SPAGS+ P SPF               FRRRS SD + KA
Sbjct: 61  VTRSIMIIKPPGYQGSSAPASPAGSTPPLSPFXXXXXXXXXXXXXXXFRRRSTSDAFEKA 120

Query: 121 ---TDSGPGSPSSPHNM 126
              +++GP S    + M
Sbjct: 121 AGGSETGPRSSPPTYGM 137

[Close]

BLAST of Carg23287 vs. Swiss-Prot
Match: sp|F4HV65|DRMH4_ARATH (Dormancy-associated protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g54070 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 8.6e-07
Identity = 37/98 (37.76%), Postives = 49/98 (50.00%), Query Frame = 0


Query: 1  MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEESSQSSVRI 60
          MG L +LWD+TVAGP PD+GLGKLRKH + +   SS                 S SS ++
Sbjct: 1  MGFLHKLWDETVAGPTPDNGLGKLRKHDSLSTVRSS---------------PPSLSSDQV 60

Query: 61 TRSIMILRPPGYQSG------SPPISPAGSSSPASPFS 93
          TRSIM+ +      G       P      SS+P +P +
Sbjct: 61 TRSIMVTKGNNNVRGLRKLKMDPDSPTCSSSNPGTPLT 83

[Close]

BLAST of Carg23287 vs. Swiss-Prot
Match: sp|B9DGG8|DRM1_ARATH (Dormancy-associated protein 1 OS=Arabidopsis thaliana OX=3702 GN=DRM1 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 1.8e-04
Identity = 20/29 (68.97%), Postives = 25/29 (86.21%), Query Frame = 0


Query: 1  MGLLDQLWDDTVAGPRPDSGLGKLRKHST 30
          M LL++LWDD VAGP+PD GLG+LRK +T
Sbjct: 1  MVLLEKLWDDVVAGPQPDRGLGRLRKITT 29

[Close]

BLAST of Carg23287 vs. Swiss-Prot
Match: sp|Q05349|12KD_FRAAN (Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa OX=3747 PE=2 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 8.9e-04
Identity = 19/26 (73.08%), Postives = 22/26 (84.62%), Query Frame = 0


Query: 1  MGLLDQLWDDTVAGPRPDSGLGKLRK 27
          M LLD+LWDD VAGP+P+ GLG LRK
Sbjct: 1  MVLLDKLWDDIVAGPQPERGLGMLRK 26

[Close]

BLAST of Carg23287 vs. TrEMBL
Match: tr|A0A1S3BYJ7|A0A1S3BYJ7_CUCME (dormancy-associated protein homolog 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103494595 PE=4 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.2e-53
Identity = 110/125 (88.00%), Postives = 118/125 (94.40%), Query Frame = 0


Query: 1   MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEESSQSSVRI 60
           MGLL+QLWDDTVAGPRP+SGLGKLRKHST +GR SSGSKELDGGSARSYGE+SS+S VRI
Sbjct: 1   MGLLEQLWDDTVAGPRPESGLGKLRKHSTSSGRPSSGSKELDGGSARSYGEDSSESPVRI 60

Query: 61  TRSIMILRPPGYQSGSPPISPAGSSSPASPFSGRESFRFRRRSISDTYTKATDSGPGSPS 120
           TRSIMI+RPPGYQ+GSPPISPAGSSSPASPFSGRESFRFRRRSIS+ YTK TD G GSPS
Sbjct: 61  TRSIMIVRPPGYQNGSPPISPAGSSSPASPFSGRESFRFRRRSISELYTKTTDGGSGSPS 120

Query: 121 SPHNM 126
           SPHNM
Sbjct: 121 SPHNM 125

[Close]

BLAST of Carg23287 vs. TrEMBL
Match: tr|A0A0A0LFX2|A0A0A0LFX2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G031190 PE=4 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 5.9e-53
Identity = 107/125 (85.60%), Postives = 118/125 (94.40%), Query Frame = 0


Query: 1   MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEESSQSSVRI 60
           MGLLDQLWDDT+AGPRP+SGLGKLRKHSTF+GR +SG+KELDGG ARSYGE+SS+S VRI
Sbjct: 1   MGLLDQLWDDTLAGPRPESGLGKLRKHSTFSGRPTSGNKELDGGRARSYGEDSSESPVRI 60

Query: 61  TRSIMILRPPGYQSGSPPISPAGSSSPASPFSGRESFRFRRRSISDTYTKATDSGPGSPS 120
           TRSIMI+RPPGYQ+GSPPISPAGSSSPASPFSGRESFRFRRRSIS+ YTK T+ G GSPS
Sbjct: 61  TRSIMIVRPPGYQNGSPPISPAGSSSPASPFSGRESFRFRRRSISEVYTKTTNGGSGSPS 120

Query: 121 SPHNM 126
           SPHNM
Sbjct: 121 SPHNM 125

[Close]

BLAST of Carg23287 vs. TrEMBL
Match: tr|A0A1R3K842|A0A1R3K842_9ROSI (Dormancyauxin associated OS=Corchorus olitorius OX=93759 GN=COLO4_10536 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.5e-43
Identity = 91/126 (72.22%), Postives = 109/126 (86.51%), Query Frame = 0


Query: 1   MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEESSQSSVRI 60
           MGLLDQLWDDTVAGPRPD+GLGKLRKHSTFT R +S +KE DGGS RSYG+E+S+ + R+
Sbjct: 1   MGLLDQLWDDTVAGPRPDNGLGKLRKHSTFTFRPNSSAKESDGGSVRSYGDETSEEATRV 60

Query: 61  TRSIMILRPPGYQSGSPPISPAGSSSPASPFS-GRESFRFRRRSISDTYTKATDSGPGSP 120
           TRSIMI++PPGYQSGSPP+SPAGS+ P SPFS GRE+FRFRRRS SD Y KA++ GP SP
Sbjct: 61  TRSIMIVKPPGYQSGSPPVSPAGSTPPVSPFSGGRETFRFRRRSTSDVYEKASEVGPRSP 120

Query: 121 SSPHNM 126
             P+++
Sbjct: 121 RPPYDV 126

[Close]

BLAST of Carg23287 vs. TrEMBL
Match: tr|A0A1R3JTA2|A0A1R3JTA2_COCAP (Dormancyauxin associated OS=Corchorus capsularis OX=210143 GN=CCACVL1_04332 PE=4 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 5.6e-43
Identity = 90/126 (71.43%), Postives = 109/126 (86.51%), Query Frame = 0


Query: 1   MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEESSQSSVRI 60
           MGLLDQLWDDTVAGPRPD+GLGKLRKHSTFT R +S +KE DGG+ RSYG+E+S+ + R+
Sbjct: 1   MGLLDQLWDDTVAGPRPDNGLGKLRKHSTFTFRPNSSAKESDGGTVRSYGDETSEEATRV 60

Query: 61  TRSIMILRPPGYQSGSPPISPAGSSSPASPFS-GRESFRFRRRSISDTYTKATDSGPGSP 120
           TRSIMI++PPGYQSGSPP+SPAGS+ P SPFS GRE+FRFRRRS SD Y KA++ GP SP
Sbjct: 61  TRSIMIVKPPGYQSGSPPVSPAGSTPPVSPFSGGRETFRFRRRSTSDAYEKASEVGPRSP 120

Query: 121 SSPHNM 126
             P+++
Sbjct: 121 RPPYDV 126

[Close]

BLAST of Carg23287 vs. TrEMBL
Match: tr|A0A061F398|A0A061F398_THECC (Drm3-like protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_026669 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 6.1e-42
Identity = 92/126 (73.02%), Postives = 108/126 (85.71%), Query Frame = 0


Query: 1   MGLLDQLWDDTVAGPRPDSGLGKLRKHSTFTGRNSSGSKELDGGSARSYGEESSQSSVRI 60
           MGLLDQLWDDTVAGPRPD+GLGKLRKHSTFT R SS +KE DGGS RSYG+E+S+   R+
Sbjct: 1   MGLLDQLWDDTVAGPRPDNGLGKLRKHSTFTFRPSS-AKESDGGSVRSYGDETSEEPTRV 60

Query: 61  TRSIMILRPPGYQSGSPPISPAGSSSPASPFS-GRESFRFRRRSISDTYTKATDSGPGSP 120
           TRSIMI++PPGYQ+GSPPISPAGS+ P SPFS GRESFRFRR+S SD Y KA++ GP SP
Sbjct: 61  TRSIMIVKPPGYQNGSPPISPAGSTPPVSPFSGGRESFRFRRKSTSDAYEKASEVGPRSP 120

Query: 121 SSPHNM 126
             P+++
Sbjct: 121 HPPYDV 125

The following BLAST results are available for this feature:

BLAST of Carg23287 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937952.1	1.1e-61	100.00	dormancy-associated protein homolog 3 isoform X2 [Cucurbita moschata]	[more]
XP_023537709.1	3.1e-61	99.20	dormancy-associated protein homolog 3 isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_022966007.1	1.2e-60	98.40	dormancy-associated protein homolog 3 isoform X2 [Cucurbita maxima]	[more]
XP_008454082.1	1.8e-53	88.00	PREDICTED: dormancy-associated protein homolog 3 isoform X2 [Cucumis melo]	[more]
XP_011648844.1	9.0e-53	85.60	PREDICTED: uncharacterized protein LOC101210613 isoform X2 [Cucumis sativus] >KG...	[more]

BLAST of Carg23287 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G56220.3	8.7e-34	55.71	Dormancy/auxin associated family protein	[more]
AT1G54070.1	4.8e-08	37.76	Dormancy/auxin associated family protein	[more]
AT1G28330.5	1.0e-05	68.97	dormancy-associated protein-like 1	[more]
AT5G44300.1	4.2e-04	63.33	Dormancy/auxin associated family protein	[more]

BLAST of Carg23287 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LD26\|DRMH3_ARATH	3.3e-30	54.74	Dormancy-associated protein homolog 3 OS=Arabidopsis thaliana OX=3702 GN=At1g562...	[more]
sp\|F4HV65\|DRMH4_ARATH	8.6e-07	37.76	Dormancy-associated protein homolog 4 OS=Arabidopsis thaliana OX=3702 GN=At1g540...	[more]
sp\|B9DGG8\|DRM1_ARATH	1.8e-04	68.97	Dormancy-associated protein 1 OS=Arabidopsis thaliana OX=3702 GN=DRM1 PE=1 SV=1	[more]
sp\|Q05349\|12KD_FRAAN	8.9e-04	73.08	Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa OX=3747 PE=2 SV=1	[more]

BLAST of Carg23287 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BYJ7\|A0A1S3BYJ7_CUCME	1.2e-53	88.00	dormancy-associated protein homolog 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A0A0LFX2\|A0A0A0LFX2_CUCSA	5.9e-53	85.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G031190 PE=4 SV=1	[more]
tr\|A0A1R3K842\|A0A1R3K842_9ROSI	2.5e-43	72.22	Dormancyauxin associated OS=Corchorus olitorius OX=93759 GN=COLO4_10536 PE=4 SV=...	[more]
tr\|A0A1R3JTA2\|A0A1R3JTA2_COCAP	5.6e-43	71.43	Dormancyauxin associated OS=Corchorus capsularis OX=210143 GN=CCACVL1_04332 PE=4...	[more]
tr\|A0A061F398\|A0A061F398_THECC	6.1e-42	73.02	Drm3-like protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_026669 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008406	DRM/ARP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23287-RA	Carg23287-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008406	Dormancy/auxin associated protein	PFAM	PF05564	Auxin_repressed	coord: 7..90 e-value: 4.6E-10 score: 40.1
IPR008406	Dormancy/auxin associated protein	PANTHER	PTHR33565	FAMILY NOT NAMED	coord: 1..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 28..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 108..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..125
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..92
None	No IPR available	PANTHER	PTHR33565:SF1	DORMANCY-ASSOCIATED PROTEIN HOMOLOG 3	coord: 1..125

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23287	Cla019927	Watermelon (97103) v1	carwmB0885
Carg23287	Csa2G031190	Cucumber (Chinese Long) v2	carcuB0896
Carg23287	MELO3C004219	Melon (DHL92) v3.5.1	carmeB0870
Carg23287	ClCG02G015400	Watermelon (Charleston Gray)	carwcgB0858
Carg23287	CSPI02G04330	Wild cucumber (PI 183967)	carcpiB0916
Carg23287	Cucsa.091030	Cucumber (Gy14) v1	carcgyB1002
Carg23287	CmaCh12G010550	Cucurbita maxima (Rimu)	carcmaB1221
Carg23287	CmoCh12G010670	Cucurbita moschata (Rifu)	carcmoB1190
Carg23287	Lsi11G005930	Bottle gourd (USVL1VR-Ls)	carlsiB801
Carg23287	Cp4.1LG07g08750	Cucurbita pepo (Zucchini)	carcpeB1230
Carg23287	CsGy2G004450	Cucumber (Gy14) v2	carcgybB0868
Carg23287	MELO3C004219.2	Melon (DHL92) v3.6.1	carmedB0879
Carg23287	CsaV3_2G006690	Cucumber (Chinese Long) v3	carcucB0920
Carg23287	Cla97C02G041160	Watermelon (97103) v2	carwmbB0921

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23287	Silver-seed gourd	carcarB522
Carg23287	Cucurbita maxima (Rimu)	carcmaB1222
Carg23287	Cucurbita moschata (Rifu)	carcmoB1191
Carg23287	Cucurbita pepo (Zucchini)	carcpeB1229
Carg23287	Wax gourd	carwgoB1029